ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal7e05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK103334.1| Oryza sativa (japonica cultivar-group) cDNA clon... 287 2e-74
2gb|AY575558.1| Oryza sativa (indica cultivar-group) cultivar IR6... 280 6e-72
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 250 5e-63
4gb|AC145491.1| Genomic sequence for Oryza sativa, Nipponbare str... 250 5e-63
5gb|AC118340.1| Genomic sequence for Oryza sativa, Nipponbare str... 250 5e-63
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 250 5e-63
7gb|AY108040.1| Zea mays PCO146975 mRNA sequence 242 1e-60
8gb|BT024047.1| Zea mays clone EL01N0431H10 mRNA sequence 226 7e-56
9dbj|AP006378.1| Lotus japonicus genomic DNA, chromosome 1, clone... 72 3e-09
10gb|AY110009.1| Zea mays CL57181_1 mRNA sequence 58 4e-05
11gb|AY448016.1|AY448010S7 Ipomoea trifida haplotype S1 self-incom... 56 2e-04
12dbj|AP006434.1| Lotus japonicus genomic DNA, chromosome 4, clone... 50 0.009
13gb|DQ487284.1| Populus sp. UG-2006 neutral invertase 6 mRNA, par... 46 0.15
14ref|NM_111456.3| Arabidopsis thaliana beta-fructofuranosidase AT... 44 0.57
15gb|AC012393.5|ATAC012393 Arabidopsis thaliana chromosome III BAC... 44 0.57
16gb|AC141113.5| Medicago truncatula clone mth2-7h7, complete sequ... 44 0.57
17gb|AC158737.14| Medicago truncatula clone mth2-154f20, complete ... 44 0.57
18gb|BT005695.1| Arabidopsis thaliana clone U50005 putative alkali... 44 0.57
19gb|BT004140.1| Arabidopsis thaliana clone RAFL15-37-K14 (R50005)... 44 0.57
20emb|AJ422050.1|BVU422050 Beta vulgaris mRNA for neutral invertas... 44 0.57
21dbj|AB083685.1| Nicotiana tabacum NtINV2 mRNA for invertase, par... 44 0.57
22gb|AY815233.1| Schistosoma japonicum SJCHGC07891 protein mRNA, c... 42 2.3
23emb|CR383666.7| Zebrafish DNA sequence from clone DKEY-30H2 in l... 42 2.3
24gb|AC115802.10| Mus musculus, clone RP23-408J7, complete sequence 42 2.3
25gb|AF259696.1| Ovis aries microsatellite MNS-22 sequence 42 2.3
26emb|CR381673.7| Zebrafish DNA sequence from clone CH211-209J3 in... 42 2.3
27emb|BX511304.5| Zebrafish DNA sequence from clone DKEYP-94G1 in ... 42 2.3
28gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome 40 9.0
29gb|AC122397.2| Mus musculus BAC clone RP24-90D21 from chromosome... 40 9.0
30gb|AC124012.4| Mus musculus BAC clone RP24-357P22 from chromosom... 40 9.0
31gb|AC122459.2| Mus musculus BAC clone RP24-273F21 from chromosom... 40 9.0
32emb|AL117376.28|HSDJ971B4 Human DNA sequence from clone RP5-971B... 40 9.0
33emb|AL845333.3| Mouse DNA sequence from clone RP23-245E19 on chr... 40 9.0
34gb|AC016113.9| Homo sapiens, clone RP11-26P22, complete sequence 40 9.0
35gb|AC090989.8| Homo sapiens chromosome 18, clone RP11-265C19, co... 40 9.0
36emb|BX005407.5| Zebrafish DNA sequence from clone CH211-222C22 i... 40 9.0
37gb|AF049880.1|AF049880 Mus musculus TGFb inducible early protein... 40 9.0
38emb|BX465221.7| Mouse DNA sequence from clone RP23-13E2 on chrom... 40 9.0
39emb|AJ937762.1| Uncultured gamma proteobacterium fosmid clone b1... 40 9.0
40dbj|AP006410.1| Lotus japonicus genomic DNA, chromosome 6, clone... 40 9.0
41dbj|AP004898.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 9.0

>dbj|AK103334.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125P15, full
            insert sequence
          Length = 2297

 Score =  287 bits (145), Expect = 2e-74
 Identities = 298/349 (85%)
 Strand = Plus / Minus

