ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal7d23 |
|---|---|
| Clone Library Name | barley_pub |
>AMY2_HORVU (P04063) Alpha-amylase type B isozyme precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) (AMY2-2) (High pI alpha-amylase) Length = 427 Score = 104 bits (259), Expect(3) = 7e-24 Identities = 54/114 (47%), Positives = 76/114 (66%), Gaps = 5/114 (4%) Frame = -2 Query: 630 GSTQGHWRFPYGMEMQGYVYILTHPGTPAVFYDHIFS-HLQQDIAKLISIRQRLKIQCRS 454 GSTQ W FP MQGY YILTHPGTP +FYDH F L+++I +L+S+R R I S Sbjct: 315 GSTQHMWPFPSDRVMQGYAYILTHPGTPCIFYDHFFDWGLKEEIDRLVSVRTRHGIHNES 374 Query: 453 KIKIIKAEQNLYAAQINENLMMKIGS----GHFEPSGPINWIVAAEGHDYKIWE 304 K++II+A+ +LY A+I+ +++K+G G+ P G + VAA G+DY +WE Sbjct: 375 KLQIIEADADLYLAEIDGKVIVKLGPRYDVGNLIPGG---FKVAAHGNDYAVWE 425 Score = 24.3 bits (51), Expect(3) = 7e-24 Identities = 8/10 (80%), Positives = 10/10 (100%) Frame = -1 Query: 658 VTFIENHDTG 629 VTF++NHDTG Sbjct: 306 VTFVDNHDTG 315 Score = 21.9 bits (45), Expect(3) = 7e-24 Identities = 5/9 (55%), Positives = 9/9 (100%) Frame = -3 Query: 686 VLGWWPSRA 660 ++GWWP++A Sbjct: 297 MIGWWPAKA 305
>AMY6_HORVU (P04750) Alpha-amylase type B isozyme precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) (Clones GRAMY56 and 963) Length = 429 Score = 103 bits (257), Expect(3) = 1e-23 Identities = 53/114 (46%), Positives = 73/114 (64%), Gaps = 5/114 (4%) Frame = -2 Query: 630 GSTQGHWRFPYGMEMQGYVYILTHPGTPAVFYDHIFS-HLQQDIAKLISIRQRLKIQCRS 454 GSTQ W FP MQGY YILTHPG P +FYDH F L+++I +L+SIR R I S Sbjct: 317 GSTQHMWPFPSDRVMQGYAYILTHPGNPCIFYDHFFDWGLKEEIDRLVSIRTRQGIHSES 376 Query: 453 KIKIIKAEQNLYAAQINENLMMKIGS----GHFEPSGPINWIVAAEGHDYKIWE 304 K++I++A+ +LY A+I +++K+G GH P G + V A G+DY +WE Sbjct: 377 KLQIMEADADLYLAEIEGKVIVKLGPRYDVGHLIPEG---FKVVAHGNDYAVWE 427 Score = 24.3 bits (51), Expect(3) = 1e-23 Identities = 8/10 (80%), Positives = 10/10 (100%) Frame = -1 Query: 658 VTFIENHDTG 629 VTF++NHDTG Sbjct: 308 VTFVDNHDTG 317 Score = 21.9 bits (45), Expect(3) = 1e-23 Identities = 5/9 (55%), Positives = 9/9 (100%) Frame = -3 Query: 686 VLGWWPSRA 660 ++GWWP++A Sbjct: 299 MIGWWPAKA 307
>AMYA_VIGMU (P17859) Alpha-amylase precursor (EC 3.2.1.1) (1,4-alpha-D-glucan| glucanohydrolase) Length = 421 Score = 104 bits (260), Expect(2) = 1e-23 Identities = 58/114 (50%), Positives = 73/114 (64%), Gaps = 5/114 (4%) Frame = -2 Query: 630 GSTQGHWRFPYGMEMQGYVYILTHPGTPAVFYDHIFS-HLQQDIAKLISIRQRLKIQCRS 454 GSTQ W FP MQGY YILTHPGTP++FYDH F L++ IAKL SIR R I +S Sbjct: 311 