ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal19m17 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB219969.1| Triticum aestivum WAP2 mRNA for aspartic proteinase, complete cds Length = 1560 Score = 686 bits (346), Expect = 0.0 Identities = 391/406 (96%) Strand = Plus / Minus Query: 304 tcacagtgctctcgactcctcaagccgattctgcgaacccgattctgtccttgccgaagt 363 ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 1538 tcacagtgctctcgactcctcaagccgattccgcaaacccgattctgtccttgccgaagt 1479 Query: 364 cgaacacggtgtggtaaccgcccatgaagacatccccgagaatccagagaggaccgcgtg 423 ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1478 cgaacacggtgtggtaagcgcccatgaagacatccccaagaatccagagaggaccacgtg 1419 Query: 424 ggggcggtatgtcgaatgccatgaacccactgatgcagacggtctgccctgattgctcca 483 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1418 ggggcggtatgtcgaatgccatgaacccactgatgcagacggtttgccctgattgctcca 1359 Query: 484 gtttcacaatgtactgctctggtgttagcacgaaagtcttgtttgctatggcgaaagcaa 543 ||||||||| ||||||||||||||||||||||||||||||| |||| |||| |||||||| Sbjct: 1358 gtttcacaacgtactgctctggtgttagcacgaaagtcttgcttgcgatggtgaaagcaa 1299 Query: 544 gatttggcatctttgacatctcatggcagctgactgttgactctccgttggggcttggta 603 |||| ||||||||||||||||||||||||||||||||||||||||| || ||||| |||| Sbjct: 1298 gattcggcatctttgacatctcatggcagctgactgttgactctccatttgggctcggta 1239 Query: 604 gacgctcacacagctggttagcatattgcaatatcagctcctttgttttgttctcacgga 663 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1238 gacgctcacacagctggttagcatattgcaatatcagctcctttgttttgttttcacgga 1179 Query: 664 gctggttctctatccacacaacagccatctcacaggctgtgcacat 709 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1178 gctggttctctatccacacaacagccatctcacaggctgtgcacat 1133
>ref|XM_475576.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1491 Score = 361 bits (182), Expect = 2e-96 Identities = 317/362 (87%) Strand = Plus / Minus Query: 336 gcgaacccgattctgtccttgccgaagtcgaacacggtgtggtaaccgcccatgaagaca 395 ||||||||||| ||||| |||||||||||||| || || || ||| | |||||||||||| Sbjct: 1478 gcgaacccgatcctgtctttgccgaagtcgaaaaccgtatgataagcacccatgaagaca 1419 Query: 396 tccccgagaatccagagaggaccgcgtgggggcggtatgtcgaatgccatgaacccactg 455 || || |||||||| |||||||||||||| || ||||||||||| ||||||||||| ||| Sbjct: 1418 tctccaagaatccaaagaggaccgcgtggtggaggtatgtcgaacgccatgaacccgctg 1359 Query: 456 atgcagacggtctgccctgattgctccagtttcacaatgtactgctctggtgttagcacg 515 ||||||||||| |||||| ||||||||||||||| ||||||||||||||||| || | Sbjct: 1358 atgcagacggtttgccctccttgctccagtttcacgatgtactgctctggtgtaagaata 1299 Query: 516 aaagtcttgtttgctatggcgaaagcaagatttggcatctttgacatctcatggcagctg 575 || ||||||||||| |||| ||| |||||||| |||||||| || || | |||||||||| Sbjct: 1298 aatgtcttgtttgcaatggtgaatgcaagattaggcatcttcgagatttgatggcagctg 1239 Query: 576 actgttgactctccgttggggcttggtagacgctcacacagctggttagcatattgcaat 635 || ||||| ||||| ||||||||||||||||||||||| | ||| |||||||| | |||| Sbjct: 1238 acagttgattctccattggggcttggtagacgctcacataactgattagcataattcaat 1179 Query: 636 atcagctcctttgttttgttctcacggagctggttctctatccacacaacagccatctca 695 ||||||||||| ||||| || || || ||||||||||||||||||||||||||||||||| Sbjct: 1178 atcagctccttcgttttattttcgcgtagctggttctctatccacacaacagccatctca 1119 Query: 696 ca 697 || Sbjct: 1118 ca 1117
>dbj|AK065206.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F13, full insert sequence Length = 1900 Score = 361 bits (182), Expect = 2e-96 Identities = 317/362 (87%) Strand = Plus / Minus Query: 336 gcgaacccgattctgtccttgccgaagtcgaacacggtgtggtaaccgcccatgaagaca 395 ||||||||||| ||||| |||||||||||||| || || || ||| | |||||||||||| Sbjct: 1630 gcgaacccgatcctgtctttgccgaagtcgaaaaccgtatgataagcacccatgaagaca 1571 Query: 396 tccccgagaatccagagaggaccgcgtgggggcggtatgtcgaatgccatgaacccactg 455 || || |||||||| |||||||||||||| || ||||||||||| ||||||||||| ||| Sbjct: 1570 tctccaagaatccaaagaggaccgcgtggtggaggtatgtcgaacgccatgaacccgctg 1511 Query: 456 atgcagacggtctgccctgattgctccagtttcacaatgtactgctctggtgttagcacg 515 ||||||||||| |||||| ||||||||||||||| ||||||||||||||||| || | Sbjct: 1510 atgcagacggtttgccctccttgctccagtttcacgatgtactgctctggtgtaagaata 1451 Query: 516 aaagtcttgtttgctatggcgaaagcaagatttggcatctttgacatctcatggcagctg 575 || ||||||||||| |||| ||| |||||||| |||||||| || || | |||||||||| Sbjct: 1450 aatgtcttgtttgcaatggtgaatgcaagattaggcatcttcgagatttgatggcagctg 1391 Query: 576 actgttgactctccgttggggcttggtagacgctcacacagctggttagcatattgcaat 635 || ||||| ||||| ||||||||||||||||||||||| | ||| |||||||| | |||| Sbjct: 1390 acagttgattctccattggggcttggtagacgctcacataactgattagcataattcaat 1331 Query: 636 atcagctcctttgttttgttctcacggagctggttctctatccacacaacagccatctca 695 ||||||||||| ||||| || || || ||||||||||||||||||||||||||||||||| Sbjct: 1330 atcagctccttcgttttattttcgcgtagctggttctctatccacacaacagccatctca 1271 Query: 696 ca 697 || Sbjct: 1270 ca 1269
>dbj|D12777.1|RICASPPRO Oryza sativa (japonica cultivar-group) mRNA for aspartic proteinase, complete cds Length = 1774 Score = 361 bits (182), Expect = 2e-96 Identities = 317/362 (87%) Strand = Plus / Minus Query: 336 gcgaacccgattctgtccttgccgaagtcgaacacggtgtggtaaccgcccatgaagaca 395 ||||||||||| ||||| |||||||||||||| || || || ||| | |||||||||||| Sbjct: 1559 gcgaacccgatcctgtctttgccgaagtcgaaaaccgtatgataagcacccatgaagaca 1500 Query: 396 tccccgagaatccagagaggaccgcgtgggggcggtatgtcgaatgccatgaacccactg 455 || || |||||||| |||||||||||||| || ||||||||||| ||||||||||| ||| Sbjct: 1499 tctccaagaatccaaagaggaccgcgtggtggaggtatgtcgaacgccatgaacccgctg 1440 Query: 456 atgcagacggtctgccctgattgctccagtttcacaatgtactgctctggtgttagcacg 515 ||||||||||| |||||| ||||||||||||||| ||||||||||||||||| || | Sbjct: 1439 atgcagacggtttgccctccttgctccagtttcacgatgtactgctctggtgtaagaata 1380 Query: 516 aaagtcttgtttgctatggcgaaagcaagatttggcatctttgacatctcatggcagctg 575 || ||||||||||| |||| ||| |||||||| |||||||| || || | |||||||||| Sbjct: 1379 aatgtcttgtttgcaatggtgaatgcaagattaggcatcttcgagatttgatggcagctg 1320 Query: 576 actgttgactctccgttggggcttggtagacgctcacacagctggttagcatattgcaat 635 || ||||| ||||| ||||||||||||||||||||||| | ||| |||||||| | |||| Sbjct: 1319 acagttgattctccattggggcttggtagacgctcacataactgattagcataattcaat 1260 Query: 636 atcagctcctttgttttgttctcacggagctggttctctatccacacaacagccatctca 695 ||||||||||| ||||| || || || ||||||||||||||||||||||||||||||||| Sbjct: 1259 atcagctccttcgttttattttcgcgtagctggttctctatccacacaacagccatctca 1200 Query: 696 ca 697 || Sbjct: 1199 ca 1198
>gb|AY103665.1| Zea mays PCO108960 mRNA sequence Length = 1413 Score = 337 bits (170), Expect = 3e-89 Identities = 329/382 (86%) Strand = Plus / Minus Query: 330 gattctgcgaacccgattctgtccttgccgaagtcgaacacggtgtggtaaccgcccatg 389 ||||| ||||| || || ||||| ||||||||||||||||| ||||||||| | |||||| Sbjct: 1116 gattccgcgaagccaatcctgtcgttgccgaagtcgaacaccgtgtggtaagctcccatg 1057 Query: 390 aagacatccccgagaatccagagaggaccgcgtgggggcggtatgtcgaatgccatgaac 449 ||||| ||||| ||||||||||||||||| || || || || | ||| | ||||||||| Sbjct: 1056 aagacgtccccaagaatccagagaggaccacgcggcggtggcacgtcatacgccatgaac 997 Query: 450 ccactgatgcagacggtctgccctgattgctccagtttcacaatgtactgctctggtgtt 509 ||||||||||||||||| || ||| ||||||||| |||||||||||||||| |||||| Sbjct: 996 ccactgatgcagacggtttggcctccttgctccagcttcacaatgtactgctggggtgtt 937 Query: 510 agcacgaaagtcttgtttgctatggcgaaagcaagatttggcatctttgacatctcatgg 569 || ||| ||||||||||| |||| ||| ||||| | |||||||| || ||||| ||| Sbjct: 936 agggtgaaggtcttgtttgcgatggtgaacgcaaggctgggcatcttggagatctcctgg 877 Query: 570 cagctgactgttgactctccgttggggcttggtagacgctcacacagctggttagcatat 629 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| || Sbjct: 876 cagctgactgttgactctccgttggggctcggcagacgctcacacagctggttagcgtac 817 Query: 630 tgcaatatcagctcctttgttttgttctcacggagctggttctctatccacacaacagcc 689 |||| ||| |||||||| || ||||| || ||||||||||||||||||||||| |||||| Sbjct: 816 tgcagtatgagctccttggtcttgttttcgcggagctggttctctatccacacgacagcc 757 Query: 690 atctcacaggctgtgcacatga 711 |||| |||||| | |||||||| Sbjct: 756 atctgacaggccgagcacatga 735