                                                                        
Query: 309  actacacaaggacttgagacctggctgcacgacgggagcatttgatacgagcgctgttgc 368
            |||||||||| || || ||||| || |||||||||||||||||| | || || || ||| 
Sbjct: 2016 actacacaagaacctgcgaccttgccgcacgacgggagcatttggttcgggcactcttgt 1957

                                                                        
Query: 369  tcaggccacaagcacagccctccagtagctcgagatcttcgtcacatattaatattgacg 428
            |||  |  || ||||| || ||||| |||||||||||||| ||||| || ||||| || |
Sbjct: 1956 tcacactgcatgcacacccttccagcagctcgagatcttcctcacaaatcaatatggatg 1897

                                                                        
Query: 429  ccatctctggacagtccagaagcattttagagctaagaaaccctgcgattgtccaagtct 488
            |||  ||||||||||| | ||||||||||||||||||  | ||||| || |||||||| |
Sbjct: 1896 ccaattctggacagtctaaaagcattttagagctaaggtatcctgcaatcgtccaagttt 1837

                                                                        
Query: 489  gatatagcctcgactgttttccaataaaccttcctgtcctggtgtcataatattctggcc 548
            |||||||||| ||||| || |||||||||||||||||||| |||||||||||||||||||
Sbjct: 1836 gatatagccttgactgcttcccaataaaccttcctgtccttgtgtcataatattctggcc 1777

                                                                        
Query: 549  acttgtcatctgagagcctcttttccacggcttcaacagctctccttgccaagtcaggcc 608
            ||||||| |||||||| ||||||||  || ||||||  |||| |  ||| |||||| |||
Sbjct: 1776 acttgtcctctgagagtctcttttctgcgacttcaatggctcgctgtgctaagtcacgcc 1717

                                                             
Query: 609  tacccatcttgatacaggctagggtgaactgccatagcaatgtaggcca 657
            |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1716 tacccatcttgatacaggctagagtgaactgccatagcaatgtaggcca 1668



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 40/46 (86%), Gaps = 4/46 (8%)
 Strand = Plus / Minus

                                                          
Query: 154  tatcgatggattaagggaccacaaacttgccaaaataaccggcata 199
            |||||||||||||    |||||||  ||||||||||||||||||||
Sbjct: 2162 tatcgatggatta----accacaagattgccaaaataaccggcata 2121



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>gb|AY575558.1| Oryza sativa (indica cultivar-group) cultivar IR64 neutral/alkaline
           invertase 1 mRNA, partial cds
          Length = 574

 Score =  280 bits (141), Expect = 6e-72
 Identities = 297/349 (85%)
 Strand = Plus / Minus

                                                                       
Query: 309 actacacaaggacttgagacctggctgcacgacgggagcatttgatacgagcgctgttgc 368
           |||||||||| || || ||||| || |||||||||||||||||| | || || || ||| 
Sbjct: 453 actacacaagaacctgcgaccttgccgcacgacgggagcatttggttcgggcactcttgt 394

                                                                       
Query: 369 tcaggccacaagcacagccctccagtagctcgagatcttcgtcacatattaatattgacg 428
           |||  |  || ||||| || ||||| |||||||||||||| ||||| || ||||| || |
Sbjct: 393 tcacactgcatgcacacccttccagcagctcgagatcttcctcacaaatcaatatggatg 334

                                                                       
Query: 429 ccatctctggacagtccagaagcattttagagctaagaaaccctgcgattgtccaagtct 488
           |||  ||||||||||| | ||||||||||||||||||  | ||||| || |||||||| |
Sbjct: 333 ccaattctggacagtctaaaagcattttagagctaaggtatcctgcaatcgtccaagttt 274

                                                                       
Query: 489 gatatagcctcgactgttttccaataaaccttcctgtcctggtgtcataatattctggcc 548
           |||||||||| ||||| || |||||||||||||||||||| |||||||||||||||||||
Sbjct: 273 gatatagccttgactgcttcccaataaaccttcctgtccttgtgtcataatattctggcc 214

                                                                       
Query: 549 acttgtcatctgagagcctcttttccacggcttcaacagctctccttgccaagtcaggcc 608
           ||||||| || ||||| ||||||||  || ||||||  |||| |  ||| |||||| |||
Sbjct: 213 acttgtcctcagagagtctcttttctgcgacttcaatggctcgctgtgctaagtcacgcc 154

                                                            
Query: 609 tacccatcttgatacaggctagggtgaactgccatagcaatgtaggcca 657
           |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 153 tacccatcttgatacaggctagagtgaactgccatagcaatgtaggcca 105



