Clone Information

BLAST Search Result

Clone Name	rbaal19l01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PSBO_TOBAC (Q40459) Oxygen-evolving enhancer protein 1, chloropl...	270	3e-72
2	PSBO_FRIAG (O49079) Oxygen-evolving enhancer protein 1, chloropl...	269	6e-72
3	PSBO_LYCES (P23322) Oxygen-evolving enhancer protein 1, chloropl...	266	3e-71
4	PSBO_PEA (P14226) Oxygen-evolving enhancer protein 1, chloroplas...	263	4e-70
5	PSBO_WHEAT (P27665) Oxygen-evolving enhancer protein 1, chloropl...	261	9e-70
6	PSBO_SPIOL (P12359) Oxygen-evolving enhancer protein 1, chloropl...	261	2e-69
7	PSBO_SOLTU (P26320) Oxygen-evolving enhancer protein 1, chloropl...	260	2e-69
8	PSBO2_ARATH (Q9S841) Oxygen-evolving enhancer protein 1-2, chlor...	260	3e-69
9	PSBO1_ARATH (P23321) Oxygen-evolving enhancer protein 1-1, chlor...	258	1e-68
10	PSBO_CHLRE (P12853) Oxygen-evolving enhancer protein 1, chloropl...	198	1e-50
11	PSBO_EUGGR (P46483) Oxygen-evolving enhancer protein 1, chloropl...	196	6e-50
12	PSBO_VOLCA (Q9SBN6) Oxygen-evolving enhancer protein 1, chloropl...	196	6e-50
13	PSBO_ANASP (P13907) Photosystem II manganese-stabilizing polypep...	172	6e-43
14	PSBO_CYAA5 (Q9R6W6) Photosystem II manganese-stabilizing polypep...	158	1e-38
15	PSBO_SYNEN (P0A432) Photosystem II manganese-stabilizing polypep...	154	2e-37
16	PSBO_SYNEL (P0A431) Photosystem II manganese-stabilizing polypep...	154	2e-37
17	PSBO_SYNP7 (P11472) Photosystem II manganese-stabilizing polypep...	149	7e-36
18	PSBO_SYNY3 (P10549) Photosystem II manganese-stabilizing polypep...	147	3e-35
19	PSBO_PINPS (P81665) Oxygen-evolving enhancer protein 1 (OEE1) (3...	40	0.004
20	CH10_ENTFA (Q93EU7) 10 kDa chaperonin (Protein Cpn10) (groES pro...	34	0.31
21	MRT4_SCHPO (Q9USZ6) mRNA turnover protein 4 homolog	31	2.6
22	DP13B_MOUSE (Q8K3G9) DCC-interacting protein 13 beta (Dip13 beta...	31	3.5
23	RIC8B_HUMAN (Q9NVN3) Synembryn-B (Brain synembrin) (hSyn) (Prote...	30	4.5
24	RIC8B_MOUSE (Q80XE1) Synembryn-B (Protein Ric-8B)	30	4.5
25	METB_HERAU (P24601) Probable cystathionine gamma-synthase (EC 2....	30	5.9
26	MECR_RAT (Q9Z311) Trans-2-enoyl-CoA reductase, mitochondrial pre...	30	5.9
27	LEPA_PHOLL (Q7N1X3) GTP-binding protein lepA	30	7.7
28	H1_EUPES (Q9M5W4) Histone H1	30	7.7

>PSBO_TOBAC (Q40459) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 332

 Score =  270 bits (690), Expect = 3e-72
 Identities = 132/142 (92%), Positives = 137/142 (96%)
 Frame = -3

Query: 628 KDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGS 449
           KDGIDYAAVTVQLPGGERVPFLFT+KQLVA+GKPESFSG FLVPSYRGSSFLDPKGRGGS
Sbjct: 191 KDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGS 250

Query: 448 TGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSD 269
           TGYDNAVALPAGGRGDEEEL KENVKN SSSTG ITLSVT+SKPETGEVIGVFES+QPSD
Sbjct: 251 TGYDNAVALPAGGRGDEEELQKENVKNTSSSTGKITLSVTQSKPETGEVIGVFESIQPSD 310