>gb|AY103982.1| Zea mays PCO140262 mRNA sequence Length = 1929 Score = 248 bits (125), Expect = 2e-62 Identities = 287/341 (84%) Strand = Plus / Minus Query: 357 ccgaagtcgaacacggtgtggtaaccgcccatgaagacatccccgagaatccagagagga 416 |||||||| || || |||||||| | ||||| || ||||| || || |||||||||||| Sbjct: 1621 ccgaagtcaaaaacagtgtggtaggcacccataaaaacatcaccaagtatccagagagga 1562 Query: 417 ccgcgtgggggcggtatgtcgaatgccatgaacccactgatgcagacggtctgccctgat 476 || || || ||||||| ||| |||||||| |||||||||||||||| || || |||| | Sbjct: 1561 ccacgaggaggcggtacgtcaaatgccataaacccactgatgcagatagtttgtcctgct 1502 Query: 477 tgctccagtttcacaatgtactgctctggtgttagcacgaaagtcttgtttgctatggcg 536 |||||||| ||||| ||||||||||||||||||| |||||||||||||||||||| | Sbjct: 1501 tgctccagcttcactatgtactgctctggtgttaaggtgaaagtcttgtttgctatggtg 1442 Query: 537 aaagcaagatttggcatctttgacatctcatggcagctgactgttgactctccgttgggg 596 || |||||||||||||||||||| |||| |||||| || |||||||| || |||||| Sbjct: 1441 aatgcaagatttggcatctttgagatctgatggcaatcaacagttgactcgccattgggg 1382 Query: 597 cttggtagacgctcacacagctggttagcatattgcaatatcagctcctttgttttgttc 656 || || ||||||||||| ||||| |||||||| | ||| || || || ||||| ||||| Sbjct: 1381 ctagggagacgctcacagagctgattagcataattcaaaatgagttcttttgtcttgttt 1322 Query: 657 tcacggagctggttctctatccacacaacagccatctcaca 697 ||||||||||| |||| |||||| ||||||||||||||||| Sbjct: 1321 tcacggagctgattctgtatccagacaacagccatctcaca 1281
>dbj|AB028888.1| Oryza sativa RAP mRNA for aspartic proteinase, partial cds Length = 492 Score = 234 bits (118), Expect = 3e-58 Identities = 229/266 (86%) Strand = Plus / Minus Query: 336 gcgaacccgattctgtccttgccgaagtcgaacacggtgtggtaaccgcccatgaagaca 395 |||| |||||| ||||| |||||||||||||| || || || ||| | |||||||||||| Sbjct: 266 gcgaccccgatcctgtctttgccgaagtcgaaaaccgtatgataagcacccatgaagaca 207 Query: 396 tccccgagaatccagagaggaccgcgtgggggcggtatgtcgaatgccatgaacccactg 455 || || |||||||| |||||||||||||| || ||||||||||| ||||||||||| ||| Sbjct: 206 tctccaagaatccaaagaggaccgcgtggtggaggtatgtcgaacgccatgaacccgctg 147 Query: 456 atgcagacggtctgccctgattgctccagtttcacaatgtactgctctggtgttagcacg 515 ||||||||||| |||||| ||||||||||||||| ||||||||||||||||| || | Sbjct: 146 atgcagacggtttgccctccttgctccagtttcacgatgtactgctctggtgtaagaata 87 Query: 516 aaagtcttgtttgctatggcgaaagcaagatttggcatctttgacatctcatggcagctg 575 || ||| ||||||| |||| ||| |||||||| |||||||| || || | |||||||||| Sbjct: 86 aatgtcctgtttgcaatggtgaatgcaagattaggcatcttcgagatttgatggcagctg 27 Query: 576 actgttgactctccgttggggcttgg 601 || ||||| ||||| ||||||||||| Sbjct: 26 acagttgattctccattggggcttgg 1
>gb|BT018637.1| Zea mays clone EL01N0504C03.d mRNA sequence Length = 1568 Score = 178 bits (90), Expect = 2e-41 Identities = 225/270 (83%) Strand = Plus / Minus Query: 356 gccgaagtcgaacacggtgtggtaaccgcccatgaagacatccccgagaatccagagagg 415 ||||||||| || || |||||||| | | ||| || ||||| || || ||||||||||| Sbjct: 1247 gccgaagtcaaaaacagtgtggtagacactcataaaaacatcaccaagtatccagagagg 1188 Query: 416 accgcgtgggggcggtatgtcgaatgccatgaacccactgatgcagacggtctgccctga 475 ||| || || ||||||| ||| |||||||| |||||||||||||||| || || |||| Sbjct: 1187 accacgaggaggcggtacgtcaaatgccataaacccactgatgcagatagtttgtcctgc 1128 Query: 476 ttgctccagtttcacaatgtactgctctggtgttagcacgaaagtcttgtttgctatggc 535 ||||||||| ||||| ||||||||||||||||||| ||||||||| |||||||||| Sbjct: 1127 ttgctccagcttcactatgtactgctctggtgttaaggtgaaagtcttatttgctatggt 1068 Query: 536 gaaagcaagatttggcatctttgacatctcatggcagctgactgttgactctccgttggg 595 ||| |||||||||||||||||||| |||| |||||| || |||||||| || ||||| Sbjct: 1067 gaatgcaagatttggcatctttgagatctgatggcaatcaacagttgactcgccattggg 1008 Query: 596 gcttggtagacgctcacacagctggttagc 625 ||| || ||||||||||| ||||| ||||| Sbjct: 1007 gctagggagacgctcacagagctgattagc 978
>ref|NM_183594.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1488 Score = 174 bits (88), Expect = 3e-40 Identities = 301/372 (80%) Strand = Plus / Minus Query: 323 tcaagccgattctgcgaacccgattctgtccttgccgaagtcgaacacggtgtggtaacc 382 |||||| || || |||||||| || |||| ||||| |||||||| || |||||||| | Sbjct: 1488 tcaagcagactcggcgaacccaatcctgtttttgccaaagtcgaagacagtgtggtatgc 1429 Query: 383 gcccatgaagacatccccgagaatccagagaggaccgcgtgggggcggtatgtcgaatgc 442 ||||||| || || || ||||||||||| || |||||||| || || | |||||| || Sbjct: 1428 agccatgaacacgtctccaagaatccagagtgggccgcgtggaggtggcacgtcgaacgc 1369 Query: 443 catgaacccactgatgcagacggtctgccctgattgctccagtttcacaatgtactgctc 502 ||||||||| |||||||| || || || ||| |||||||| ||||| | ||||||||| Sbjct: 1368 catgaacccgctgatgcaaacagtttgaccttgctgctccagcttcactacgtactgctc 1309 Query: 503 tggtgttagcacgaaagtcttgtttgctatggcgaaagcaagatttggcatctttgacat 562 |||||| | ||| |||||||||||||||| ||| | ||| || ||||| ||||| || Sbjct: 1308 tggtgtcaaggtgaaggtcttgtttgctatggtgaatgaaaggttcggcatgtttgagat 1249 Query: 563 ctcatggcagctgactgttgactctccgttggggcttggtagacgctcacacagctggtt 622 ||||| |||| ||||| || || || ||||||||||| |||||||| || ||||||| Sbjct: 1248 ctcatcgcagtcgactgccgattcgccattggggcttgggagacgctcgcagagctggtc 1189 Query: 623 agcatattgcaatatcagctcctttgttttgttctcacggagctggttctctatccacac 682 |||||||||||| || |||||| |||||| ||| | |||||||| |||| |||||| || Sbjct: 1188 agcatattgcaaaatgagctcccttgtttggttatgtcggagctgattctgtatccagac 1129 Query: 683 aacagccatctc 694 |||||||||||| Sbjct: 1128 aacagccatctc 1117
>dbj|AK104371.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-E08, full insert sequence Length = 1155 Score = 174 bits (88), Expect = 3e-40 Identities = 301/372 (80%) Strand = Plus / Minus Query: 323 tcaagccgattctgcgaacccgattctgtccttgccgaagtcgaacacggtgtggtaacc 382 |||||| || || |||||||| || |||| ||||| |||||||| || |||||||| | Sbjct: 771 tcaagcagactcggcgaacccaatcctgtttttgccaaagtcgaagacagtgtggtatgc 712 Query: 383 gcccatgaagacatccccgagaatccagagaggaccgcgtgggggcggtatgtcgaatgc 442 ||||||| || || || ||||||||||| || |||||||| || || | |||||| || Sbjct: 711 agccatgaacacgtctccaagaatccagagtgggccgcgtggaggtggcacgtcgaacgc 652 Query: 443 catgaacccactgatgcagacggtctgccctgattgctccagtttcacaatgtactgctc 502 ||||||||| |||||||| || || || ||| |||||||| ||||| | ||||||||| Sbjct: 651 catgaacccgctgatgcaaacagtttgaccttgctgctccagcttcactacgtactgctc 592 Query: 503 tggtgttagcacgaaagtcttgtttgctatggcgaaagcaagatttggcatctttgacat 562 |||||| | ||| |||||||||||||||| ||| | ||| || ||||| ||||| || Sbjct: 591 tggtgtcaaggtgaaggtcttgtttgctatggtgaatgaaaggttcggcatgtttgagat 532 Query: 563 ctcatggcagctgactgttgactctccgttggggcttggtagacgctcacacagctggtt 622 ||||| |||| ||||| || || || ||||||||||| |||||||| || ||||||| Sbjct: 531 ctcatcgcagtcgactgccgattcgccattggggcttgggagacgctcgcagagctggtc 472 Query: 623 agcatattgcaatatcagctcctttgttttgttctcacggagctggttctctatccacac 682 |||||||||||| || |||||| |||||| ||| | |||||||| |||| |||||| || Sbjct: 471 agcatattgcaaaatgagctcccttgtttggttatgtcggagctgattctgtatccagac 412 Query: 683 aacagccatctc 694 |||||||||||| Sbjct: 411 aacagccatctc 400
