Clone Name	rbaal19m19
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	emb|Z28347.1|HVPLASC1 H.vulgare (NK 1558) gene for plastocyanin	797	0.0
2	emb|Y00704.1|HVPCR Barley mRNA for plastocyanin precursor	797	0.0
3	dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...	353	3e-94
4	dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic D...	353	3e-94
5	dbj|AK070447.1| Oryza sativa (japonica cultivar-group) cDNA clon...	353	3e-94
6	dbj|AP005621.2| Oryza sativa (japonica cultivar-group) genomic D...	353	3e-94
7	gb|AF093636.1|AF093636 Oryza sativa plastocyanin precursor, mRNA...	353	3e-94
8	gb|AF009412.1|AF009412 Oryza sativa plastocyanin precursor, mRNA...	315	6e-83
9	gb|AY104253.1| Zea mays PCO133617 mRNA sequence	244	2e-61
10	gb|AY614612.1| Ulva pertusa plastocyanin precursor, mRNA, comple...	62	2e-06
11	gb|AF031545.1|AF031545 Fritillaria agrestis plastocyanin (ploc) ...	62	2e-06
12	ref|NM_106259.2| Arabidopsis thaliana copper ion binding / elect...	58	2e-05
13	gb|BT025525.1| Arabidopsis thaliana At1g76100 mRNA, complete cds	58	2e-05
14	emb|Z83321.1|ATZ83321 A.thaliana 16 kb chromosome 1 DNA fragment	58	2e-05
15	gb|BT021977.1| Arabidopsis thaliana At1g76100 mRNA, complete cds	58	2e-05
16	gb|AC009978.3|AC009978 Genomic sequence for Arabidopsis thaliana...	58	2e-05
17	emb|X02965.1|SPPCYA Silene pratensis mRNA for plastocyanin precu...	58	2e-05
18	gb|M20937.1|ATHPCG A.thaliana plastocyanin gene, complete cds	58	2e-05
19	emb|X04693.1|SOPCG Spinach gene for plastocyanin	52	0.001
20	gb|DQ226793.1| Boechera divaricarpa isolate SLW-B-C02 mRNA sequence	50	0.006
21	gb|J05524.1|CREAPCYN C.reinhardtii apoplastocyanin (PC6-2) mRNA,...	48	0.023
22	emb|Z50186.1|PNPCBMR P.nigra mRNA for plastocyanin b	46	0.092
23	gb|CP000110.1| Synechococcus sp. CC9605, complete genome	44	0.36
24	gb|CP000097.1| Synechococcus sp. CC9902, complete genome	44	0.36
25	gb|DQ122875.1| Chlamydomonas incerta chloroplast plastocyanin (p...	44	0.36
26	gb|AC119572.26| Ustilago hordei strain 4875-4 clone uhobac-5d9, ...	44	0.36
27	emb|AM118080.1| Ustilago hordei mating type region MAT-1, strain...	44	0.36
28	gb|L07282.1|CREPETE Chlamydomonas reinhardtii plastocyanin (petE...	44	0.36
29	dbj|AB026687.1| Physcomitrella patens mRNA for plastocyanin prec...	44	0.36
30	gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome	42	1.4
31	emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genom...	42	1.4
32	emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genom...	42	1.4
33	dbj|AB223673.1| Aspergillus oryzae cDNA, contig sequence: AoEST0513	42	1.4
34	dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111	42	1.4
35	gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple...	42	1.4
36	gb|AF260581.1|AF260581 Amycolatopsis mediterranei plasmid pHGF80...	42	1.4
37	dbj|AP004948.1| Lotus japonicus genomic DNA, chromosome , clone:...	42	1.4
38	gb|AC099884.12| Mus musculus chromosome 15, clone RP23-11F24, co...	40	5.7
39	gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome	40	5.7
40	gb|AY491539.1| Nicotiana tabacum voucher Et4-10 ERT10 (ERT10) mR...	40	5.7
41	gb|AC139350.3| Mus musculus BAC clone RP24-254D18 from chromosom...	40	5.7
42	gb|AC141437.4| Mus musculus BAC clone RP23-283O7 from chromosome...	40	5.7
43	ref|XM_960955.1| Plasmodium falciparum 3D7 DNA repair protein (r...	40	5.7
44	gb|AC143339.12| Medicago truncatula clone mth2-20g20, complete s...	40	5.7
45	gb|AC160629.6| Medicago truncatula clone mth2-24p23, complete se...	40	5.7
46	gb|AC147365.4| Medicago truncatula clone mth2-10f9, complete seq...	40	5.7
47	emb|Z99291.1|HS308I13 Human DNA sequence from clone RP1-308I13 o...	40	5.7
48	gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ...	40	5.7
49	gb|AC092982.3| Homo sapiens 3q BAC RP11-758I14 (Roswell Park Can...	40	5.7
50	gb|AC128655.8| Homo sapiens 3 BAC RP11-260O18 (Roswell Park Canc...	40	5.7
51	emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome	40	5.7
52	emb|CR382398.1| Plasmodium falciparum chromosome 6, complete seq...	40	5.7
53	gb|AC112800.6| Rattus norvegicus X BAC CH230-275F1 (Children's H...	40	5.7
54	emb|BX842584.1| Mycobacterium tuberculosis H37Rv complete genome...	40	5.7
55	emb|BX569693.1| Synechococcus sp. WH8102 complete genome; segmen...	40	5.7
56	emb|BX248347.1| Mycobacterium bovis subsp. bovis AF2122/97 compl...	40	5.7
57	emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete ...	40	5.7
58	emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; s...	40	5.7
59	emb|AL844607.4| Mouse DNA sequence from clone RP24-280G18 on chr...	40	5.7
60	emb|CR456624.7| Zebrafish DNA sequence from clone CH211-69E5 in ...	40	5.7
61	emb|BX470065.7| Zebrafish DNA sequence from clone DKEY-105H11 in...	40	5.7
62	gb|DQ450368.1| Uncultured bacterium clone X16 16S ribosomal RNA ...	40	5.7
63	gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome	40	5.7
64	gb|AC020689.8| Homo sapiens chromosome , clone RP11-440M23, comp...	40	5.7
65	emb|BX936465.15| Zebrafish DNA sequence from clone CH211-95J16 i...	40	5.7
66	gb|AC007594.5| Drosophila melanogaster, chromosome 3R, region 87...	40	5.7
67	gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome	40	5.7
68	gb|AC009741.5|AC009741 Drosophila melanogaster, chromosome 3R, r...	40	5.7
69	dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co...	40	5.7
70	gb|AF210249.1|AF210249 Streptomyces verticillus bleomycin biosyn...	40	5.7
71	dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome	40	5.7
72	dbj|AB006038.1| Cyprinus carpio cERK1 mRNA for extracellular sig...	40	5.7
73	emb|Z50185.1|PNPCAMR P.nigra mRNA for plastocyanin a	40	5.7
74	ref|XM_309970.2| Anopheles gambiae str. PEST ENSANGP00000015919 ...	40	5.7
75	gb|AF114235.1|AF114235 Scenedesmus obliquus plastocyanin (Pcy) g...	40	5.7
76	emb|CR925781.6| Zebrafish DNA sequence from clone DKEY-3B23 in l...	40	5.7
77	emb|BX927197.7| Zebrafish DNA sequence from clone DKEY-28F16 in ...	40	5.7
78	emb|AL135928.6| Human DNA sequence from clone RP4-534P7 on chrom...	40	5.7
79	gb|AE003695.2| Drosophila melanogaster chromosome 3R, section 33...	40	5.7
80	gb|AE003818.3| Drosophila melanogaster chromosome 2R, section 32...	40	5.7
81	gb|AC006422.1|AC006422 Drosophila melanogaster, chromosome 2R, r...	40	5.7
82	emb|BX901974.11| Zebrafish DNA sequence from clone DKEY-30F3 in ...	40	5.7
83	gb|AD000012.1|MSGY126 Mycobacterium tuberculosis sequence from c...	40	5.7
84	emb|AL844882.9| Mouse DNA sequence from clone RP23-360H15 on chr...	40	5.7
85	emb|AL772278.7| Mouse DNA sequence from clone RP23-416G5 on chro...	40	5.7
86	gb|AC138594.10| Mus musculus chromosome 7, clone RP24-283N22, co...	40	5.7
87	gb|M97702.1|DROGLUSTD Drosophila melanogaster glutathione S-tran...	40	5.7