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  250 bits (126), Expect = 5e-63
 Identities = 279/330 (84%)
 Strand = Plus / Plus

                                                                            
Query: 309      actacacaaggacttgagacctggctgcacgacgggagcatttgatacgagcgctgttgc 368
                |||||||||| || || ||||| || |||||||||||||||||| | || || || ||| 
Sbjct: 11256749 actacacaagaacctgcgaccttgccgcacgacgggagcatttggttcgggcactcttgt 11256808

                                                                            
Query: 369      tcaggccacaagcacagccctccagtagctcgagatcttcgtcacatattaatattgacg 428
                |||  |  || ||||| || ||||| |||||||||||||| ||||| || ||||| || |
Sbjct: 11256809 tcacactgcatgcacacccttccagcagctcgagatcttcctcacaaatcaatatggatg 11256868

                                                                            
Query: 429      ccatctctggacagtccagaagcattttagagctaagaaaccctgcgattgtccaagtct 488
                |||  ||||||||||| | ||||||||||||||||||  | ||||| || |||||||| |
Sbjct: 11256869 ccaattctggacagtctaaaagcattttagagctaaggtatcctgcaatcgtccaagttt 11256928

                                                                            
Query: 489      gatatagcctcgactgttttccaataaaccttcctgtcctggtgtcataatattctggcc 548
                |||||||||| ||||| || |||||||||||||||||||| |||||||||||||||||||
Sbjct: 11256929 gatatagccttgactgcttcccaataaaccttcctgtccttgtgtcataatattctggcc 11256988

                                                                            
Query: 549      acttgtcatctgagagcctcttttccacggcttcaacagctctccttgccaagtcaggcc 608
                ||||||| |||||||| ||||||||  || ||||||  |||| |  ||| |||||| |||
Sbjct: 11256989 acttgtcctctgagagtctcttttctgcgacttcaatggctcgctgtgctaagtcacgcc 11257048

                                              
Query: 609      tacccatcttgatacaggctagggtgaact 638
                |||||||||||||||||||||| |||||||
Sbjct: 11257049 tacccatcttgatacaggctagagtgaact 11257078



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 637      ctgccatagcaatgtaggcca 657
                |||||||||||||||||||||
Sbjct: 11257173 ctgccatagcaatgtaggcca 11257193



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 40/46 (86%), Gaps = 4/46 (8%)
 Strand = Plus / Plus

                                                              
Query: 154      tatcgatggattaagggaccacaaacttgccaaaataaccggcata 199
                |||||||||||||    |||||||  ||||||||||||||||||||
Sbjct: 11256603 tatcgatggatta----accacaagattgccaaaataaccggcata 11256644



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>gb|AC145491.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNAb0085H08, from chromosome 3, complete sequence
          Length = 130656

 Score =  250 bits (126), Expect = 5e-63
 Identities = 279/330 (84%)
 Strand = Plus / Plus

                                                                         
Query: 309   actacacaaggacttgagacctggctgcacgacgggagcatttgatacgagcgctgttgc 368
             |||||||||| || || ||||| || |||||||||||||||||| | || || || ||| 
Sbjct: 35702 actacacaagaacctgcgaccttgccgcacgacgggagcatttggttcgggcactcttgt 35761

                                                                         
Query: 369   tcaggccacaagcacagccctccagtagctcgagatcttcgtcacatattaatattgacg 428
             |||  |  || ||||| || ||||| |||||||||||||| ||||| || ||||| || |
Sbjct: 35762 tcacactgcatgcacacccttccagcagctcgagatcttcctcacaaatcaatatggatg 35821

                                                                         
Query: 429   ccatctctggacagtccagaagcattttagagctaagaaaccctgcgattgtccaagtct 488
             |||  ||||||||||| | ||||||||||||||||||  | ||||| || |||||||| |
Sbjct: 35822 ccaattctggacagtctaaaagcattttagagctaaggtatcctgcaatcgtccaagttt 35881

                                                                         
Query: 489   gatatagcctcgactgttttccaataaaccttcctgtcctggtgtcataatattctggcc 548
             |||||||||| ||||| || |||||||||||||||||||| |||||||||||||||||||
Sbjct: 35882 gatatagccttgactgcttcccaataaaccttcctgtccttgtgtcataatattctggcc 35941

