| Clone Name | rbaal19n16 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY108634.1| Zea mays PCO132509 mRNA sequence Length = 537 Score = 176 bits (89), Expect = 4e-41 Identities = 208/248 (83%), Gaps = 6/248 (2%) Strand = Plus / Minus Query: 113 ggtgcggtacagcttgccgaaaacatggagcacagcaacaaccgcaataaaccctatgct 172 ||||||||||||||| ||||| ||||||||||||||||| || || | ||||| || || Sbjct: 337 ggtgcggtacagcttcccgaatacatggagcacagcaacgacggctacgaacccaatact 278 Query: 173 catgatcagaacagcatttggggacatcttgcgcccagcagcctcatcggtgtagaactg 232 |||||||||||||| ||||| ||||| ||||| || ||||||||||| |||||||| || Sbjct: 277 catgatcagaacagtgtttggtgacattttgcggccggcagcctcatcagtgtagaattg 218 Query: 233 aagcattgtactggcaccggcaccacctccagcagcagcagcaccactggtggttctacg 292 ||||||| ||||||||| |||||| ||||||||||||| || ||||| ||||| Sbjct: 217 gagcattgagctggcaccg------cctccaccagcagcagcaccgcttgtggtcctacg 164 Query: 293 cctgcgcaagcttgcagctgcagctgcactccctcttgcaggggcgtcaccattagccac 352 ||| |||| |||||| ||||| || || |||||||| ||||| || |||||||| ||||| Sbjct: 163 cctacgcaggcttgcggctgccgccgcgctccctctagcaggtgcatcaccattggccac 104 Query: 353 catcttgt 360 |||||||| Sbjct: 103 catcttgt 96
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 155 bits (78), Expect = 1e-34 Identities = 117/130 (90%) Strand = Plus / Minus Query: 117 cggtacagcttgccgaaaacatggagcacagcaacaaccgcaataaaccctatgctcatg 176 ||||| |||||||||||||||||||| | ||||| ||||| | |||||| ||||||||| Sbjct: 3719081 cggtatagcttgccgaaaacatggagaagggcaacgaccgcgaaaaacccgatgctcatg 3719022 Query: 177 atcagaacagcatttggggacatcttgcgcccagcagcctcatcggtgtagaactgaagc 236 |||||||||||||| ||||||||||||| |||||||||||| || ||||||||||||||| Sbjct: 3719021 atcagaacagcattgggggacatcttgcacccagcagcctcttcagtgtagaactgaagc 3718962 Query: 237 attgtactgg 246 ||||| |||| Sbjct: 3718961 attgtgctgg 3718952 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 282 gtggttctacgcctgcgcaagcttgcagctgcagctgcactccctcttgcaggggcgtca 341 |||||||| ||||||||||||||||| || || ||||| |||||||| |||||| | || Sbjct: 3718919 gtggttctgcgcctgcgcaagcttgcggcagctgctgcgctccctctggcagggccatcg 3718860 Query: 342 ccattagccaccatcttgtttta 364 ||||||||| |||||||||||| Sbjct: 3718859 ccattagccggcatcttgtttta 3718837
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 155 bits (78), Expect = 1e-34 Identities = 117/130 (90%) Strand = Plus / Minus Query: 117 cggtacagcttgccgaaaacatggagcacagcaacaaccgcaataaaccctatgctcatg 176 ||||| |||||||||||||||||||| | ||||| ||||| | |||||| ||||||||| Sbjct: 3719055 cggtatagcttgccgaaaacatggagaagggcaacgaccgcgaaaaacccgatgctcatg 3718996 Query: 177 atcagaacagcatttggggacatcttgcgcccagcagcctcatcggtgtagaactgaagc 236 |||||||||||||| ||||||||||||| |||||||||||| || ||||||||||||||| Sbjct: 3718995 atcagaacagcattgggggacatcttgcacccagcagcctcttcagtgtagaactgaagc 3718936 Query: 237 attgtactgg 246 ||||| |||| Sbjct: 3718935 attgtgctgg 3718926 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 282 gtggttctacgcctgcgcaagcttgcagctgcagctgcactccctcttgcaggggcgtca 341 |||||||| ||||||||||||||||| || || ||||| |||||||| |||||| | || Sbjct: 3718893 gtggttctgcgcctgcgcaagcttgcggcagctgctgcgctccctctggcagggccatcg 3718834 Query: 342 ccattagccaccatcttgtttta 364 ||||||||| |||||||||||| Sbjct: 3718833 ccattagccggcatcttgtttta 3718811
>emb|AL713933.6|CNS07YPE Oryza sativa chromosome 12, . BAC OJ1041_D02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104421 Score = 155 bits (78), Expect = 1e-34 Identities = 117/130 (90%) Strand = Plus / Plus Query: 117 cggtacagcttgccgaaaacatggagcacagcaacaaccgcaataaaccctatgctcatg 176 ||||| |||||||||||||||||||| | ||||| ||||| | |||||| ||||||||| Sbjct: 30592 cggtatagcttgccgaaaacatggagaagggcaacgaccgcgaaaaacccgatgctcatg 30651 Query: 177 atcagaacagcatttggggacatcttgcgcccagcagcctcatcggtgtagaactgaagc 236 |||||||||||||| ||||||||||||| |||||||||||| || ||||||||||||||| Sbjct: 30652 atcagaacagcattgggggacatcttgcacccagcagcctcttcagtgtagaactgaagc 30711 Query: 237 attgtactgg 246 ||||| |||| Sbjct: 30712 attgtgctgg 30721 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 282 gtggttctacgcctgcgcaagcttgcagctgcagctgcactccctcttgcaggggcgtca 341 |||||||| ||||||||||||||||| || || ||||| |||||||| |||||| | || Sbjct: 30754 gtggttctgcgcctgcgcaagcttgcggcagctgctgcgctccctctggcagggccatcg 30813 Query: 342 ccattagccaccatcttgtttta 364 ||||||||| |||||||||||| Sbjct: 30814 ccattagccggcatcttgtttta 30836
>gb|AY109379.1| Zea mays CL15999_3 mRNA sequence Length = 1139 Score = 153 bits (77), Expect = 6e-34 Identities = 197/239 (82%), Gaps = 6/239 (2%) Strand = Plus / Minus Query: 113 ggtgcggtacagcttgccgaaaacatggagcacagcaacaaccgcaataaaccctatgct 172 ||||||||||||||| || ||||||||| ||| ||||| || || ||||| ||||| Sbjct: 966 ggtgcggtacagcttcccnnnnncatggagcatagcgacaacggcgatgaacccaatgct 907 Query: 173 catgatcagaacagcatttggggacatcttgcgcccagcagcctcatcggtgtagaactg 232 |||||||||||| | ||||| ||||| ||||| || ||||||||||||||||||||||| Sbjct: 906 catgatcagaacggtgtttggtgacattttgcggcccgcagcctcatcggtgtagaactg 847 Query: 233 aagcattgtactggcaccggcaccacctccagcagcagcagcaccactggtggttctacg 292 ||||| | ||||||||| |||||| || |||||||||| || ||||| ||||| Sbjct: 846 gagcatcgagctggcaccg------cctccaccaccagcagcaccgcttgtggtcctacg 793 Query: 293 cctgcgcaagcttgcagctgcagctgcactccctcttgcaggggcgtcaccattagcca 351 |||||||| |||||||||||| || |||||||||| | |||| || |||||||| |||| Sbjct: 792 cctgcgcaggcttgcagctgccgccgcactccctcgtccaggtgcatcaccattcgcca 734
>ref|NM_193564.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 243 Score = 149 bits (75), Expect = 9e-33 Identities = 123/139 (88%) Strand = Plus / Minus Query: 113 ggtgcggtacagcttgccgaaaacatggagcacagcaacaaccgcaataaaccctatgct 172 ||||||||| ||||||||||||||||| || | |||||| || ||||| ||||| ||||| Sbjct: 234 ggtgcggtaaagcttgccgaaaacatgcagaagagcaacgacggcaatgaacccaatgct 175 Query: 173 catgatcagaacagcatttggggacatcttgcgcccagcagcctcatcggtgtagaactg 232 |||||| || || | || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 174 catgatgaggactgagttcggggacatcttgcgcccagcagcctcatcggtgtagaactg 115 Query: 233 aagcattgtactggcaccg 251 |||||||| ||||||||| Sbjct: 114 gagcattgtgctggcaccg 96 Score = 97.6 bits (49), Expect = 3e-17 Identities = 70/77 (90%) Strand = Plus / Minus Query: 279 ctggtggttctacgcctgcgcaagcttgcagctgcagctgcactccctcttgcaggggcg 338 |||||||||||||||||||||||||||||||| || |||||||||||||| || ||||| Sbjct: 77 ctggtggttctacgcctgcgcaagcttgcagcagctgctgcactccctctagccggggca 18 Query: 339 tcaccattagccaccat 355 || ||||| |||||||| Sbjct: 17 tctccattggccaccat 1
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 149 bits (75), Expect = 9e-33 Identities = 123/139 (88%) Strand = Plus / Minus Query: 113 ggtgcggtacagcttgccgaaaacatggagcacagcaacaaccgcaataaaccctatgct 172 ||||||||| ||||||||||||||||| || | |||||| || ||||| ||||| ||||| Sbjct: 21628750 ggtgcggtaaagcttgccgaaaacatgcagaagagcaacgacggcaatgaacccaatgct 21628691 Query: 173 catgatcagaacagcatttggggacatcttgcgcccagcagcctcatcggtgtagaactg 232 |||||| || || | || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 21628690 catgatgaggactgagttcggggacatcttgcgcccagcagcctcatcggtgtagaactg 21628631 Query: 233 aagcattgtactggcaccg 251 |||||||| ||||||||| Sbjct: 21628630 gagcattgtgctggcaccg 21628612 Score = 111 bits (56), Expect = 2e-21 Identities = 80/88 (90%) Strand = Plus / Minus Query: 279 ctggtggttctacgcctgcgcaagcttgcagctgcagctgcactccctcttgcaggggcg 338 |||||||||||||||||||||||||||||||| || |||||||||||||| || ||||| Sbjct: 21628593 ctggtggttctacgcctgcgcaagcttgcagcagctgctgcactccctctagccggggca 21628534 Query: 339 tcaccattagccaccatcttgttttatc 366 || ||||| |||||||||||| |||||| Sbjct: 21628533 tctccattggccaccatcttgctttatc 21628506
>dbj|AP003296.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0697C12 Length = 149098 Score = 149 bits (75), Expect = 9e-33 Identities = 123/139 (88%) Strand = Plus / Minus Query: 113 ggtgcggtacagcttgccgaaaacatggagcacagcaacaaccgcaataaaccctatgct 172 ||||||||| ||||||||||||||||| || | |||||| || ||||| ||||| ||||| Sbjct: 85303 ggtgcggtaaagcttgccgaaaacatgcagaagagcaacgacggcaatgaacccaatgct 85244 Query: 173 catgatcagaacagcatttggggacatcttgcgcccagcagcctcatcggtgtagaactg 232 |||||| || || | || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 85243 catgatgaggactgagttcggggacatcttgcgcccagcagcctcatcggtgtagaactg 85184 Query: 233 aagcattgtactggcaccg 251 |||||||| ||||||||| Sbjct: 85183 gagcattgtgctggcaccg 85165 Score = 111 bits (56), Expect = 2e-21 Identities = 80/88 (90%) Strand = Plus / Minus Query: 279 ctggtggttctacgcctgcgcaagcttgcagctgcagctgcactccctcttgcaggggcg 338 |||||||||||||||||||||||||||||||| || |||||||||||||| || ||||| Sbjct: 85146 ctggtggttctacgcctgcgcaagcttgcagcagctgctgcactccctctagccggggca 85087 Query: 339 tcaccattagccaccatcttgttttatc 366 || ||||| |||||||||||| |||||| Sbjct: 85086 tctccattggccaccatcttgctttatc 85059
>dbj|AK065822.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013042A04, full insert sequence Length = 1906 Score = 149 bits (75), Expect = 9e-33 Identities = 123/139 (88%) Strand = Plus / Minus Query: 113 ggtgcggtacagcttgccgaaaacatggagcacagcaacaaccgcaataaaccctatgct 172 ||||||||| ||||||||||||||||| || | |||||| || ||||| ||||| ||||| Sbjct: 1460 ggtgcggtaaagcttgccgaaaacatgcagaagagcaacgacggcaatgaacccaatgct 1401 Query: 173 catgatcagaacagcatttggggacatcttgcgcccagcagcctcatcggtgtagaactg 232 |||||| || || | || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1400 catgatgaggactgagttcggggacatcttgcgcccagcagcctcatcggtgtagaactg 1341 Query: 233 aagcattgtactggcaccg 251 |||||||| ||||||||| Sbjct: 1340 gagcattgtgctggcaccg 1322 Score = 111 bits (56), Expect = 2e-21 Identities = 80/88 (90%) Strand = Plus / Minus Query: 279 ctggtggttctacgcctgcgcaagcttgcagctgcagctgcactccctcttgcaggggcg 338 |||||||||||||||||||||||||||||||| || |||||||||||||| || ||||| Sbjct: 1303 ctggtggttctacgcctgcgcaagcttgcagcagctgctgcactccctctagccggggca 1244 Query: 339 tcaccattagccaccatcttgttttatc 366 || ||||| |||||||||||| |||||| Sbjct: 1243 tctccattggccaccatcttgctttatc 1216
>ref|NM_130071.3| Arabidopsis thaliana SEC61 BETA; protein transporter AT2G45070 (SEC61 BETA) transcript variant AT2G45070.1 mRNA, complete cds Length = 559 Score = 79.8 bits (40), Expect = 7e-12 Identities = 97/116 (83%) Strand = Plus / Minus Query: 123 agcttgccgaaaacatggagcacagcaacaaccgcaataaaccctatgctcatgatcaga 182 |||||||| | |||||| |||||||| || | ||||| || || ||||||||||| ||| Sbjct: 369 agcttgcccataacatgaagcacagcgacgaaagcaatgaaaccgatgctcatgataaga 310 Query: 183 acagcatttggggacatcttgcgcccagcagcctcatcggtgtagaactgaagcat 238 ||| |||| ||||| |||||| | |||| || ||||||||||||||||||||||| Sbjct: 309 acaacattgggggagatcttgagaccaggtgcgtcatcggtgtagaactgaagcat 254 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 297 cgcaagcttgcagctgcagctgcactccctct 328 |||| |||||||| |||||||||||| ||||| Sbjct: 192 cgcatgcttgcagttgcagctgcacttcctct 161