---

>emb|Z28347.1|HVPLASC1 H.vulgare (NK 1558) gene for plastocyanin
          Length = 1884

 Score =  797 bits (402), Expect = 0.0
 Identities = 418/423 (98%), Gaps = 3/423 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaacatatacatacatatagcgtacaattaatcaatatgatgcatgcatgacgacacgt 60
            |||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||
Sbjct: 1528 aaaacatatacatacatatagcgtacaattaatcaatatgatgcatgca---cgacacgt 1472

                                                                        
Query: 61   ccaatttgagcgatcaatcgacccaaattggtagcttcattagttgacggtgacctttcc 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1471 ccaatttgagcgatcaatcgacccaaattggtagcttcattagttgacggtgacctttcc 1412

                                                                        
Query: 121  gaccatgccggccccagcgtggggctcgcagtagaagccgtaggtgccggggacggtgag 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1411 gaccatgccggccccagcgtggggctcgcagtagaagccgtaggtgccggggacggtgag 1352

                                                                        
Query: 181  ggtgacggagaaggtctcgccgggggcgttgaggtactcctcctgggagatcttggagac 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1351 ggtgacggagaaggtctcgccgggggcgttgaggtactcctcctgggagatcttggagac 1292

                                                                        
Query: 241  gtcgacgccggagggcacggcgtcctcgtcgaacaccacgttgtgcgggtacccggcgtt 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1291 gtcgacgccggagggcacggcgtcctcgtcgaacaccacgttgtgcgggtacccggcgtt 1232

                                                                        
Query: 301  gttcttgaaggtgatggtctcgccggccttgacgctgaagtcgttgggctcgaacaccan 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 1231 gttcttgaaggtgatggtctcgccggccttgacgctgaagtcgttgggctcgaacaccag 1172

                                                                        
Query: 361  cacgccgccgttggcacccaggagcacgtactgtgccatcgcggacccgcccagcagcat 420
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1171 cacgccgccgttggcacccaggagcacgtcctgtgccatcgcggacccgcccagcagcat 1112

               
Query: 421  ggc 423
            |||
Sbjct: 1111 ggc 1109

---

>emb|Y00704.1|HVPCR Barley mRNA for plastocyanin precursor
          Length = 662

 Score =  797 bits (402), Expect = 0.0
 Identities = 418/423 (98%), Gaps = 3/423 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaaacatatacatacatatagcgtacaattaatcaatatgatgcatgcatgacgacacgt 60
           |||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||
Sbjct: 614 aaaacatatacatacatatagcgtacaattaatcaatatgatgcatgca---cgacacgt 558

                                                                       
Query: 61  ccaatttgagcgatcaatcgacccaaattggtagcttcattagttgacggtgacctttcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ccaatttgagcgatcaatcgacccaaattggtagcttcattagttgacggtgacctttcc 498

                                                                       
Query: 121 gaccatgccggccccagcgtggggctcgcagtagaagccgtaggtgccggggacggtgag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gaccatgccggccccagcgtggggctcgcagtagaagccgtaggtgccggggacggtgag 438

                                                                       
Query: 181 ggtgacggagaaggtctcgccgggggcgttgaggtactcctcctgggagatcttggagac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ggtgacggagaaggtctcgccgggggcgttgaggtactcctcctgggagatcttggagac 378

                                                                       
Query: 241 gtcgacgccggagggcacggcgtcctcgtcgaacaccacgttgtgcgggtacccggcgtt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gtcgacgccggagggcacggcgtcctcgtcgaacaccacgttgtgcgggtacccggcgtt 318

                                                                       
Query: 301 gttcttgaaggtgatggtctcgccggccttgacgctgaagtcgttgggctcgaacaccan 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 317 gttcttgaaggtgatggtctcgccggccttgacgctgaagtcgttgggctcgaacaccag 258

                                                                       
Query: 361 cacgccgccgttggcacccaggagcacgtactgtgccatcgcggacccgcccagcagcat 420
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 257 cacgccgccgttggcacccaggagcacgtcctgtgccatcgcggacccgcccagcagcat 198

              
Query: 421 ggc 423
           |||
Sbjct: 197 ggc 195

---

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score =  353 bits (178), Expect = 3e-94
 Identities = 252/277 (90%)
 Strand = Plus / Plus

                                                                          
Query: 99     attagttgacggtgacctttccgaccatgccggccccagcgtggggctcgcagtagaagc 158
              ||||||||||||||||||| |||||||| || || || ||||| ||||||||||||||||
Sbjct: 148657 attagttgacggtgaccttgccgaccatcccagctccggcgtgcggctcgcagtagaagc 148716