                                                                         
Query: 549   acttgtcatctgagagcctcttttccacggcttcaacagctctccttgccaagtcaggcc 608
             ||||||| |||||||| ||||||||  || ||||||  |||| |  ||| |||||| |||
Sbjct: 35942 acttgtcctctgagagtctcttttctgcgacttcaatggctcgctgtgctaagtcacgcc 36001

                                           
Query: 609   tacccatcttgatacaggctagggtgaact 638
             |||||||||||||||||||||| |||||||
Sbjct: 36002 tacccatcttgatacaggctagagtgaact 36031



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 637   ctgccatagcaatgtaggcca 657
             |||||||||||||||||||||
Sbjct: 36126 ctgccatagcaatgtaggcca 36146



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 40/46 (86%), Gaps = 4/46 (8%)
 Strand = Plus / Plus

                                                           
Query: 154   tatcgatggattaagggaccacaaacttgccaaaataaccggcata 199
             |||||||||||||    |||||||  ||||||||||||||||||||
Sbjct: 35556 tatcgatggatta----accacaagattgccaaaataaccggcata 35597



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>gb|AC118340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0085H08, from chromosome 3, complete sequence
          Length = 126708

 Score =  250 bits (126), Expect = 5e-63
 Identities = 279/330 (84%)
 Strand = Plus / Minus

                                                                         
Query: 309   actacacaaggacttgagacctggctgcacgacgggagcatttgatacgagcgctgttgc 368
             |||||||||| || || ||||| || |||||||||||||||||| | || || || ||| 
Sbjct: 24299 actacacaagaacctgcgaccttgccgcacgacgggagcatttggttcgggcactcttgt 24240

                                                                         
Query: 369   tcaggccacaagcacagccctccagtagctcgagatcttcgtcacatattaatattgacg 428
             |||  |  || ||||| || ||||| |||||||||||||| ||||| || ||||| || |
Sbjct: 24239 tcacactgcatgcacacccttccagcagctcgagatcttcctcacaaatcaatatggatg 24180

                                                                         
Query: 429   ccatctctggacagtccagaagcattttagagctaagaaaccctgcgattgtccaagtct 488
             |||  ||||||||||| | ||||||||||||||||||  | ||||| || |||||||| |
Sbjct: 24179 ccaattctggacagtctaaaagcattttagagctaaggtatcctgcaatcgtccaagttt 24120

                                                                         
Query: 489   gatatagcctcgactgttttccaataaaccttcctgtcctggtgtcataatattctggcc 548
             |||||||||| ||||| || |||||||||||||||||||| |||||||||||||||||||
Sbjct: 24119 gatatagccttgactgcttcccaataaaccttcctgtccttgtgtcataatattctggcc 24060

                                                                         
Query: 549   acttgtcatctgagagcctcttttccacggcttcaacagctctccttgccaagtcaggcc 608
             ||||||| |||||||| ||||||||  || ||||||  |||| |  ||| |||||| |||
Sbjct: 24059 acttgtcctctgagagtctcttttctgcgacttcaatggctcgctgtgctaagtcacgcc 24000

                                           
Query: 609   tacccatcttgatacaggctagggtgaact 638
             |||||||||||||||||||||| |||||||
Sbjct: 23999 tacccatcttgatacaggctagagtgaact 23970



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 40/46 (86%), Gaps = 4/46 (8%)
 Strand = Plus / Minus

                                                           
Query: 154   tatcgatggattaagggaccacaaacttgccaaaataaccggcata 199
             |||||||||||||    |||||||  ||||||||||||||||||||
Sbjct: 24445 tatcgatggatta----accacaagattgccaaaataaccggcata 24404



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 637   ctgccatagcaatgtaggcca 657
             |||||||||||||||||||||
Sbjct: 23875 ctgccatagcaatgtaggcca 23855



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  250 bits (126), Expect = 5e-63
 Identities = 279/330 (84%)
 Strand = Plus / Plus

                                                                            
Query: 309      actacacaaggacttgagacctggctgcacgacgggagcatttgatacgagcgctgttgc 368
                |||||||||| || || ||||| || |||||||||||||||||| | || || || ||| 
Sbjct: 11253512 actacacaagaacctgcgaccttgccgcacgacgggagcatttggttcgggcactcttgt 11253571

                                                                            
Query: 369      tcaggccacaagcacagccctccagtagctcgagatcttcgtcacatattaatattgacg 428
                |||  |  || ||||| || ||||| |||||||||||||| ||||| || ||||| || |
Sbjct: 11253572 tcacactgcatgcacacccttccagcagctcgagatcttcctcacaaatcaatatggatg 11253631