GSTQRLWPFPSDKVMQGYAYILTHPGTPSIFYDHFFDWGLKEQIAKLSSIRLRNGINEKS 370 Query: 453 KIKIIKAEQNLYAAQINENLMMKIGS----GHFEPSGPINWIVAAEGHDYKIWE 304 +KI+ +E +LY A+I+ +M+KIG G+ PS N VA G DY +WE Sbjct: 371 TVKIMASEGDLYVAKIDNKIMVKIGPKMDLGNLIPS---NLHVATSGQDYAVWE 421 Score = 24.6 bits (52), Expect(2) = 1e-23 Identities = 9/10 (90%), Positives = 10/10 (100%) Frame = -1 Query: 658 VTFIENHDTG 629 VTFI+NHDTG Sbjct: 302 VTFIDNHDTG 311
>AM3E_ORYSA (P27934) Alpha-amylase isozyme 3E precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) Length = 437 Score = 100 bits (250), Expect(2) = 3e-22 Identities = 52/112 (46%), Positives = 70/112 (62%), Gaps = 3/112 (2%) Frame = -2 Query: 630 GSTQGHWRFPYGMEMQGYVYILTHPGTPAVFYDHIFS-HLQQDIAKLISIRQRLKIQCRS 454 GSTQ W FP MQGY YILTHPG P +FYDH+F +LQ +IA L IR R I S Sbjct: 314 GSTQSLWPFPSDKVMQGYAYILTHPGIPCIFYDHVFDWNLQHEIATLAEIRSRNGIHAES 373 Query: 453 KIKIIKAEQNLYAAQINENLMMKIGSGHFEPSG--PINWIVAAEGHDYKIWE 304 + I+KAE ++Y A I+ ++ K+G ++ G P ++ V A G+DY +WE Sbjct: 374 TLDILKAEGDIYVAMIDGKVITKLGP-RYDAGGIIPSDFHVVAHGNDYCVWE 424 Score = 24.3 bits (51), Expect(2) = 3e-22 Identities = 8/10 (80%), Positives = 10/10 (100%) Frame = -1 Query: 658 VTFIENHDTG 629 VTF++NHDTG Sbjct: 305 VTFVDNHDTG 314
>AMC2_ORYSA (P27941) Alpha-amylase isozyme C2 precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) Length = 445 Score = 97.1 bits (240), Expect(3) = 4e-22 Identities = 50/111 (45%), Positives = 70/111 (63%), Gaps = 2/111 (1%) Frame = -2 Query: 630 GSTQGHWRFPYGMEMQGYVYILTHPGTPAVFYDHIFS-HLQQDIAKLISIRQRLKIQCRS 454 GSTQ W FP MQGY YILTHPG P +FYDH F L++ IA L+++RQR + S Sbjct: 316 GSTQQMWPFPSDKVMQGYAYILTHPGNPCIFYDHFFDWGLKEQIAALVAVRQRNGVTATS 375 Query: 453 KIKIIKAEQNLYAAQINENLMMKIGSGHFEPS-GPINWIVAAEGHDYKIWE 304 +KI+ + + Y A+I+ ++MKIGS + S P + +AA G+ Y +WE Sbjct: 376 SLKIMLHDADAYVAEIDGKVVMKIGSRYDVSSLIPPGFHLAAHGNGYAVWE 426 Score = 24.3 bits (51), Expect(3) = 4e-22 Identities = 8/10 (80%), Positives = 10/10 (100%) Frame = -1 Query: 658 VTFIENHDTG 629 VTF++NHDTG Sbjct: 307 VTFVDNHDTG 316 Score = 23.1 bits (48), Expect(3) = 4e-22 Identities = 6/9 (66%), Positives = 9/9 (100%) Frame = -3 Query: 686 VLGWWPSRA 660 V+GWWP++A Sbjct: 298 VIGWWPAKA 306