>ref|NM_001036462.1| Arabidopsis thaliana SEC61 BETA; protein transporter AT2G45070 (SEC61 BETA) transcript variant AT2G45070.2 mRNA, complete cds Length = 565 Score = 79.8 bits (40), Expect = 7e-12 Identities = 97/116 (83%) Strand = Plus / Minus Query: 123 agcttgccgaaaacatggagcacagcaacaaccgcaataaaccctatgctcatgatcaga 182 |||||||| | |||||| |||||||| || | ||||| || || ||||||||||| ||| Sbjct: 358 agcttgcccataacatgaagcacagcgacgaaagcaatgaaaccgatgctcatgataaga 299 Query: 183 acagcatttggggacatcttgcgcccagcagcctcatcggtgtagaactgaagcat 238 ||| |||| ||||| |||||| | |||| || ||||||||||||||||||||||| Sbjct: 298 acaacattgggggagatcttgagaccaggtgcgtcatcggtgtagaactgaagcat 243 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 297 cgcaagcttgcagctgcagctgcactccctct 328 |||| |||||||| |||||||||||| ||||| Sbjct: 181 cgcatgcttgcagttgcagctgcacttcctct 150
>ref|NM_001036463.1| Arabidopsis thaliana SEC61 BETA; protein transporter AT2G45070 (SEC61 BETA) transcript variant AT2G45070.3 mRNA, complete cds Length = 545 Score = 79.8 bits (40), Expect = 7e-12 Identities = 97/116 (83%) Strand = Plus / Minus Query: 123 agcttgccgaaaacatggagcacagcaacaaccgcaataaaccctatgctcatgatcaga 182 |||||||| | |||||| |||||||| || | ||||| || || ||||||||||| ||| Sbjct: 338 agcttgcccataacatgaagcacagcgacgaaagcaatgaaaccgatgctcatgataaga 279 Query: 183 acagcatttggggacatcttgcgcccagcagcctcatcggtgtagaactgaagcat 238 ||| |||| ||||| |||||| | |||| || ||||||||||||||||||||||| Sbjct: 278 acaacattgggggagatcttgagaccaggtgcgtcatcggtgtagaactgaagcat 223 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 297 cgcaagcttgcagctgcagctgcactccctct 328 |||| |||||||| |||||||||||| ||||| Sbjct: 161 cgcatgcttgcagttgcagctgcacttcctct 130
>gb|BT000904.1| Arabidopsis thaliana clone C105103 putative transport protein SEC61 beta-subunit (At2g45070) mRNA, complete cds Length = 280 Score = 79.8 bits (40), Expect = 7e-12 Identities = 97/116 (83%) Strand = Plus / Minus Query: 123 agcttgccgaaaacatggagcacagcaacaaccgcaataaaccctatgctcatgatcaga 182 |||||||| | |||||| |||||||| || | ||||| || || ||||||||||| ||| Sbjct: 233 agcttgcccataacatgaagcacagcgacgaaagcaatgaaaccgatgctcatgataaga 174 Query: 183 acagcatttggggacatcttgcgcccagcagcctcatcggtgtagaactgaagcat 238 ||| |||| ||||| |||||| | |||| || ||||||||||||||||||||||| Sbjct: 173 acaacattgggggagatcttgagaccaggtgcgtcatcggtgtagaactgaagcat 118 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 297 cgcaagcttgcagctgcagctgcactccctct 328 |||| |||||||| |||||||||||| ||||| Sbjct: 56 cgcatgcttgcagttgcagctgcacttcctct 25
>gb|AF370314.1| Arabidopsis thaliana At2g45070 mRNA sequence Length = 502 Score = 79.8 bits (40), Expect = 7e-12 Identities = 97/116 (83%) Strand = Plus / Minus Query: 123 agcttgccgaaaacatggagcacagcaacaaccgcaataaaccctatgctcatgatcaga 182 |||||||| | |||||| |||||||| || | ||||| || || ||||||||||| ||| Sbjct: 320 agcttgcccataacatgaagcacagcgacgaaagcaatgaaaccgatgctcatgataaga 261 Query: 183 acagcatttggggacatcttgcgcccagcagcctcatcggtgtagaactgaagcat 238 ||| |||| ||||| |||||| | |||| || ||||||||||||||||||||||| Sbjct: 260 acaacattgggggagatcttgagaccaggtgcgtcatcggtgtagaactgaagcat 205 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 297 cgcaagcttgcagctgcagctgcactccctct 328 |||| |||||||| |||||||||||| ||||| Sbjct: 143 cgcatgcttgcagttgcagctgcacttcctct 112
>emb|BX821208.1|CNS0AAA5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL25ZD10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 473 Score = 79.8 bits (40), Expect = 7e-12 Identities = 97/116 (83%) Strand = Plus / Minus Query: 123 agcttgccgaaaacatggagcacagcaacaaccgcaataaaccctatgctcatgatcaga 182 |||||||| | |||||| |||||||| || | ||||| || || ||||||||||| ||| Sbjct: 306 agcttgcccataacatgaagcacagcgacgaaagcaatgaaaccgatgctcatgataaga 247 Query: 183 acagcatttggggacatcttgcgcccagcagcctcatcggtgtagaactgaagcat 238 ||| |||| ||||| |||||| | |||| || ||||||||||||||||||||||| Sbjct: 246 acaacattgggggagatcttgagaccaggtgcgtcatcggtgtagaactgaagcat 191 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 297 cgcaagcttgcagctgcagctgcactccctct 328 |||| |||||||| |||||||||||| ||||| Sbjct: 129 cgcatgcttgcagttgcagctgcacttcctct 98
>emb|BX821175.1|CNS0AA9B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL21ZG12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 471 Score = 79.8 bits (40), Expect = 7e-12 Identities = 97/116 (83%) Strand = Plus / Minus Query: 123 agcttgccgaaaacatggagcacagcaacaaccgcaataaaccctatgctcatgatcaga 182 |||||||| | |||||| |||||||| || | ||||| || || ||||||||||| ||| Sbjct: 305 agcttgcccataacatgaagcacagcgacgaaagcaatgaaaccgatgctcatgataaga 246 Query: 183 acagcatttggggacatcttgcgcccagcagcctcatcggtgtagaactgaagcat 238 ||| |||| ||||| |||||| | |||| || ||||||||||||||||||||||| Sbjct: 245 acaacattgggggagatcttgagaccaggtgcgtcatcggtgtagaactgaagcat 190 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 297 cgcaagcttgcagctgcagctgcactccctctt 329 |||| |||||||| |||||||||||| |||||| Sbjct: 128 cgcatgcttgcagttgcagctgcacttcctctt 96
>gb|AC007659.2|AC007659 Arabidopsis thaliana chromosome II section 241 of 255 of the complete sequence. Sequence from clones T13E15, T14P1 Length = 87885 Score = 79.8 bits (40), Expect = 7e-12 Identities = 97/116 (83%) Strand = Plus / Plus Query: 123 agcttgccgaaaacatggagcacagcaacaaccgcaataaaccctatgctcatgatcaga 182 |||||||| | |||||| |||||||| || | ||||| || || ||||||||||| ||| Sbjct: 52852 agcttgcccataacatgaagcacagcgacgaaagcaatgaaaccgatgctcatgataaga 52911 Query: 183 acagcatttggggacatcttgcgcccagcagcctcatcggtgtagaactgaagcat 238 ||| |||| ||||| |||||| | |||| || ||||||||||||||||||||||| Sbjct: 52912 acaacattgggggagatcttgagaccaggtgcgtcatcggtgtagaactgaagcat 52967 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 297 cgcaagcttgcagctgcagctgcactccctct 328 |||| |||||||| |||||||||||| ||||| Sbjct: 53029 cgcatgcttgcagttgcagctgcacttcctct 53060
>emb|Z26753.1|ATSEC61B A.thaliana for Sec61 beta-subunit homolog Length = 527 Score = 79.8 bits (40), Expect = 7e-12 Identities = 97/116 (83%) Strand = Plus / Minus Query: 123 agcttgccgaaaacatggagcacagcaacaaccgcaataaaccctatgctcatgatcaga 182 |||||||| | |||||| |||||||| || | ||||| || || ||||||||||| ||| Sbjct: 308 agcttgcccataacatgaagcacagcgacgaaagcaatgaaaccgatgctcatgataaga 249 Query: 183 acagcatttggggacatcttgcgcccagcagcctcatcggtgtagaactgaagcat 238 ||| |||| ||||| |||||| | |||| || ||||||||||||||||||||||| Sbjct: 248 acaacattgggggagatcttgagaccaggtgcgtcatcggtgtagaactgaagcat 193 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 297 cgcaagcttgcagctgcagctgcactccctct 328 |||| |||||||| |||||||||||| ||||| Sbjct: 131 cgcatgcttgcagttgcagctgcacttcctct 100
>emb|BX821123.1|CNS0A98Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL17ZG02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 500 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Minus Query: 123 agcttgccgaaaacatggagcacagcaacaaccgcaataaaccctatgctcatgatcaga 182 |||||||| | |||||| |||||||| || | ||||| || || ||||||||||| ||| Sbjct: 369 agcttgcccataacatgaagcacagcgacgaaagcaatgaaaccgatgctcatgataaga 310 Query: 183 acagcatttggggacatcttgcgcccagcagcctcatcggtgtagaactgaagcat 238 ||| |||| ||||| |||||| | |||| || ||||||| ||||||||||||||| Sbjct: 309 acaacattgggggagatcttgagaccaggtgcgtcatcggcgtagaactgaagcat 254 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 297 cgcaagcttgcagctgcagctgcactccctct 328 |||| |||||||| |||||||||||| ||||| Sbjct: 192 cgcatgcttgcagttgcagctgcacttcctct 161
>emb|BX821903.1|CNS0AAEJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL83ZA07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 484 Score = 63.9 bits (32), Expect = 4e-07 Identities = 95/116 (81%) Strand = Plus / Minus Query: 123 agcttgccgaaaacatggagcacagcaacaaccgcaataaaccctatgctcatgatcaga 182 |||||||| | |||||| || ||||| || | ||||| || || ||||||||||| ||| Sbjct: 296 agcttgcccataacatgaagaacagcgacgaaagcaatgaaaccgatgctcatgataaga 237 Query: 183 acagcatttggggacatcttgcgcccagcagcctcatcggtgtagaactgaagcat 238 ||| |||| ||||| |||||| | ||| || ||||||||||||||||||||||| Sbjct: 236 acaacattgggggagatcttgagaacaggtgcgtcatcggtgtagaactgaagcat 181
>emb|BX819335.1|CNS0A9S5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB69ZH08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1126 Score = 63.9 bits (32), Expect = 4e-07 Identities = 95/116 (81%) Strand = Plus / Minus Query: 123 agcttgccgaaaacatggagcacagcaacaaccgcaataaaccctatgctcatgatcaga 182 |||||||| | |||||| |||||||| || | ||||| || || ||||||||||| ||| Sbjct: 1022 agcttgcccataacatgaagcacagcgacgaaagcaatgaaaccgatgctcatgataaga 963 Query: 183 acagcatttggggacatcttgcgcccagcagcctcatcggtgtagaactgaagcat 238 ||| |||| ||||| |||||| | ||| || | ||||||||||||||||||||| Sbjct: 962 acaacattgggggagatcttgagaacaggtgcgttatcggtgtagaactgaagcat 907 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 297 cgcaagcttgcagctgcagctgcactccctct 328 |||| |||||||| |||||||||||| ||||| Sbjct: 845 cgcatgcttgcagttgcagctgcacttcctct 814
>ref|NM_202738.1| Arabidopsis thaliana protein transporter AT3G60540 transcript variant AT3G60540.2 mRNA, complete cds Length = 903 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Minus Query: 135 acatggagcacagcaacaaccgcaataaaccctatgctcatgatcagaacagcatttggg 194 ||||| || ||||| |||| ||||| || || ||||||||||| |||||| ||||||| Sbjct: 700 acatgaagaacagctacaaaagcaatgaaaccaatgctcatgataagaacaacatttgga 641 Query: 195 gacatcttgcgcccagcagcctcatcggtgtagaactgaagcattgt 241 || |||||| | |||| || || || |||||||||||||||||||| Sbjct: 640 gatatcttgagaccaggcgcgtcgtctgtgtagaactgaagcattgt 594
>ref|NM_115918.2| Arabidopsis thaliana protein transporter AT3G60540 transcript variant AT3G60540.1 mRNA, complete cds Length = 481 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Minus Query: 135 acatggagcacagcaacaaccgcaataaaccctatgctcatgatcagaacagcatttggg 194 ||||| || ||||| |||| ||||| || || ||||||||||| |||||| ||||||| Sbjct: 278 acatgaagaacagctacaaaagcaatgaaaccaatgctcatgataagaacaacatttgga 219 Query: 195 gacatcttgcgcccagcagcctcatcggtgtagaactgaagcattgt 241 || |||||| | |||| || || || |||||||||||||||||||| Sbjct: 218 gatatcttgagaccaggcgcgtcgtctgtgtagaactgaagcattgt 172
>emb|AL138646.2|ATT8B10 Arabidopsis thaliana DNA chromosome 3, BAC clone T8B10 Length = 103787 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Plus Query: 135 acatggagcacagcaacaaccgcaataaaccctatgctcatgatcagaacagcatttggg 194 ||||| || ||||| |||| ||||| || || ||||||||||| |||||| ||||||| Sbjct: 76713 acatgaagaacagctacaaaagcaatgaaaccaatgctcatgataagaacaacatttgga 76772 Query: 195 gacatcttgcgcccagcagcctcatcggtgtagaactgaagcattgt 241 || |||||| | |||| || || || |||||||||||||||||||| Sbjct: 76773 gatatcttgagaccaggcgcgtcgtctgtgtagaactgaagcattgt 76819
>dbj|AK117782.1| Arabidopsis thaliana At3g60540 mRNA for putative transport protein subunit, complete cds, clone: RAFL17-47-H04 Length = 481 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Minus Query: 135 acatggagcacagcaacaaccgcaataaaccctatgctcatgatcagaacagcatttggg 194 ||||| || ||||| |||| ||||| || || ||||||||||| |||||| ||||||| Sbjct: 278 acatgaagaacagctacaaaagcaatgaaaccaatgctcatgataagaacaacatttgga 219 Query: 195 gacatcttgcgcccagcagcctcatcggtgtagaactgaagcattgt 241 || |||||| | |||| || || || |||||||||||||||||||| Sbjct: 218 gatatcttgagaccaggcgcgtcgtctgtgtagaactgaagcattgt 172