                                                                            
Query: 429      ccatctctggacagtccagaagcattttagagctaagaaaccctgcgattgtccaagtct 488
                |||  ||||||||||| | ||||||||||||||||||  | ||||| || |||||||| |
Sbjct: 11253632 ccaattctggacagtctaaaagcattttagagctaaggtatcctgcaatcgtccaagttt 11253691

                                                                            
Query: 489      gatatagcctcgactgttttccaataaaccttcctgtcctggtgtcataatattctggcc 548
                |||||||||| ||||| || |||||||||||||||||||| |||||||||||||||||||
Sbjct: 11253692 gatatagccttgactgcttcccaataaaccttcctgtccttgtgtcataatattctggcc 11253751

                                                                            
Query: 549      acttgtcatctgagagcctcttttccacggcttcaacagctctccttgccaagtcaggcc 608
                ||||||| |||||||| ||||||||  || ||||||  |||| |  ||| |||||| |||
Sbjct: 11253752 acttgtcctctgagagtctcttttctgcgacttcaatggctcgctgtgctaagtcacgcc 11253811

                                              
Query: 609      tacccatcttgatacaggctagggtgaact 638
                |||||||||||||||||||||| |||||||
Sbjct: 11253812 tacccatcttgatacaggctagagtgaact 11253841



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 637      ctgccatagcaatgtaggcca 657
                |||||||||||||||||||||
Sbjct: 11253936 ctgccatagcaatgtaggcca 11253956



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 40/46 (86%), Gaps = 4/46 (8%)
 Strand = Plus / Plus

                                                              
Query: 154      tatcgatggattaagggaccacaaacttgccaaaataaccggcata 199
                |||||||||||||    |||||||  ||||||||||||||||||||
Sbjct: 11253366 tatcgatggatta----accacaagattgccaaaataaccggcata 11253407



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>gb|AY108040.1| Zea mays PCO146975 mRNA sequence
          Length = 1418

 Score =  242 bits (122), Expect = 1e-60
 Identities = 296/354 (83%)
 Strand = Plus / Minus

                                                                        
Query: 304  atggaactacacaaggacttgagacctggctgcacgacgggagcatttgatacgagcgct 363
            ||||||||||||||| || || ||| |||| |||||||| ||||||||| | |||||  |
Sbjct: 1063 atggaactacacaagaacctgcgacttggccgcacgacgtgagcatttggtgcgagcatt 1004

                                                                        
Query: 364  gttgctcaggccacaagcacagccctccagtagctcgagatcttcgtcacatattaatat 423
             ||  ||| ||  |||||||| || ||||| |||||||  ||||| || |||| || |||
Sbjct: 1003 cttattcaagctgcaagcacaaccttccagcagctcgaagtcttcatcgcatactagtat 944

                                                                        
Query: 424  tgacgccatctctggacagtccagaagcattttagagctaagaaaccctgcgattgtcca 483
             || |||||||| ||||||||||  | ||| |||||||||||| | || || ||  ||||
Sbjct: 943  ggatgccatctccggacagtccaataacatcttagagctaagatatccagcaatgctcca 884

                                                                        
Query: 484  agtctgatatagcctcgactgttttccaataaaccttcctgtcctggtgtcataatattc 543
            ||| |||||||||| ||| || || ||||| |||||||||||||||||||||||||| ||
Sbjct: 883  agtttgatatagccgcgattgcttcccaatgaaccttcctgtcctggtgtcataatactc 824

                                                                        
Query: 544  tggccacttgtcatctgagagcctcttttccacggcttcaacagctctccttgccaagtc 603
            ||||||||||||||||||||||||||||||  |  | ||||| || |||| |||||||||
Sbjct: 823  tggccacttgtcatctgagagcctcttttctgccacctcaactgccctccgtgccaagtc 764

                                                                  
Query: 604  aggcctacccatcttgatacaggctagggtgaactgccatagcaatgtaggcca 657
            | ||||||||||||||||||| || | |||||||||||||| ||||||||||||
Sbjct: 763  acgcctacccatcttgatacaagccaaggtgaactgccataacaatgtaggcca 710



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>gb|BT024047.1| Zea mays clone EL01N0431H10 mRNA sequence
          Length = 1449

