ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal19p05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK060876.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 3e-51
2dbj|AK101551.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 1e-47
3dbj|AK073623.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 1e-47
4gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome... 149 9e-33
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 149 9e-33
6gb|BT016986.1| Zea mays clone EK07D2304D04.c mRNA sequence 78 3e-11
7gb|AY104092.1| Zea mays PCO081688 mRNA sequence 78 3e-11
8dbj|AK101507.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
9emb|Y10983.1|GMP450CP9 Glycine max mRNA for cytochrome P450-like... 46 0.10
10gb|AC139344.17| Medicago truncatula clone mth2-34b22, complete s... 44 0.40
11emb|CR381630.12| Zebrafish DNA sequence from clone CH211-234G24 ... 42 1.6
12ref|XM_956627.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.2
13ref|XM_326600.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.2
14gb|AC113125.8| Mus musculus chromosome 14, clone RP23-350B18, co... 40 6.2
15gb|AC122279.3| Mus musculus BAC clone RP23-237J8 from chromosome... 40 6.2
16gb|AC164166.2| Mus musculus BAC clone RP23-88C18 from chromosome... 40 6.2
17emb|AL670008.1|NCB13O8 Neurospora crassa DNA linkage group V BAC... 40 6.2
18gb|AE014180.1| Mus musculus piebald deletion region section 8 of... 40 6.2
19gb|AC122472.5| Mus musculus BAC clone RP24-323G20 from chromosom... 40 6.2
20gb|AC096664.1| Homo sapiens BAC clone RP11-240J3 from 2, complet... 40 6.2
21gb|AC156272.6| Mus musculus 10 BAC RP24-244K5 (Roswell Park Canc... 40 6.2
22emb|AL928547.12| Mouse DNA sequence from clone RP23-226B16 on ch... 40 6.2
23emb|CT030736.8| Mouse DNA sequence from clone RP23-396K21 on chr... 40 6.2
24gb|AC004386.1|AC004386 Homo Sapiens Chromosome X clone bWXD691, ... 40 6.2
25gb|AC002418.1|AC002418 Human Chromosome X, complete sequence 40 6.2
26gb|AC117208.3| Mus musculus BAC clone RP23-279D15 from 10, compl... 40 6.2
27gb|AC146601.3| Mus musculus BAC clone RP23-315I4 from 14, comple... 40 6.2

>dbj|AK060876.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-A04, full
           insert sequence
          Length = 1014

 Score =  210 bits (106), Expect = 3e-51
 Identities = 205/238 (86%)
 Strand = Plus / Minus

                                                                       
Query: 219 ttcacttgaggttcttgttaaaccagtcaatcatgtctgtcagggcctcctcggcgctct 278
           ||||||| |||||||| |||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 756 ttcacttcaggttcttattaaaccagtcaatcatgtccgccagggcttcctcggcgctct 697

                                                                       
Query: 279 ttacagcagccgcatcttcgccattatatctcacggtccatccatgagaaaccccaggga 338
           | |||||||| ||||| ||    || |||||||| |||||||||||   |||||||||||
Sbjct: 696 tgacagcagctgcatcatcattcttgtatctcacagtccatccatgttcaaccccaggga 637

                                                                       
Query: 339 agatcttgacaaagtgagcaatccctgagttagatgatagaacctgctcgaactccttga 398
           ||||||||||||||||  |||||||||| || || || |||||||||||||||| ||| |
Sbjct: 636 agatcttgacaaagtggccaatccctgactttgaagaaagaacctgctcgaactgcttca 577

                                                                     
Query: 399 ccaattctggtggggacatcacatcagtttcagctccaagtacagcgatggggcattt 456
           ||| |||||||||||||||   |||| ||||||||||||||| ||| || ||||||||
Sbjct: 576 ccacttctggtggggacatacgatcaatttcagctccaagtatagcaattgggcattt 519



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>dbj|AK101551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048O15, full
           insert sequence
          Length = 1127