                                                                          
Query: 159    cgtaggtgccggggacggtgagggtgacggagaaggtctcgccgggggcgttgaggtact 218
              |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 148717 cgtatgtgccggggacggtgagcgtgacggagaaggtctcgccgggggcgttgaggtact 148776

                                                                          
Query: 219    cctcctgggagatcttggagacgtcgacgccggagggcacggcgtcctcgtcgaacacca 278
              ||||||| || |||||||| ||||||||||||   || || |||||||||||||||||||
Sbjct: 148777 cctcctgcgatatcttggacacgtcgacgccgctcggaaccgcgtcctcgtcgaacacca 148836

                                                                          
Query: 279    cgttgtgcgggtacccggcgttgttcttgaaggtgatggtctcgccggccttgacgctga 338
              ||||||| ||| | ||||||||||||||||| |||||||||||||||| ||||||| |||
Sbjct: 148837 cgttgtgagggaagccggcgttgttcttgaacgtgatggtctcgccggacttgacggtga 148896

                                                   
Query: 339    agtcgttgggctcgaacaccancacgccgccgttggc 375
              ||||||| ||||||||||||| ||||||||| |||||
Sbjct: 148897 agtcgttcggctcgaacaccagcacgccgccattggc 148933

---

>dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0075G19
          Length = 163558

 Score =  353 bits (178), Expect = 3e-94
 Identities = 252/277 (90%)
 Strand = Plus / Plus

                                                                         
Query: 99    attagttgacggtgacctttccgaccatgccggccccagcgtggggctcgcagtagaagc 158
             ||||||||||||||||||| |||||||| || || || ||||| ||||||||||||||||
Sbjct: 13553 attagttgacggtgaccttgccgaccatcccagctccggcgtgcggctcgcagtagaagc 13612

                                                                         
Query: 159   cgtaggtgccggggacggtgagggtgacggagaaggtctcgccgggggcgttgaggtact 218
             |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 13613 cgtatgtgccggggacggtgagcgtgacggagaaggtctcgccgggggcgttgaggtact 13672

                                                                         
Query: 219   cctcctgggagatcttggagacgtcgacgccggagggcacggcgtcctcgtcgaacacca 278
             ||||||| || |||||||| ||||||||||||   || || |||||||||||||||||||
Sbjct: 13673 cctcctgcgatatcttggacacgtcgacgccgctcggaaccgcgtcctcgtcgaacacca 13732

                                                                         
Query: 279   cgttgtgcgggtacccggcgttgttcttgaaggtgatggtctcgccggccttgacgctga 338
             ||||||| ||| | ||||||||||||||||| |||||||||||||||| ||||||| |||
Sbjct: 13733 cgttgtgagggaagccggcgttgttcttgaacgtgatggtctcgccggacttgacggtga 13792

                                                  
Query: 339   agtcgttgggctcgaacaccancacgccgccgttggc 375
             ||||||| ||||||||||||| ||||||||| |||||
Sbjct: 13793 agtcgttcggctcgaacaccagcacgccgccattggc 13829

---

>dbj|AK070447.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049C22, full
           insert sequence
          Length = 703

 Score =  353 bits (178), Expect = 3e-94
 Identities = 252/277 (90%)
 Strand = Plus / Minus

                                                                       
Query: 99  attagttgacggtgacctttccgaccatgccggccccagcgtggggctcgcagtagaagc 158
           ||||||||||||||||||| |||||||| || || || ||||| ||||||||||||||||
Sbjct: 532 attagttgacggtgaccttgccgaccatcccagctccggcgtgcggctcgcagtagaagc 473

                                                                       
Query: 159 cgtaggtgccggggacggtgagggtgacggagaaggtctcgccgggggcgttgaggtact 218
           |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 472 cgtatgtgccggggacggtgagcgtgacggagaaggtctcgccgggggcgttgaggtact 413

                                                                       
Query: 219 cctcctgggagatcttggagacgtcgacgccggagggcacggcgtcctcgtcgaacacca 278
           ||||||| || |||||||| ||||||||||||   || || |||||||||||||||||||
Sbjct: 412 cctcctgcgatatcttggacacgtcgacgccgctcggaaccgcgtcctcgtcgaacacca 353

                                                                       
Query: 279 cgttgtgcgggtacccggcgttgttcttgaaggtgatggtctcgccggccttgacgctga 338
           ||||||| ||| | ||||||||||||||||| |||||||||||||||| ||||||| |||
Sbjct: 352 cgttgtgagggaagccggcgttgttcttgaacgtgatggtctcgccggacttgacggtga 293

                                                
Query: 339 agtcgttgggctcgaacaccancacgccgccgttggc 375
           ||||||| ||||||||||||| ||||||||| |||||
Sbjct: 292 agtcgttcggctcgaacaccagcacgccgccattggc 256

---

>dbj|AP005621.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0681G01, complete sequence
          Length = 184118

 Score =  353 bits (178), Expect = 3e-94
 Identities = 252/277 (90%)
 Strand = Plus / Minus

                                                                         
Query: 99    attagttgacggtgacctttccgaccatgccggccccagcgtggggctcgcagtagaagc 158
             ||||||||||||||||||| |||||||| || || || ||||| ||||||||||||||||
Sbjct: 71885 attagttgacggtgaccttgccgaccatcccagctccggcgtgcggctcgcagtagaagc 71826

                                                                         
Query: 159   cgtaggtgccggggacggtgagggtgacggagaaggtctcgccgggggcgttgaggtact 218
             |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 71825 cgtatgtgccggggacggtgagcgtgacggagaaggtctcgccgggggcgttgaggtact 71766

                                                                         
Query: 219   cctcctgggagatcttggagacgtcgacgccggagggcacggcgtcctcgtcgaacacca 278
             ||||||| || |||||||| ||||||||||||   || || |||||||||||||||||||
Sbjct: 71765 cctcctgcgatatcttggacacgtcgacgccgctcggaaccgcgtcctcgtcgaacacca 71706

                                                                         
Query: 279   cgttgtgcgggtacccggcgttgttcttgaaggtgatggtctcgccggccttgacgctga 338
             ||||||| ||| | ||||||||||||||||| |||||||||||||||| ||||||| |||
Sbjct: 71705 cgttgtgagggaagccggcgttgttcttgaacgtgatggtctcgccggacttgacggtga 71646

                                                  
Query: 339   agtcgttgggctcgaacaccancacgccgccgttggc 375
             ||||||| ||||||||||||| ||||||||| |||||
Sbjct: 71645 agtcgttcggctcgaacaccagcacgccgccattggc 71609