>AM2A_ORYSA (P27935) Alpha-amylase isozyme 2A precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) Length = 445 Score = 97.1 bits (240), Expect(3) = 4e-22 Identities = 50/111 (45%), Positives = 70/111 (63%), Gaps = 2/111 (1%) Frame = -2 Query: 630 GSTQGHWRFPYGMEMQGYVYILTHPGTPAVFYDHIFS-HLQQDIAKLISIRQRLKIQCRS 454 GSTQ W FP MQGY YILTHPG P +FYDH F L++ IA L+++RQR + S Sbjct: 316 GSTQQMWPFPSDKVMQGYAYILTHPGNPCIFYDHFFDWGLKEQIAALVAVRQRNGVTATS 375 Query: 453 KIKIIKAEQNLYAAQINENLMMKIGSGHFEPS-GPINWIVAAEGHDYKIWE 304 +KI+ + + Y A+I+ ++MKIGS + S P + +AA G+ Y +WE Sbjct: 376 SLKIMLHDADAYVAEIDGKVVMKIGSRYDVSSLIPPGFHLAAHGNGYAVWE 426 Score = 24.3 bits (51), Expect(3) = 4e-22 Identities = 8/10 (80%), Positives = 10/10 (100%) Frame = -1 Query: 658 VTFIENHDTG 629 VTF++NHDTG Sbjct: 307 VTFVDNHDTG 316 Score = 23.1 bits (48), Expect(3) = 4e-22 Identities = 6/9 (66%), Positives = 9/9 (100%) Frame = -3 Query: 686 VLGWWPSRA 660 V+GWWP++A Sbjct: 298 VIGWWPAKA 306
>AMY1_HORVU (P00693) Alpha-amylase type A isozyme precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) (AMY1) (Low pI alpha-amylase) Length = 438 Score = 97.4 bits (241), Expect(3) = 7e-22 Identities = 49/111 (44%), Positives = 70/111 (63%), Gaps = 2/111 (1%) Frame = -2 Query: 630 GSTQGHWRFPYGMEMQGYVYILTHPGTPAVFYDHIFS-HLQQDIAKLISIRQRLKIQCRS 454 GSTQ W FP MQGY YILTHPG P +FYDH F+ + IA L++IR+R I S Sbjct: 317 GSTQAMWPFPSDKVMQGYAYILTHPGIPCIFYDHFFNWGFKDQIAALVAIRKRNGITATS 376 Query: 453 KIKIIKAEQNLYAAQINENLMMKIGSGHFEPSG-PINWIVAAEGHDYKIWE 304 +KI+ E + Y A+I+ +++KIGS + + P ++ +A G+DY +WE Sbjct: 377 ALKILMHEGDAYVAEIDGKVVVKIGSRYDVGAVIPAGFVTSAHGNDYAVWE 427 Score = 23.5 bits (49), Expect(3) = 7e-22 Identities = 6/10 (60%), Positives = 10/10 (100%) Frame = -3 Query: 686 VLGWWPSRAS 657 V+GWWP++A+ Sbjct: 299 VMGWWPAKAA 308 Score = 22.7 bits (47), Expect(3) = 7e-22 Identities = 7/9 (77%), Positives = 9/9 (100%) Frame = -1 Query: 655 TFIENHDTG 629 TF++NHDTG Sbjct: 309 TFVDNHDTG 317
>AM3D_ORYSA (P27933) Alpha-amylase isozyme 3D precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) Length = 436 Score = 99.0 bits (245), Expect(2) = 1e-21 Identities = 49/111 (44%), Positives = 71/111 (63%), Gaps = 2/111 (1%) Frame = -2 Query: 630 GSTQGHWRFPYGMEMQGYVYILTHPGTPAVFYDHIFS-HLQQDIAKLISIRQRLKIQCRS 454 GSTQ W FP MQGY YILTHPG P +FYDH+F +L+Q+I L +IR+R I S Sbjct: 314 GSTQKLWPFPSDKVMQGYAYILTHPGVPCIFYDHMFDWNLKQEITALAAIRERNGINAGS 373 Query: 453 KIKIIKAEQNLYAAQINENLMMKIGSGHFEPSG-PINWIVAAEGHDYKIWE 304 K++I+ A+ + Y A ++E +M+KIG+ + + P ++ G DY +WE Sbjct: 374 KLRIVVADADAYVAVVDEKVMVKIGTRYDVGNAVPSDFHQTVHGKDYSVWE 424 Score = 24.3 bits (51), Expect(2) = 1e-21 Identities = 8/10 (80%), Positives = 10/10 (100%) Frame = -1 Query: 658 VTFIENHDTG 629 VTF++NHDTG Sbjct: 305 VTFVDNHDTG 314