>dbj|AK072264.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023005B17, full insert sequence Length = 1778 Score = 174 bits (88), Expect = 3e-40 Identities = 301/372 (80%) Strand = Plus / Minus Query: 323 tcaagccgattctgcgaacccgattctgtccttgccgaagtcgaacacggtgtggtaacc 382 |||||| || || |||||||| || |||| ||||| |||||||| || |||||||| | Sbjct: 1572 tcaagcagactcggcgaacccaatcctgtttttgccaaagtcgaagacagtgtggtatgc 1513 Query: 383 gcccatgaagacatccccgagaatccagagaggaccgcgtgggggcggtatgtcgaatgc 442 ||||||| || || || ||||||||||| || |||||||| || || | |||||| || Sbjct: 1512 agccatgaacacgtctccaagaatccagagtgggccgcgtggaggtggcacgtcgaacgc 1453 Query: 443 catgaacccactgatgcagacggtctgccctgattgctccagtttcacaatgtactgctc 502 ||||||||| |||||||| || || || ||| |||||||| ||||| | ||||||||| Sbjct: 1452 catgaacccgctgatgcaaacagtttgaccttgctgctccagcttcactacgtactgctc 1393 Query: 503 tggtgttagcacgaaagtcttgtttgctatggcgaaagcaagatttggcatctttgacat 562 |||||| | ||| |||||||||||||||| ||| | ||| || ||||| ||||| || Sbjct: 1392 tggtgtcaaggtgaaggtcttgtttgctatggtgaatgaaaggttcggcatgtttgagat 1333 Query: 563 ctcatggcagctgactgttgactctccgttggggcttggtagacgctcacacagctggtt 622 ||||| |||| ||||| || || || ||||||||||| |||||||| || ||||||| Sbjct: 1332 ctcatcgcagtcgactgccgattcgccattggggcttgggagacgctcgcagagctggtc 1273 Query: 623 agcatattgcaatatcagctcctttgttttgttctcacggagctggttctctatccacac 682 |||||||||||| || |||||| |||||| ||| | |||||||| |||| |||||| || Sbjct: 1272 agcatattgcaaaatgagctcccttgtttggttatgtcggagctgattctgtatccagac 1213 Query: 683 aacagccatctc 694 |||||||||||| Sbjct: 1212 aacagccatctc 1201
>dbj|AK066523.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071P15, full insert sequence Length = 2061 Score = 174 bits (88), Expect = 3e-40 Identities = 301/372 (80%) Strand = Plus / Minus Query: 323 tcaagccgattctgcgaacccgattctgtccttgccgaagtcgaacacggtgtggtaacc 382 |||||| || || |||||||| || |||| ||||| |||||||| || |||||||| | Sbjct: 1653 tcaagcagactcggcgaacccaatcctgtttttgccaaagtcgaagacagtgtggtatgc 1594 Query: 383 gcccatgaagacatccccgagaatccagagaggaccgcgtgggggcggtatgtcgaatgc 442 ||||||| || || || ||||||||||| || |||||||| || || | |||||| || Sbjct: 1593 agccatgaacacgtctccaagaatccagagtgggccgcgtggaggtggcacgtcgaacgc 1534 Query: 443 catgaacccactgatgcagacggtctgccctgattgctccagtttcacaatgtactgctc 502 ||||||||| |||||||| || || || ||| |||||||| ||||| | ||||||||| Sbjct: 1533 catgaacccgctgatgcaaacagtttgaccttgctgctccagcttcactacgtactgctc 1474 Query: 503 tggtgttagcacgaaagtcttgtttgctatggcgaaagcaagatttggcatctttgacat 562 |||||| | ||| |||||||||||||||| ||| | ||| || ||||| ||||| || Sbjct: 1473 tggtgtcaaggtgaaggtcttgtttgctatggtgaatgaaaggttcggcatgtttgagat 1414 Query: 563 ctcatggcagctgactgttgactctccgttggggcttggtagacgctcacacagctggtt 622 ||||| |||| ||||| || || || ||||||||||| |||||||| || ||||||| Sbjct: 1413 ctcatcgcagtcgactgccgattcgccattggggcttgggagacgctcgcagagctggtc 1354 Query: 623 agcatattgcaatatcagctcctttgttttgttctcacggagctggttctctatccacac 682 |||||||||||| || |||||| |||||| ||| | |||||||| |||| |||||| || Sbjct: 1353 agcatattgcaaaatgagctcccttgtttggttatgtcggagctgattctgtatccagac 1294 Query: 683 aacagccatctc 694 |||||||||||| Sbjct: 1293 aacagccatctc 1282
>dbj|AK100420.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088B02, full insert sequence Length = 1853 Score = 167 bits (84), Expect = 6e-38 Identities = 300/372 (80%) Strand = Plus / Minus Query: 323 tcaagccgattctgcgaacccgattctgtccttgccgaagtcgaacacggtgtggtaacc 382 |||||| || || |||||||| || |||| ||||| |||||||| || |||||||| | Sbjct: 1599 tcaagcagactcggcgaacccaatcctgtttttgccaaagtcgaagacagtgtggtatgc 1540 Query: 383 gcccatgaagacatccccgagaatccagagaggaccgcgtgggggcggtatgtcgaatgc 442 ||||||| || || || ||||||||||| || |||||||| || || | |||||| || Sbjct: 1539 agccatgaacacgtctccaagaatccagagtgggccgcgtggaggtggcacgtcgaacgc 1480 Query: 443 catgaacccactgatgcagacggtctgccctgattgctccagtttcacaatgtactgctc 502 ||||||||| |||||||| || || || ||| |||||||| ||||| | ||||||||| Sbjct: 1479 catgaacccgctgatgcaaacagtttgaccttgctgctccagcttcactacgtactgctc 1420 Query: 503 tggtgttagcacgaaagtcttgtttgctatggcgaaagcaagatttggcatctttgacat 562 |||||| | ||| |||||||||||||||| ||| | ||| || ||||| ||||| || Sbjct: 1419 tggtgtcaaggtgaaggtcttgtttgctatggtgaatgaaaggttcggcatgtttgagat 1360 Query: 563 ctcatggcagctgactgttgactctccgttggggcttggtagacgctcacacagctggtt 622 ||||| |||| ||||| || || || ||||||||||| |||||||| || |||||| Sbjct: 1359 ctcatcgcagtcgactgccgattcgccattggggcttgggagacgctcgcagagctggcc 1300 Query: 623 agcatattgcaatatcagctcctttgttttgttctcacggagctggttctctatccacac 682 |||||||||||| || |||||| |||||| ||| | |||||||| |||| |||||| || Sbjct: 1299 agcatattgcaaaatgagctcccttgtttggttatgtcggagctgattctgtatccagac 1240 Query: 683 aacagccatctc 694 |||||||||||| Sbjct: 1239 aacagccatctc 1228
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 115 bits (58), Expect = 2e-22 Identities = 82/90 (91%) Strand = Plus / Minus Query: 411 agaggaccgcgtgggggcggtatgtcgaatgccatgaacccactgatgcagacggtctgc 470 |||||||||||||| || ||||||||||| ||||||||||| |||||||||||||| ||| Sbjct: 2118238 agaggaccgcgtggtggaggtatgtcgaacgccatgaacccgctgatgcagacggtttgc 2118179 Query: 471 cctgattgctccagtttcacaatgtactgc 500 ||| ||||||||||||||| ||||||||| Sbjct: 2118178 cctccttgctccagtttcacgatgtactgc 2118149 Score = 105 bits (53), Expect = 2e-19 Identities = 101/117 (86%) Strand = Plus / Minus Query: 497 ctgctctggtgttagcacgaaagtcttgtttgctatggcgaaagcaagatttggcatctt 556 |||||||||||| || | || ||||||||||| |||| ||| |||||||| |||||||| Sbjct: 2117666 ctgctctggtgtaagaataaatgtcttgtttgcaatggtgaatgcaagattaggcatctt 2117607 Query: 557 tgacatctcatggcagctgactgttgactctccgttggggcttggtagacgctcaca 613 || || | |||||||||||| ||||| ||||| ||||||||||||||||||||||| Sbjct: 2117606 cgagatttgatggcagctgacagttgattctccattggggcttggtagacgctcaca 2117550 Score = 97.6 bits (49), Expect = 5e-17 Identities = 70/77 (90%) Strand = Plus / Minus Query: 621 ttagcatattgcaatatcagctcctttgttttgttctcacggagctggttctctatccac 680 |||||||| | ||||||||||||||| ||||| || || || |||||||||||||||||| Sbjct: 2117462 ttagcataattcaatatcagctccttcgttttattttcgcgtagctggttctctatccac 2117403 Query: 681 acaacagccatctcaca 697 ||||||||||||||||| Sbjct: 2117402 acaacagccatctcaca 2117386 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 336 gcgaacccgattctgtccttgccgaagtcgaacacggtgtggtaaccgcccatgaagaca 395 ||||||||||| ||||| |||||||||||||| || || || ||| | |||||||||||| Sbjct: 2118420 gcgaacccgatcctgtctttgccgaagtcgaaaaccgtatgataagcacccatgaagaca 2118361 Query: 396 tccccgagaatcc 408 || || ||||||| Sbjct: 2118360 tctccaagaatcc 2118348 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 666 tggttctctatccacacaacagccatctcacaggctgtgcacatg 710 ||||||| ||||| |||||||||||||||||||| |||||||| Sbjct: 28016034 tggttctgcatccatacaacagccatctcacaggcattgcacatg 28015990
>gb|AC093490.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1127_B08, complete sequence Length = 112268 Score = 115 bits (58), Expect = 2e-22 Identities = 82/90 (91%) Strand = Plus / Minus Query: 411 agaggaccgcgtgggggcggtatgtcgaatgccatgaacccactgatgcagacggtctgc 470 |||||||||||||| || ||||||||||| ||||||||||| |||||||||||||| ||| Sbjct: 85079 agaggaccgcgtggtggaggtatgtcgaacgccatgaacccgctgatgcagacggtttgc 85020 Query: 471 cctgattgctccagtttcacaatgtactgc 500 ||| ||||||||||||||| ||||||||| Sbjct: 85019 cctccttgctccagtttcacgatgtactgc 84990 Score = 105 bits (53), Expect = 2e-19 Identities = 101/117 (86%) Strand = Plus / Minus Query: 497 ctgctctggtgttagcacgaaagtcttgtttgctatggcgaaagcaagatttggcatctt 556 |||||||||||| || | || ||||||||||| |||| ||| |||||||| |||||||| Sbjct: 84507 ctgctctggtgtaagaataaatgtcttgtttgcaatggtgaatgcaagattaggcatctt 84448 Query: 557 tgacatctcatggcagctgactgttgactctccgttggggcttggtagacgctcaca 613 || || | |||||||||||| ||||| ||||| ||||||||||||||||||||||| Sbjct: 84447 cgagatttgatggcagctgacagttgattctccattggggcttggtagacgctcaca 84391 Score = 97.6 bits (49), Expect = 5e-17 Identities = 70/77 (90%) Strand = Plus / Minus Query: 621 ttagcatattgcaatatcagctcctttgttttgttctcacggagctggttctctatccac 680 |||||||| | ||||||||||||||| ||||| || || || |||||||||||||||||| Sbjct: 84303 ttagcataattcaatatcagctccttcgttttattttcgcgtagctggttctctatccac 84244 Query: 681 acaacagccatctcaca 697 ||||||||||||||||| Sbjct: 84243 acaacagccatctcaca 84227 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 336 gcgaacccgattctgtccttgccgaagtcgaacacggtgtggtaaccgcccatgaagaca 395 ||||||||||| ||||| |||||||||||||| || || || ||| | |||||||||||| Sbjct: 85261 gcgaacccgatcctgtctttgccgaagtcgaaaaccgtatgataagcacccatgaagaca 85202 Query: 396 tccccgagaatcc 408 || || ||||||| Sbjct: 85201 tctccaagaatcc 85189