>ref|NM_208142.1| Eremothecium gossypii ABL158Cp (ABL158C), mRNA Length = 2190 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 252 gcaccacctccagcagcagcagcacca 278 ||||||||||||||||||||||||||| Sbjct: 1410 gcaccacctccagcagcagcagcacca 1436 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 ctccagcagcagcagcaccac 279 ||||||||||||||||||||| Sbjct: 1396 ctccagcagcagcagcaccac 1416
>gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome II, complete sequence Length = 867699 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 252 gcaccacctccagcagcagcagcacca 278 ||||||||||||||||||||||||||| Sbjct: 103220 gcaccacctccagcagcagcagcacca 103194 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 259 ctccagcagcagcagcaccac 279 ||||||||||||||||||||| Sbjct: 103234 ctccagcagcagcagcaccac 103214
>gb|BC014842.1| Homo sapiens nucleoporin 62kDa, transcript variant 4, mRNA (cDNA clone MGC:21169 IMAGE:4499630), complete cds Length = 2349 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 247 caccggcaccacctccagcagcagcagcaccac 279 ||||| ||||||| ||||||||||||||||||| Sbjct: 911 caccgccaccaccaccagcagcagcagcaccac 943
>ref|XM_717449.1| Candida albicans SC5314 hypothetical protein (CaO19_1494), mRNA Length = 1047 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 247 caccggcaccacctccagcagcagcagca 275 ||||||||||| ||||||||||||||||| Sbjct: 577 caccggcaccagctccagcagcagcagca 549
>ref|XM_717312.1| Candida albicans SC5314 hypothetical protein (CaO19_9071), mRNA Length = 1047 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 247 caccggcaccacctccagcagcagcagca 275 ||||||||||| ||||||||||||||||| Sbjct: 577 caccggcaccagctccagcagcagcagca 549
>gb|AY438537.1| Aedes polynesiensis microsatellite Ap6 sequence Length = 282 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 248 accggcaccacctccagcagcagcagcac 276 |||||||||||| |||||||||||||||| Sbjct: 171 accggcaccaccaccagcagcagcagcac 199
>gb|BC101104.1| Homo sapiens nucleoporin 62kDa, transcript variant 3, mRNA (cDNA clone MGC:119674 IMAGE:40011533), complete cds Length = 2042 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 247 caccggcaccacctccagcagcagcagcaccac 279 ||||| ||||||| ||||||||||||||||||| Sbjct: 1026 caccgccaccaccaccagcagcagcagcaccac 1058
>dbj|AK125857.1| Homo sapiens cDNA FLJ43869 fis, clone TESTI4008176, highly similar to Homo sapiens nucleoporin 62kDa (NUP62) Length = 3591 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 247 caccggcaccacctccagcagcagcagcaccac 279 ||||| ||||||| ||||||||||||||||||| Sbjct: 2720 caccgccaccaccaccagcagcagcagcaccac 2752
>ref|NM_012346.3| Homo sapiens nucleoporin 62kDa (NUP62), transcript variant 4, mRNA Length = 3253 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 247 caccggcaccacctccagcagcagcagcaccac 279 ||||| ||||||| ||||||||||||||||||| Sbjct: 1088 caccgccaccaccaccagcagcagcagcaccac 1120
>ref|NM_016553.3| Homo sapiens nucleoporin 62kDa (NUP62), transcript variant 2, mRNA Length = 3399 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 247 caccggcaccacctccagcagcagcagcaccac 279 ||||| ||||||| ||||||||||||||||||| Sbjct: 1234 caccgccaccaccaccagcagcagcagcaccac 1266
>ref|NM_153718.2| Homo sapiens nucleoporin 62kDa (NUP62), transcript variant 3, mRNA Length = 3277 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 247 caccggcaccacctccagcagcagcagcaccac 279 ||||| ||||||| ||||||||||||||||||| Sbjct: 1112 caccgccaccaccaccagcagcagcagcaccac 1144
>ref|NM_153719.2| Homo sapiens nucleoporin 62kDa (NUP62), transcript variant 1, mRNA Length = 3432 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 247 caccggcaccacctccagcagcagcagcaccac 279 ||||| ||||||| ||||||||||||||||||| Sbjct: 1267 caccgccaccaccaccagcagcagcagcaccac 1299
>emb|CR541721.1| Homo sapiens full open reading frame cDNA clone RZPDo834C0729D for gene NUP62, nucleoporin 62kDa; complete cds, without stopcodon Length = 1566 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 247 caccggcaccacctccagcagcagcagcaccac 279 ||||| ||||||| ||||||||||||||||||| Sbjct: 831 caccgccaccaccaccagcagcagcagcaccac 863
>gb|AC011452.6|AC011452 Homo sapiens chromosome 19 clone CTC-326K19, complete sequence Length = 146741 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 247 caccggcaccacctccagcagcagcagcaccac 279 ||||| ||||||| ||||||||||||||||||| Sbjct: 15481 caccgccaccaccaccagcagcagcagcaccac 15449
>dbj|AK000829.1| Homo sapiens cDNA FLJ20822 fis, clone ADSE00292, highly similar to X58521 Human mRNA for p62 nucleoporin Length = 2642 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 247 caccggcaccacctccagcagcagcagcaccac 279 ||||| ||||||| ||||||||||||||||||| Sbjct: 1204 caccgccaccaccaccagcagcagcagcaccac 1236
>gb|BC050717.2| Homo sapiens nucleoporin 62kDa, transcript variant 3, mRNA (cDNA clone MGC:60330 IMAGE:6021336), complete cds Length = 2476 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 247 caccggcaccacctccagcagcagcagcaccac 279 ||||| ||||||| ||||||||||||||||||| Sbjct: 1037 caccgccaccaccaccagcagcagcagcaccac 1069
>gb|AC122767.16| Mus musculus chromosome 7, clone RP24-143L4, complete sequence Length = 192484 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 252 gcaccacctccagcagcagcagcaccac 279 |||||||| ||||||||||||||||||| Sbjct: 89956 gcaccaccaccagcagcagcagcaccac 89983
>gb|AC116810.14| Mus musculus chromosome 1, clone RP24-355J5, complete sequence Length = 147130 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 253 caccacctccagcagcagcagcaccac 279 ||||||| ||||||||||||||||||| Sbjct: 23558 caccaccaccagcagcagcagcaccac 23532
>gb|BT017429.1| Zea mays clone EL01N0403C05.c mRNA sequence Length = 235 Score = 46.1 bits (23), Expect = 0.092 Identities = 29/31 (93%) Strand = Plus / Minus Query: 113 ggtgcggtacagcttgccgaaaacatggagc 143 ||||||||||||||| ||||| ||||||||| Sbjct: 39 ggtgcggtacagcttcccgaatacatggagc 9
>gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0063D09 map S1559, complete sequence Length = 190721 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 253 caccacctccagcagcagcagca 275 ||||||||||||||||||||||| Sbjct: 107857 caccacctccagcagcagcagca 107835
>gb|AC068605.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-284I15, complete sequence Length = 198551 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 253 caccacctccagcagcagcagcaccac 279 ||||||| ||||||||||||||||||| Sbjct: 197586 caccaccaccagcagcagcagcaccac 197560 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 255 ccacctccagcagcagcagcacca 278 ||||| |||||||||||||||||| Sbjct: 197437 ccaccaccagcagcagcagcacca 197414
>gb|AC035247.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-108D4, complete sequence Length = 204935 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 253 caccacctccagcagcagcagcaccac 279 ||||||| ||||||||||||||||||| Sbjct: 19234 caccaccaccagcagcagcagcaccac 19208 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 255 ccacctccagcagcagcagcacca 278 ||||| |||||||||||||||||| Sbjct: 19085 ccaccaccagcagcagcagcacca 19062
>gb|AC115890.8| Mus musculus chromosome 6, clone RP24-421B23, complete sequence Length = 191709 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 253 caccacctccagcagcagcagcaccac 279 ||||||| ||||||||||||||||||| Sbjct: 107199 caccaccaccagcagcagcagcaccac 107173 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 255 ccacctccagcagcagcagcacca 278 ||||| |||||||||||||||||| Sbjct: 107050 ccaccaccagcagcagcagcacca 107027
>ref|XM_980983.1| PREDICTED: Mus musculus hypothetical protein LOC670377 (LOC670377), mRNA Length = 1740 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 252 gcaccacctccagcagcagcagcacca 278 |||||||| |||||||||||||||||| Sbjct: 758 gcaccaccaccagcagcagcagcacca 784 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 ctccagcagcagcagcaccac 279 ||||||||||||||||||||| Sbjct: 744 ctccagcagcagcagcaccac 764
>ref|XM_979476.1| PREDICTED: Mus musculus hypothetical protein LOC665791 (LOC665791), mRNA Length = 585 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 252 gcaccacctccagcagcagcagcacca 278 |||||||| |||||||||||||||||| Sbjct: 515 gcaccaccaccagcagcagcagcacca 541 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 ctccagcagcagcagcaccac 279 ||||||||||||||||||||| Sbjct: 501 ctccagcagcagcagcaccac 521
>gb|AC112950.9| Mus musculus chromosome 1, clone RP23-288K15, complete sequence Length = 179084 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 252 gcaccacctccagcagcagcagcacca 278 |||||||| |||||||||||||||||| Sbjct: 54308 gcaccaccaccagcagcagcagcacca 54282
>gb|AC124364.4| Mus musculus BAC clone RP24-538E16 from chromosome 12, complete sequence Length = 177697 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 253 caccacctccagcagcagcagcaccac 279 ||||||| ||||||||||||||||||| Sbjct: 65218 caccaccaccagcagcagcagcaccac 65244
>ref|XM_793344.1| PREDICTED: Strongylocentrotus purpuratus similar to KIAA0999 protein (LOC593886), partial mRNA Length = 3313 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 253 caccacctccagcagcagcagca 275 ||||||||||||||||||||||| Sbjct: 2860 caccacctccagcagcagcagca 2882
>emb|AL353900.14| Human DNA sequence from clone RP11-202C2 on chromosome 10 Contains part of the gene for VPS10 domain receptor protein SORCS 3 (SORCS3), complete sequence Length = 158737 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 253 caccacctccagcagcagcagcaccac 279 ||||||| ||||||||||||||||||| Sbjct: 110243 caccaccaccagcagcagcagcaccac 110217
>ref|XM_794760.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC575814 (LOC575814), mRNA Length = 747 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 257 acctccagcagcagcagcaccac 279 ||||||||||||||||||||||| Sbjct: 309 acctccagcagcagcagcaccac 287
>ref|NM_132193.1| Drosophila melanogaster CG1514-RA (CG1514), mRNA Length = 4251 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 253 caccacctccagcagcagcagcaccac 279 ||||||| ||||||||||||||||||| Sbjct: 4076 caccaccaccagcagcagcagcaccac 4102
>gb|AY089224.1| Drosophila melanogaster AT01932 full insert cDNA Length = 4036 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 253 caccacctccagcagcagcagcaccac 279 ||||||| ||||||||||||||||||| Sbjct: 3842 caccaccaccagcagcagcagcaccac 3868
>gb|AC118231.9| Mus musculus chromosome 5, clone RP23-462J24, complete sequence Length = 186083 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 253 caccacctccagcagcagcagcaccac 279 ||||||| ||||||||||||||||||| Sbjct: 38808 caccaccaccagcagcagcagcaccac 38782
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 253 caccacctccagcagcagcagca 275 ||||||||||||||||||||||| Sbjct: 3740185 caccacctccagcagcagcagca 3740163
>gb|AC104512.11| Drosophila melanogaster BAC RP98-39C15 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 172654 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 253 caccacctccagcagcagcagcaccac 279 ||||||| ||||||||||||||||||| Sbjct: 25852 caccaccaccagcagcagcagcaccac 25826