Query: 268 TDLGAKAPKDVKIQGVWYAQLE 203
           TDLGAK PKDVKIQG+WYAQLE
Sbjct: 311 TDLGAKVPKDVKIQGIWYAQLE 332

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>PSBO_FRIAG (O49079) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 329

 Score =  269 bits (687), Expect = 6e-72
 Identities = 131/142 (92%), Positives = 137/142 (96%)
 Frame = -3

Query: 628 KDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGS 449
           KDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPESFSG +LVPSYRGSSFLDPKGRGGS
Sbjct: 188 KDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPESFSGSYLVPSYRGSSFLDPKGRGGS 247

Query: 448 TGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSD 269
            GYDNAVALPAGGRGDEEEL KEN+K+ SSSTG ITLSVTKSKPETGEVIGVFES+QPSD
Sbjct: 248 AGYDNAVALPAGGRGDEEELVKENIKDVSSSTGKITLSVTKSKPETGEVIGVFESIQPSD 307

Query: 268 TDLGAKAPKDVKIQGVWYAQLE 203
           TDLG+KAPKDVKIQG+WYAQLE
Sbjct: 308 TDLGSKAPKDVKIQGIWYAQLE 329

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>PSBO_LYCES (P23322) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 329

 Score =  266 bits (681), Expect = 3e-71
 Identities = 130/142 (91%), Positives = 136/142 (95%)
 Frame = -3

Query: 628 KDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGS 449
           KDGIDYAAVTVQLPGGERVPFLFT+KQLVA+GKPESFSG FLVPSYRGSSFLDPKGRGGS
Sbjct: 188 KDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGS 247

Query: 448 TGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSD 269
           TGYDNAVALPAGGRGDEEEL KENVKN +S TG ITLSVT+SKPETGEVIGVFES+QPSD
Sbjct: 248 TGYDNAVALPAGGRGDEEELQKENVKNTASLTGKITLSVTQSKPETGEVIGVFESIQPSD 307

Query: 268 TDLGAKAPKDVKIQGVWYAQLE 203
           TDLGAK PKDVKIQG+WYAQLE
Sbjct: 308 TDLGAKVPKDVKIQGIWYAQLE 329

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>PSBO_PEA (P14226) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 329

 Score =  263 bits (671), Expect = 4e-70
 Identities = 129/143 (90%), Positives = 137/143 (95%)
 Frame = -3

Query: 628 KDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGS 449
           KDGIDYAAVTVQLPGGERVPFLFT+KQLVA+GKP+SFSG FLVPSYRGSSFLDPKGRG S
Sbjct: 187 KDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPDSFSGEFLVPSYRGSSFLDPKGRGAS 246

Query: 448 TGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSD 269
           TGYDNAVALPAGGRGDEEEL KEN K+A+SS G ITLSVT++KPETGEVIGVFES+QPSD
Sbjct: 247 TGYDNAVALPAGGRGDEEELGKENNKSAASSKGKITLSVTQTKPETGEVIGVFESIQPSD 306

Query: 268 TDLGAKAPKDVKIQGVWYAQLES 200
           TDLGAKAPKDVKIQGVWYAQLES
Sbjct: 307 TDLGAKAPKDVKIQGVWYAQLES 329

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>PSBO_WHEAT (P27665) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 325

 Score =  261 bits (668), Expect = 9e-70
 Identities = 136/144 (94%), Positives = 137/144 (95%)
 Frame = -3

Query: 628 KDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGS 449
           KDGIDYAAVTVQLPGGERV FLFTVKQLVATGKPESF  PFLVPSYRGSSFLDPKGRGGS
Sbjct: 185 KDGIDYAAVTVQLPGGERVAFLFTVKQLVATGKPESFR-PFLVPSYRGSSFLDPKGRGGS 243

Query: 448 TGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSD 269
           TGYDNA ALP GGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSD
Sbjct: 244 TGYDNAGALPRGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSD 303

Query: 268 TDLGAKAPKDVKIQGVWYAQLESN 197
           TDL  +APKDVKIQGVWYAQLESN
Sbjct: 304 TDL--EAPKDVKIQGVWYAQLESN 325

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>PSBO_SPIOL (P12359) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 332