 Score =  226 bits (114), Expect = 7e-56
 Identities = 294/354 (83%)
 Strand = Plus / Minus

                                                                        
Query: 304  atggaactacacaaggacttgagacctggctgcacgacgggagcatttgatacgagcgct 363
            ||||||||||||||| || ||  || |||| |||||||| ||||||||| | |||||  |
Sbjct: 1155 atggaactacacaagaacctgctacttggccgcacgacgtgagcatttggtgcgagcatt 1096

                                                                        
Query: 364  gttgctcaggccacaagcacagccctccagtagctcgagatcttcgtcacatattaatat 423
             ||  ||| ||   ||||||| || ||||| |||||||  ||||| || |||| || |||
Sbjct: 1095 cttattcaagctggaagcacaaccttccagcagctcgaagtcttcatcgcatactagtat 1036

                                                                        
Query: 424  tgacgccatctctggacagtccagaagcattttagagctaagaaaccctgcgattgtcca 483
             || |||||||| ||||||||||  | ||| |||||||||||| | || || ||  ||||
Sbjct: 1035 ggatgccatctccggacagtccaataacatcttagagctaagatatccagcaatgctcca 976

                                                                        
Query: 484  agtctgatatagcctcgactgttttccaataaaccttcctgtcctggtgtcataatattc 543
            ||| |||||||||| ||| || || ||||| |||||||||||||||||||||||||| ||
Sbjct: 975  agtttgatatagccgcgattgcttcccaatgaaccttcctgtcctggtgtcataatactc 916

                                                                        
Query: 544  tggccacttgtcatctgagagcctcttttccacggcttcaacagctctccttgccaagtc 603
            ||||||||||||||||||||||||||||||  |  | ||||| || |||| |||||||||
Sbjct: 915  tggccacttgtcatctgagagcctcttttctgccacctcaactgccctccgtgccaagtc 856

                                                                  
Query: 604  aggcctacccatcttgatacaggctagggtgaactgccatagcaatgtaggcca 657
            | ||||||||||||||||||| || | |||||||||||||| ||||||||||||
Sbjct: 855  acgcctacccatcttgatacaagccaaggtgaactgccataacaatgtaggcca 802



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>dbj|AP006378.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT44A10, TM0223,
             complete sequence
          Length = 101752

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                         
Query: 478   tgtccaagtctgatatagcctcgactgttttccaataaaccttcctgtcctggtgtcata 537
             |||||| || ||||||||||| | ||||||||||||||| |||||||| | |||||||||
Sbjct: 55614 tgtccatgtttgatatagcctggcctgttttccaataaatcttcctgtgcgggtgtcata 55555

                         
Query: 538   atattctggcca 549
              ||||| |||||
Sbjct: 55554 gtattcaggcca 55543



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>gb|AY110009.1| Zea mays CL57181_1 mRNA sequence
          Length = 948

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 529 ggtgtcataatattctggccacttgtcatctgagagcctct 569
           ||||||||| ||||||| |||||||||||||||||| ||||
Sbjct: 459 ggtgtcatagtattctgcccacttgtcatctgagagtctct 499



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>gb|AY448016.1|AY448010S7 Ipomoea trifida haplotype S1 self-incompatibility (S-) locus, contig
             SR7
          Length = 55205

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                         
Query: 528   tggtgtcataatattctggccacttgtc 555
             ||||||||||||||||||||||||||||
Sbjct: 52905 tggtgtcataatattctggccacttgtc 52878



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>dbj|AP006434.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT36O22, TM0333b,
             complete sequence
          Length = 74925

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                          
Query: 595   tgccaagtcaggcctacccatcttgatacaggctagggtgaactg 639
             |||||| |||||||| ||||||||||| |||||||  ||||||||
Sbjct: 71638 tgccaaatcaggccttcccatcttgatgcaggctaaagtgaactg 71682



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>gb|DQ487284.1| Populus sp. UG-2006 neutral invertase 6 mRNA, partial cds
          Length = 888

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 611 cccatcttgatacaggctagggtgaactgccatagcaatgtaggcca 657
           |||||||||||||| ||||  ||||||||||| |||| ||| |||||
Sbjct: 801 cccatcttgatacaagctaatgtgaactgccacagcagtgttggcca 755



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>ref|NM_111456.3| Arabidopsis thaliana beta-fructofuranosidase AT3G05820 mRNA, complete
            cds
          Length = 2054