>AM3B_ORYSA (P27937) Alpha-amylase isozyme 3B precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) Length = 438 Score = 102 bits (254), Expect = 1e-21 Identities = 53/114 (46%), Positives = 76/114 (66%), Gaps = 5/114 (4%) Frame = -2 Query: 630 GSTQGHWRFPYGMEMQGYVYILTHPGTPAVFYDHIFS-HLQQDIAKLISIRQRLKIQCRS 454 GSTQ W FP MQGY YILTHPG P +FYDH+F +L+Q+I+ L ++R R +I S Sbjct: 315 GSTQNSWPFPSDKVMQGYAYILTHPGVPCIFYDHVFDWNLKQEISTLAAVRSRNEIHPGS 374 Query: 453 KIKIIKAEQNLYAAQINENLMMKIGS----GHFEPSGPINWIVAAEGHDYKIWE 304 K+KI+ AE ++Y A I++ ++ KIG+ G+ PS ++ V A G++Y IWE Sbjct: 375 KLKILAAEGDVYVAMIDDKVITKIGTRYDVGNLIPS---DFHVVAHGNNYCIWE 425
>AMY4_HORVU (P04748) Alpha-amylase type B isozyme (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) (Clone 103) (Fragment) Length = 153 Score = 95.9 bits (237), Expect(3) = 2e-21 Identities = 51/114 (44%), Positives = 73/114 (64%), Gaps = 5/114 (4%) Frame = -2 Query: 630 GSTQGHWRFPYGMEMQGYVYILTHPGTPAVFYDHIFS-HLQQDIAKLISIRQRLKIQCRS 454 GSTQ W FP MQGY YILTHP TP +FYDH F +++I +L+S+R R I S Sbjct: 41 GSTQHMWPFPSDRVMQGYAYILTHPRTPCIFYDHFFDWGPKEEIDRLVSVRTRHGIHNES 100 Query: 453 KIKIIKAEQNLYAAQINENLMMKIGS----GHFEPSGPINWIVAAEGHDYKIWE 304 K++II+A+ +LY A+I+ +++K+G G+ P G + AA G+DY +WE Sbjct: 101 KLQIIEADADLYLAEIDGKVIVKLGPRYDVGNLIPGG---FEGAAHGNDYAVWE 151 Score = 24.3 bits (51), Expect(3) = 2e-21 Identities = 8/10 (80%), Positives = 10/10 (100%) Frame = -1 Query: 658 VTFIENHDTG 629 VTF++NHDTG Sbjct: 32 VTFVDNHDTG 41 Score = 21.9 bits (45), Expect(3) = 2e-21 Identities = 5/9 (55%), Positives = 9/9 (100%) Frame = -3 Query: 686 VLGWWPSRA 660 ++GWWP++A Sbjct: 23 MIGWWPAKA 31
>AMY1_ORYSA (P17654) Alpha-amylase precursor (EC 3.2.1.1) (1,4-alpha-D-glucan| glucanohydrolase) (Isozyme 1B) Length = 434 Score = 96.7 bits (239), Expect(3) = 3e-21 Identities = 51/111 (45%), Positives = 70/111 (63%), Gaps = 2/111 (1%) Frame = -2 Query: 630 GSTQGHWRFPYGMEMQGYVYILTHPGTPAVFYDHIFS-HLQQDIAKLISIRQRLKIQCRS 454 GSTQ W FP MQGY YILTHPG P +FYDH F L+++I +L+SIR R I S Sbjct: 322 GSTQHLWPFPSDKVMQGYAYILTHPGNPCIFYDHFFDWGLKEEIERLVSIRNRQGIHPAS 381 Query: 453 KIKIIKAEQNLYAAQINENLMMKIGSGH-FEPSGPINWIVAAEGHDYKIWE 304 +++I++A+ +LY A+I+ ++ KIG + E P + V A G Y IWE Sbjct: 382 ELRIMEADSDLYLAEIDGKVITKIGPRYDVEHLIPEGFQVVAHGDGYAIWE 432 Score = 22.7 bits (47), Expect(3) = 3e-21 Identities = 7/9 (77%), Positives = 9/9 (100%) Frame = -1 Query: 655 TFIENHDTG 629 TF++NHDTG Sbjct: 314 TFVDNHDTG 322 Score = 22.3 bits (46), Expect(3) = 3e-21 Identities = 5/10 (50%), Positives = 10/10 (100%) Frame = -3 Query: 686 VLGWWPSRAS 657 ++GWWP++A+ Sbjct: 304 MIGWWPAKAT 313