 Score =  261 bits (666), Expect = 2e-69
 Identities = 128/142 (90%), Positives = 134/142 (94%)
 Frame = -3

Query: 628 KDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGS 449
           KDGIDYAAVTVQLPGGERVPFLFT+KQLVA+GKPESFSG FLVPSYRGSSFLDPKGRGGS
Sbjct: 189 KDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPESFSGDFLVPSYRGSSFLDPKGRGGS 248

Query: 448 TGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSD 269
           TGYDNAVALPAGGRGDEEEL KEN KN +SS G ITLSVT SKPETGEVIGVF+S+QPSD
Sbjct: 249 TGYDNAVALPAGGRGDEEELQKENNKNVASSKGTITLSVTSSKPETGEVIGVFQSLQPSD 308

Query: 268 TDLGAKAPKDVKIQGVWYAQLE 203
           TDLGAK PKDVKI+GVWYAQLE
Sbjct: 309 TDLGAKVPKDVKIEGVWYAQLE 330

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>PSBO_SOLTU (P26320) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 333

 Score =  260 bits (665), Expect = 2e-69
 Identities = 127/143 (88%), Positives = 134/143 (93%)
 Frame = -3

Query: 628 KDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGS 449
           KDGIDYAAVTVQLPGGERVPFLFT+KQLVA+GKPESFS  FLVPSYRGSSFLDPKGRGGS
Sbjct: 191 KDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPESFSVDFLVPSYRGSSFLDPKGRGGS 250

Query: 448 TGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSD 269
           TGYDNAVALPAGGRGDEEEL KENVKN +S TG IT +VTKS P+TGEVIGVFES+QPSD
Sbjct: 251 TGYDNAVALPAGGRGDEEELQKENVKNTASLTGKITFTVTKSNPQTGEVIGVFESIQPSD 310

Query: 268 TDLGAKAPKDVKIQGVWYAQLES 200
           TDLGAK PKDVKIQG+WYAQLES
Sbjct: 311 TDLGAKTPKDVKIQGIWYAQLES 333

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>PSBO2_ARATH (Q9S841) Oxygen-evolving enhancer protein 1-2, chloroplast|
           precursor (OEE1) (33 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 33 kDa subunit) (33 kDa
           thylakoid membrane protein)
          Length = 331

 Score =  260 bits (664), Expect = 3e-69
 Identities = 126/142 (88%), Positives = 134/142 (94%)
 Frame = -3

Query: 628 KDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGS 449
           +DGIDYAAVTVQLPGGERVPFLFTVKQL A+GKPESFSG FLVPSYRGSSFLDPKGRGGS
Sbjct: 190 EDGIDYAAVTVQLPGGERVPFLFTVKQLEASGKPESFSGKFLVPSYRGSSFLDPKGRGGS 249

Query: 448 TGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSD 269
           TGYDNAVALPAGGRGDEEEL+KENVKN ++S G ITL +TKSKPETGEVIGVFES+QPSD
Sbjct: 250 TGYDNAVALPAGGRGDEEELSKENVKNTAASVGEITLKITKSKPETGEVIGVFESLQPSD 309

Query: 268 TDLGAKAPKDVKIQGVWYAQLE 203
           TDLGAK PKDVKIQGVWY Q+E
Sbjct: 310 TDLGAKVPKDVKIQGVWYGQIE 331

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>PSBO1_ARATH (P23321) Oxygen-evolving enhancer protein 1-1, chloroplast|
           precursor (OEE1) (33 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 33 kDa subunit) (33 kDa
           thylakoid membrane protein)
          Length = 332

 Score =  258 bits (659), Expect = 1e-68
 Identities = 126/142 (88%), Positives = 133/142 (93%)
 Frame = -3

Query: 628 KDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGS 449
           +DGIDYAAVTVQLPGGERVPFLFTVKQL A+GKP+SF+G FLVPSYRGSSFLDPKGRGGS
Sbjct: 191 EDGIDYAAVTVQLPGGERVPFLFTVKQLDASGKPDSFTGKFLVPSYRGSSFLDPKGRGGS 250