 Score =  198 bits (100), Expect = 1e-47
 Identities = 202/236 (85%)
 Strand = Plus / Minus

                                                                       
Query: 221 cacttgaggttcttgttaaaccagtcaatcatgtctgtcagggcctcctcggcgctcttt 280
           ||||| |||||||| |||||||||||||||||||| | |||||| |||||||||||||| 
Sbjct: 938 cacttcaggttcttattaaaccagtcaatcatgtccgccagggcttcctcggcgctcttg 879

                                                                       
Query: 281 acagcagccgcatcttcgccattatatctcacggtccatccatgagaaaccccagggaag 340
           |||||||| ||||| ||    || |||||||| |||||||||||   |||||||||||||
Sbjct: 878 acagcagctgcatcatcattcttgtatctcacagtccatccatgttcaaccccagggaag 819

                                                                       
Query: 341 atcttgacaaagtgagcaatccctgagttagatgatagaacctgctcgaactccttgacc 400
           ||||||||||||||  |||||||||| || || || |||||||||||||||| |||  ||
Sbjct: 818 atcttgacaaagtggccaatccctgactttgaagaaagaacctgctcgaactgcttctcc 759

                                                                   
Query: 401 aattctggtggggacatcacatcagtttcagctccaagtacagcgatggggcattt 456
           | |||||||||||||||   |||| ||||||||||||||| ||| || ||||||||
Sbjct: 758 acttctggtggggacatacgatcaatttcagctccaagtatagcaattgggcattt 703



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>dbj|AK073623.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048N15, full
           insert sequence
          Length = 1127

 Score =  198 bits (100), Expect = 1e-47
 Identities = 202/236 (85%)
 Strand = Plus / Minus

                                                                       
Query: 221 cacttgaggttcttgttaaaccagtcaatcatgtctgtcagggcctcctcggcgctcttt 280
           ||||| |||||||| |||||||||||||||||||| | |||||| |||||||||||||| 
Sbjct: 938 cacttcaggttcttattaaaccagtcaatcatgtccgccagggcttcctcggcgctcttg 879

                                                                       
Query: 281 acagcagccgcatcttcgccattatatctcacggtccatccatgagaaaccccagggaag 340
           |||||||| ||||| ||    || |||||||| |||||||||||   |||||||||||||
Sbjct: 878 acagcagctgcatcatcattcttgtatctcacagtccatccatgttcaaccccagggaag 819

                                                                       
Query: 341 atcttgacaaagtgagcaatccctgagttagatgatagaacctgctcgaactccttgacc 400
           ||||||||||||||  |||||||||| || || || |||||||||||||||| |||  ||
Sbjct: 818 atcttgacaaagtggccaatccctgactttgaagaaagaacctgctcgaactgcttctcc 759

                                                                   
Query: 401 aattctggtggggacatcacatcagtttcagctccaagtacagcgatggggcattt 456
           | |||||||||||||||   |||| ||||||||||||||| ||| || ||||||||
Sbjct: 758 acttctggtggggacatacgatcaatttcagctccaagtatagcaattgggcattt 703



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>gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0605G01,
             complete sequence
          Length = 146303

 Score =  149 bits (75), Expect = 9e-33
 Identities = 126/143 (88%)
 Strand = Plus / Minus

                                                                         
Query: 219   ttcacttgaggttcttgttaaaccagtcaatcatgtctgtcagggcctcctcggcgctct 278
             |||||||||||||||| ||||||||||| |||||||||| |||||| |||||||||||||
Sbjct: 66628 ttcacttgaggttcttattaaaccagtcgatcatgtctgccagggcttcctcggcgctct 66569

                                                                         
Query: 279   ttacagcagccgcatcttcgccattatatctcacggtccatccatgagaaaccccaggga 338
             | |||||||| ||||| ||  | || ||||| ||||||||||||||    ||||||||||
Sbjct: 66568 tgacagcagcggcatcgtcatccttgtatcttacggtccatccatgctcgaccccaggga 66509