>AMY3_WHEAT (P08117) Alpha-amylase AMY3 precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) Length = 413 Score = 96.7 bits (239), Expect(2) = 4e-21 Identities = 51/112 (45%), Positives = 70/112 (62%), Gaps = 3/112 (2%) Frame = -2 Query: 630 GSTQGHWRFPYGMEMQGYVYILTHPGTPAVFYDHIFS-HLQQDIAKLISIRQRLKIQCRS 454 GSTQ W FP MQGY YILTHPG P +FYDH+F L+Q+I L ++R R I S Sbjct: 298 GSTQRLWPFPSDKVMQGYAYILTHPGIPCIFYDHVFDWKLKQEITALATVRSRNGIHPGS 357 Query: 453 KIKIIKAEQNLYAAQINENLMMKIGSGHFEPSG--PINWIVAAEGHDYKIWE 304 + I+KAE +LY A+I ++ KIGS + P + +AA+G++Y +WE Sbjct: 358 TLDILKAEGDLYVAKIGGKVITKIGSRYNIGDNVIPSGFKIAAKGNNYCVWE 409 Score = 24.6 bits (52), Expect(2) = 4e-21 Identities = 9/10 (90%), Positives = 10/10 (100%) Frame = -1 Query: 658 VTFIENHDTG 629 VTFI+NHDTG Sbjct: 289 VTFIDNHDTG 298
>AM3A_ORYSA (P27932) Alpha-amylase isozyme 3A precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) Length = 440 Score = 95.5 bits (236), Expect(2) = 1e-20 Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 5/114 (4%) Frame = -2 Query: 630 GSTQGHWRFPYGMEMQGYVYILTHPGTPAVFYDHIFS-HLQQDIAKLISIRQRLKIQCRS 454 GSTQ W FP + GY YILTHPG P +FYDH+F +L+Q+I L + R+R I S Sbjct: 317 GSTQRMWPFPSDKVILGYAYILTHPGVPCIFYDHVFDWNLKQEINALAATRKRNGINAGS 376 Query: 453 KIKIIKAEQNLYAAQINENLMMKIGS----GHFEPSGPINWIVAAEGHDYKIWE 304 K++++ AE ++Y A ++E ++ KIG G+ PS ++ + A G+DY +WE Sbjct: 377 KLRVLAAESDMYVAMVDERVITKIGPRIDVGNIIPS---DFHIVAHGNDYCVWE 427 Score = 24.3 bits (51), Expect(2) = 1e-20 Identities = 8/10 (80%), Positives = 10/10 (100%) Frame = -1 Query: 658 VTFIENHDTG 629 VTF++NHDTG Sbjct: 308 VTFVDNHDTG 317
>AMY5_HORVU (P04749) Alpha-amylase type B isozyme (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) (Clone 168) (Fragment) Length = 135 Score = 93.6 bits (231), Expect(3) = 2e-20 Identities = 50/114 (43%), Positives = 72/114 (63%), Gaps = 5/114 (4%) Frame = -2 Query: 630 GSTQGHWRFPYGMEMQGYVYILTHPGTPAVFYDHIFS-HLQQDIAKLISIRQRLKIQCRS 454 GSTQ W FP MQGY YILTH GTP +FYDH F +++I +L+S+ R I S Sbjct: 23 GSTQHMWPFPSDRVMQGYAYILTHQGTPCIFYDHFFDWGPKEEIDRLVSVSTRHGIHSES 82 Query: 453 KIKIIKAEQNLYAAQINENLMMKIGS----GHFEPSGPINWIVAAEGHDYKIWE 304 K++II+A+ +L A+I+ +++K+G G+ P G + VAA G+DY +WE Sbjct: 83 KLQIIEADADLCLAEIDGKVIVKLGPRYDVGNLIPGG---FEVAAHGNDYAVWE 133 Score = 23.5 bits (49), Expect(3) = 2e-20 Identities = 8/10 (80%), Positives = 9/10 (90%) Frame = -1 Query: 658 VTFIENHDTG 629 VTF+ NHDTG Sbjct: 14 VTFVNNHDTG 23 Score = 21.9 bits (45), Expect(3) = 2e-20 Identities = 5/9 (55%), Positives = 9/9 (100%) Frame = -3 Query: 686 VLGWWPSRA 660 ++GWWP++A Sbjct: 5 MIGWWPAKA 13