Query: 448 TGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSD 269
           TGYDNAVALPAGGRGDEEEL KENVKN ++S G ITL VTKSKPETGEVIGVFES+QPSD
Sbjct: 251 TGYDNAVALPAGGRGDEEELVKENVKNTAASVGEITLKVTKSKPETGEVIGVFESLQPSD 310

Query: 268 TDLGAKAPKDVKIQGVWYAQLE 203
           TDLGAK PKDVKIQGVWY QLE
Sbjct: 311 TDLGAKVPKDVKIQGVWYGQLE 332

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>PSBO_CHLRE (P12853) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1)
          Length = 291

 Score =  198 bits (504), Expect = 1e-50
 Identities = 99/141 (70%), Positives = 109/141 (77%)
 Frame = -3

Query: 625 DGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGST 446
           DGIDYAA TVQLPGGERV FLFT+KQ    G  +   G FLVPSYRGSSFLDPKGRGGST
Sbjct: 153 DGIDYAATTVQLPGGERVAFLFTIKQFDGKGTLDGIKGDFLVPSYRGSSFLDPKGRGGST 212

Query: 445 GYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDT 266
           GYDNAVALPA  R D EEL KENVK   +  G+   SV K  P TGE+ GVFES+QPSDT
Sbjct: 213 GYDNAVALPA--RADAEELLKENVKITKALKGSAVFSVAKVDPVTGEIAGVFESIQPSDT 270

Query: 265 DLGAKAPKDVKIQGVWYAQLE 203
           DLGAK PKD+K+ G+WYAQL+
Sbjct: 271 DLGAKPPKDIKVTGLWYAQLK 291

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>PSBO_EUGGR (P46483) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1)
          Length = 338

 Score =  196 bits (497), Expect = 6e-50
 Identities = 95/141 (67%), Positives = 110/141 (78%)
 Frame = -3

Query: 628 KDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGS 449
           KDG+DYAA TVQL GGERVPFLFT+K L+A G    F G F VPSYRG++FLDPKGRGG+
Sbjct: 196 KDGLDYAATTVQLAGGERVPFLFTIKNLLAKGDAGQFLGQFDVPSYRGATFLDPKGRGGA 255

Query: 448 TGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSD 269
           +GYD AVALPA   GD+EE AKEN K+ ++S G I   V K   ETGE+ GVFES+QPSD
Sbjct: 256 SGYDTAVALPAS--GDDEEYAKENSKSTAASVGTIAFKVAKVNAETGEIAGVFESIQPSD 313

Query: 268 TDLGAKAPKDVKIQGVWYAQL 206
           TDLGAK PKD+K  GVWYAQ+
Sbjct: 314 TDLGAKVPKDIKTSGVWYAQI 334

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>PSBO_VOLCA (Q9SBN6) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1)
          Length = 293

 Score =  196 bits (497), Expect = 6e-50
 Identities = 97/141 (68%), Positives = 109/141 (77%)
 Frame = -3

Query: 628 KDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGS 449
           +DGIDYAA TVQLPGGERV FLFT+KQ    G  ++  G F+VPSYRGSSFLDPKGRGGS
Sbjct: 153 EDGIDYAATTVQLPGGERVAFLFTIKQFDGKGTLDNIKGDFVVPSYRGSSFLDPKGRGGS 212

Query: 448 TGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSD 269
           TGYDNAVALPA  R D EEL KENVK+  +  G+   SV K    TGE+ GVFES+QPSD
Sbjct: 213 TGYDNAVALPA--RADAEELLKENVKSTKALKGSAVFSVAKVNTATGEIAGVFESIQPSD 270

Query: 268 TDLGAKAPKDVKIQGVWYAQL 206
           TDLGAK PKD+KI G+WY QL
Sbjct: 271 TDLGAKPPKDIKITGLWYGQL 291

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>PSBO_ANASP (P13907) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 273

 Score =  172 bits (437), Expect = 6e-43
 Identities = 87/150 (58%), Positives = 109/150 (72%), Gaps = 8/150 (5%)
 Frame = -3