---

>gb|AF093636.1|AF093636 Oryza sativa plastocyanin precursor, mRNA, complete cds
          Length = 676

 Score =  353 bits (178), Expect = 3e-94
 Identities = 252/277 (90%)
 Strand = Plus / Minus

                                                                       
Query: 99  attagttgacggtgacctttccgaccatgccggccccagcgtggggctcgcagtagaagc 158
           ||||||||||||||||||| |||||||| || || || ||||| ||||||||||||||||
Sbjct: 514 attagttgacggtgaccttgccgaccatcccagctccggcgtgcggctcgcagtagaagc 455

                                                                       
Query: 159 cgtaggtgccggggacggtgagggtgacggagaaggtctcgccgggggcgttgaggtact 218
           |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 454 cgtatgtgccggggacggtgagcgtgacggagaaggtctcgccgggggcgttgaggtact 395

                                                                       
Query: 219 cctcctgggagatcttggagacgtcgacgccggagggcacggcgtcctcgtcgaacacca 278
           ||||||| || |||||||| ||||||||||||   || || |||||||||||||||||||
Sbjct: 394 cctcctgcgatatcttggacacgtcgacgccgctcggaaccgcgtcctcgtcgaacacca 335

                                                                       
Query: 279 cgttgtgcgggtacccggcgttgttcttgaaggtgatggtctcgccggccttgacgctga 338
           ||||||| ||| | ||||||||||||||||| |||||||||||||||| ||||||| |||
Sbjct: 334 cgttgtgagggaagccggcgttgttcttgaacgtgatggtctcgccggacttgacggtga 275

                                                
Query: 339 agtcgttgggctcgaacaccancacgccgccgttggc 375
           ||||||| ||||||||||||| ||||||||| |||||
Sbjct: 274 agtcgttcggctcgaacaccagcacgccgccattggc 238

---

>gb|AF009412.1|AF009412 Oryza sativa plastocyanin precursor, mRNA, complete cds
          Length = 745

 Score =  315 bits (159), Expect = 6e-83
 Identities = 247/277 (89%)
 Strand = Plus / Minus

                                                                       
Query: 99  attagttgacggtgacctttccgaccatgccggccccagcgtggggctcgcagtagaagc 158
           ||||||||||||||||||| |||||||| || || || ||||| |||||||||||||| |
Sbjct: 526 attagttgacggtgaccttgccgaccatcccagctccggcgtgcggctcgcagtagaanc 467

                                                                       
Query: 159 cgtaggtgccggggacggtgagggtgacggagaaggtctcgccgggggcgttgaggtact 218
           |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 466 cgtatgtgccggggacggtgagcgtgacggagaaggtctcgccgggggcgttgaggtact 407

                                                                       
Query: 219 cctcctgggagatcttggagacgtcgacgccggagggcacggcgtcctcgtcgaacacca 278
           ||||||| || || ||||| | || |||||||   || || ||||||| |||||||||||
Sbjct: 406 cctcctgcgatattttggacaagttgacgccgctcggaaccgcgtccttgtcgaacacca 347

                                                                       
Query: 279 cgttgtgcgggtacccggcgttgttcttgaaggtgatggtctcgccggccttgacgctga 338
           ||||||| ||| | ||||||||||||||||| |||||||||||||||| ||||||| |||
Sbjct: 346 cgttgtgagggaagccggcgttgttcttgaacgtgatggtctcgccggacttgacggtga 287

                                                
Query: 339 agtcgttgggctcgaacaccancacgccgccgttggc 375
           ||||||| ||||||||||||| ||||||||| |||||
Sbjct: 286 agtcgttcggctcgaacaccagcacgccgccattggc 250

---

>gb|AY104253.1| Zea mays PCO133617 mRNA sequence
          Length = 1001

 Score =  244 bits (123), Expect = 2e-61
 Identities = 228/263 (86%)
 Strand = Plus / Minus

                                                                       
Query: 92  tagcttcattagttgacggtgacctttccgaccatgccggccccagcgtggggctcgcag 151
           |||||| ||||||||||||||| ||| |||||||| ||||| ||    || |||||||||
Sbjct: 737 tagcttaattagttgacggtgatcttgccgaccattccggctccttgatgcggctcgcag 678

                                                                       
Query: 152 tagaagccgtaggtgccggggacggtgagggtgacggagaaggtctcgccgggggcgttg 211
           |||||||||||||| || || |||||||||||||||||| |||||||||| || ||||||
Sbjct: 677 tagaagccgtaggttcccggcacggtgagggtgacggagtaggtctcgcctggcgcgttg 618

                                                                       
Query: 212 aggtactcctcctgggagatcttggagacgtcgacgccggagggcacggcgtcctcgtcg 271
           |||||||||||||| |||||||||| | |||||||||||   |||||  |||| ||||||
Sbjct: 617 aggtactcctcctgcgagatcttggtggcgtcgacgccgctcggcacctcgtcttcgtcg 558

                                                                       
Query: 272 aacaccacgttgtgcgggtacccggcgttgttcttgaaggtgatggtctcgccggccttg 331
           || || |||||||||||| | ||||||||||||||||| |||||||| ||||||||||||
Sbjct: 557 aagacgacgttgtgcgggaagccggcgttgttcttgaatgtgatggtgtcgccggccttg 498

                                  
Query: 332 acgctgaagtcgttgggctcgaa 354
           ||| |||| | | ||||||||||
Sbjct: 497 acggtgaactggctgggctcgaa 475

---

>gb|AY614612.1| Ulva pertusa plastocyanin precursor, mRNA, complete cds; nuclear
           gene for plastid product
          Length = 787

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                          
Query: 124 catgccggccccagcgtggggctcgcagtagaagccgtaggtgccgg 170
           ||||||||| ||||| |||||||||||||||| |||||| |||||||
Sbjct: 436 catgccggcgccagcatggggctcgcagtagacgccgtatgtgccgg 390

---

>gb|AF031545.1|AF031545 Fritillaria agrestis plastocyanin (ploc) mRNA, complete cds
          Length = 720

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                          
Query: 263 tcctcgtcgaacaccacgttgtgcgggtacccggcgttgttcttgaa 309
           ||||| ||||||| ||| ||||||||| |||||||||||||||||||
Sbjct: 366 tcctcatcgaacaacacattgtgcgggaacccggcgttgttcttgaa 320

---

>ref|NM_106259.2| Arabidopsis thaliana copper ion binding / electron transporter
           AT1G76100 mRNA, complete cds
          Length = 771