>emb|AL844480.29| Mouse DNA sequence from clone RP23-190B10 on chromosome 4, complete sequence Length = 175199 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 252 gcaccacctccagcagcagcagcacca 278 |||||||| |||||||||||||||||| Sbjct: 109374 gcaccaccaccagcagcagcagcacca 109400 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 ctccagcagcagcagcaccac 279 ||||||||||||||||||||| Sbjct: 109360 ctccagcagcagcagcaccac 109380
>emb|CT009711.11| Mouse DNA sequence from clone RP23-128L22 on chromosome 13, complete sequence Length = 224715 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 253 caccacctccagcagcagcagcaccac 279 ||||||| ||||||||||||||||||| Sbjct: 121209 caccaccaccagcagcagcagcaccac 121235
>gb|AE003442.3| Drosophila melanogaster chromosome X, section 26 of 74 of the complete sequence Length = 316794 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 253 caccacctccagcagcagcagcaccac 279 ||||||| ||||||||||||||||||| Sbjct: 117820 caccaccaccagcagcagcagcaccac 117846
>gb|AC121139.20| Mus musculus chromosome 5, clone RP23-429G1, complete sequence Length = 206249 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 253 caccacctccagcagcagcagcaccac 279 ||||||| ||||||||||||||||||| Sbjct: 192658 caccaccaccagcagcagcagcaccac 192632
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 253 caccacctccagcagcagcagca 275 ||||||||||||||||||||||| Sbjct: 3748879 caccacctccagcagcagcagca 3748857 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 ccatcttgttttatctatct 371 |||||||||||||||||||| Sbjct: 4512352 ccatcttgttttatctatct 4512371
>dbj|AB071804.1| Oryza sativa (japonica cultivar-group) mRNA for transcription factor PCF3, partial cds Length = 1649 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 253 caccacctccagcagcagcagca 275 ||||||||||||||||||||||| Sbjct: 637 caccacctccagcagcagcagca 659
>gb|AC111074.4| Mus musculus chromosome 1, clone RP24-390A1, complete sequence Length = 124758 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 253 caccacctccagcagcagcagcacca 278 ||||||| |||||||||||||||||| Sbjct: 116638 caccaccaccagcagcagcagcacca 116613
>gb|AC108767.10| Mus musculus chromosome 3, clone RP24-377E5, complete sequence Length = 167878 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 246 gcaccggcaccacctccagcagcagcagca 275 ||||| |||||||| ||||||||||||||| Sbjct: 50396 gcaccagcaccaccaccagcagcagcagca 50425
>ref|XM_596733.2| PREDICTED: Bos taurus similar to Homeobox protein MOX-2 (Mesenchyme homeobox 2) (Growth arrest-specific homeobox) (LOC518540), mRNA Length = 2489 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 253 caccacctccagcagcagcagcacca 278 ||||||| |||||||||||||||||| Sbjct: 625 caccaccaccagcagcagcagcacca 650
>gb|AC118021.13| Mus musculus chromosome 7, clone RP23-459P15, complete sequence Length = 196441 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 254 accacctccagcagcagcagca 275 |||||||||||||||||||||| Sbjct: 53075 accacctccagcagcagcagca 53054
>ref|XM_419263.1| PREDICTED: Gallus gallus similar to mitogen-activated protein kinase 14 isoform 1; cytokine suppressive anti-inflammatory drug binding protein; Csaids binding protein; MAP kinase Mxi2; p38 mitogen activated protein kinase; p38 MAP kinase; p38alpha Exip; stress-activated pr... (LOC421183), mRNA Length = 3227 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 250 cggcaccacctccagcagcagcagca 275 ||||| |||||||||||||||||||| Sbjct: 533 cggcagcacctccagcagcagcagca 508
>ref|XM_324452.1| Neurospora crassa OR74A predicted protein (NCU05096.1) partial mRNA Length = 1290 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Minus Query: 250 cggcaccacctccagcagcagcagcaccac 279 |||||||||||||| ||||||| ||||||| Sbjct: 568 cggcaccacctccaccagcagcggcaccac 539 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Minus Query: 250 cggcaccacctccagcagcagcagcaccac 279 |||||||||||||| ||||||| ||||||| Sbjct: 481 cggcaccacctccaccagcagcggcaccac 452 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 252 gcaccacctccagcagcagcagcaccac 279 |||||||||||| |||||| |||||||| Sbjct: 1007 gcaccacctccaccagcagtagcaccac 980 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 252 gcaccacctccagcagcagcagcaccac 279 |||||||||||| |||||| |||||||| Sbjct: 515 gcaccacctccaccagcagtagcaccac 488
>ref|XM_951989.1| Neurospora crassa OR74A hypothetical protein (NCU05096.1) partial mRNA Length = 1290 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Minus Query: 250 cggcaccacctccagcagcagcagcaccac 279 |||||||||||||| ||||||| ||||||| Sbjct: 568 cggcaccacctccaccagcagcggcaccac 539 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Minus Query: 250 cggcaccacctccagcagcagcagcaccac 279 |||||||||||||| ||||||| ||||||| Sbjct: 481 cggcaccacctccaccagcagcggcaccac 452 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 252 gcaccacctccagcagcagcagcaccac 279 |||||||||||| |||||| |||||||| Sbjct: 1007 gcaccacctccaccagcagtagcaccac 980 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 252 gcaccacctccagcagcagcagcaccac 279 |||||||||||| |||||| |||||||| Sbjct: 515 gcaccacctccaccagcagtagcaccac 488
>gb|AC134434.4| Mus musculus BAC clone RP24-420E8 from chromosome 7, complete sequence Length = 214856 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 254 accacctccagcagcagcagcaccac 279 |||||| ||||||||||||||||||| Sbjct: 17827 accaccaccagcagcagcagcaccac 17852
>emb|CT010456.8| Mouse DNA sequence from clone RP23-96D14 on chromosome 12, complete sequence Length = 217223 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 253 caccacctccagcagcagcagcacca 278 ||||||| |||||||||||||||||| Sbjct: 188682 caccaccaccagcagcagcagcacca 188707
>ref|XM_539446.2| PREDICTED: Canis familiaris similar to Homeobox protein MOX-2 (Mesenchyme homeobox 2) (Growth arrest-specific homeobox) (LOC482329), mRNA Length = 1137 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 253 caccacctccagcagcagcagcacca 278 ||||||| |||||||||||||||||| Sbjct: 439 caccaccaccagcagcagcagcacca 464
>gb|AC127294.4| Mus musculus BAC clone RP23-386L1 from chromosome 3, complete sequence Length = 212556 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Minus Query: 246 gcaccggcaccacctccagcagcagcagca 275 ||||| |||||||| ||||||||||||||| Sbjct: 43774 gcaccagcaccaccaccagcagcagcagca 43745
>gb|AC124359.3| Mus musculus BAC clone RP24-495G2 from chromosome 1, complete sequence Length = 174750 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 253 caccacctccagcagcagcagcacca 278 ||||||| |||||||||||||||||| Sbjct: 113965 caccaccaccagcagcagcagcacca 113940
>ref|NM_017149.1| Rattus norvegicus mesenchyme homeobox 2 (Meox2), mRNA Length = 2244 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 253 caccacctccagcagcagcagcacca 278 ||||||| |||||||||||||||||| Sbjct: 425 caccaccaccagcagcagcagcacca 450
>emb|Z17223.1|RNGAXMR R.norvegicus mRNA encoding Gax protein Length = 2244 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 253 caccacctccagcagcagcagcacca 278 ||||||| |||||||||||||||||| Sbjct: 425 caccaccaccagcagcagcagcacca 450
>emb|Z16406.1|MOX2A Mus musculus Mox-2A mRNA Length = 1440 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 253 caccacctccagcagcagcagcacca 278 ||||||| |||||||||||||||||| Sbjct: 392 caccaccaccagcagcagcagcacca 417
>ref|NM_008584.1| Mus musculus mesenchyme homeobox 2 (Meox2), mRNA Length = 2349 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 253 caccacctccagcagcagcagcacca 278 ||||||| |||||||||||||||||| Sbjct: 515 caccaccaccagcagcagcagcacca 540
>emb|BX284752.1|NCB23B10 Neurospora crassa DNA linkage group II BAC contig B23B10 Length = 99967 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Minus Query: 250 cggcaccacctccagcagcagcagcaccac 279 |||||||||||||| ||||||| ||||||| Sbjct: 34421 cggcaccacctccaccagcagcggcaccac 34392 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Minus Query: 250 cggcaccacctccagcagcagcagcaccac 279 |||||||||||||| ||||||| ||||||| Sbjct: 34334 cggcaccacctccaccagcagcggcaccac 34305 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 252 gcaccacctccagcagcagcagcaccac 279 |||||||||||| |||||| |||||||| Sbjct: 34860 gcaccacctccaccagcagtagcaccac 34833 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 252 gcaccacctccagcagcagcagcaccac 279 |||||||||||| |||||| |||||||| Sbjct: 34368 gcaccacctccaccagcagtagcaccac 34341
>emb|AJ719744.1| Gallus gallus partial mRNA for hypothetical protein, clone 5p8 Length = 632 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 250 cggcaccacctccagcagcagcagca 275 ||||| |||||||||||||||||||| Sbjct: 75 cggcagcacctccagcagcagcagca 50
>dbj|AK142690.1| Mus musculus 16 days neonate heart cDNA, RIKEN full-length enriched library, clone:D830004A01 product:mesenchyme homeobox 2, full insert sequence Length = 2197 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 253 caccacctccagcagcagcagcacca 278 ||||||| |||||||||||||||||| Sbjct: 393 caccaccaccagcagcagcagcacca 418
>gb|AC159640.2| Mus musculus BAC clone RP24-70O22 from chromosome 12, complete sequence Length = 214955 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 253 caccacctccagcagcagcagcacca 278 ||||||| |||||||||||||||||| Sbjct: 155943 caccaccaccagcagcagcagcacca 155918
>dbj|AK028352.1| Mus musculus 18 days pregnant adult female placenta and extra embryonic tissue cDNA, RIKEN full-length enriched library, clone:3830404I06 product:mesenchyme homeobox 2, full insert sequence Length = 2349 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 253 caccacctccagcagcagcagcacca 278 ||||||| |||||||||||||||||| Sbjct: 515 caccaccaccagcagcagcagcacca 540
>dbj|AK031152.1| Mus musculus 13 days embryo forelimb cDNA, RIKEN full-length enriched library, clone:5930416C09 product:mesenchyme homeobox 2, full insert sequence Length = 2275 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 253 caccacctccagcagcagcagcacca 278 ||||||| |||||||||||||||||| Sbjct: 471 caccaccaccagcagcagcagcacca 496
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 253 caccacctccagcagcagcagcacca 278 ||||| |||||||||||||||||||| Sbjct: 14608044 caccatctccagcagcagcagcacca 14608069 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 ccacctccagcagcagcagc 274 |||||||||||||||||||| Sbjct: 25733105 ccacctccagcagcagcagc 25733086 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 caccacctccagcagcagcagcac 276 ||||||| |||||||||||||||| Sbjct: 4950272 caccaccaccagcagcagcagcac 4950249
>gb|AC016746.8| Homo sapiens BAC clone RP11-486F17 from 2, complete sequence Length = 186218 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 253 caccacctccagcagcagcagcacca 278 ||||||| |||||||||||||||||| Sbjct: 112572 caccaccaccagcagcagcagcacca 112547
>dbj|AP005653.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0075E08 Length = 130947 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 253 caccacctccagcagcagcagcacca 278 ||||| |||||||||||||||||||| Sbjct: 112060 caccatctccagcagcagcagcacca 112085
>gb|BC002076.1| Mus musculus mesenchyme homeobox 2, mRNA (cDNA clone MGC:6225 IMAGE:3591924), complete cds Length = 2229 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 253 caccacctccagcagcagcagcacca 278 ||||||| |||||||||||||||||| Sbjct: 413 caccaccaccagcagcagcagcacca 438