>AM3C_ORYSA (P27939) Alpha-amylase isozyme 3C precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) Length = 437 Score = 97.8 bits (242), Expect = 3e-20 Identities = 50/114 (43%), Positives = 74/114 (64%), Gaps = 5/114 (4%) Frame = -2 Query: 630 GSTQGHWRFPYGMEMQGYVYILTHPGTPAVFYDHIFS-HLQQDIAKLISIRQRLKIQCRS 454 GSTQ W FP MQGY YILTHPG P +FYDH+F +L+Q+I+ L ++R R I S Sbjct: 315 GSTQNSWPFPSDKVMQGYAYILTHPGVPCIFYDHVFDWNLKQEISTLAAVRSRNGIHPGS 374 Query: 453 KIKIIKAEQNLYAAQINENLMMKIGS----GHFEPSGPINWIVAAEGHDYKIWE 304 K+ I+ A+ ++Y A I++ ++ KIG+ G+ PS ++ V A G++Y +WE Sbjct: 375 KLNILAADGDVYVAMIDDKVITKIGTRYDVGNLIPS---DFHVVAHGNNYCVWE 425
>AMY3_HORVU (P04747) Alpha-amylase type B isozyme precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) (Clone PHV19) (Fragment) Length = 368 Score = 67.0 bits (162), Expect(3) = 5e-13 Identities = 30/51 (58%), Positives = 37/51 (72%), Gaps = 1/51 (1%) Frame = -2 Query: 630 GSTQGHWRFPYGMEMQGYVYILTHPGTPAVFYDHIFS-HLQQDIAKLISIR 481 GSTQ W FP MQGY YILTHPGTP +FYDH F L+++I +L+S+R Sbjct: 315 GSTQHMWPFPSDRVMQGYAYILTHPGTPCIFYDHFFDWGLKEEIDRLVSVR 365 Score = 24.3 bits (51), Expect(3) = 5e-13 Identities = 8/10 (80%), Positives = 10/10 (100%) Frame = -1 Query: 658 VTFIENHDTG 629 VTF++NHDTG Sbjct: 306 VTFVDNHDTG 315 Score = 21.9 bits (45), Expect(3) = 5e-13 Identities = 5/9 (55%), Positives = 9/9 (100%) Frame = -3 Query: 686 VLGWWPSRA 660 ++GWWP++A Sbjct: 297 MIGWWPAKA 305
>AMT4_PSESA (P22963) Glucan 1,4-alpha-maltotetraohydrolase precursor (EC| 3.2.1.60) (G4-amylase) (Maltotetraose-forming amylase) (Exo-maltotetraohydrolase) (Maltotetraose-forming exo-amylase) Length = 551 Score = 51.6 bits (122), Expect(2) = 3e-08 Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 9/121 (7%) Frame = -2 Query: 636 TPGSTQG--HWRFPYGMEMQGYVYILTHPGTPAVFYDHIFSHLQQD-IAKLISIRQRLKI 466 +PG G HW G+ Q Y YILT PGTP V++ H++ D I +LI +R+ + Sbjct: 319 SPGQNGGQHHWALQDGLIRQAYAYILTSPGTPVVYWSHMYDWGYGDFIRQLIQVRRTAGV 378 Query: 465 QCRSKIKIIKAEQNLYA--AQINENLMMKIGSGHFEP----SGPINWIVAAEGHDYKIWE 304 + S I L A + + L++ + S P SG + V A ++W Sbjct: 379 RADSAISFHSGYSGLVATVSGSQQTLVVALNSDLANPGQVASGSFSEAVNASNGQVRVWR 438 Query: 303 A 301 + Sbjct: 439 S 439 Score = 26.2 bits (56), Expect(2) = 3e-08 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = -1 Query: 664 VPVTFIENHDTGLYSG 617 V VTF++NHDTG G Sbjct: 306 VAVTFVDNHDTGYSPG 321