                                    
Query: 339   agatcttgacaaagtgagcaatc 361
             ||||||||||||||||| |||||
Sbjct: 66508 agatcttgacaaagtgaccaatc 66486



 Score =  135 bits (68), Expect = 1e-28
 Identities = 119/136 (87%)
 Strand = Plus / Minus

                                                                         
Query: 219   ttcacttgaggttcttgttaaaccagtcaatcatgtctgtcagggcctcctcggcgctct 278
             ||||||| |||||||| |||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 73161 ttcacttcaggttcttattaaaccagtcaatcatgtccgccagggcttcctcggcgctct 73102

                                                                         
Query: 279   ttacagcagccgcatcttcgccattatatctcacggtccatccatgagaaaccccaggga 338
             | |||||||| ||||| ||    || |||||||| |||||||||||   |||||||||||
Sbjct: 73101 tgacagcagctgcatcatcattcttgtatctcacagtccatccatgttcaaccccaggga 73042

                             
Query: 339   agatcttgacaaagtg 354
             ||||||||||||||||
Sbjct: 73041 agatcttgacaaagtg 73026



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                         
Query: 377   agaacctgctcgaactccttgaccaattctggtggggacatcacatcagtttcagctcca 436
             |||||||||||||||| ||| |||| |||||||||||||||   |||| |||||||||||
Sbjct: 72353 agaacctgctcgaactgcttcaccacttctggtggggacatacgatcaatttcagctcca 72294

                                 
Query: 437   agtacagcgatggggcattt 456
             |||| ||| || ||||||||
Sbjct: 72293 agtatagcaattgggcattt 72274



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 100/123 (81%)
 Strand = Plus / Minus

                                                                         
Query: 239   aaccagtcaatcatgtctgtcagggcctcctcggcgctctttacagcagccgcatcttcg 298
             ||||| || |||||||||  |||||| ||||| |||||||| || ||||| ||||| |||
Sbjct: 82772 aaccaatccatcatgtcttccagggcttcctcagcgctcttgacggcagctgcatcatcg 82713

                                                                         
Query: 299   ccattatatctcacggtccatccatgagaaaccccagggaagatcttgacaaagtgagca 358
               ||| |||||||| | |||||||||    || || ||||| |||||||| |||||||||
Sbjct: 82712 tgattgtatctcacagcccatccatgctctacgccggggaaaatcttgacgaagtgagca 82653

                
Query: 359   atc 361
             |||
Sbjct: 82652 atc 82650



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  149 bits (75), Expect = 9e-33
 Identities = 126/143 (88%)
 Strand = Plus / Minus

                                                                            
Query: 219      ttcacttgaggttcttgttaaaccagtcaatcatgtctgtcagggcctcctcggcgctct 278
                |||||||||||||||| ||||||||||| |||||||||| |||||| |||||||||||||
Sbjct: 19262553 ttcacttgaggttcttattaaaccagtcgatcatgtctgccagggcttcctcggcgctct 19262494

                                                                            
Query: 279      ttacagcagccgcatcttcgccattatatctcacggtccatccatgagaaaccccaggga 338
                | |||||||| ||||| ||  | || ||||| ||||||||||||||    ||||||||||
Sbjct: 19262493 tgacagcagcggcatcgtcatccttgtatcttacggtccatccatgctcgaccccaggga 19262434

                                       
Query: 339      agatcttgacaaagtgagcaatc 361
                ||||||||||||||||| |||||
Sbjct: 19262433 agatcttgacaaagtgaccaatc 19262411



 Score =  135 bits (68), Expect = 1e-28
 Identities = 119/136 (87%)
 Strand = Plus / Minus

                                                                            
Query: 219      ttcacttgaggttcttgttaaaccagtcaatcatgtctgtcagggcctcctcggcgctct 278
                ||||||| |||||||| |||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 19269086 ttcacttcaggttcttattaaaccagtcaatcatgtccgccagggcttcctcggcgctct 19269027