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 476  attgtccaagtctgatatagcctcgactgttttccaat 513
            |||||||| ||||| || ||||| ||||||||||||||
Sbjct: 1760 attgtccatgtctggtaaagcctggactgttttccaat 1723



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>gb|AC012393.5|ATAC012393 Arabidopsis thaliana chromosome III BAC F10A16 genomic sequence,
             complete sequence
          Length = 87045

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 476   attgtccaagtctgatatagcctcgactgttttccaat 513
             |||||||| ||||| || ||||| ||||||||||||||
Sbjct: 38154 attgtccatgtctggtaaagcctggactgttttccaat 38191



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>gb|AC141113.5| Medicago truncatula clone mth2-7h7, complete sequence
          Length = 138094

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 530   gtgtcataatattctggccacttgtc 555
             |||||||||||||||||||| |||||
Sbjct: 23533 gtgtcataatattctggccatttgtc 23558



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>gb|AC158737.14| Medicago truncatula clone mth2-154f20, complete sequence
          Length = 114538

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 530    gtgtcataatattctggccacttgtc 555
              |||||||||||||||||||| |||||
Sbjct: 112410 gtgtcataatattctggccatttgtc 112435



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>gb|BT005695.1| Arabidopsis thaliana clone U50005 putative alkaline/neutral invertase
            (At3g05820) mRNA, complete cds
          Length = 1933

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 476  attgtccaagtctgatatagcctcgactgttttccaat 513
            |||||||| ||||| || ||||| ||||||||||||||
Sbjct: 1736 attgtccatgtctggtaaagcctggactgttttccaat 1699



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>gb|BT004140.1| Arabidopsis thaliana clone RAFL15-37-K14 (R50005) putative
            alkaline/neutral invertase (At3g05820) mRNA, complete cds
          Length = 2074

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 476  attgtccaagtctgatatagcctcgactgttttccaat 513
            |||||||| ||||| || ||||| ||||||||||||||
Sbjct: 1760 attgtccatgtctggtaaagcctggactgttttccaat 1723



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>emb|AJ422050.1|BVU422050 Beta vulgaris mRNA for neutral invertase (ninv gene)
          Length = 2490

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 500  gactgttttccaataaaccttcctgtcctggtgtcataatattctggcca 549
            |||||||| |||||||||||| ||  | | |||||||||||||| |||||
Sbjct: 1861 gactgtttaccaataaaccttgctccctttgtgtcataatattcaggcca 1812



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>dbj|AB083685.1| Nicotiana tabacum NtINV2 mRNA for invertase, partial cds
          Length = 354

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 530 gtgtcataatattctggccacttgtc 555
           |||||||||||||| |||||||||||
Sbjct: 154 gtgtcataatattccggccacttgtc 129



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>gb|AY815233.1| Schistosoma japonicum SJCHGC07891 protein mRNA, complete cds
          Length = 1076

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 56 tttacatgatatatctgtata 76
          |||||||||||||||||||||
Sbjct: 81 tttacatgatatatctgtata 61



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>emb|CR383666.7| Zebrafish DNA sequence from clone DKEY-30H2 in linkage group 2, complete
              sequence
          Length = 144370

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 375    cacaagcacagccctccagta 395
              |||||||||||||||||||||
Sbjct: 109166 cacaagcacagccctccagta 109146



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>gb|AC115802.10| Mus musculus, clone RP23-408J7, complete sequence
          Length = 185710

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 65     tatatctgtataaaattgcca 85
              |||||||||||||||||||||
Sbjct: 137101 tatatctgtataaaattgcca 137121



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>gb|AF259696.1| Ovis aries microsatellite MNS-22 sequence
          Length = 682

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 52  aatatttacatgatatatctgtata 76
           |||||||||||||||||||| ||||
Sbjct: 201 aatatttacatgatatatctatata 225



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>emb|CR381673.7| Zebrafish DNA sequence from clone CH211-209J3 in linkage group 2,
             complete sequence
          Length = 209097

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 375   cacaagcacagccctccagta 395
             |||||||||||||||||||||
Sbjct: 46082 cacaagcacagccctccagta 46062



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>emb|BX511304.5| Zebrafish DNA sequence from clone DKEYP-94G1 in linkage group 2,
             complete sequence
          Length = 30749

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 375   cacaagcacagccctccagta 395
             |||||||||||||||||||||
Sbjct: 17752 cacaagcacagccctccagta 17732



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>gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome
          Length = 2650701