Query: 628 KDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKP--------ESFSGPFLVPSYRGSSFL 473
           KDG+D+ A+TVQLPGGERVPFLFT+K LVA  +P          F G F VPSYRG++FL
Sbjct: 126 KDGLDFQAITVQLPGGERVPFLFTIKNLVAQTQPGLSSLNTSTDFEGTFKVPSYRGAAFL 185

Query: 472 DPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGV 293
           DPKGRG  +GYDNAVALPA  + D+E+L + NVK A    G I+L + K    +GE+ G 
Sbjct: 186 DPKGRGVVSGYDNAVALPA--QADDEDLTRTNVKRAEILNGKISLQIAKVDSSSGEIAGT 243

Query: 292 FESVQPSDTDLGAKAPKDVKIQGVWYAQLE 203
           FES QPSDTDLGA  PK+VKI+G++YA++E
Sbjct: 244 FESEQPSDTDLGADEPKEVKIRGIFYARVE 273

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>PSBO_CYAA5 (Q9R6W6) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 275

 Score =  158 bits (400), Expect = 1e-38
 Identities = 85/147 (57%), Positives = 104/147 (70%), Gaps = 8/147 (5%)
 Frame = -3

Query: 622 GIDYAAVTVQLPGGERVPFLFTVKQLVATGKPE--------SFSGPFLVPSYRGSSFLDP 467
           GID+  VTVQLPGGE+VPF FT+K LV   +P          F G F VPSYRG++FLDP
Sbjct: 129 GIDFQPVTVQLPGGEQVPFFFTIKNLVGKTEPGFSSINSSIDFEGDFRVPSYRGATFLDP 188

Query: 466 KGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFE 287
           KGRG +TGYDNAVALPA    D+E+ A  NVK      G+I+L VTK    TGE+ GVF+
Sbjct: 189 KGRGLATGYDNAVALPA--TADKEDYA--NVKQTPIGKGSISLQVTKVDQATGEIAGVFD 244

Query: 286 SVQPSDTDLGAKAPKDVKIQGVWYAQL 206
           S QPSDTDLGAK P +VKI+G++YA++
Sbjct: 245 SEQPSDTDLGAKEPVEVKIRGIFYARV 271

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>PSBO_SYNEN (P0A432) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 272

 Score =  154 bits (389), Expect = 2e-37
 Identities = 82/150 (54%), Positives = 104/150 (69%), Gaps = 8/150 (5%)
 Frame = -3

Query: 628 KDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPE--------SFSGPFLVPSYRGSSFL 473
           +DGID+  VTVQ+ GGER+P LFTVK LVA+ +P          F G F VPSYR ++FL
Sbjct: 124 EDGIDFQPVTVQMAGGERIPLLFTVKNLVASTQPNVTSITTSTDFKGEFNVPSYRTANFL 183

Query: 472 DPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGV 293
           DPKGRG ++GYD+A+ALP   +  EEELA+ NVK  S + G I+L+V K    TGE+ G 
Sbjct: 184 DPKGRGLASGYDSAIALP---QAKEEELARANVKRFSLTKGQISLNVAKVDGRTGEIAGT 240

Query: 292 FESVQPSDTDLGAKAPKDVKIQGVWYAQLE 203
           FES Q SD D+GA  P +VKIQGV+YA +E
Sbjct: 241 FESEQLSDDDMGAHEPHEVKIQGVFYASIE 270

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>PSBO_SYNEL (P0A431) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 272

 Score =  154 bits (389), Expect = 2e-37
 Identities = 82/150 (54%), Positives = 104/150 (69%), Gaps = 8/150 (5%)
 Frame = -3

Query: 628 KDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKPE--------SFSGPFLVPSYRGSSFL 473
           +DGID+  VTVQ+ GGER+P LFTVK LVA+ +P          F G F VPSYR ++FL
Sbjct: 124 EDGIDFQPVTVQMAGGERIPLLFTVKNLVASTQPNVTSITTSTDFKGEFNVPSYRTANFL 183

Query: 472 DPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGV 293
           DPKGRG ++GYD+A+ALP   +  EEELA+ NVK  S + G I+L+V K    TGE+ G 
Sbjct: 184 DPKGRGLASGYDSAIALP---QAKEEELARANVKRFSLTKGQISLNVAKVDGRTGEIAGT 240