>gb|AC126434.4| Mus musculus BAC clone RP24-574E7 from 7, complete sequence Length = 206087 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 254 accacctccagcagcagcagcaccac 279 |||||| ||||||||||||||||||| Sbjct: 46770 accaccaccagcagcagcagcaccac 46745
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Minus Query: 247 caccggcaccacctccagcagcagcagcac 276 ||||||||||||||||||||| ||| |||| Sbjct: 3138582 caccggcaccacctccagcaggagccgcac 3138553
>gb|AC022346.4| Drosophila melanogaster clone BACR22I24, complete sequence Length = 181052 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 251 ggcaccacctccagcagcagc 271 ||||||||||||||||||||| Sbjct: 109563 ggcaccacctccagcagcagc 109543
>ref|XM_523827.1| PREDICTED: Pan troglodytes LOC468438 (LOC468438), mRNA Length = 2913 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 ccggcaccacctccagcagcagcag 273 ||||||||||| ||||||||||||| Sbjct: 1232 ccggcaccaccaccagcagcagcag 1256
>ref|NM_014240.1| Homo sapiens LIM domains containing 1 (LIMD1), mRNA Length = 5067 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 ccacctccagcagcagcagca 275 ||||||||||||||||||||| Sbjct: 186 ccacctccagcagcagcagca 206
>gb|AC114677.13| Mus musculus chromosome 18, clone RP24-213K19, complete sequence Length = 182311 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 247 caccggcaccacctccagcagcagcagcaccac 279 |||| |||||||| ||| ||||||||||||||| Sbjct: 175215 caccagcaccaccaccaccagcagcagcaccac 175247 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 253 caccacctccagcagcagcagcaccact 280 ||||||| |||||||||||| ||||||| Sbjct: 175224 caccaccaccagcagcagcaccaccact 175251
>gb|AC162693.5| Mus musculus chromosome 15, clone RP24-89G21, complete sequence Length = 159813 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 255 ccacctccagcagcagcagcaccac 279 ||||| ||||||||||||||||||| Sbjct: 159316 ccacccccagcagcagcagcaccac 159292
>gb|AC123722.8| Mus musculus chromosome 5, clone RP23-424O22, complete sequence Length = 205851 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 253 caccacctccagcagcagcagcaccactg 281 ||||||| ||||||||||||||| ||||| Sbjct: 86588 caccaccaccagcagcagcagcagcactg 86616
>gb|BC003663.2| Homo sapiens nucleoporin 62kDa, transcript variant 1, mRNA (cDNA clone MGC:841 IMAGE:3050260), complete cds Length = 2059 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 247 caccggcaccacctccagcagcagcagcaccac 279 ||||| ||||||| ||| ||||||||||||||| Sbjct: 1163 caccgccaccaccaccaccagcagcagcaccac 1195
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 259 ctccagcagcagcagcaccac 279 ||||||||||||||||||||| Sbjct: 7736904 ctccagcagcagcagcaccac 7736884 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 gtcatttgctatgcaaagtt 53 |||||||||||||||||||| Sbjct: 14160115 gtcatttgctatgcaaagtt 14160096 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 gcaccacctccagcagcagc 271 |||||||||||||||||||| Sbjct: 7779328 gcaccacctccagcagcagc 7779347
>gb|AC139223.8| Mus musculus chromosome 8, clone RP24-322F24, complete sequence Length = 180051 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 247 caccggcaccacctccagcagcagcagcaccac 279 |||| |||||||| |||||||||||| |||||| Sbjct: 149276 caccagcaccaccaccagcagcagcaccaccac 149308
>ref|XM_541912.2| PREDICTED: Canis familiaris similar to LIM domains containing protein 1 (LOC484796), mRNA Length = 2435 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 ccacctccagcagcagcagca 275 ||||||||||||||||||||| Sbjct: 632 ccacctccagcagcagcagca 652
>gb|AC124345.4| Mus musculus BAC clone RP24-459N19 from chromosome 15, complete sequence Length = 184532 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 255 ccacctccagcagcagcagcaccac 279 ||||| ||||||||||||||||||| Sbjct: 227 ccacccccagcagcagcagcaccac 203
>gb|AC126263.4| Mus musculus BAC clone RP23-359P12 from chromosome 8, complete sequence Length = 223991 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 247 caccggcaccacctccagcagcagcagcaccac 279 |||| ||| |||| ||||||||||||||||||| Sbjct: 189593 caccagcagcaccaccagcagcagcagcaccac 189561
>gb|AF538643.1| HIV-1 isolate NYUM-37 from Kenya nef protein (nef) gene, partial cds Length = 618 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 258 cctccagcagcagcagcacca 278 ||||||||||||||||||||| Sbjct: 70 cctccagcagcagcagcacca 90
>ref|XM_546599.2| PREDICTED: Canis familiaris similar to jumonji domain containing 3 (LOC489481), mRNA Length = 5371 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 ccggcaccacctccagcagcagcag 273 ||||||||||| ||||||||||||| Sbjct: 1427 ccggcaccaccaccagcagcagcag 1451
>emb|X69019.1|MMHOX35MR M.musculus Hox-3.5 mRNA Length = 1748 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 255 ccacctccagcagcagcagcaccac 279 ||||| ||||||||||||||||||| Sbjct: 108 ccacccccagcagcagcagcaccac 132
>gb|BC101107.1| Homo sapiens nucleoporin 62kDa, transcript variant 1, mRNA (cDNA clone MGC:119677 IMAGE:40011540), complete cds Length = 2197 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 247 caccggcaccacctccagcagcagcagcaccac 279 ||||| ||||||| ||| ||||||||||||||| Sbjct: 1181 caccgccaccaccaccaccagcagcagcaccac 1213
>gb|BC101105.1| Homo sapiens nucleoporin 62kDa, transcript variant 2, mRNA (cDNA clone MGC:119675 IMAGE:40011537), complete cds Length = 2164 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 247 caccggcaccacctccagcagcagcagcaccac 279 ||||| ||||||| ||| ||||||||||||||| Sbjct: 1148 caccgccaccaccaccaccagcagcagcaccac 1180
>gb|BC101106.1| Homo sapiens nucleoporin 62kDa, transcript variant 4, mRNA (cDNA clone MGC:119676 IMAGE:40011539), complete cds Length = 1951 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 247 caccggcaccacctccagcagcagcagcaccac 279 ||||| ||||||| ||| ||||||||||||||| Sbjct: 935 caccgccaccaccaccaccagcagcagcaccac 967
>gb|BC095410.1| Homo sapiens nucleoporin 62kDa, transcript variant 2, mRNA (cDNA clone MGC:110906 IMAGE:30335030), complete cds Length = 2629 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 247 caccggcaccacctccagcagcagcagcaccac 279 ||||| ||||||| ||| ||||||||||||||| Sbjct: 1195 caccgccaccaccaccaccagcagcagcaccac 1227
>emb|AJ312686.1|HSA312686 Homo sapiens partial LIMD1 gene for LIM domains containing 1, exons 1-2, complete sequence Length = 85000 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 ccacctccagcagcagcagca 275 ||||||||||||||||||||| Sbjct: 24472 ccacctccagcagcagcagca 24492
>emb|AJ132408.1|HSA132408 Homo sapiens mRNA for LIM domains containing protein 1 Length = 5067 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 ccacctccagcagcagcagca 275 ||||||||||||||||||||| Sbjct: 186 ccacctccagcagcagcagca 206
>gb|AC164631.5| Mus musculus 6 BAC RP23-359M3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 237469 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 ctccagcagcagcagcaccac 279 ||||||||||||||||||||| Sbjct: 76893 ctccagcagcagcagcaccac 76913
>gb|AC104581.22| Homo sapiens chromosome 17, clone RP11-1099M24, complete sequence Length = 187718 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 ccggcaccacctccagcagcagcag 273 ||||||||||| ||||||||||||| Sbjct: 10613 ccggcaccaccaccagcagcagcag 10637
>emb|AL162061.1|HSM802592 Homo sapiens mRNA; cDNA DKFZp547L134 (from clone DKFZp547L134) Length = 3200 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 247 caccggcaccacctccagcagcagcagcaccac 279 ||||| ||||||| ||| ||||||||||||||| Sbjct: 1036 caccgccaccaccaccaccagcagcagcaccac 1068
>emb|X58521.1|HSNP62 Human mRNA for p62 nucleoporin Length = 1840 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 247 caccggcaccacctccagcagcagcagcaccac 279 ||||| ||||||| ||| ||||||||||||||| Sbjct: 982 caccgccaccaccaccaccagcagcagcaccac 1014
>gb|AF464190.1| Petromyzon marinus homeodomain HOXW10A-like gene and Tcl-1 like transposon, complete sequence Length = 29612 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 caccggcaccacctccagcagcagcagca 275 |||| |||||||| ||||||||||||||| Sbjct: 1513 caccagcaccaccaccagcagcagcagca 1541
>ref|NM_167411.1| Drosophila melanogaster CG9413-RB, transcript variant B (CG9413), mRNA Length = 3446 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 251 ggcaccacctccagcagcagc 271 ||||||||||||||||||||| Sbjct: 1791 ggcaccacctccagcagcagc 1771
>ref|NM_132738.1| Drosophila melanogaster CG9413-RA, transcript variant A (CG9413), mRNA Length = 3296 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 251 ggcaccacctccagcagcagc 271 ||||||||||||||||||||| Sbjct: 1641 ggcaccacctccagcagcagc 1621
>gb|AC091735.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0082N11, from chromosome 10, complete sequence Length = 183345 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 ccacctccagcagcagcagca 275 ||||||||||||||||||||| Sbjct: 27028 ccacctccagcagcagcagca 27048
>dbj|AK141658.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030011O04 product:homeo box C4, full insert sequence Length = 2121 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 255 ccacctccagcagcagcagcaccac 279 ||||| ||||||||||||||||||| Sbjct: 644 ccacccccagcagcagcagcaccac 668
>gb|AC099539.2| Homo sapiens chromosome 3 clone RP11-107O13, complete sequence Length = 162616 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 255 ccacctccagcagcagcagca 275 ||||||||||||||||||||| Sbjct: 23520 ccacctccagcagcagcagca 23500
>ref|XM_941783.1| PREDICTED: Homo sapiens jumonji domain containing 3, transcript variant 3 (JMJD3), mRNA Length = 6701 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 ccggcaccacctccagcagcagcag 273 ||||||||||| ||||||||||||| Sbjct: 1557 ccggcaccaccaccagcagcagcag 1581
>ref|XM_043272.10| PREDICTED: Homo sapiens jumonji domain containing 3, transcript variant 1 (JMJD3), mRNA Length = 6694 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 ccggcaccacctccagcagcagcag 273 ||||||||||| ||||||||||||| Sbjct: 1551 ccggcaccaccaccagcagcagcag 1575
>gb|S62287.1| Hox 3 gene cluster: Hox3.5=homeobox [mice, BALB/c, liver, Genomic, 3433 nt] Length = 3433 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 255 ccacctccagcagcagcagcaccac 279 ||||| ||||||||||||||||||| Sbjct: 606 ccacccccagcagcagcagcaccac 630
>gb|AC022343.2|AC022343 Drosophila melanogaster, chromosome X, region 12E-12F, BAC clone BACR33F13, complete sequence Length = 164853 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 251 ggcaccacctccagcagcagc 271 ||||||||||||||||||||| Sbjct: 156193 ggcaccacctccagcagcagc 156213
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 ccacctccagcagcagcagca 275 ||||||||||||||||||||| Sbjct: 7393164 ccacctccagcagcagcagca 7393184
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 259 ctccagcagcagcagcaccac 279 ||||||||||||||||||||| Sbjct: 7734739 ctccagcagcagcagcaccac 7734719 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 gtcatttgctatgcaaagtt 53 |||||||||||||||||||| Sbjct: 14155090 gtcatttgctatgcaaagtt 14155071 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 gcaccacctccagcagcagc 271 |||||||||||||||||||| Sbjct: 7777163 gcaccacctccagcagcagc 7777182