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 617 ctggttagcatattgcaatatcagctcctttgttttgttctcacggagctggttctctat 676 ||||| |||||||||||| || |||||| |||||| ||| | |||||||| |||| ||| Sbjct: 10491107 ctggtcagcatattgcaaaatgagctcccttgtttggttatgtcggagctgattctgtat 10491166 Query: 677 ccacacaacagccatctc 694 ||| |||||||||||||| Sbjct: 10491167 ccagacaacagccatctc 10491184 Score = 56.0 bits (28), Expect = 2e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 519 gtcttgtttgctatggcgaaagcaagatttggcatctttgacatctcatggcagctgact 578 |||||||||||||||| ||| | ||| || ||||| ||||| ||||||| |||| |||| Sbjct: 10490922 gtcttgtttgctatggtgaatgaaaggttcggcatgtttgagatctcatcgcagtcgact 10490981 Query: 579 gttgactctccgttggggcttggtagacgctc 610 | || || || ||||||||||| |||||||| Sbjct: 10490982 gccgattcgccattggggcttgggagacgctc 10491013 Score = 44.1 bits (22), Expect = 0.62 Identities = 46/54 (85%) Strand = Plus / Plus Query: 407 ccagagaggaccgcgtgggggcggtatgtcgaatgccatgaacccactgatgca 460 |||||| || |||||||| || || | |||||| ||||||||||| |||||||| Sbjct: 10490721 ccagagtgggccgcgtggaggtggcacgtcgaacgccatgaacccgctgatgca 10490774
>dbj|AP002480.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0469E05 Length = 160769 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 617 ctggttagcatattgcaatatcagctcctttgttttgttctcacggagctggttctctat 676 ||||| |||||||||||| || |||||| |||||| ||| | |||||||| |||| ||| Sbjct: 136067 ctggtcagcatattgcaaaatgagctcccttgtttggttatgtcggagctgattctgtat 136126 Query: 677 ccacacaacagccatctc 694 ||| |||||||||||||| Sbjct: 136127 ccagacaacagccatctc 136144 Score = 56.0 bits (28), Expect = 2e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 519 gtcttgtttgctatggcgaaagcaagatttggcatctttgacatctcatggcagctgact 578 |||||||||||||||| ||| | ||| || ||||| ||||| ||||||| |||| |||| Sbjct: 135882 gtcttgtttgctatggtgaatgaaaggttcggcatgtttgagatctcatcgcagtcgact 135941 Query: 579 gttgactctccgttggggcttggtagacgctc 610 | || || || ||||||||||| |||||||| Sbjct: 135942 gccgattcgccattggggcttgggagacgctc 135973 Score = 44.1 bits (22), Expect = 0.62 Identities = 46/54 (85%) Strand = Plus / Plus Query: 407 ccagagaggaccgcgtgggggcggtatgtcgaatgccatgaacccactgatgca 460 |||||| || |||||||| || || | |||||| ||||||||||| |||||||| Sbjct: 135681 ccagagtgggccgcgtggaggtggcacgtcgaacgccatgaacccgctgatgca 135734
>emb|X56136.1|HVASPROT Barley mRNA for aspartic proteinase Length = 1800 Score = 63.9 bits (32), Expect = 7e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 353 cttgccgaagtcgaacacggtgtggtaaccgcccatgaagacatccccgagaatccagag 412 ||||||| |||| || ||||||||||| |||||||||||| || || || |||||||| Sbjct: 1532 cttgccgtagtcaaagacggtgtggtacgggcccatgaagacgtctcccaggatccagag 1473 Query: 413 aggaccgcgtgggggcggtatgtc 436 ||||||||| || ||||| ||||| Sbjct: 1472 aggaccgcgaggaggcgggatgtc 1449 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 666 tggttctctatccacacaacagccatctcacaggctgtgcacatg 710 ||||||| ||||| |||||||||||||||||||| |||||||| Sbjct: 1219 tggttctgcatccatacaacagccatctcacaggcactgcacatg 1175
>dbj|AB219968.1| Triticum aestivum WAP1 mRNA for aspartic proteinase, complete cds Length = 1527 Score = 63.9 bits (32), Expect = 7e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 353 cttgccgaagtcgaacacggtgtggtaaccgcccatgaagacatccccgagaatccagag 412 ||||||| ||||||| ||||||||||| ||||||||| || || || || |||||||| Sbjct: 1497 cttgccgtagtcgaagacggtgtggtaggggcccatgaaaacgtctcccaggatccagag 1438 Query: 413 aggaccgcgtgggggcggtatgtc 436 ||||||||| || ||||| ||||| Sbjct: 1437 aggaccgcgaggaggcgggatgtc 1414 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 666 tggttctctatccacacaacagccatctcacaggctgtgcacatg 710 ||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1184 tggttctgcatccacacaacagccatctcacaggcactgcacatg 1140
>gb|AY389666.1| Hyacinthus orientalis aspartic proteinase mRNA, partial cds Length = 585 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 363 tcgaacacggtgtggtaaccgcccatgaagacatccccgagaatccagagaggaccgcgt 422 |||||| ||||||| ||| ||| |||||||||||| || | ||||||||||||||| || Sbjct: 387 tcgaactcggtgtgataagcgctcatgaagacatcacccaaaatccagagaggaccccgc 328 Query: 423 gggggcggta 432 || ||||||| Sbjct: 327 ggtggcggta 318
>dbj|AB091763.1| Glycine max soyAP5 mRNA for aspartic proteinase 5, partial cds Length = 636 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 386 catgaagacatccccgagaatccagagaggaccgcgtgggggcggtatgtcgaatgccat 445 |||||| |||||||| ||||||||||||||||| ||||| || || ||||| || || || Sbjct: 465 catgaaaacatccccaagaatccagagaggaccccgtggaggaggaatgtcaaaagcaat 406 Query: 446 gaacccact 454 |||||||| Sbjct: 405 aaacccact 397
>ref|NM_001025621.1| Canis familiaris cathepsin D (lysosomal aspartyl peptidase) (CTSD), mRNA Length = 1524 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 362 gtcgaacacggtgtggtaaccgcccatgaagacatccccgagaatccagagaggaccgc 420 |||||||||||||| ||| | ||| ||||||||||| || || ||||||||||| |||| Sbjct: 1257 gtcgaacacggtgtagtagcagccgatgaagacatcacccaggatccagagaggcccgc 1199
>emb|AM048627.1| Canis familiaris mRNA for cathepsin D (ctsd gene) Length = 1524 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 362 gtcgaacacggtgtggtaaccgcccatgaagacatccccgagaatccagagaggaccgc 420 |||||||||||||| ||| | ||| ||||||||||| || || ||||||||||| |||| Sbjct: 1257 gtcgaacacggtgtagtagcagccgatgaagacatcacccaggatccagagaggcccgc 1199
>dbj|AK100749.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118K01, full insert sequence Length = 1086 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 352 ccttgccgaagtcgaacacggtgtggtaaccgcccatgaagacatccccgagaatccaga 411 |||||||| ||||||||||||| ||||| | |||||||| || || || || ||||||| Sbjct: 773 ccttgccgtagtcgaacacggtatggtaggcacccatgaaaacgtcacccaggatccaga 714 Query: 412 gaggacc 418 ||||||| Sbjct: 713 gaggacc 707 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 666 tggttctctatccacacaacagccatctcacaggctgtgcacatg 710 ||||||| ||||| |||||||||||||||||||| |||||||| Sbjct: 459 tggttctgcatccatacaacagccatctcacaggcattgcacatg 415
>dbj|AB045892.1| Nepenthes alata NaAP2 mRNA for aspartic proteinase 2, complete cds Length = 1839 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 675 atccacacaacagccatctcacaggctgtgcacat 709 ||||||||||| ||||||||||| ||||||||||| Sbjct: 1259 atccacacaactgccatctcacaagctgtgcacat 1225
>gb|AF285164.1| Oryza sativa subsp. japonica aspartic protease mRNA, partial cds Length = 562 Score = 52.0 bits (26), Expect = 0.003 Identities = 56/66 (84%) Strand = Plus / Minus Query: 353 cttgccgaagtcgaacacggtgtggtaaccgcccatgaagacatccccgagaatccagag 412 ||||||| ||||||||||||| ||||| | |||||||| || || || || |||||||| Sbjct: 327 cttgccgtagtcgaacacggtatggtaggcacccatgaaaacgtcacccaggatccagag 268 Query: 413 aggacc 418 |||||| Sbjct: 267 aggacc 262
>dbj|AK104838.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-E12, full insert sequence Length = 1777 Score = 52.0 bits (26), Expect = 0.003 Identities = 56/66 (84%) Strand = Plus / Minus Query: 353 cttgccgaagtcgaacacggtgtggtaaccgcccatgaagacatccccgagaatccagag 412 ||||||| ||||||||||||| ||||| | |||||||| || || || || |||||||| Sbjct: 1563 cttgccgtagtcgaacacggtatggtaggcacccatgaaaacgtcacccaggatccagag 1504 Query: 413 aggacc 418 |||||| Sbjct: 1503 aggacc 1498 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 666 tggttctctatccacacaacagccatctcacaggctgtgcacatg 710 ||||||| ||||| |||||||||||||||||||| |||||||| Sbjct: 1250 tggttctgcatccatacaacagccatctcacaggcattgcacatg 1206