                                                                            
Query: 279      ttacagcagccgcatcttcgccattatatctcacggtccatccatgagaaaccccaggga 338
                | |||||||| ||||| ||    || |||||||| |||||||||||   |||||||||||
Sbjct: 19269026 tgacagcagctgcatcatcattcttgtatctcacagtccatccatgttcaaccccaggga 19268967

                                
Query: 339      agatcttgacaaagtg 354
                ||||||||||||||||
Sbjct: 19268966 agatcttgacaaagtg 19268951



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                            
Query: 377      agaacctgctcgaactccttgaccaattctggtggggacatcacatcagtttcagctcca 436
                |||||||||||||||| ||| |||| |||||||||||||||   |||| |||||||||||
Sbjct: 19268278 agaacctgctcgaactgcttcaccacttctggtggggacatacgatcaatttcagctcca 19268219

                                    
Query: 437      agtacagcgatggggcattt 456
                |||| ||| || ||||||||
Sbjct: 19268218 agtatagcaattgggcattt 19268199



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 100/123 (81%)
 Strand = Plus / Minus

                                                                            
Query: 239      aaccagtcaatcatgtctgtcagggcctcctcggcgctctttacagcagccgcatcttcg 298
                ||||| || |||||||||  |||||| ||||| |||||||| || ||||| ||||| |||
Sbjct: 19278697 aaccaatccatcatgtcttccagggcttcctcagcgctcttgacggcagctgcatcatcg 19278638

                                                                            
Query: 299      ccattatatctcacggtccatccatgagaaaccccagggaagatcttgacaaagtgagca 358
                  ||| |||||||| | |||||||||    || || ||||| |||||||| |||||||||
Sbjct: 19278637 tgattgtatctcacagcccatccatgctctacgccggggaaaatcttgacgaagtgagca 19278578

                   
Query: 359      atc 361
                |||
Sbjct: 19278577 atc 19278575



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>gb|BT016986.1| Zea mays clone EK07D2304D04.c mRNA sequence
          Length = 1139

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 177/223 (79%)
 Strand = Plus / Minus

                                                                       
Query: 218 gttcacttgaggttcttgttaaaccagtcaatcatgtctgtcagggcctcctcggcgctc 277
           ||||| || ||||||||||| |||||||| | |||||| |  | ||| ||||| ||||||
Sbjct: 914 gttcattttaggttcttgttgaaccagtcgagcatgtccgcaaaggcttcctcagcgctc 855

                                                                       
Query: 278 tttacagcagccgcatcttcgccattatatctcacggtccatccatgagaaaccccaggg 337
           || || ||||| ||||| |||    | ||||||||| |||| ||||| |  || ||||||
Sbjct: 854 ttcacggcagctgcatcatcgaggctgtatctcacgctccacccatgcgccacgccaggg 795

                                                                       
Query: 338 aagatcttgacaaagtgagcaatccctgagttagatgatagaacctgctcgaactccttg 397
           |||| |||||| |||||| ||| |||||||||    || ||  | |||||||| | ||||
Sbjct: 794 aagaccttgacgaagtgaccaacccctgagttcacagaaagggcttgctcgaattgcttg 735

                                                      
Query: 398 accaattctggtggggacatcacatcagtttcagctccaagta 440
           || || |||||||||||| |||||||  | |||||||||||||
Sbjct: 734 actaactctggtggggacctcacatccatctcagctccaagta 692



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>gb|AY104092.1| Zea mays PCO081688 mRNA sequence
          Length = 1359

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 177/223 (79%)
 Strand = Plus / Minus

                                                                        
Query: 218  gttcacttgaggttcttgttaaaccagtcaatcatgtctgtcagggcctcctcggcgctc 277
            ||||| || ||||||||||| |||||||| | |||||| |  | ||| ||||| ||||||
Sbjct: 1045 gttcattttaggttcttgttgaaccagtcgagcatgtccgcaaaggcttcctcagcgctc 986