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                            
Query: 261 cgtcctcgtcgaacaccacgttgtgcgggtacccggcgttgttcttgaa 309
           |||| ||||||||||||||||| || ||| |||| ||||||||||||||
Sbjct: 374 cgtcttcgtcgaacaccacgttatgtgggaaccctgcgttgttcttgaa 326

---

>gb|BT025525.1| Arabidopsis thaliana At1g76100 mRNA, complete cds
          Length = 516

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                            
Query: 261 cgtcctcgtcgaacaccacgttgtgcgggtacccggcgttgttcttgaa 309
           |||| ||||||||||||||||| || ||| |||| ||||||||||||||
Sbjct: 349 cgtcttcgtcgaacaccacgttatgtgggaaccctgcgttgttcttgaa 301

---

>emb|Z83321.1|ATZ83321 A.thaliana 16 kb chromosome 1 DNA fragment
          Length = 16202

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 261  cgtcctcgtcgaacaccacgttgtgcgggtacccggcgttgttcttgaa 309
            |||| ||||||||||||||||| || ||| |||| ||||||||||||||
Sbjct: 8735 cgtcttcgtcgaacaccacgttatgtgggaaccctgcgttgttcttgaa 8687

---

>gb|BT021977.1| Arabidopsis thaliana At1g76100 mRNA, complete cds
          Length = 746

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                            
Query: 261 cgtcctcgtcgaacaccacgttgtgcgggtacccggcgttgttcttgaa 309
           |||| ||||||||||||||||| || ||| |||| ||||||||||||||
Sbjct: 385 cgtcttcgtcgaacaccacgttatgtgggaaccctgcgttgttcttgaa 337

---

>gb|AC009978.3|AC009978 Genomic sequence for Arabidopsis thaliana BAC T23E18 from chromosome I,
             complete sequence
          Length = 97554

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                              
Query: 261   cgtcctcgtcgaacaccacgttgtgcgggtacccggcgttgttcttgaa 309
             |||| ||||||||||||||||| || ||| |||| ||||||||||||||
Sbjct: 10562 cgtcttcgtcgaacaccacgttatgtgggaaccctgcgttgttcttgaa 10610

---

>emb|X02965.1|SPPCYA Silene pratensis mRNA for plastocyanin precursor
          Length = 773

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                
Query: 263 tcctcgtcgaacaccacgttgtgcgggtacccggcgttgttcttgaaggtgat 315
           ||||||||||| || || ||||| ||| |||| ||||||||||||||||||||
Sbjct: 402 tcctcgtcgaagacgacattgtgtgggaacccagcgttgttcttgaaggtgat 350

---

>gb|M20937.1|ATHPCG A.thaliana plastocyanin gene, complete cds
          Length = 1447

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 261  cgtcctcgtcgaacaccacgttgtgcgggtacccggcgttgttcttgaa 309
            |||| ||||||||||||||||| || ||| |||| ||||||||||||||
Sbjct: 1005 cgtcttcgtcgaacaccacgttatgtgggaaccctgcgttgttcttgaa 957

---

>emb|X04693.1|SOPCG Spinach gene for plastocyanin
          Length = 1000

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                       
Query: 240 cgtcgacgccggagggcacggcgtcctcgtcgaacaccacgttgtgcgggtacccggcgt 299
           ||||||| |||||||| |   |||||||||| ||||| |||||||| ||| | ||||| |
Sbjct: 611 cgtcgacaccggagggaatctcgtcctcgtcaaacactacgttgtgggggaatccggcat 552

                     
Query: 300 tgttcttgaa 309
           ||||||||||
Sbjct: 551 tgttcttgaa 542

---

>gb|DQ226793.1| Boechera divaricarpa isolate SLW-B-C02 mRNA sequence
          Length = 701

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 261 cgtcctcgtcgaacaccacgttgtgcgggtacccggcgttgttcttgaa 309
           ||||||| |||||||| |||||||| ||| |||| || |||||||||||
Sbjct: 391 cgtcctcatcgaacacaacgttgtgtgggaacccagcattgttcttgaa 343

---

>gb|J05524.1|CREAPCYN C.reinhardtii apoplastocyanin (PC6-2) mRNA, complete cds
          Length = 577

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 245 acgccggagggcacggcgtcctcgtcgaacaccacgttgtgcgggtacccggcgttgttc 304
           ||||||||||| | ||| ||||||||||| || | |||||| ||| | || |||||||||
Sbjct: 314 acgccggaggggatggcatcctcgtcgaagacgatgttgtgggggaagccagcgttgttc 255

                                       
Query: 305 ttgaaggtgatggtctcgccggccttga 332
             |||| | | ||||||||||| |||||
Sbjct: 254 acgaagttcacggtctcgccggacttga 227



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 79/98 (80%)
 Strand = Plus / Minus

                                                                       
Query: 119 ccgaccatgccggccccagcgtggggctcgcagtagaagccgtaggtgccggggacggtg 178
           ||||||||||| || ||   |||||||||||||||| |||||||   |||||   |||| 
Sbjct: 440 ccgaccatgccagcgccctggtggggctcgcagtagtagccgtactcgccggcagcggtc 381

                                                 
Query: 179 agggtgacggagaaggtctcgccgggggcgttgaggta 216
           ||  | || ||| ||||||||||||||||||| |||||
Sbjct: 380 agcttcaccgagtaggtctcgccgggggcgttcaggta 343

---

>emb|Z50186.1|PNPCBMR P.nigra mRNA for plastocyanin b
          Length = 699

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 260 gcgtcctcgtcgaacaccacgttgtgcgggtacccggcgttgttcttgaag 310
           |||||||||||||| |  ||||| || ||| ||||||| ||||||||||||
Sbjct: 372 gcgtcctcgtcgaagagaacgttatgtgggaacccggcattgttcttgaag 322

---

>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                
Query: 119    ccgaccatgccggccccagcgtggggctcgcagtagaagccgtaggtgcc 168
              ||||||||||| || ||   |||||||||||||||| || ||||||||||
Sbjct: 962935 ccgaccatgccagcaccgcggtggggctcgcagtagtagtcgtaggtgcc 962984

---

>gb|CP000097.1| Synechococcus sp. CC9902, complete genome
          Length = 2234828

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                        
Query: 113    acctttccgaccatgccggccccagcgtggggctcgcagtag 154
              ||||| || ||||||||||| |||  ||||||||||||||||
Sbjct: 903742 accttgccaaccatgccggcaccacggtggggctcgcagtag 903783