>dbj|AK103421.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128K05, full insert sequence Length = 1818 Score = 52.0 bits (26), Expect = 0.003 Identities = 56/66 (84%) Strand = Plus / Minus Query: 353 cttgccgaagtcgaacacggtgtggtaaccgcccatgaagacatccccgagaatccagag 412 ||||||| ||||||||||||| ||||| | |||||||| || || || || |||||||| Sbjct: 1564 cttgccgtagtcgaacacggtatggtaggcacccatgaaaacgtcacccaggatccagag 1505 Query: 413 aggacc 418 |||||| Sbjct: 1504 aggacc 1499 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 666 tggttctctatccacacaacagccatctcacaggctgtgcacatg 710 ||||||| ||||| |||||||||||||||||||| |||||||| Sbjct: 1251 tggttctgcatccatacaacagccatctcacaggcattgcacatg 1207
>dbj|AK098911.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H22, full insert sequence Length = 1844 Score = 52.0 bits (26), Expect = 0.003 Identities = 56/66 (84%) Strand = Plus / Minus Query: 353 cttgccgaagtcgaacacggtgtggtaaccgcccatgaagacatccccgagaatccagag 412 ||||||| ||||||||||||| ||||| | |||||||| || || || || |||||||| Sbjct: 1566 cttgccgtagtcgaacacggtatggtaggcacccatgaaaacgtcacccaggatccagag 1507 Query: 413 aggacc 418 |||||| Sbjct: 1506 aggacc 1501 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 666 tggttctctatccacacaacagccatctcacaggctgtgcacatg 710 ||||||| ||||| |||||||||||||||||||| |||||||| Sbjct: 1253 tggttctgcatccatacaacagccatctcacaggcattgcacatg 1209
>dbj|AK098906.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002D14, full insert sequence Length = 1843 Score = 52.0 bits (26), Expect = 0.003 Identities = 56/66 (84%) Strand = Plus / Minus Query: 353 cttgccgaagtcgaacacggtgtggtaaccgcccatgaagacatccccgagaatccagag 412 ||||||| ||||||||||||| ||||| | |||||||| || || || || |||||||| Sbjct: 1561 cttgccgtagtcgaacacggtatggtaggcacccatgaaaacgtcacccaggatccagag 1502 Query: 413 aggacc 418 |||||| Sbjct: 1501 aggacc 1496 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 666 tggttctctatccacacaacagccatctcacaggctgtgcacatg 710 ||||||| ||||| |||||||||||||||||||| |||||||| Sbjct: 1248 tggttctgcatccatacaacagccatctcacaggcattgcacatg 1204
>dbj|AK067742.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116C15, full insert sequence Length = 1869 Score = 52.0 bits (26), Expect = 0.003 Identities = 56/66 (84%) Strand = Plus / Minus Query: 353 cttgccgaagtcgaacacggtgtggtaaccgcccatgaagacatccccgagaatccagag 412 ||||||| ||||||||||||| ||||| | |||||||| || || || || |||||||| Sbjct: 1564 cttgccgtagtcgaacacggtatggtaggcacccatgaaaacgtcacccaggatccagag 1505 Query: 413 aggacc 418 |||||| Sbjct: 1504 aggacc 1499 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 666 tggttctctatccacacaacagccatctcacaggctgtgcacatg 710 ||||||| ||||| |||||||||||||||||||| |||||||| Sbjct: 1251 tggttctgcatccatacaacagccatctcacaggcattgcacatg 1207
>dbj|AK066453.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059L24, full insert sequence Length = 2543 Score = 52.0 bits (26), Expect = 0.003 Identities = 56/66 (84%) Strand = Plus / Minus Query: 353 cttgccgaagtcgaacacggtgtggtaaccgcccatgaagacatccccgagaatccagag 412 ||||||| ||||||||||||| ||||| | |||||||| || || || || |||||||| Sbjct: 2195 cttgccgtagtcgaacacggtatggtaggcacccatgaaaacgtcacccaggatccagag 2136 Query: 413 aggacc 418 |||||| Sbjct: 2135 aggacc 2130 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 666 tggttctctatccacacaacagccatctcacaggctgtgcacatg 710 ||||||| ||||| |||||||||||||||||||| |||||||| Sbjct: 1882 tggttctgcatccatacaacagccatctcacaggcattgcacatg 1838
>dbj|D32144.1|RICAPA Rice mRNA for aspartic protease, complete cds Length = 2030 Score = 52.0 bits (26), Expect = 0.003 Identities = 56/66 (84%) Strand = Plus / Minus Query: 353 cttgccgaagtcgaacacggtgtggtaaccgcccatgaagacatccccgagaatccagag 412 ||||||| ||||||||||||| ||||| | |||||||| || || || || |||||||| Sbjct: 1553 cttgccgtagtcgaacacggtatggtaggcacccatgaaaacgtcacccaggatccagag 1494 Query: 413 aggacc 418 |||||| Sbjct: 1493 aggacc 1488 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 666 tggttctctatccacacaacagccatctcacaggctgtgcacatg 710 ||||||| ||||| |||||||||||||||||||| |||||||| Sbjct: 1240 tggttctgcatccatacaacagccatctcacaggcattgcacatg 1196
>gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1781_H11, complete sequence Length = 204649 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 666 tggttctctatccacacaacagccatctcacaggctgtgcacatg 710 ||||||| ||||| |||||||||||||||||||| |||||||| Sbjct: 96199 tggttctgcatccatacaacagccatctcacaggcattgcacatg 96155
>gb|AY672651.1| Solanum tuberosum Asp mRNA, complete cds Length = 1680 Score = 50.1 bits (25), Expect = 0.010 Identities = 52/61 (85%) Strand = Plus / Minus Query: 361 agtcgaacacggtgtggtaaccgcccatgaagacatccccgagaatccagagaggaccgc 420 |||||||||| |||||||| |||||||| ||||| || |||||||| |||||||||| Sbjct: 1454 agtcgaacacagtgtggtacggccccatgaatacatctccaagaatccaaagaggaccgc 1395 Query: 421 g 421 | Sbjct: 1394 g 1394 Score = 42.1 bits (21), Expect = 2.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 662 gagctggttctctatccacacaacagccatctcacaggctgtgca 706 ||||||||| | ||||| ||||| |||||||||||||| ||||| Sbjct: 1153 gagctggttttgcatccaaacaactgccatctcacaggcagtgca 1109
>dbj|D32165.1|RICAP Rice gene for aspartic protease, complete cds Length = 6782 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 666 tggttctctatccacacaacagccatctcacaggctgtgcacatg 710 ||||||| ||||| |||||||||||||||||||| |||||||| Sbjct: 5563 tggttctgcatccatacaacagccatctcacaggcattgcacatg 5519
>emb|X88774.1|BORNAPAP B.oleracea mRNA for putative aspartic protease (partial) Length = 431 Score = 48.1 bits (24), Expect = 0.040 Identities = 48/56 (85%) Strand = Plus / Minus Query: 360 aagtcgaacacggtgtggtaaccgcccatgaagacatccccgagaatccagagagg 415 ||||| |||||||||||||| ||||||||| ||||| || || ||||||||||| Sbjct: 239 aagtcaaacacggtgtggtatttgcccatgaacacatctccaaggatccagagagg 184
>ref|NM_101062.2| Arabidopsis thaliana aspartic-type endopeptidase/ pepsin A AT1G11910 mRNA, complete cds Length = 1898 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 675 atccacacaacagccatctcaca 697 ||||||||||||||||||||||| Sbjct: 1218 atccacacaacagccatctcaca 1196
>gb|AY063974.1| Arabidopsis thaliana putative aspartic proteinase (At1g11910) mRNA, complete cds Length = 1830 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 675 atccacacaacagccatctcaca 697 ||||||||||||||||||||||| Sbjct: 1218 atccacacaacagccatctcaca 1196
>emb|AJ313385.1|TCA313385 Theobroma cacao mRNA for aspartic proteinase (ap2 gene) Length = 1828 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 369 acggtgtggtaaccgcccatgaagacatccccgagaatccagagagg 415 ||||||||||| | |||||||||| ||| || |||||||||||||| Sbjct: 1560 acggtgtggtagcgacccatgaagatatctcccagaatccagagagg 1514 Score = 40.1 bits (20), Expect = 9.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 666 tggttctctatccacacaacagccatctcaca 697 ||||||| ||||||||||| ||||||||||| Sbjct: 1263 tggttctgcatccacacaactgccatctcaca 1232
>gb|AY056403.1| Arabidopsis thaliana At1g11910/F12F1_24 mRNA, complete cds Length = 1820 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 675 atccacacaacagccatctcaca 697 ||||||||||||||||||||||| Sbjct: 1218 atccacacaacagccatctcaca 1196
>gb|AY056387.1| Arabidopsis thaliana At1g11910/F12F1_24 mRNA, complete cds Length = 1874 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 675 atccacacaacagccatctcaca 697 ||||||||||||||||||||||| Sbjct: 1218 atccacacaacagccatctcaca 1196
>dbj|AK221098.1| Arabidopsis thaliana mRNA for putative aspartic proteinase, complete cds, clone: RAFL22-84-P18 Length = 721 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 675 atccacacaacagccatctcaca 697 ||||||||||||||||||||||| Sbjct: 114 atccacacaacagccatctcaca 92