>emb|BX819075.1|CNS0A9V6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB43ZF01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 454 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 218 atcggtgtagaactgaagcat 238 ||||||||||||||||||||| Sbjct: 212 atcggtgtagaactgaagcat 192
>ref|NM_001003127.1| Canis familiaris Y-box protein ZONAB-A (ZONAB), mRNA Length = 1800 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 caccggcaccacctccagcagcagcagca 275 ||||||||||||| |||||||||||||| Sbjct: 267 caccggcaccaccagcagcagcagcagca 295
>gb|AC021667.21|AC021667 Mus musculus, clone RP23-304J12, complete sequence Length = 203106 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 255 ccacctccagcagcagcagcaccac 279 ||||| ||||||||||||||||||| Sbjct: 137319 ccacccccagcagcagcagcaccac 137343
>gb|AF110134.1|AF110134 Volvox carteri f. nagariensis GlsA (glsA) gene, complete cds Length = 8337 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 247 caccggcaccacctccagcagcagcagca 275 ||||| ||||||| ||||||||||||||| Sbjct: 4288 caccgtcaccaccgccagcagcagcagca 4260
>gb|AF171062.1|AF171062 Canis familiaris Y-box protein ZONAB-B (ZONAB) mRNA, complete cds Length = 1119 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 caccggcaccacctccagcagcagcagca 275 ||||||||||||| |||||||||||||| Sbjct: 21 caccggcaccaccagcagcagcagcagca 49
>gb|AF171061.1|AF171061 Canis familiaris Y-box protein ZONAB-A (ZONAB) mRNA, complete cds Length = 1800 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 caccggcaccacctccagcagcagcagca 275 ||||||||||||| |||||||||||||| Sbjct: 267 caccggcaccaccagcagcagcagcagca 295
>ref|XM_315118.2| Anopheles gambiae str. PEST ENSANGP00000015275 (ENSANGG00000012786), partial mRNA Length = 1011 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 253 caccacctccagcagcagcagcacc 277 ||||||||||| ||||||||||||| Sbjct: 934 caccacctccatcagcagcagcacc 958
>gb|BT021215.1| Drosophila melanogaster RH65810 full insert cDNA Length = 3245 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 251 ggcaccacctccagcagcagc 271 ||||||||||||||||||||| Sbjct: 1573 ggcaccacctccagcagcagc 1553
>gb|AC148872.2| Chlamydomonas reinhardtii clone cr-25P21, complete sequence Length = 45702 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 253 caccacctccagcagcagcagcacc 277 ||||||| ||||||||||||||||| Sbjct: 16343 caccaccaccagcagcagcagcacc 16367
>gb|AE003496.4| Drosophila melanogaster chromosome X, section 48 of 74 of the complete sequence Length = 299868 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 251 ggcaccacctccagcagcagc 271 ||||||||||||||||||||| Sbjct: 98346 ggcaccacctccagcagcagc 98366
>gb|AC102618.19| Mus musculus chromosome 18, clone RP23-426G16, complete sequence Length = 242449 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 247 caccggcaccacctccagcagcagcagcaccac 279 |||| |||||||| ||| ||||||||||||||| Sbjct: 167910 caccagcaccaccaccaccagcagcagcaccac 167878 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 253 caccacctccagcagcagcagcaccact 280 ||||||| |||||||||||| ||||||| Sbjct: 167901 caccaccaccagcagcagcaccaccact 167874
>dbj|AP002768.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-673F18, complete sequence Length = 186084 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 252 gcaccacctccagcagcagcagcac 276 |||||||| |||||||||||||||| Sbjct: 99769 gcaccaccaccagcagcagcagcac 99745
>ref|NM_013553.1| Mus musculus homeo box C4 (Hoxc4), mRNA Length = 1748 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 255 ccacctccagcagcagcagcaccac 279 ||||| ||||||||||||||||||| Sbjct: 108 ccacccccagcagcagcagcaccac 132
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 ccacctccagcagcagcagca 275 ||||||||||||||||||||| Sbjct: 7397363 ccacctccagcagcagcagca 7397383
>gb|AC147558.3| Mus musculus BAC clone RP23-470N2 from 8, complete sequence Length = 212626 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 247 caccggcaccacctccagcagcagcagcaccac 279 |||| ||| |||| ||||||||||||||||||| Sbjct: 174080 caccagcagcaccaccagcagcagcagcaccac 174112
>gb|AC118672.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0078P24, from chromosome 3, complete sequence Length = 146930 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 ctccagcagcagcagcaccac 279 ||||||||||||||||||||| Sbjct: 115890 ctccagcagcagcagcaccac 115910 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 gcaccacctccagcagcagc 271 |||||||||||||||||||| Sbjct: 73466 gcaccacctccagcagcagc 73447
>gb|AY720768.1| Harknessia protearum strain CBS 111831 beta-tubulin (tub2) gene, exons 2 through 6 and partial cds Length = 870 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 258 cctccagcagcagcagcacca 278 ||||||||||||||||||||| Sbjct: 273 cctccagcagcagcagcacca 293
>gb|AY720767.1| Harknessia protearum strain CBS 111830 beta-tubulin (tub2) gene, exons 2 through 6 and partial cds Length = 870 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 258 cctccagcagcagcagcacca 278 ||||||||||||||||||||| Sbjct: 273 cctccagcagcagcagcacca 293
>gb|AY720766.1| Harknessia protearum strain CBS 112616 beta-tubulin (tub2) gene, exons 2 through 6 and partial cds Length = 868 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 258 cctccagcagcagcagcacca 278 ||||||||||||||||||||| Sbjct: 273 cctccagcagcagcagcacca 293
>gb|AY720765.1| Harknessia protearum strain CBS 112617 beta-tubulin (tub2) gene, exons 2 through 6 and partial cds Length = 870 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 258 cctccagcagcagcagcacca 278 ||||||||||||||||||||| Sbjct: 273 cctccagcagcagcagcacca 293
>gb|AY720764.1| Harknessia protearum strain CBS 112618 beta-tubulin (tub2) gene, exons 2 through 6 and partial cds Length = 870 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 258 cctccagcagcagcagcacca 278 ||||||||||||||||||||| Sbjct: 273 cctccagcagcagcagcacca 293
>gb|AY720763.1| Harknessia leucospermi strain CBS 112619 beta-tubulin (tub2) gene, exons 2 through 6 and partial cds Length = 872 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 258 cctccagcagcagcagcacca 278 ||||||||||||||||||||| Sbjct: 273 cctccagcagcagcagcacca 293
>gb|AY720762.1| Harknessia leucospermi strain CBS 112620 beta-tubulin (tub2) gene, exons 2 through 6 and partial cds Length = 873 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 258 cctccagcagcagcagcacca 278 ||||||||||||||||||||| Sbjct: 273 cctccagcagcagcagcacca 293
>gb|AY720761.1| Harknessia leucospermi strain CPC 5400 beta-tubulin (tub2) gene, exons 2 through 6 and partial cds Length = 874 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 258 cctccagcagcagcagcacca 278 ||||||||||||||||||||| Sbjct: 273 cctccagcagcagcagcacca 293
>gb|AY720760.1| Harknessia leucospermi strain CPC 2849 beta-tubulin (tub2) gene, exons 2 through 6 and partial cds Length = 870 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 258 cctccagcagcagcagcacca 278 ||||||||||||||||||||| Sbjct: 272 cctccagcagcagcagcacca 292
>gb|AY720759.1| Harknessia leucospermi strain CBS 775.97 beta-tubulin (tub2) gene, exons 2 through 6 and partial cds Length = 873 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 258 cctccagcagcagcagcacca 278 ||||||||||||||||||||| Sbjct: 273 cctccagcagcagcagcacca 293
>gb|AY720751.1| Harknessia capensis strain CBS 111829 beta-tubulin (tub2) gene, exons 2 through 6 and partial cds Length = 872 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 258 cctccagcagcagcagcacca 278 ||||||||||||||||||||| Sbjct: 273 cctccagcagcagcagcacca 293
>gb|AY720750.1| Harknessia capensis strain CBS 115061 beta-tubulin (tub2) gene, exons 2 through 6 and partial cds Length = 817 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 258 cctccagcagcagcagcacca 278 ||||||||||||||||||||| Sbjct: 273 cctccagcagcagcagcacca 293
>gb|M80651.1|HUMCEI5A Hum ORF (CEI5) mRNA, 3' flank Length = 2737 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 ccacctccagcagcagcagca 275 ||||||||||||||||||||| Sbjct: 691 ccacctccagcagcagcagca 711
>dbj|D11328.1|MUSHOX35A Mouse Hox 3.5 gene, complete cds Length = 3855 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 255 ccacctccagcagcagcagcaccac 279 ||||| ||||||||||||||||||| Sbjct: 648 ccacccccagcagcagcagcaccac 672
>dbj|AB002344.2| Human mRNA for KIAA0346 gene, partial cds Length = 6698 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 ccggcaccacctccagcagcagcag 273 ||||||||||| ||||||||||||| Sbjct: 1562 ccggcaccaccaccagcagcagcag 1586
>gb|DQ238862.1| Danio rerio WW domain containing transcription regulator 1 (wwtr1) mRNA, complete cds Length = 1401 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 cacctccagcagcagcagca 275 |||||||||||||||||||| Sbjct: 684 cacctccagcagcagcagca 703
>gb|AC102501.9| Mus musculus chromosome 5, clone RP24-315J23, complete sequence Length = 207791 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 caccacctccagcagcagcagcac 276 ||||||| |||||||||||||||| Sbjct: 49235 caccaccaccagcagcagcagcac 49258
>gb|AC102717.11| Mus musculus chromosome 5, clone RP24-576B5, complete sequence Length = 161299 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 caccacctccagcagcagcagcac 276 ||||||| |||||||||||||||| Sbjct: 77944 caccaccaccagcagcagcagcac 77921
>ref|XM_641004.1| Dictyostelium discoideum hypothetical protein (DDB0190385), partial mRNA Length = 4161 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tccagcagcagcagcaccac 279 |||||||||||||||||||| Sbjct: 3150 tccagcagcagcagcaccac 3169
>gb|AC009388.5| Drosophila melanogaster clone BACR11P22, complete sequence Length = 172362 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 cacctccagcagcagcagca 275 |||||||||||||||||||| Sbjct: 161693 cacctccagcagcagcagca 161712
>ref|XM_464401.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1319 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 caccacctccagcagcagcagcac 276 ||||||| |||||||||||||||| Sbjct: 845 caccaccaccagcagcagcagcac 868
>gb|AC113005.10| Mus musculus chromosome 3, clone RP23-299B23, complete sequence Length = 218917 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 255 ccacctccagcagcagcagcacca 278 ||||| |||||||||||||||||| Sbjct: 86098 ccaccaccagcagcagcagcacca 86075
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 cacctccagcagcagcagca 275 |||||||||||||||||||| Sbjct: 182841 cacctccagcagcagcagca 182860
>gb|BT016080.1| Drosophila melanogaster LP01489 full insert cDNA Length = 5304 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 cacctccagcagcagcagca 275 |||||||||||||||||||| Sbjct: 1177 cacctccagcagcagcagca 1196
>gb|BT016033.1| Drosophila melanogaster RE02556 full insert cDNA Length = 5137 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 cacctccagcagcagcagca 275 |||||||||||||||||||| Sbjct: 1017 cacctccagcagcagcagca 1036
>gb|AC161496.6| Mus musculus chromosome 3, clone RP23-119A9, complete sequence Length = 203655 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 255 ccacctccagcagcagcagcacca 278 ||||| |||||||||||||||||| Sbjct: 27402 ccaccaccagcagcagcagcacca 27425