Query: 292 FESVQPSDTDLGAKAPKDVKIQGVWYAQLE 203
           FES Q SD D+GA  P +VKIQGV+YA +E
Sbjct: 241 FESEQLSDDDMGAHEPHEVKIQGVFYASIE 270

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>PSBO_SYNP7 (P11472) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 277

 Score =  149 bits (376), Expect = 7e-36
 Identities = 81/150 (54%), Positives = 104/150 (69%), Gaps = 8/150 (5%)
 Frame = -3

Query: 628 KDGIDYAAVTVQLPGGERVPFLFTVKQLVA-TGKPES-------FSGPFLVPSYRGSSFL 473
           K GID+ A+TV LPGGE VPFLFTVK LVA T +P +         G + VPSYR S+FL
Sbjct: 126 KGGIDFQAITVLLPGGEEVPFLFTVKGLVASTSEPATSINTSTDLRGGYRVPSYRTSNFL 185

Query: 472 DPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGV 293
           DPK RG +TGY++AVA+P+ G  D E+L KENVK   +  G I+L+V+K    TGEV GV
Sbjct: 186 DPKARGLTTGYESAVAIPSAG--DAEDLTKENVKRFVTGQGEISLAVSKVDGATGEVAGV 243

Query: 292 FESVQPSDTDLGAKAPKDVKIQGVWYAQLE 203
           F ++QPSDTD+G K   DVK+ G +Y ++E
Sbjct: 244 FTAIQPSDTDMGGKEAVDVKLVGQFYGRIE 273

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>PSBO_SYNY3 (P10549) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 274

 Score =  147 bits (371), Expect = 3e-35
 Identities = 76/152 (50%), Positives = 97/152 (63%), Gaps = 8/152 (5%)
 Frame = -3

Query: 628 KDGIDYAAVTVQLPGGERVPFLFTVKQLVATGKP--------ESFSGPFLVPSYRGSSFL 473
           KDGID+  +TV LPGGE VPF FTVK    T +P          F G F VPSYRG+ FL
Sbjct: 127 KDGIDFQPITVLLPGGEEVPFFFTVKNFTGTTEPGFTSINSSTDFVGDFNVPSYRGAGFL 186

Query: 472 DPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGV 293
           DPK RG  TGYDNAVALP+       +  + N K      G ++L VT+    TGE+ G+
Sbjct: 187 DPKARGLYTGYDNAVALPSAA-----DKFRTNKKETPLGKGTLSLQVTQVDGSTGEIAGI 241

Query: 292 FESVQPSDTDLGAKAPKDVKIQGVWYAQLESN 197
           FES QPSDTDLGAK P DVK++G++Y +++++
Sbjct: 242 FESEQPSDTDLGAKEPLDVKVRGIFYGRVDTD 273

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>PSBO_PINPS (P81665) Oxygen-evolving enhancer protein 1 (OEE1) (33 kDa subunit|
           of oxygen evolving system of photosystem II) (33 kDa
           thylakoid membrane protein) (Fragments)
          Length = 26

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = -3

Query: 466 KGRGGSTGYDNAVALPAGGR 407
           + +GGSTGYDNAVALPAGGR
Sbjct: 7   QSKGGSTGYDNAVALPAGGR 26

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>CH10_ENTFA (Q93EU7) 10 kDa chaperonin (Protein Cpn10) (groES protein)|
          Length = 94

 Score = 34.3 bits (77), Expect = 0.31
 Identities = 23/54 (42%), Positives = 28/54 (51%)
 Frame = -3

Query: 391 LAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKI 230
           +AKE  K      G +  SV K KP+TGEVI V E       + G K P +VKI
Sbjct: 13  VAKEEEKTVG---GIVLASVAKEKPQTGEVIAVGEG---RVLENGTKVPMEVKI 60

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>MRT4_SCHPO (Q9USZ6) mRNA turnover protein 4 homolog|
          Length = 241

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 27/63 (42%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = -3