---

>gb|DQ122875.1| Chlamydomonas incerta chloroplast plastocyanin (petE) mRNA,
           complete cds; nuclear gene for chloroplast product
          Length = 620

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 64/78 (82%)
 Strand = Plus / Minus

                                                                       
Query: 139 gtggggctcgcagtagaagccgtaggtgccggggacggtgagggtgacggagaaggtctc 198
           |||||||||||||||| |||||||   ||||| |  ||| ||  |||  ||| |||||||
Sbjct: 441 gtggggctcgcagtagtagccgtactcgccggcggtggtcagcttgagcgagtaggtctc 382

                             
Query: 199 gccgggggcgttgaggta 216
           |||||||||||| |||||
Sbjct: 381 gccgggggcgttcaggta 364



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 73/90 (81%)
 Strand = Plus / Minus

                                                                       
Query: 245 acgccggagggcacggcgtcctcgtcgaacaccacgttgtgcgggtacccggcgttgttc 304
           ||||| ||||| | ||| ||||| ||||| || | |||||| ||| | || |||||||||
Sbjct: 335 acgcccgaggggatggcatcctcatcgaagacgatgttgtgggggaagccagcgttgttc 276

                                         
Query: 305 ttgaaggtgatggtctcgccggccttgacg 334
             |||| | ||||||||||||| |||||||
Sbjct: 275 acgaagttaatggtctcgccggacttgacg 246

---

>gb|AC119572.26| Ustilago hordei strain 4875-4 clone uhobac-5d9, complete sequence
          Length = 152059

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 305    ttgaaggtgatggtctcgccgg 326
              ||||||||||||||||||||||
Sbjct: 108234 ttgaaggtgatggtctcgccgg 108213

---

>emb|AM118080.1| Ustilago hordei mating type region MAT-1, strain 364
          Length = 526707

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 305    ttgaaggtgatggtctcgccgg 326
              ||||||||||||||||||||||
Sbjct: 478082 ttgaaggtgatggtctcgccgg 478061

---

>gb|L07282.1|CREPETE Chlamydomonas reinhardtii plastocyanin (petE) gene, complete cds
          Length = 3380

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 64/78 (82%)
 Strand = Plus / Minus

                                                                        
Query: 139  gtggggctcgcagtagaagccgtaggtgccggggacggtgagggtgacggagaaggtctc 198
            |||||||||||||||| |||||||   |||||   |||| ||  | || ||| |||||||
Sbjct: 2666 gtggggctcgcagtagtagccgtactcgccggcagcggtcagcttcaccgagtaggtctc 2607

                              
Query: 199  gccgggggcgttgaggta 216
            |||||||||||| |||||
Sbjct: 2606 gccgggggcgttcaggta 2589

---

>dbj|AB026687.1| Physcomitrella patens mRNA for plastocyanin precursor, complete cds
          Length = 816

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 143 ggctcgcagtagaagccgtaggtgccgggg 172
           ||||||||||||||  ||||||||||||||
Sbjct: 533 ggctcgcagtagaactcgtaggtgccgggg 504

---

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 300     tgttcttgaaggtgatggtct 320
               |||||||||||||||||||||
Sbjct: 1887141 tgttcttgaaggtgatggtct 1887121

---

>emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genome; segment 13/16
          Length = 349746

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 301    gttcttgaaggtgatggtctcgccg 325
              |||||||||||||||||||| ||||
Sbjct: 246816 gttcttgaaggtgatggtcttgccg 246840

---

>emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genome; segment 3/16
          Length = 349260

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 258  cggcgtcctcgtcgaacacca 278
            |||||||||||||||||||||
Sbjct: 9780 cggcgtcctcgtcgaacacca 9760

---

>dbj|AB223673.1| Aspergillus oryzae cDNA, contig sequence: AoEST0513
          Length = 679

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 323 ccggccttgacgctgaagtcgttgg 347
           |||||||||||| ||||||||||||
Sbjct: 233 ccggccttgacggtgaagtcgttgg 209

---

>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111
          Length = 2356219

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 323     ccggccttgacgctgaagtcgttgg 347
               |||||||||||| ||||||||||||
Sbjct: 1916240 ccggccttgacggtgaagtcgttgg 1916264

---

>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 314     atggtctcgccggccttgacg 334
               |||||||||||||||||||||
Sbjct: 1713808 atggtctcgccggccttgacg 1713828

---

>gb|AF260581.1|AF260581 Amycolatopsis mediterranei plasmid pHGF8002 tripeptidyl
           aminopeptidase gene, partial cds;
           3-Deoxy-D-arabino-heptulosonate 7-phosphate synthase
           gene, complete cds; and 2,5 dichloro-2,5
           cyclohexadiene-1,4 diol dehydrogenase gene, partial cds
          Length = 2049

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 240 cgtcgacgccggagggcacggcgtc 264
           |||||||||||| ||||||||||||
Sbjct: 158 cgtcgacgccggcgggcacggcgtc 182

---

>dbj|AP004948.1| Lotus japonicus genomic DNA, chromosome , clone:LjT35I07, TM0121b,
             complete sequence
          Length = 56086

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                  
Query: 263   tcctcgtcgaacaccacgttgtgcgggtacccggcgttgttcttgaaggtgat 315
             ||||||||||| || |||||||| ||| | || || ||||||||||| |||||
Sbjct: 47362 tcctcgtcgaagacaacgttgtgagggaaaccagcattgttcttgaacgtgat 47310

---

>gb|AC099884.12| Mus musculus chromosome 15, clone RP23-11F24, complete sequence
          Length = 265797

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 4     acatatacatacatatagcgtaca 27
             ||||||||||||||||| ||||||
Sbjct: 81949 acatatacatacatatatcgtaca 81926

---

>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 251     gagggcacggcgtcctcgtcgaac 274
               ||||||||||||||||||| ||||
Sbjct: 4219645 gagggcacggcgtcctcgttgaac 4219622

---

>gb|AY491539.1| Nicotiana tabacum voucher Et4-10 ERT10 (ERT10) mRNA, partial cds
          Length = 457

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 278 acgttgtgcgggtacccggcgttgttcttgaa 309
           |||||||| ||| ||||||| |||||||||||
Sbjct: 277 acgttgtgggggaacccggcattgttcttgaa 246

---

>gb|AC139350.3| Mus musculus BAC clone RP24-254D18 from chromosome 15, complete
             sequence
          Length = 161300

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     aaaacatatacatacatata 20
             ||||||||||||||||||||
Sbjct: 40793 aaaacatatacatacatata 40812