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 617   ttgatacaggctagggtgaactgc 640
             ||||||||||||||| ||||||||
Sbjct: 41340 ttgatacaggctaggatgaactgc 41363



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>gb|AC122397.2| Mus musculus BAC clone RP24-90D21 from chromosome 15, complete sequence
          Length = 181742

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 48    tggtaatatttacatgatatatctgtat 75
             ||||||||| |||||||||||| |||||
Sbjct: 16380 tggtaatatatacatgatatatatgtat 16353



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>gb|AC124012.4| Mus musculus BAC clone RP24-357P22 from chromosome 18, complete sequence
          Length = 193064

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 90     acttgacagttaattggcct 109
              ||||||||||||||||||||
Sbjct: 136354 acttgacagttaattggcct 136373



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>gb|AC122459.2| Mus musculus BAC clone RP24-273F21 from chromosome 15, complete sequence
          Length = 156807

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 48     tggtaatatttacatgatatatctgtat 75
              ||||||||| |||||||||||| |||||
Sbjct: 148512 tggtaatatatacatgatatatatgtat 148485



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>emb|AL117376.28|HSDJ971B4 Human DNA sequence from clone RP5-971B4 on chromosome 20 Contains the 3'
              end of the C20orf23 gene for a novel protein similar to
              KIF1 type and other kinesin-like proteins, complete
              sequence
          Length = 162213

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 315    caaggacttgagacctggct 334
              ||||||||||||||||||||
Sbjct: 132452 caaggacttgagacctggct 132433



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>emb|AL845333.3| Mouse DNA sequence from clone RP23-245E19 on chromosome 4 Contains
            part of the Ptprd gene for receptor type protein tyrosine
            phosphatase D, complete sequence
          Length = 186256

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 54   tatttacatgatatatctgt 73
            ||||||||||||||||||||
Sbjct: 6884 tatttacatgatatatctgt 6903



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>gb|AC016113.9| Homo sapiens, clone RP11-26P22, complete sequence
          Length = 185419

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 585    cagctctccttgccaagtca 604
              ||||||||||||||||||||
Sbjct: 108142 cagctctccttgccaagtca 108123



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>gb|AC090989.8| Homo sapiens chromosome 18, clone RP11-265C19, complete sequence
          Length = 108799

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 366   tgctcaggccacaagcacag 385
             ||||||||||||||||||||
Sbjct: 62512 tgctcaggccacaagcacag 62493



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>emb|BX005407.5| Zebrafish DNA sequence from clone CH211-222C22 in linkage group 5,
             complete sequence
          Length = 209796

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    tatatctgtataaaattgcc 84
             ||||||||||||||||||||
Sbjct: 66727 tatatctgtataaaattgcc 66708



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>gb|AF049880.1|AF049880 Mus musculus TGFb inducible early protein and hypothetical TGFb
            inducible early protein splice variant genes, complete
            cds
          Length = 7228

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 48   tggtaatatttacatgatatatctgtat 75
            ||||||||| |||||||||||| |||||
Sbjct: 5073 tggtaatatatacatgatatatatgtat 5100



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>emb|BX465221.7| Mouse DNA sequence from clone RP23-13E2 on chromosome X, complete
            sequence
          Length = 26830

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 53   atatttacatgatatatctgtata 76
            ||||||||||||||||| ||||||
Sbjct: 4434 atatttacatgatatatttgtata 4457



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>emb|AJ937762.1| Uncultured gamma proteobacterium fosmid clone b1bcf1.1.c04
          Length = 38209

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 309   actacacaaggacttgagacctgg 332
             |||||||||||| |||||||||||
Sbjct: 37568 actacacaaggagttgagacctgg 37545



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>dbj|AP006410.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT29C05, TM0301a,
             complete sequence
          Length = 28124

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 48    tggtaatatttacatgatat 67
             ||||||||||||||||||||
Sbjct: 13526 tggtaatatttacatgatat 13507



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>dbj|AP004898.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT01P23, TM0047b,
             complete sequence
          Length = 69411

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    tggtaatatttacatgatat 67
             ||||||||||||||||||||
Sbjct: 30420 tggtaatatttacatgatat 30439


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,071,101
Number of Sequences: 3902068
Number of extensions: 5071101
Number of successful extensions: 91375
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91213
Number of HSP's gapped (non-prelim): 160
length of query: 657
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 634
effective length of database: 17,143,297,704
effective search space: 10868850744336
effective search space used: 10868850744336
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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