>gb|AC134046.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0040G18, complete sequence Length = 172281 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 ccatcttgttttatctatct 371 |||||||||||||||||||| Sbjct: 159441 ccatcttgttttatctatct 159422
>gb|BC073367.1| Xenopus laevis MGC80788 protein, mRNA (cDNA clone MGC:80788 IMAGE:5513391), complete cds Length = 2655 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 cagcagcagcagcaccactg 281 |||||||||||||||||||| Sbjct: 391 cagcagcagcagcaccactg 410
>ref|XM_361487.1| Magnaporthe grisea 70-15 hypothetical protein (MG03961.4) partial mRNA Length = 822 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ccagcagcagcagcaccact 280 |||||||||||||||||||| Sbjct: 154 ccagcagcagcagcaccact 173
>ref|XM_364800.1| Magnaporthe grisea 70-15 hypothetical protein (MG09645.4) partial mRNA Length = 6354 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 gcaccacctccagcagcagc 271 |||||||||||||||||||| Sbjct: 256 gcaccacctccagcagcagc 237
>ref|XM_368807.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00437.4) partial mRNA Length = 1179 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 cctccagcagcagcagcacc 277 |||||||||||||||||||| Sbjct: 599 cctccagcagcagcagcacc 618
>ref|XM_417683.1| PREDICTED: Gallus gallus similar to guanosine-diphosphatase like protein (LOC419531), mRNA Length = 3414 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 tccagcagcagcagcaccac 279 |||||||||||||||||||| Sbjct: 110 tccagcagcagcagcaccac 91
>gb|BC077254.1| Xenopus laevis transcription factor Tbx3, mRNA (cDNA clone MGC:79891 IMAGE:3400653), complete cds Length = 4112 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 cacctccagcagcagcagca 275 |||||||||||||||||||| Sbjct: 1749 cacctccagcagcagcagca 1768
>gb|DQ338462.1| Nephila antipodiana clone 145 minor ampullate fibroin 1 mRNA, partial cds Length = 1189 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 244 tggcaccggcaccacctccagcagcagcagca 275 |||| ||||| ||| ||||||||||||||||| Sbjct: 639 tggctccggcgccagctccagcagcagcagca 608
>gb|AC123071.3| Mus musculus BAC clone RP23-70P8 from chromosome 13, complete sequence Length = 252384 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 tcagcttgtatatatggaac 103 |||||||||||||||||||| Sbjct: 58350 tcagcttgtatatatggaac 58369
>ref|XM_877010.1| PREDICTED: Bos taurus similar to AF-10 protein, transcript variant 7 (LOC519864), mRNA Length = 5070 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 252 gcaccacctccagcagcagcagcaccac 279 |||||||| |||||||||||||||||| Sbjct: 3156 gcaccaccagcagcagcagcagcaccac 3183
>ref|XM_876963.1| PREDICTED: Bos taurus similar to AF-10 protein, transcript variant 6 (LOC519864), mRNA Length = 5148 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 252 gcaccacctccagcagcagcagcaccac 279 |||||||| |||||||||||||||||| Sbjct: 3234 gcaccaccagcagcagcagcagcaccac 3261
>ref|XM_876906.1| PREDICTED: Bos taurus similar to AF-10 protein, transcript variant 5 (LOC519864), mRNA Length = 5085 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 252 gcaccacctccagcagcagcagcaccac 279 |||||||| |||||||||||||||||| Sbjct: 3171 gcaccaccagcagcagcagcagcaccac 3198
>ref|XM_598095.2| PREDICTED: Bos taurus similar to AF-10 protein, transcript variant 1 (LOC519864), mRNA Length = 4827 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 252 gcaccacctccagcagcagcagcaccac 279 |||||||| |||||||||||||||||| Sbjct: 2913 gcaccaccagcagcagcagcagcaccac 2940
>ref|XM_876784.1| PREDICTED: Bos taurus similar to AF-10 protein, transcript variant 4 (LOC519864), mRNA Length = 4875 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 252 gcaccacctccagcagcagcagcaccac 279 |||||||| |||||||||||||||||| Sbjct: 2961 gcaccaccagcagcagcagcagcaccac 2988
>ref|XM_865695.1| PREDICTED: Bos taurus similar to AF-10 protein, transcript variant 2 (LOC519864), mRNA Length = 5181 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 252 gcaccacctccagcagcagcagcaccac 279 |||||||| |||||||||||||||||| Sbjct: 3267 gcaccaccagcagcagcagcagcaccac 3294
>ref|XM_952316.1| Neurospora crassa OR74A hypothetical protein (NCU07184.1) partial mRNA Length = 591 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 252 gcaccacctccagcagcagcagca 275 |||||||| ||||||||||||||| Sbjct: 405 gcaccaccaccagcagcagcagca 428
>ref|XM_327469.1| Neurospora crassa OR74A hypothetical protein (NCU07184.1) partial mRNA Length = 591 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 252 gcaccacctccagcagcagcagca 275 |||||||| ||||||||||||||| Sbjct: 405 gcaccaccaccagcagcagcagca 428
>gb|AC098571.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_B10, complete sequence Length = 127304 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 agcttgcagctgcagctgca 320 |||||||||||||||||||| Sbjct: 41452 agcttgcagctgcagctgca 41471
>gb|AC157361.7| Mus musculus chromosome 7, clone RP23-207H22, complete sequence Length = 188319 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 caccacctccagcagcagcagcac 276 ||||||| |||||||||||||||| Sbjct: 11178 caccaccaccagcagcagcagcac 11155
>ref|NM_001032748.1| Takifugu rubripes Nemo-like kinase (NLK), mRNA Length = 2998 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 gcaccacctccagcagcagc 271 |||||||||||||||||||| Sbjct: 551 gcaccacctccagcagcagc 570
>gb|AC004992.2| Homo sapiens PAC clone RP5-1189K17 from 7, complete sequence Length = 92869 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 cagcagcagcagcaccactg 281 |||||||||||||||||||| Sbjct: 2166 cagcagcagcagcaccactg 2147
>gb|AC023818.5| Homo sapiens chromosome 16 clone CTD-2600H12, complete sequence Length = 173304 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 cagcagcagcagcaccactg 281 |||||||||||||||||||| Sbjct: 24604 cagcagcagcagcaccactg 24623
>gb|AC123049.4| Mus musculus BAC clone RP24-360B3 from chromosome 5, complete sequence Length = 166292 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 cagcagcagcagcaccactg 281 |||||||||||||||||||| Sbjct: 58946 cagcagcagcagcaccactg 58927
>ref|XM_803006.1| Trypanosoma cruzi strain CL Brener inositol polyphosphate kinase-like protein (Tc00.1047053506985.60) partial mRNA Length = 2187 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 252 gcaccacctccagcagcagcagca 275 |||||||| ||||||||||||||| Sbjct: 24 gcaccaccaccagcagcagcagca 47
>ref|XM_803101.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510075.30) partial mRNA Length = 5214 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ccagcagcagcagcaccact 280 |||||||||||||||||||| Sbjct: 3491 ccagcagcagcagcaccact 3472
>gb|AC130819.4| Mus musculus BAC clone RP23-118O2 from chromosome 19, complete sequence Length = 223575 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 252 gcaccacctccagcagcagcagca 275 |||||||| ||||||||||||||| Sbjct: 156956 gcaccaccaccagcagcagcagca 156933
>ref|XM_808589.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053506801.40) partial mRNA Length = 1122 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 254 accacctccagcagcagcagcacc 277 |||||| ||||||||||||||||| Sbjct: 477 accaccaccagcagcagcagcacc 454
>gb|AY044175.1| Rana pipiens retinal PDE6 beta subunit (PDE6B) mRNA, complete cds Length = 2574 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 ccacctccagcagcagcagc 274 |||||||||||||||||||| Sbjct: 2531 ccacctccagcagcagcagc 2512
>gb|AC138642.10| Mus musculus chromosome 3, clone RP23-21O7, complete sequence Length = 252108 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 ccacctccagcagcagcagc 274 |||||||||||||||||||| Sbjct: 72237 ccacctccagcagcagcagc 72218
>gb|AY375489.1| Drosophila melanogaster loner ISO3 (loner) mRNA, complete cds Length = 4652 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 cacctccagcagcagcagca 275 |||||||||||||||||||| Sbjct: 545 cacctccagcagcagcagca 564
>gb|AY375488.1| Drosophila melanogaster loner ISO2 (loner) mRNA, complete cds Length = 5072 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 cacctccagcagcagcagca 275 |||||||||||||||||||| Sbjct: 965 cacctccagcagcagcagca 984
>gb|AY375487.1| Drosophila melanogaster loner ISO1 (loner) mRNA, complete cds Length = 5124 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 cacctccagcagcagcagca 275 |||||||||||||||||||| Sbjct: 1017 cacctccagcagcagcagca 1036
>emb|X63729.1|DMAPROB D.melanogaster alternative proboscipedia mRNA Length = 2418 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 cacctccagcagcagcagcaccac 279 |||| ||||||||||||||||||| Sbjct: 1711 caccaccagcagcagcagcaccac 1734
>emb|X63728.1|DMPROB D.melanogaster proboscipedia mRNA Length = 3735 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 cacctccagcagcagcagcaccac 279 |||| ||||||||||||||||||| Sbjct: 2682 caccaccagcagcagcagcaccac 2705
>gb|AC139746.15| Medicago truncatula clone mth2-17b20, complete sequence Length = 118157 Score = 40.1 bits (20), Expect = 5.7 Identities = 44/52 (84%) Strand = Plus / Plus Query: 187 catttggggacatcttgcgcccagcagcctcatcggtgtagaactgaagcat 238 |||||||||| |||||| | |||| || ||||| ||||| ||||||||||| Sbjct: 30985 catttggggatatcttgagtccaggggcatcatcagtgtaaaactgaagcat 31036
>gb|AC148177.13| Medicago truncatula clone mth2-4c9, complete sequence Length = 117329 Score = 40.1 bits (20), Expect = 5.7 Identities = 44/52 (84%) Strand = Plus / Plus Query: 187 catttggggacatcttgcgcccagcagcctcatcggtgtagaactgaagcat 238 |||||||||| |||||| | |||| || ||||| ||||| ||||||||||| Sbjct: 88752 catttggggatatcttgagtccaggggcatcatcagtgtaaaactgaagcat 88803
>emb|AL669830.9| Human DNA sequence from clone XXbac-118E17 on chromosome 6 contains the GTF2H4 gene for general transcription factor IIH, polypeptide 4, 52kDa, the gene for KIAA1885 protein, the gene for a novel protein, three putative novel transcripts, the gene for DPCR1 protein and six CpG islands, complete sequence Length = 156272 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ccagcagcagcagcaccact 280 |||||||||||||||||||| Sbjct: 17793 ccagcagcagcagcaccact 17774
>emb|AL662854.7| Human DNA sequence from clone XXbac-105N19 on chromosome 6 contains the DDR1 gene for discoidin domain receptor family, member 1, the GTF2H4 gene for general transcrition factor IIH, polypeptide 4, 52kDa, the gene for KIAA1885 protein, two putative novel transcripts, the gene for DPCR1 protein and four CpG islands, complete sequence Length = 84474 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ccagcagcagcagcaccact 280 |||||||||||||||||||| Sbjct: 48455 ccagcagcagcagcaccact 48436
>ref|XM_776583.1| PREDICTED: Strongylocentrotus purpuratus similar to eukaryotic translation initiation factor 4E nuclear import factor 1 (LOC576259), mRNA Length = 4080 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 cacctccagcagcagcagca 275 |||||||||||||||||||| Sbjct: 3712 cacctccagcagcagcagca 3731
>emb|BX032885.1|CNS08XJD Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA49AC04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 468 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tccagcagcagcagcaccac 279 |||||||||||||||||||| Sbjct: 377 tccagcagcagcagcaccac 396