Query: 430 VALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFES-VQPSDTDLGA 254
           V   A G   EEE A+   K      G + L  T SKP+  EVIG FES VQ      GA
Sbjct: 72  VMAKALGHTPEEEHAENVSKLTKLLHGAVGLLFTNSKPD--EVIGYFESFVQNDFARAGA 129

Query: 253 KAP 245
            AP
Sbjct: 130 VAP 132

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>DP13B_MOUSE (Q8K3G9) DCC-interacting protein 13 beta (Dip13 beta) (Adapter|
           protein containing PH domain, PTB domain and leucine
           zipper motif 2)
          Length = 662

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -3

Query: 412 GRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQ 278
           G+  E   + +N+KN+     NI    T S PET E+I     +Q
Sbjct: 405 GKKQESSCSSQNIKNSDIEDDNIVPKATASIPETEELIAPGTPIQ 449

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>RIC8B_HUMAN (Q9NVN3) Synembryn-B (Brain synembrin) (hSyn) (Protein Ric-8B)|
          Length = 536

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
 Frame = -3

Query: 508 FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD-----EEELAKENVKNASSSTGNI 344
           F++   R  S L   G G + G   A  L AGGRGD     +E+   E  KNA  +   I
Sbjct: 429 FVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKPNINLI 488

Query: 343 TLSVTKSKP 317
           T  + +  P
Sbjct: 489 TGHLEEPMP 497

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>RIC8B_MOUSE (Q80XE1) Synembryn-B (Protein Ric-8B)|
          Length = 560

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
 Frame = -3

Query: 508 FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD-----EEELAKENVKNASSSTGNI 344
           F++   R  S L   G G + G   A  L AGGRGD     +E+   E  KNA  +   I
Sbjct: 429 FVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKPNINLI 488

Query: 343 TLSVTKSKP 317
           T  + +  P
Sbjct: 489 TGHLEEPMP 497

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>METB_HERAU (P24601) Probable cystathionine gamma-synthase (EC 2.5.1.48) (CGS)|
           (O-succinylhomoserine (thiol)-lyase) (Fragment)
          Length = 319

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -3

Query: 562 FTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYD 437
           F  + + A   PES +G  +VP Y+ S++   +G G  TGY+
Sbjct: 5   FATRAIHAGQDPESVTGAVIVPIYQTSTYAQ-RGVGDHTGYE 45

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>MECR_RAT (Q9Z311) Trans-2-enoyl-CoA reductase, mitochondrial precursor (EC|
           1.3.1.38) (Nuclear receptor-binding factor 1) (NRBF-1)
          Length = 373

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = -3

Query: 280 QPSDTDLGAKAPKDVKIQGVWYAQLESN*SIAEVK--ILIFCACIR 149
           QP    +     KD+K++G W +Q + N S  E K  ILI C  IR
Sbjct: 291 QPVTASVSMLIFKDLKLRGFWLSQWKKNHSPDEFKELILILCNLIR 336

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>LEPA_PHOLL (Q7N1X3) GTP-binding protein lepA|
          Length = 598

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
 Frame = +3

Query: 156 HAQKMSIFTSAML*LDSSCAYHTPWILTSLGALAPRSVSDGCTLSKTPITSPVSGLLLVT 335
           +A ++ IFT   +  D        W++ ++  +    V D  TL++ P   P+ G   V 
Sbjct: 233 NADRLGIFTPKRVDRDVLGCGEVGWLVCAIKDILGAPVGDTLTLARQPAEKPLPGFKKVK 292

Query: 336 LRV---MLPVEEDAFFTF 380
            +V   + PV  D +  F
Sbjct: 293 PQVYAGLFPVSSDDYEAF 310

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>H1_EUPES (Q9M5W4) Histone H1|
          Length = 229

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -3

Query: 595 QLPGGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGS 482
           QLP   R   LF +K+LVA+GK       F +PS R +
Sbjct: 86  QLPSNFRKLLLFHLKKLVASGKLVKVKNSFKLPSARAA 123


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,772,192
Number of Sequences: 219361
Number of extensions: 1359458
Number of successful extensions: 4944
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 4758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4925
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5824436538
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result