                                                                        
Query: 278  tttacagcagccgcatcttcgccattatatctcacggtccatccatgagaaaccccaggg 337
            || || ||||| ||||| |||    | ||||||||| |||| ||||| |  || ||||||
Sbjct: 985  ttcacggcagctgcatcatcgaggctgtatctcacgctccacccatgcgccacgccaggg 926

                                                                        
Query: 338  aagatcttgacaaagtgagcaatccctgagttagatgatagaacctgctcgaactccttg 397
            |||| |||||| |||||| ||| |||||||||    || ||  | |||||||| | ||||
Sbjct: 925  aagaccttgacgaagtgaccaacccctgagttcacagaaagggcttgctcgaattgcttg 866

                                                       
Query: 398  accaattctggtggggacatcacatcagtttcagctccaagta 440
            || || |||||||||||| |||||||  | |||||||||||||
Sbjct: 865  actaactctggtggggacctcacatccatctcagctccaagta 823



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>dbj|AK101507.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044O16, full
           insert sequence
          Length = 1039

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 100/123 (81%)
 Strand = Plus / Minus

                                                                       
Query: 239 aaccagtcaatcatgtctgtcagggcctcctcggcgctctttacagcagccgcatcttcg 298
           ||||| || |||||||||  |||||| ||||| |||||||| || ||||| ||||| |||
Sbjct: 747 aaccaatccatcatgtcttccagggcttcctcagcgctcttgacggcagctgcatcatcg 688

                                                                       
Query: 299 ccattatatctcacggtccatccatgagaaaccccagggaagatcttgacaaagtgagca 358
             ||| |||||||| | |||||||||    || || ||||| |||||||| |||||||||
Sbjct: 687 tgattgtatctcacagcccatccatgctctacgccggggaaaatcttgacgaagtgagca 628

              
Query: 359 atc 361
           |||
Sbjct: 627 atc 625



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>emb|Y10983.1|GMP450CP9 Glycine max mRNA for cytochrome P450-like protein, clone CP9
          Length = 1818

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 221  cacttgaggttcttgttaaacca 243
            |||||||||||||||||||||||
Sbjct: 1551 cacttgaggttcttgttaaacca 1573



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>gb|AC139344.17| Medicago truncatula clone mth2-34b22, complete sequence
          Length = 129728

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 233   ttgttaaaccagtcaatcatgt 254
             ||||||||||||||||||||||
Sbjct: 89158 ttgttaaaccagtcaatcatgt 89179



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>emb|CR381630.12| Zebrafish DNA sequence from clone CH211-234G24 in linkage group 18,
             complete sequence
          Length = 152854

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 56    caatcacacaccaaccagcac 76
             |||||||||||||||||||||
Sbjct: 88634 caatcacacaccaaccagcac 88654



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>ref|XM_956627.1| Neurospora crassa OR74A hypothetical protein (NCU01108.1) partial
           mRNA
          Length = 384

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 267 cctcggcgctctttacagcagccgcatc 294
           ||||||||||||  ||||||||||||||
Sbjct: 277 cctcggcgctctcaacagcagccgcatc 250



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>ref|XM_326600.1| Neurospora crassa OR74A hypothetical protein (NCU01108.1) partial
           mRNA
          Length = 384

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 267 cctcggcgctctttacagcagccgcatc 294
           ||||||||||||  ||||||||||||||
Sbjct: 277 cctcggcgctctcaacagcagccgcatc 250



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>gb|AC113125.8| Mus musculus chromosome 14, clone RP23-350B18, complete sequence
          Length = 220629

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   aaaccagtcaatcatgtctg 257
             ||||||||||||||||||||
Sbjct: 37371 aaaccagtcaatcatgtctg 37390



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>gb|AC122279.3| Mus musculus BAC clone RP23-237J8 from chromosome 14, complete sequence
          Length = 203640