>emb|BX032155.1|CNS08WZ3 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA47DF04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 903 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 cacctccagcagcagcagcaccac 279 ||||||||||||||| |||||||| Sbjct: 426 cacctccagcagcagtagcaccac 403
>emb|BX027645.1|CNS08THT Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA41BE02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 738 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 caccacctccagcagcagcagcac 276 ||||||||||| |||||||||||| Sbjct: 250 caccacctccaccagcagcagcac 273
>emb|BX006665.1|CNS08DB1 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA11BA08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 930 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 cacctccagcagcagcagcaccac 279 ||||||||||||||| |||||||| Sbjct: 424 cacctccagcagcagtagcaccac 401
>gb|AC073153.16| Mus musculus Strain C57BL6/J chromosome 19 BAC, RP23-49P8 Complete Sequence, complete sequence Length = 220143 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 252 gcaccacctccagcagcagcagca 275 |||||||| ||||||||||||||| Sbjct: 14676 gcaccaccaccagcagcagcagca 14653
>gb|AC164558.2| Mus musculus BAC clone RP23-238F5 from chromosome 16, complete sequence Length = 186421 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ccagcagcagcagcaccact 280 |||||||||||||||||||| Sbjct: 81568 ccagcagcagcagcaccact 81549
>gb|AY862884.1| Moraxella catarrhalis strain V1171 adhesin (hag) gene, complete cds Length = 7162 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 cacctccagcagcagcagca 275 |||||||||||||||||||| Sbjct: 251 cacctccagcagcagcagca 232
>emb|BX294027.1|NCB8G12 Neurospora crassa DNA linkage group V BAC contig B8G12 Length = 154038 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 252 gcaccacctccagcagcagcagca 275 |||||||| ||||||||||||||| Sbjct: 116521 gcaccaccaccagcagcagcagca 116544
>emb|AL606695.3|OSJN00112 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0103I08, complete sequence Length = 140449 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 caccacctccagcagcagca 272 |||||||||||||||||||| Sbjct: 40303 caccacctccagcagcagca 40322
>emb|AL627423.27| Zebrafish DNA sequence from clone RP71-1O24 in linkage group 1, complete sequence Length = 133325 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 cacctccagcagcagcagca 275 |||||||||||||||||||| Sbjct: 47760 cacctccagcagcagcagca 47741
>emb|AL663055.13| Mouse DNA sequence from clone RP23-102H8 on chromosome 11 Contains the 5' end of the Gria1 gene for glutamate receptor, ionotropic, AMPA1 (alpha 1), complete sequence Length = 202981 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 tccagcagcagcagcaccac 279 |||||||||||||||||||| Sbjct: 44783 tccagcagcagcagcaccac 44764
>emb|AL731896.10| Mouse DNA sequence from clone RP23-348D11 on chromosome 11 Contains a ribosomal protein L15 (Rpl15) pseudogene and a SNARE protein Ykt (0610042I15Rik) pseudogene, complete sequence Length = 226786 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 cacctccagcagcagcagcaccac 279 |||| ||||||||||||||||||| Sbjct: 147120 caccaccagcagcagcagcaccac 147097
>emb|AL731827.6| Mouse DNA sequence from clone RP23-109M24 on chromosome 11, complete sequence Length = 115109 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 253 caccacctccagcagcagcagcaccact 280 ||||||| ||||||||||||||| |||| Sbjct: 41124 caccaccaccagcagcagcagcagcact 41151
>emb|CR759747.7| Human DNA sequence from clone DADB-160J14 on chromosome 6, complete sequence Length = 114883 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ccagcagcagcagcaccact 280 |||||||||||||||||||| Sbjct: 39852 ccagcagcagcagcaccact 39833
>gb|AC010009.7| Drosophila melanogaster 3L BAC RP98-23D16 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 195757 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 252 gcaccacctccagcagcagcagcaccac 279 |||||||| |||||||||||||||||| Sbjct: 180317 gcaccaccagcagcagcagcagcaccac 180290 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 252 gcaccacctccagcagcagcagcaccac 279 |||||||| |||||||||||||||||| Sbjct: 180296 gcaccaccagcagcagcagcagcaccac 180269
>gb|AC125784.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0012F18, from chromosome 3, complete sequence Length = 122903 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 gtcatttgctatgcaaagtt 53 |||||||||||||||||||| Sbjct: 34406 gtcatttgctatgcaaagtt 34387
>ref|NM_001037696.1| Danio rerio WW domain containing transcription regulator 1 (wwtr1), mRNA Length = 1401 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 cacctccagcagcagcagca 275 |||||||||||||||||||| Sbjct: 684 cacctccagcagcagcagca 703
>gb|AC010051.9| Drosophila melanogaster 3L BAC RP98-3J2 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 184424 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 cacctccagcagcagcagca 275 |||||||||||||||||||| Sbjct: 32264 cacctccagcagcagcagca 32245
>gb|AC108877.2| Drosophila melanogaster 3L BAC RP98-17L24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163709 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 ccacctccagcagcagcagc 274 |||||||||||||||||||| Sbjct: 7057 ccacctccagcagcagcagc 7076
>gb|AY121663.1| Drosophila melanogaster RE10833 full insert cDNA Length = 2508 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 cacctccagcagcagcagca 275 |||||||||||||||||||| Sbjct: 753 cacctccagcagcagcagca 772
>gb|AC010011.5| Drosophila melanogaster 3L BAC RP98-17D14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167026 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 252 gcaccacctccagcagcagcagcaccac 279 |||||||| |||||||||||||||||| Sbjct: 145886 gcaccaccagcagcagcagcagcaccac 145913 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 252 gcaccacctccagcagcagcagcaccac 279 |||||||| |||||||||||||||||| Sbjct: 145865 gcaccaccagcagcagcagcagcaccac 145892
>gb|AC023751.3| Drosophila melanogaster 3L BAC RP98-31C17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 187437 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 ccacctccagcagcagcagc 274 |||||||||||||||||||| Sbjct: 90876 ccacctccagcagcagcagc 90895
>gb|AC023722.4| Drosophila melanogaster X BAC RP98-48O24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 191590 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 252 gcaccacctccagcagcagcagca 275 |||||||| ||||||||||||||| Sbjct: 7361 gcaccaccaccagcagcagcagca 7338
>gb|AC023699.4| Drosophila melanogaster X BAC RP98-11K20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177941 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 252 gcaccacctccagcagcagcagca 275 |||||||| ||||||||||||||| Sbjct: 111465 gcaccaccaccagcagcagcagca 111442
>dbj|AK094483.1| Homo sapiens cDNA FLJ37164 fis, clone BRACE2027221, weakly similar to VALYL-TRNA SYNTHETASE (EC 6.1.1.9) Length = 1997 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ccagcagcagcagcaccact 280 |||||||||||||||||||| Sbjct: 705 ccagcagcagcagcaccact 686
>gb|AC024947.5| Homo sapiens chromosome 01 clone RP11-200I10, complete sequence Length = 163033 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 cagcagcagcagcaccactg 281 |||||||||||||||||||| Sbjct: 131666 cagcagcagcagcaccactg 131647
>ref|NM_206441.1| Drosophila melanogaster proboscipedia CG31481-RB, transcript variant B (pb), mRNA Length = 3717 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 cacctccagcagcagcagcaccac 279 |||| ||||||||||||||||||| Sbjct: 2667 caccaccagcagcagcagcaccac 2690
>ref|NM_206440.1| Drosophila melanogaster proboscipedia CG31481-RC, transcript variant C (pb), mRNA Length = 3717 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 cacctccagcagcagcagcaccac 279 |||| ||||||||||||||||||| Sbjct: 2667 caccaccagcagcagcagcaccac 2690
>ref|NM_206439.1| Drosophila melanogaster proboscipedia CG31481-RD, transcript variant D (pb), mRNA Length = 3702 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 cacctccagcagcagcagcaccac 279 |||| ||||||||||||||||||| Sbjct: 2652 caccaccagcagcagcagcaccac 2675
>ref|NM_206407.1| Drosophila melanogaster schizo CG32434-RA, transcript variant A (siz), mRNA Length = 5284 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 cacctccagcagcagcagca 275 |||||||||||||||||||| Sbjct: 1177 cacctccagcagcagcagca 1196
>gb|AF161267.1| Toxoplasma gondii catalase gene, complete cds Length = 6957 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 ctgcagctgcactccctctt 329 |||||||||||||||||||| Sbjct: 6204 ctgcagctgcactccctctt 6185
>ref|NM_168881.1| Drosophila melanogaster schizo CG32434-RB, transcript variant B (siz), mRNA Length = 5124 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 cacctccagcagcagcagca 275 |||||||||||||||||||| Sbjct: 1017 cacctccagcagcagcagca 1036
>ref|NM_168102.1| Drosophila melanogaster Guanine nucleotide exchange factor GEF64C CG32239-RA (Gef64C), mRNA Length = 7283 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 ccacctccagcagcagcagc 274 |||||||||||||||||||| Sbjct: 4302 ccacctccagcagcagcagc 4321
>ref|NM_166643.1| Drosophila melanogaster CG3065-RC, transcript variant C (CG3065), mRNA Length = 1857 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 252 gcaccacctccagcagcagcagca 275 |||||||| ||||||||||||||| Sbjct: 1047 gcaccaccaccagcagcagcagca 1070
>ref|NM_166642.1| Drosophila melanogaster CG3065-RB, transcript variant B (CG3065), mRNA Length = 1868 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 252 gcaccacctccagcagcagcagca 275 |||||||| ||||||||||||||| Sbjct: 1058 gcaccaccaccagcagcagcagca 1081
>ref|NM_164627.1| Drosophila melanogaster quick-to-court CG14039-RC, transcript variant C (qtc), mRNA Length = 2183 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 cacctccagcagcagcagca 275 |||||||||||||||||||| Sbjct: 80 cacctccagcagcagcagca 99
>ref|NM_164626.1| Drosophila melanogaster quick-to-court CG14039-RD, transcript variant D (qtc), mRNA Length = 2270 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 cacctccagcagcagcagca 275 |||||||||||||||||||| Sbjct: 167 cacctccagcagcagcagca 186
>ref|NM_164625.1| Drosophila melanogaster quick-to-court CG14039-RB, transcript variant B (qtc), mRNA Length = 2353 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 cacctccagcagcagcagca 275 |||||||||||||||||||| Sbjct: 250 cacctccagcagcagcagca 269 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,332,583 Number of Sequences: 3902068 Number of extensions: 4332583 Number of successful extensions: 270248 Number of sequences better than 10.0: 335 Number of HSP's better than 10.0 without gapping: 340 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 266676 Number of HSP's gapped (non-prelim): 3546 length of query: 425 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 403 effective length of database: 17,147,199,772 effective search space: 6910321508116 effective search space used: 6910321508116 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)