---

>gb|AC141437.4| Mus musculus BAC clone RP23-283O7 from chromosome 19, complete sequence
          Length = 134644

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 217   ctcctcctgggagatcttgg 236
             ||||||||||||||||||||
Sbjct: 74230 ctcctcctgggagatcttgg 74211

---

>ref|XM_960955.1| Plasmodium falciparum 3D7 DNA repair protein (rad50) partial mRNA
          Length = 6711

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    aaaacatatacatacatata 20
            ||||||||||||||||||||
Sbjct: 3390 aaaacatatacatacatata 3409

---

>gb|AC143339.12| Medicago truncatula clone mth2-20g20, complete sequence
          Length = 99993

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     aaaacatatacatacatata 20
             ||||||||||||||||||||
Sbjct: 97038 aaaacatatacatacatata 97019

---

>gb|AC160629.6| Medicago truncatula clone mth2-24p23, complete sequence
          Length = 64145

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     aaaacatatacatacatata 20
             ||||||||||||||||||||
Sbjct: 15016 aaaacatatacatacatata 14997

---

>gb|AC147365.4| Medicago truncatula clone mth2-10f9, complete sequence
          Length = 89850

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     aaaacatatacatacatata 20
             ||||||||||||||||||||
Sbjct: 64642 aaaacatatacatacatata 64661

---

>emb|Z99291.1|HS308I13 Human DNA sequence from clone RP1-308I13 on chromosome 1p35-36.3
             Contains part of a novel gene, complete sequence
          Length = 96608

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    aattaatcaatatgatgcat 46
             ||||||||||||||||||||
Sbjct: 33672 aattaatcaatatgatgcat 33691

---

>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 312     tgatggtctcgccggccttg 331
               ||||||||||||||||||||
Sbjct: 2396531 tgatggtctcgccggccttg 2396512

---

>gb|AC092982.3| Homo sapiens 3q BAC RP11-758I14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 189219

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     aaaacatatacatacatata 20
             ||||||||||||||||||||
Sbjct: 87671 aaaacatatacatacatata 87652

---

>gb|AC128655.8| Homo sapiens 3 BAC RP11-260O18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 88017

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     aaaacatatacatacatata 20
             ||||||||||||||||||||
Sbjct: 15124 aaaacatatacatacatata 15105

---

>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome
          Length = 3523383

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 293     ccggcgttgttcttgaaggtgatg 316
               ||||||||||| ||||||||||||
Sbjct: 1002199 ccggcgttgttgttgaaggtgatg 1002222

---

>emb|CR382398.1| Plasmodium falciparum chromosome 6, complete sequence; segment 1/5
          Length = 349418

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      aaaacatatacatacatata 20
              ||||||||||||||||||||
Sbjct: 241129 aaaacatatacatacatata 241110

---

>gb|AC112800.6| Rattus norvegicus X BAC CH230-275F1 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 147560

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 4     acatatacatacatatagcgtacaatta 31
             ||||||||||||||||| | ||||||||
Sbjct: 13447 acatatacatacatataacatacaatta 13474

---

>emb|BX842584.1| Mycobacterium tuberculosis H37Rv complete genome; segment 13/13
          Length = 244800

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 251   gagggcacggcgtcctcgtcgaac 274
             ||||||||||||||||||| ||||
Sbjct: 60600 gagggcacggcgtcctcgttgaac 60577

---

>emb|BX569693.1| Synechococcus sp. WH8102 complete genome; segment 5/7
          Length = 349213

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 139   gtggggctcgcagtagaagccgtaggtgccgg 170
             |||||||||||||||| || || |||||||||
Sbjct: 60026 gtggggctcgcagtagtagtcgaaggtgccgg 59995

---

>emb|BX248347.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
             14/14
          Length = 278492

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 251   gagggcacggcgtcctcgtcgaac 274
             ||||||||||||||||||| ||||
Sbjct: 96627 gagggcacggcgtcctcgttgaac 96604

---

>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29
          Length = 310550

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 165    tgccggggacggtgagggtgacgg 188
              ||||||||||||||| ||||||||
Sbjct: 231576 tgccggggacggtgacggtgacgg 231553

---

>emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; segment 1/2
          Length = 178000

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 190   gaaggtctcgccgggggcgt 209
             ||||||||||||||||||||
Sbjct: 76984 gaaggtctcgccgggggcgt 76965

---

>emb|AL844607.4| Mouse DNA sequence from clone RP24-280G18 on chromosome 4, complete
            sequence
          Length = 160298

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 299  ttgttcttgaaggtgatggt 318
            ||||||||||||||||||||
Sbjct: 5632 ttgttcttgaaggtgatggt 5651

---

>emb|CR456624.7| Zebrafish DNA sequence from clone CH211-69E5 in linkage group 13,
             complete sequence
          Length = 172195

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     acatatacatacatatagcg 23
             ||||||||||||||||||||
Sbjct: 90561 acatatacatacatatagcg 90542

---

>emb|BX470065.7| Zebrafish DNA sequence from clone DKEY-105H11 in linkage group 24,
              complete sequence
          Length = 198444

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      aaaacatatacatacatata 20
              ||||||||||||||||||||
Sbjct: 142838 aaaacatatacatacatata 142819

---

>gb|DQ450368.1| Uncultured bacterium clone X16 16S ribosomal RNA gene, partial
           sequence
          Length = 361

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 258 cggcgtcctcgtcgaacacc 277
           ||||||||||||||||||||
Sbjct: 86  cggcgtcctcgtcgaacacc 67

---

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 302     ttcttgaaggtgatggtctcgccg 325
               ||||||||||||||||||| ||||
Sbjct: 1631031 ttcttgaaggtgatggtcttgccg 1631008

---

>gb|AC020689.8| Homo sapiens chromosome , clone RP11-440M23, complete sequence
          Length = 214702

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     aaaacatatacatacatata 20
             ||||||||||||||||||||
Sbjct: 80590 aaaacatatacatacatata 80609

---

>emb|BX936465.15| Zebrafish DNA sequence from clone CH211-95J16 in linkage group 18,
            complete sequence
          Length = 116706

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    aaaacatatacatacatata 20
            ||||||||||||||||||||
Sbjct: 4696 aaaacatatacatacatata 4677

---

>gb|AC007594.5| Drosophila melanogaster, chromosome 3R, region 87B-87C, BAC clone
             BACR28I14, complete sequence
          Length = 161601

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     aaaacatatacatacatata 20
             ||||||||||||||||||||
Sbjct: 14859 aaaacatatacatacatata 14878