>dbj|AK221202.1| Arabidopsis thaliana mRNA for putative aspartic proteinase, complete cds, clone: RAFL23-06-J05 Length = 1039 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 675 atccacacaacagccatctcaca 697 ||||||||||||||||||||||| Sbjct: 342 atccacacaacagccatctcaca 320
>gb|AC008775.7| Homo sapiens chromosome 5 clone CTD-2019N2, complete sequence Length = 135503 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 217 tttgtttcagcttttttacttat 239 ||||||||||||||||||||||| Sbjct: 105467 tttgtttcagcttttttacttat 105489
>gb|AY088657.1| Arabidopsis thaliana clone 8972 mRNA, complete sequence Length = 1814 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 675 atccacacaacagccatctcaca 697 ||||||||||||||||||||||| Sbjct: 1218 atccacacaacagccatctcaca 1196
>dbj|AB069959.1| Glycine max soyAP1 mRNA for aspartic proteinase 1, complete cds Length = 1719 Score = 46.1 bits (23), Expect = 0.16 Identities = 50/59 (84%) Strand = Plus / Minus Query: 366 aacacggtgtggtaaccgcccatgaagacatccccgagaatccagagaggaccgcgtgg 424 ||||| ||||| |||| |||||||||||||| || || ||||||||||| || ||||| Sbjct: 1502 aacactgtgtgataacgccccatgaagacatcaccaaggatccagagagggccacgtgg 1444
>gb|BT001980.1| Arabidopsis thaliana clone U11602 putative aspartic proteinase (At1g11910) mRNA, complete cds Length = 1552 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 675 atccacacaacagccatctcaca 697 ||||||||||||||||||||||| Sbjct: 1169 atccacacaacagccatctcaca 1147
>gb|U51036.1|ATU51036 Arabidopsis thaliana aspartic proteinase mRNA, partial cds Length = 1722 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 675 atccacacaacagccatctcaca 697 ||||||||||||||||||||||| Sbjct: 1110 atccacacaacagccatctcaca 1088
>gb|AC002131.1|F12F1 Arabidopsis thaliana chromosome 1 BAC F12F1 sequence, complete sequence Length = 123386 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 675 atccacacaacagccatctcaca 697 ||||||||||||||||||||||| Sbjct: 96881 atccacacaacagccatctcaca 96859
>gb|L46681.1|TOMAPP Lycopersicon esculentum aspartic protease precursor mRNA, complete cds Length = 1740 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 662 gagctggttctctatccacacaacagccatctcacaggctgtgcaca 708 ||||||||| | ||||| ||||| |||||||||||||| ||||||| Sbjct: 1200 gagctggttttgcatccaaacaactgccatctcacaggcagtgcaca 1154 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 384 cccatgaagacatccccgagaatccagagaggaccgcg 421 |||||||| ||||| || |||||||| ||||||||||| Sbjct: 1478 cccatgaatacatctccaagaatccaaagaggaccgcg 1441
>gb|S80547.1| procathepsin E [guinea pigs, gastric mucosa, mRNA, 1326 nt] Length = 1326 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 387 atgaagacatccccgagaatccagag 412 ||||||||||||||||| |||||||| Sbjct: 1153 atgaagacatccccgaggatccagag 1128
>gb|DQ241852.1| Solanum tuberosum clone 188C11 aspartic protease precursor-like mRNA, complete cds Length = 1764 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 384 cccatgaagacatccccgagaatccagagaggaccgcg 421 |||||||| ||||| || |||||||| ||||||||||| Sbjct: 1484 cccatgaatacatctccaagaatccaaagaggaccgcg 1447 Score = 42.1 bits (21), Expect = 2.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 662 gagctggttctctatccacacaacagccatctcacaggctgtgca 706 ||||||||| | ||||| ||||| |||||||||||||| ||||| Sbjct: 1206 gagctggttttgcatccaaacaactgccatctcacaggcagtgca 1162
>gb|M88653.1|GPIPROCAT Cavia porcellus procathepsin E mRNA, complete cds Length = 1326 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 387 atgaagacatccccgagaatccagag 412 ||||||||||||||||| |||||||| Sbjct: 1153 atgaagacatccccgaggatccagag 1128
>ref|XM_322285.1| Neurospora crassa OR74A ANTHRANILATE SYNTHASE COMPONENT II [INCLUDES: GLUTAMINE AMIDOTRANSFERASE; INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE (IGPS); N-(5'-PH> (NCU00200.1) partial mRNA Length = 2289 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 688 ccatctcacaggctgtgcacatgag 712 ||||||| ||||||||||||||||| Sbjct: 1718 ccatctcccaggctgtgcacatgag 1742
>ref|XM_951492.1| Neurospora crassa OR74A ANTHRANILATE SYNTHASE COMPONENT II [INCLUDES: GLUTAMINE AMIDOTRANSFERASE; INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE (IGPS); N-(5'-PH> (NCU00200.1) partial mRNA Length = 2289 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 688 ccatctcacaggctgtgcacatgag 712 ||||||| ||||||||||||||||| Sbjct: 1718 ccatctcccaggctgtgcacatgag 1742
>gb|AC005995.3| Homo sapiens PAC clone RP1-42M2 from 7, complete sequence Length = 80010 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 632 caatatcagctcctttgtttt 652 ||||||||||||||||||||| Sbjct: 58741 caatatcagctcctttgtttt 58761
>gb|AC121929.2| Mus musculus BAC clone RP24-204J10 from 5, complete sequence Length = 143840 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 104 ctccattcttcattacacagcaaca 128 ||||||||| ||||||||||||||| Sbjct: 52485 ctccattctccattacacagcaaca 52461
>ref|XM_533610.2| PREDICTED: Canis familiaris napsin 1 (LOC476406), mRNA Length = 1332 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 384 cccatgaagacatccccgagaatccagag 412 |||| ||||||||| |||||||||||||| Sbjct: 1130 cccaagaagacatcgccgagaatccagag 1102
>emb|X77260.1|BOASPR B. oleracea L. gene for aspartic protease (partial) Length = 1121 Score = 42.1 bits (21), Expect = 2.5 Identities = 81/101 (80%) Strand = Plus / Minus Query: 360 aagtcgaacacggtgtggtaaccgcccatgaagacatccccgagaatccagagaggaccg 419 ||||| |||||||||||||| ||||||||| ||||| || | ||||||||||| || Sbjct: 842 aagtcaaacacggtgtggtatttgcccatgaatacatctcccaagatccagagaggtcca 783 Query: 420 cgtgggggcggtatgtcgaatgccatgaacccactgatgca 460 ||||| || | | ||||| ||| || || ||||||||||| Sbjct: 782 cgtggtggtgcaacgtcgagtgcaataaagccactgatgca 742
>emb|AJ586914.1| Physcomitrella patens mRNA for putative vacuolar aspartic proteinase (ORF1) Length = 1940 Score = 42.1 bits (21), Expect = 2.5 Identities = 57/69 (82%) Strand = Plus / Minus Query: 640 gctcctttgttttgttctcacggagctggttctctatccacacaacagccatctcacagg 699 |||| |||||| |||||| || ||||||||||| ||||||||||||||| |||| Sbjct: 1562 gctcttttgttctgttctgactgagctggttctgggcccacacaacagccattccacata 1503 Query: 700 ctgtgcaca 708 ||||||||| Sbjct: 1502 ctgtgcaca 1494
>gb|AC133519.3| Mus musculus BAC clone RP23-178N8 from chromosome 5, complete sequence Length = 219269 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 104 ctccattcttcattacacagcaaca 128 ||||||||| ||||||||||||||| Sbjct: 4711 ctccattctccattacacagcaaca 4687
>emb|BX323819.9| Zebrafish DNA sequence from clone CH211-132F19 in linkage group 17, complete sequence Length = 178951 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 tttaagaaagaaataaaaggt 209 ||||||||||||||||||||| Sbjct: 91241 tttaagaaagaaataaaaggt 91261
>dbj|AP004943.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT38E13, TM0115, complete sequence Length = 95582 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 tttacaaatacaacaaacctt 53 ||||||||||||||||||||| Sbjct: 27421 tttacaaatacaacaaacctt 27441
>gb|J01252.1|NEUTRP1 n.crassa trifunctional tryptophan biosynthesis gene trp-1 Length = 2750 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 688 ccatctcacaggctgtgcacatgag 712 ||||||| ||||||||||||||||| Sbjct: 1980 ccatctcccaggctgtgcacatgag 2004
>gb|AC110520.12| Mus musculus chromosome 7, clone RP23-24N16, complete sequence Length = 248540 Score = 40.1 bits (20), Expect = 9.7 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 256 ggctcccatg-tctgaagatgcacaaac 282 |||||||||| ||||||||||||||||| Sbjct: 226218 ggctcccatgatctgaagatgcacaaac 226191
>gb|AY541455.1| Helianthus annuus haplotype 5 acetohydroxyacid synthase 1 (AHAS1) gene, complete cds Length = 1959 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 tttacaaatacaacaaacct 52 |||||||||||||||||||| Sbjct: 1430 tttacaaatacaacaaacct 1449