>AMT4_PSEST (P13507) Glucan 1,4-alpha-maltotetraohydrolase precursor (EC| 3.2.1.60) (G4-amylase) (Maltotetraose-forming amylase) (Exo-maltotetraohydrolase) (Maltotetraose-forming exo-amylase) Length = 548 Score = 51.2 bits (121), Expect(2) = 3e-08 Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 9/121 (7%) Frame = -2 Query: 636 TPGSTQG--HWRFPYGMEMQGYVYILTHPGTPAVFYDHIFSHLQQD-IAKLISIRQRLKI 466 +PG G HW G+ Q Y YILT PGTP V++ H++ D I +LI +R+ + Sbjct: 319 SPGQNGGQHHWALQDGLIRQAYAYILTSPGTPVVYWSHMYDWGYGDFIRQLIQVRRAAGV 378 Query: 465 QCRSKIKIIKAEQNLYA--AQINENLMMKIGSGHFEP----SGPINWIVAAEGHDYKIWE 304 + S I L A + + L++ + S P SG + V A ++W Sbjct: 379 RADSAISFHSGYSGLVATVSGSQQTLVVALNSDLGNPGQVASGSFSEAVNASNGQVRVWR 438 Query: 303 A 301 + Sbjct: 439 S 439 Score = 26.2 bits (56), Expect(2) = 3e-08 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = -1 Query: 664 VPVTFIENHDTGLYSG 617 V VTF++NHDTG G Sbjct: 306 VAVTFVDNHDTGYSPG 321
>AMC1_ORYSA (P27940) Alpha-amylase isozyme C (EC 3.2.1.1) (1,4-alpha-D-glucan| glucanohydrolase) (Isozyme 1B) Length = 348 Score = 32.3 bits (72), Expect(3) = 0.008 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%) Frame = -2 Query: 555 GTPAVFYDHIFS-HLQQDIAKLISIRQR 475 G P +FYDH F L+ +I +L+SIR R Sbjct: 305 GNPCIFYDHFFDWGLKDEIERLVSIRNR 332 Score = 22.7 bits (47), Expect(3) = 0.008 Identities = 7/9 (77%), Positives = 9/9 (100%) Frame = -1 Query: 655 TFIENHDTG 629 TF++NHDTG Sbjct: 297 TFVDNHDTG 305 Score = 22.3 bits (46), Expect(3) = 0.008 Identities = 5/10 (50%), Positives = 10/10 (100%) Frame = -3 Query: 686 VLGWWPSRAS 657 ++GWWP++A+ Sbjct: 287 MIGWWPAKAT 296
>MDR20_ARATH (Q9LSJ5) Putative multidrug resistance protein 20 (P-glycoprotein 18)| Length = 1225 Score = 30.8 bits (68), Expect = 4.1 Identities = 22/75 (29%), Positives = 32/75 (42%) Frame = -2 Query: 540 FYDHIFSHLQQDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQINENLMMKIGSGHFEP 361 FYD + ++ D + S R R I ++ E L+A I EN+M S + Sbjct: 1031 FYDPLKGIVKIDGRDIRSCHLR---SLRQHIALVSQEPTLFAGTIRENIMYGGASNKIDE 1087 Query: 360 SGPINWIVAAEGHDY 316 S I AA HD+ Sbjct: 1088 SEIIEAAKAANAHDF 1102 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 98,823,453 Number of Sequences: 219361 Number of extensions: 1959734 Number of successful extensions: 4885 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 4697 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4866 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6825954960 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