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 238    aaaccagtcaatcatgtctg 257
              ||||||||||||||||||||
Sbjct: 113503 aaaccagtcaatcatgtctg 113484



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>gb|AC164166.2| Mus musculus BAC clone RP23-88C18 from chromosome 16, complete sequence
          Length = 140552

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 265    ctcctcggcgctctttacagcagc 288
              ||||||||||||||||||| ||||
Sbjct: 138617 ctcctcggcgctctttacaacagc 138594



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>emb|AL670008.1|NCB13O8 Neurospora crassa DNA linkage group V BAC contig B13O8
          Length = 80765

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 267   cctcggcgctctttacagcagccgcatc 294
             ||||||||||||  ||||||||||||||
Sbjct: 13956 cctcggcgctctcaacagcagccgcatc 13929



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>gb|AE014180.1| Mus musculus piebald deletion region section 8 of 11 of the complete
             sequence
          Length = 400029

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   aaaccagtcaatcatgtctg 257
             ||||||||||||||||||||
Sbjct: 29399 aaaccagtcaatcatgtctg 29418



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>gb|AC122472.5| Mus musculus BAC clone RP24-323G20 from chromosome 10, complete
             sequence
          Length = 180612

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 182   ttattagttattacaaaagg 201
             ||||||||||||||||||||
Sbjct: 10445 ttattagttattacaaaagg 10464



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>gb|AC096664.1| Homo sapiens BAC clone RP11-240J3 from 2, complete sequence
          Length = 83996

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   ttcacttgaggttcttgtta 238
             ||||||||||||||||||||
Sbjct: 76162 ttcacttgaggttcttgtta 76143



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>gb|AC156272.6| Mus musculus 10 BAC RP24-244K5 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 166962

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 328   aaccccagggaagatcttga 347
             ||||||||||||||||||||
Sbjct: 24647 aaccccagggaagatcttga 24628



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>emb|AL928547.12| Mouse DNA sequence from clone RP23-226B16 on chromosome 2, complete
             sequence
          Length = 131255

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   gaatgacacaggcttattag 188
             ||||||||||||||||||||
Sbjct: 10016 gaatgacacaggcttattag 10035



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>emb|CT030736.8| Mouse DNA sequence from clone RP23-396K21 on chromosome 16, complete
             sequence
          Length = 181320

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 265   ctcctcggcgctctttacagcagc 288
             ||||||||||||||||||| ||||
Sbjct: 29744 ctcctcggcgctctttacaacagc 29721



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>gb|AC004386.1|AC004386 Homo Sapiens Chromosome X clone bWXD691, complete sequence
          Length = 172657

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 123    aaacaccataacataaaccc 142
              ||||||||||||||||||||
Sbjct: 110387 aaacaccataacataaaccc 110406



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>gb|AC002418.1|AC002418 Human Chromosome X, complete sequence
          Length = 128915

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 123   aaacaccataacataaaccc 142
             ||||||||||||||||||||
Sbjct: 60316 aaacaccataacataaaccc 60297



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>gb|AC117208.3| Mus musculus BAC clone RP23-279D15 from 10, complete sequence
          Length = 174202

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 182    ttattagttattacaaaagg 201
              ||||||||||||||||||||
Sbjct: 137220 ttattagttattacaaaagg 137239



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>gb|AC146601.3| Mus musculus BAC clone RP23-315I4 from 14, complete sequence
          Length = 172271

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 238    aaaccagtcaatcatgtctg 257
              ||||||||||||||||||||
Sbjct: 150717 aaaccagtcaatcatgtctg 150736


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,731,465
Number of Sequences: 3902068
Number of extensions: 3731465
Number of successful extensions: 53980
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 53910
Number of HSP's gapped (non-prelim): 64
length of query: 460
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 438
effective length of database: 17,147,199,772
effective search space: 7510473500136
effective search space used: 7510473500136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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