>gb|AY541454.1| Helianthus annuus haplotype 4 acetohydroxyacid synthase 1 (AHAS1) gene, complete cds Length = 1959 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 tttacaaatacaacaaacct 52 |||||||||||||||||||| Sbjct: 1430 tttacaaatacaacaaacct 1449
>gb|AY541453.1| Helianthus annuus haplotype 3 acetohydroxyacid synthase 1 (AHAS1) gene, complete cds Length = 1977 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 tttacaaatacaacaaacct 52 |||||||||||||||||||| Sbjct: 1448 tttacaaatacaacaaacct 1467
>gb|AY541452.1| Helianthus annuus haplotype 2 acetohydroxyacid synthase 1 (AHAS1) gene, complete cds Length = 1965 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 tttacaaatacaacaaacct 52 |||||||||||||||||||| Sbjct: 1436 tttacaaatacaacaaacct 1455
>gb|AY541451.1| Helianthus annuus haplotype 1 acetohydroxyacid synthase 1 (AHAS1) gene, complete cds Length = 1968 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 tttacaaatacaacaaacct 52 |||||||||||||||||||| Sbjct: 1439 tttacaaatacaacaaacct 1458
>gb|BT017963.1| Zea mays clone EL01N0523D02.c mRNA sequence Length = 1169 Score = 40.1 bits (20), Expect = 9.7 Identities = 38/44 (86%) Strand = Plus / Minus Query: 666 tggttctctatccacacaacagccatctcacaggctgtgcacat 709 ||||||| ||||| || ||||||||||||||||| ||||||| Sbjct: 532 tggttctgcatccataccacagccatctcacaggcattgcacat 489
>gb|AC124830.8| Mus musculus chromosome 17, clone RP24-165B21, complete sequence Length = 176889 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 389 gaagacatccccgagaatccagag 412 ||||||||||||||| |||||||| Sbjct: 49852 gaagacatccccgaggatccagag 49875
>gb|BC071022.1| Xenopus laevis hypothetical protein LOC432090, mRNA (cDNA clone IMAGE:4030481), partial cds Length = 1955 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 tacaaaccatgtgttgcctatttg 79 ||||||||||||||||||| |||| Sbjct: 1337 tacaaaccatgtgttgcctttttg 1360
>gb|AC131335.11| Mus musculus chromosome 8, clone RP23-32D9, complete sequence Length = 190133 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ttgcctatttgctctcactt 88 |||||||||||||||||||| Sbjct: 65004 ttgcctatttgctctcactt 65023
>gb|AC147663.3| Pan troglodytes BAC clone CH251-304A22 from Y, complete sequence Length = 162854 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 tattattgaattgattgcta 20 |||||||||||||||||||| Sbjct: 66518 tattattgaattgattgcta 66499
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 ttctctcttttgtttcagct 228 |||||||||||||||||||| Sbjct: 1632448 ttctctcttttgtttcagct 1632467
>gb|AC122206.4| Mus musculus BAC clone RP23-77G15 from 8, complete sequence Length = 204149 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 565 catggcagctgactgttgactctc 588 |||||| ||||||||||||||||| Sbjct: 56150 catggcggctgactgttgactctc 56127
>gb|AC142354.3| Pan troglodytes BAC clone RP43-21M11 from Y, complete sequence Length = 163480 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 tattattgaattgattgcta 20 |||||||||||||||||||| Sbjct: 18230 tattattgaattgattgcta 18211
>gb|AC149637.11| Medicago truncatula clone mth2-181h2, complete sequence Length = 116616 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 cttttgtttcagctttttta 234 |||||||||||||||||||| Sbjct: 63445 cttttgtttcagctttttta 63426
>gb|AC150845.11| Medicago truncatula clone mth2-150a2, complete sequence Length = 131577 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 catgtctgaagatgcacaaa 281 |||||||||||||||||||| Sbjct: 104212 catgtctgaagatgcacaaa 104193
>emb|AL356387.16| Human DNA sequence from clone RP5-1125M8 on chromosome 1p13.1-13.3 Contains the 3' end of the gene for eosinophil chemotactic cytokine (CHIA), a novel gene, a novel gene, a Glycosyl hydrolase faimily 18 pseudogene, a likely ortholog of mouse hypoxia induced gene 1 (HIG1) pseudogene, a progastricsin (pepsinogen C) (PGC) pseudogene and a CpG island, complete sequence Length = 91569 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 389 gaagacatccccgagaatccagag 412 |||||||||||| ||||||||||| Sbjct: 71690 gaagacatcccccagaatccagag 71713
>emb|AL354873.19| Human DNA sequence from clone RP11-108K1 on chromosome 10 Contains a peptidylprolyl isomerase A (cyclophilin A) (PPIA) pseudogene, the 5' end of the ABLIM1 gene for actin binding LIM protein 1 and a CpG island, complete sequence Length = 187344 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 tttattcttggtttaagaaagaaa 201 |||||||||||||||| ||||||| Sbjct: 138601 tttattcttggtttaaaaaagaaa 138578
>emb|AL078462.9|HSJ159G19 Human DNA sequence from clone RP1-159G19 on chromosome 6q14.1-14.3 Contains the 3' part of a novel gene, complete sequence Length = 88509 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 ccattcttcattacacagca 125 |||||||||||||||||||| Sbjct: 75097 ccattcttcattacacagca 75078
>gb|AC160464.3| Mus musculus chromosome 7, clone RP23-256J14, complete sequence Length = 175716 Score = 40.1 bits (20), Expect = 9.7 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 256 ggctcccatg-tctgaagatgcacaaac 282 |||||||||| ||||||||||||||||| Sbjct: 159000 ggctcccatgatctgaagatgcacaaac 159027
>gb|AC099739.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1528D07, complete sequence Length = 87592 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 ttctctcttttgtttcagct 228 |||||||||||||||||||| Sbjct: 39894 ttctctcttttgtttcagct 39913
>gb|AC159821.2| Mus musculus BAC clone RP23-152A3 from chromosome 9, complete sequence Length = 221672 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 182 ttcttggtttaagaaagaaataaaaggt 209 |||||| ||||||||| ||||||||||| Sbjct: 167984 ttcttgatttaagaaaaaaataaaaggt 167957
>emb|BX571678.14| Zebrafish DNA sequence from clone DKEY-271J15 in linkage group 16, complete sequence Length = 252671 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 cttttgtttcagctttttta 234 |||||||||||||||||||| Sbjct: 55958 cttttgtttcagctttttta 55977
>gb|BC099409.1| Mus musculus progastricsin (pepsinogen C), mRNA (cDNA clone MGC:117575 IMAGE:30790663), complete cds Length = 1407 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 389 gaagacatccccgagaatccagag 412 ||||||||||||||| |||||||| Sbjct: 1168 gaagacatccccgaggatccagag 1145
>ref|NM_204877.1| Gallus gallus progastricsin (pepsinogen C) (PGC), mRNA Length = 1339 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 389 gaagacatccccgagaatccagag 412 |||||||||||| ||||||||||| Sbjct: 1123 gaagacatccccaagaatccagag 1100
>gb|AC154324.2| Mus musculus BAC clone RP24-494E12 from chromosome 14, complete sequence Length = 198197 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 tttaagaaagaaataaaagg 208 |||||||||||||||||||| Sbjct: 63294 tttaagaaagaaataaaagg 63275
>emb|BX321906.30| Zebrafish DNA sequence from clone DKEYP-45E9 in linkage group 10, complete sequence Length = 164266 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 ttaagaaagaaataaaaggt 209 |||||||||||||||||||| Sbjct: 93198 ttaagaaagaaataaaaggt 93179
>dbj|BS000588.2| Pan troglodytes chromosome Y clone:PTB-443K18, complete sequence Length = 151892 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 tattattgaattgattgcta 20 |||||||||||||||||||| Sbjct: 52206 tattattgaattgattgcta 52225
>emb|BX324121.9| Zebrafish DNA sequence from clone DKEY-164J20 in linkage group 25, complete sequence Length = 181165 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 cttttgtttcagctttttta 234 |||||||||||||||||||| Sbjct: 128820 cttttgtttcagctttttta 128839
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 tattattgaattgattgcta 20 |||||||||||||||||||| Sbjct: 17169710 tattattgaattgattgcta 17169691