---

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 301     gttcttgaaggtgatggtct 320
               ||||||||||||||||||||
Sbjct: 4353248 gttcttgaaggtgatggtct 4353267

---

>gb|AC009741.5|AC009741 Drosophila melanogaster, chromosome 3R, region 87B-87B, BAC clone
              BACR44K17, complete sequence
          Length = 166863

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      aaaacatatacatacatata 20
              ||||||||||||||||||||
Sbjct: 137822 aaaacatatacatacatata 137841

---

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 340    gtcgttgggctcgaacacca 359
              ||||||||||||||||||||
Sbjct: 454478 gtcgttgggctcgaacacca 454459

---

>gb|AF210249.1|AF210249 Streptomyces verticillus bleomycin biosynthetic gene cluster, complete
             cds
          Length = 77457

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 258   cggcgtcctcgtcgaacacc 277
             ||||||||||||||||||||
Sbjct: 55212 cggcgtcctcgtcgaacacc 55231

---

>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome
          Length = 1669695

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 361     cacgccgccgttggcaccca 380
               ||||||||||||||||||||
Sbjct: 1090584 cacgccgccgttggcaccca 1090565

---

>dbj|AB006038.1| Cyprinus carpio cERK1 mRNA for extracellular signal regulated protein
            kinase 1, complete cds
          Length = 1539

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    aaaacatatacatacatata 20
            ||||||||||||||||||||
Sbjct: 1514 aaaacatatacatacatata 1533

---

>emb|Z50185.1|PNPCAMR P.nigra mRNA for plastocyanin a
          Length = 721

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                           
Query: 263 tcctcgtcgaacaccacgttgtgcgggtacccggcgttgttcttgaag 310
           ||||||||||| || | |||||| ||| | ||||| ||||||||||||
Sbjct: 381 tcctcgtcgaagacaatgttgtgtgggaatccggcattgttcttgaag 334

---

>ref|XM_309970.2| Anopheles gambiae str. PEST ENSANGP00000015919 (ENSANGG00000013430),
            partial mRNA
          Length = 1287

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 390  actgtgccatcgcggacccg 409
            ||||||||||||||||||||
Sbjct: 1235 actgtgccatcgcggacccg 1254

---

>gb|AF114235.1|AF114235 Scenedesmus obliquus plastocyanin (Pcy) gene, Pcy-1 allele, complete
            cds
          Length = 3736

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 111  tgacctttccgaccatgccggccccagcgtggggctcgca 150
            ||||||| |||||||||||||| ||   ||||||||||||
Sbjct: 3161 tgaccttgccgaccatgccggcgccctggtggggctcgca 3122

---

>emb|CR925781.6| Zebrafish DNA sequence from clone DKEY-3B23 in linkage group 10,
             complete sequence
          Length = 202134

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    aattaatcaatatgatgcat 46
             ||||||||||||||||||||
Sbjct: 88416 aattaatcaatatgatgcat 88397

---

>emb|BX927197.7| Zebrafish DNA sequence from clone DKEY-28F16 in linkage group 18,
            complete sequence
          Length = 70511

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    aaaacatatacatacatata 20
            ||||||||||||||||||||
Sbjct: 3637 aaaacatatacatacatata 3618

---

>emb|AL135928.6| Human DNA sequence from clone RP4-534P7 on chromosome 1 Contains the 5'
             end of a gene for a beta
             1,3-N-acetylgalactosaminyltransferase-II (MGC39558)
             protein and a mitochondrial cytochrome b (MTCYB) pocessed
             pseudogene, complete sequence
          Length = 82939

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     aaaacatatacatacatata 20
             ||||||||||||||||||||
Sbjct: 73003 aaaacatatacatacatata 73022

---

>gb|AE003695.2| Drosophila melanogaster chromosome 3R, section 33 of 118 of the complete
              sequence
          Length = 225655

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      aaaacatatacatacatata 20
              ||||||||||||||||||||
Sbjct: 169117 aaaacatatacatacatata 169136

---

>gb|AE003818.3| Drosophila melanogaster chromosome 2R, section 32 of 73 of the complete
             sequence
          Length = 291923

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     aaacatatacatacatatag 21
             ||||||||||||||||||||
Sbjct: 56101 aaacatatacatacatatag 56082

---

>gb|AC006422.1|AC006422 Drosophila melanogaster, chromosome 2R, region 50A2-50A3, P1 clones
             DS08976 and DS01149, complete sequence
          Length = 129605

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     aaacatatacatacatatag 21
             ||||||||||||||||||||
Sbjct: 96957 aaacatatacatacatatag 96938

---

>emb|BX901974.11| Zebrafish DNA sequence from clone DKEY-30F3 in linkage group 3, complete
              sequence
          Length = 192650

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      aaaacatatacatacatata 20
              ||||||||||||||||||||
Sbjct: 123034 aaaacatatacatacatata 123053

---

>gb|AD000012.1|MSGY126 Mycobacterium tuberculosis sequence from clone y126
          Length = 37164

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 251   gagggcacggcgtcctcgtcgaac 274
             ||||||||||||||||||| ||||
Sbjct: 13981 gagggcacggcgtcctcgttgaac 13958

---

>emb|AL844882.9| Mouse DNA sequence from clone RP23-360H15 on chromosome 2, complete
             sequence
          Length = 167978

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     aaaacatatacatacatata 20
             ||||||||||||||||||||
Sbjct: 72130 aaaacatatacatacatata 72111

---

>emb|AL772278.7| Mouse DNA sequence from clone RP23-416G5 on chromosome 4, complete
             sequence
          Length = 199565

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     aaaacatatacatacatata 20
             ||||||||||||||||||||
Sbjct: 21629 aaaacatatacatacatata 21610

---

>gb|AC138594.10| Mus musculus chromosome 7, clone RP24-283N22, complete sequence
          Length = 167184

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     aaaacatatacatacatata 20
             ||||||||||||||||||||
Sbjct: 99139 aaaacatatacatacatata 99158

---

>gb|M97702.1|DROGLUSTD Drosophila melanogaster glutathione S-transferase gene
          Length = 14707

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    aaaacatatacatacatata 20
            ||||||||||||||||||||
Sbjct: 8859 aaaacatatacatacatata 8840


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,988,573
Number of Sequences: 3902068
Number of extensions: 2988573
Number of successful extensions: 99104
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98240
Number of HSP's gapped (non-prelim): 860
length of query: 423
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 401
effective length of database: 17,147,199,772
effective search space: 6876027108572
effective search space used: 6876027108572
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---