>gb|U61396.2| Vigna unguiculata aspartic proteinase mRNA, complete cds Length = 1842 Score = 40.1 bits (20), Expect = 9.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 384 cccatgaagacatccccgagaatccagagagg 415 ||||||||||| ||||| || ||||||||||| Sbjct: 1604 cccatgaagacgtccccaaggatccagagagg 1573
>gb|AC182231.2| Mus musculus BAC clone RP23-356C18 from chromosome 8, complete sequence Length = 206310 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ttgcctatttgctctcactt 88 |||||||||||||||||||| Sbjct: 194642 ttgcctatttgctctcactt 194661
>gb|BC097578.1| Xenopus laevis hypothetical protein LOC432090, mRNA (cDNA clone MGC:114780 IMAGE:4031162), complete cds Length = 3093 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 tacaaaccatgtgttgcctatttg 79 ||||||||||||||||||| |||| Sbjct: 1331 tacaaaccatgtgttgcctttttg 1354
>gb|AC144426.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1015F07, complete sequence Length = 127098 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 ttctctcttttgtttcagct 228 |||||||||||||||||||| Sbjct: 112009 ttctctcttttgtttcagct 112028
>dbj|AK008959.1| Mus musculus adult male stomach cDNA, RIKEN full-length enriched library, clone:2210416O16 product:GASTRICSIN PRECURSOR (EC 3.4.23.3) (PEPSINOGEN C) homolog [Rattus norvegicus], full insert sequence Length = 1385 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 389 gaagacatccccgagaatccagag 412 ||||||||||||||| |||||||| Sbjct: 1178 gaagacatccccgaggatccagag 1155
>dbj|AK008886.1| Mus musculus adult male stomach cDNA, RIKEN full-length enriched library, clone:2210410L06 product:GASTRICSIN PRECURSOR (EC 3.4.23.3) (PEPSINOGEN C) homolog [Rattus norvegicus], full insert sequence Length = 1388 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 389 gaagacatccccgagaatccagag 412 ||||||||||||||| |||||||| Sbjct: 1178 gaagacatccccgaggatccagag 1155
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 ttctctcttttgtttcagct 228 |||||||||||||||||||| Sbjct: 1632446 ttctctcttttgtttcagct 1632465
>emb|BX640592.10| Zebrafish DNA sequence from clone CH211-132E23 in linkage group 4, complete sequence Length = 186123 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 ttaagaaagaaataaaaggt 209 |||||||||||||||||||| Sbjct: 120269 ttaagaaagaaataaaaggt 120288
>gb|AC002978.1| Homo sapiens 12 PAC P336P3 (Research Park Cancer Institute Human Genome PAC library) complete sequence Length = 102591 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 684 acagccatctcacaggctgt 703 |||||||||||||||||||| Sbjct: 84439 acagccatctcacaggctgt 84458
>gb|AC016678.4|AC016678 Homo sapiens BAC clone RP11-55O11 from Y, complete sequence Length = 142982 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 tattattgaattgattgcta 20 |||||||||||||||||||| Sbjct: 100383 tattattgaattgattgcta 100402
>gb|AC142168.3| Mus musculus BAC clone RP24-80B23 from chromosome 9, complete sequence Length = 173152 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 182 ttcttggtttaagaaagaaataaaaggt 209 |||||| ||||||||| ||||||||||| Sbjct: 84307 ttcttgatttaagaaaaaaataaaaggt 84280
>dbj|BS000573.1| Pan troglodytes chromosome Y clone:RP43-021M11, complete sequences Length = 163477 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 tattattgaattgattgcta 20 |||||||||||||||||||| Sbjct: 145248 tattattgaattgattgcta 145267
>dbj|AB013396.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MTI20 Length = 79676 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 tctctcttttgtttcagctttttt 233 ||||||||||||||| |||||||| Sbjct: 25012 tctctcttttgtttctgctttttt 25035
>gb|AY112455.1| Zea mays CL6331_1 mRNA sequence Length = 1071 Score = 40.1 bits (20), Expect = 9.7 Identities = 38/44 (86%) Strand = Plus / Minus Query: 666 tggttctctatccacacaacagccatctcacaggctgtgcacat 709 ||||||| ||||| || ||||||||||||||||| ||||||| Sbjct: 437 tggttctgcatccataccacagccatctcacaggcattgcacat 394
>emb|AM233362.1| Francisella tularensis subsp. holarctica strain LVS complete genome Length = 1895994 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 tcttttgtttcagctttttt 233 |||||||||||||||||||| Sbjct: 1517033 tcttttgtttcagctttttt 1517052
>emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4 complete genome Length = 1892819 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 tcttttgtttcagctttttt 233 |||||||||||||||||||| Sbjct: 493026 tcttttgtttcagctttttt 493007
>gb|AC164569.3| Gallus gallus BAC clone CH261-138K23 from chromosome unknown, complete sequence Length = 248284 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 389 gaagacatccccgagaatccagag 412 |||||||||||| ||||||||||| Sbjct: 123199 gaagacatccccaagaatccagag 123176
>emb|AL953857.7| Zebrafish DNA sequence from clone CH211-127M7, complete sequence Length = 175586 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 cttttgtttcagctttttta 234 |||||||||||||||||||| Sbjct: 166753 cttttgtttcagctttttta 166772
>gb|AC004558.1|AC004558 Homo sapiens chromosome 19, overlapping cosmids F20014 and F8998, complete sequence Length = 82453 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 68 gttgcctatttgctctcacttctc 91 ||||| |||||||||||||||||| Sbjct: 15139 gttgcttatttgctctcacttctc 15162
>ref|NM_025973.2| Mus musculus progastricsin (pepsinogen C) (Pgc), mRNA Length = 1385 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 389 gaagacatccccgagaatccagag 412 ||||||||||||||| |||||||| Sbjct: 1178 gaagacatccccgaggatccagag 1155
>gb|AY871911.1| Synthetic construct hypothetical protein (FTT0475) gene, complete cds Length = 1224 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 tcttttgtttcagctttttt 233 |||||||||||||||||||| Sbjct: 467 tcttttgtttcagctttttt 448
>emb|AL831727.6| Mouse DNA sequence from clone RP23-210M20 on chromosome 4, complete sequence Length = 176930 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 gcagctgactgttgactctc 588 |||||||||||||||||||| Sbjct: 88148 gcagctgactgttgactctc 88167
>emb|AL671893.7| Mouse DNA sequence from clone RP23-170G19 on chromosome X, complete sequence Length = 175057 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 aggttctctcttttgtttca 225 |||||||||||||||||||| Sbjct: 155234 aggttctctcttttgtttca 155253
>dbj|AB025284.1| Gallus gallus cPgC gene for pepsinogen C, complete cds Length = 5076 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 389 gaagacatccccgagaatccagag 412 |||||||||||| ||||||||||| Sbjct: 4857 gaagacatccccaagaatccagag 4834
>dbj|AB025282.1| Gallus gallus cPgC mRNA for pepsinogen C, complete cds Length = 1339 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 389 gaagacatccccgagaatccagag 412 |||||||||||| ||||||||||| Sbjct: 1123 gaagacatccccaagaatccagag 1100
>dbj|AB025359.2| Helianthus annuus mRNA for aspartic proteinase, complete cds Length = 1722 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 675 atccacacaacagccatctcacag 698 ||||| |||||||||||||||||| Sbjct: 1194 atccaaacaacagccatctcacag 1171
>dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, clone:P0043E01 Length = 154128 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 ttctctcttttgtttcagct 228 |||||||||||||||||||| Sbjct: 44911 ttctctcttttgtttcagct 44930 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,674,088 Number of Sequences: 3902068 Number of extensions: 7674088 Number of successful extensions: 153235 Number of sequences better than 10.0: 122 Number of HSP's better than 10.0 without gapping: 120 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 152689 Number of HSP's gapped (non-prelim): 533 length of query: 712 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 689 effective length of database: 17,143,297,704 effective search space: 11811732118056 effective search space used: 11811732118056 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
