| Clone Name | rbaal19k22 |
|---|---|
| Clone Library Name | barley_pub |
>CLD23_MOUSE (Q9D7D7) Claudin-23| Length = 296 Score = 30.4 bits (67), Expect = 4.7 Identities = 28/82 (34%), Positives = 34/82 (41%), Gaps = 6/82 (7%) Frame = +3 Query: 129 YPL*LPLPGCCSRV--ALELALAIAASGIVPCRR----HPCGLKRGHISHVHVKRQHPVL 290 Y L L G C + LAL+ A CRR P G +R IS V+V P L Sbjct: 158 YSLVLGYLGSCLLLLGGFSLALSFAPWCEERCRRCRKAPPAGPRRSSISTVYVDWPEPAL 217 Query: 291 DVEVLQYSDHLLEHEFPPHKPH 356 + YSD +H PP H Sbjct: 218 TPAIKYYSDG--QHRPPPTAEH 237
>CLIC6_RAT (Q811Q2) Chloride intracellular channel 6| Length = 612 Score = 30.4 bits (67), Expect = 4.7 Identities = 20/55 (36%), Positives = 26/55 (47%) Frame = -1 Query: 468 EGALVPGCDGGPPRCR*DQQAQGIHMAPAHTQLPGHGHEVCEEGTRAPRDDQSTE 304 EGAL+P GG R QQ QG + G EV E+ R P D +++E Sbjct: 106 EGALIPQSGGGAKR----QQVQG---TSSGLDAQGEAPEVPEDARREPEDPKASE 153
>IL24_MOUSE (Q925S4) Interleukin-24 precursor (Melanoma| differentiation-associated gene 7 protein) (MDA-7) (IL-4-induced secreted protein) (Th2-specific cytokine FISP) Length = 181 Score = 30.0 bits (66), Expect = 6.2 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = +1 Query: 1 LQPQAAFNISAATICIAYHQVYRSFIYTTEHTHHSRHAK 117 L+PQ N+S A C H + + ++ T +HS+ AK Sbjct: 67 LKPQVLRNVSGAESCYLAHSLLKFYLNTVFKNYHSKIAK 105
>ASP_DROME (Q9VC45) Protein abnormal spindle| Length = 1954 Score = 29.6 bits (65), Expect = 8.0 Identities = 15/58 (25%), Positives = 31/58 (53%) Frame = -3 Query: 571 VLIWEKELTSLFMLPRRWKNWLS*RKEYYVTLTVRRSIGTRVRWWSSEM*MRPTSSRY 398 V++++K+ ++ + RR++ L RK+ V R+++ +WW S MR + Y Sbjct: 1461 VVLYQKQREAIIKVQRRYRGNLEMRKQIEVYQKQRQAVIRLQKWWRSIRDMRLCKAGY 1518
>SRA25_CAEEL (O17847) Serpentine receptor class alpha-25 (Protein sra-25)| Length = 335 Score = 29.6 bits (65), Expect = 8.0 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 Query: 31 AATICIAYHQVYRSFIYTTE 90 AAT+ I HQVYRSF+Y ++ Sbjct: 75 AATLEIRIHQVYRSFVYASD 94
>ADRB1_RAT (P18090) Beta-1 adrenergic receptor (Beta-1 adrenoceptor) (Beta-1| adrenoreceptor) Length = 466 Score = 29.6 bits (65), Expect = 8.0 Identities = 13/32 (40%), Positives = 15/32 (46%) Frame = -1 Query: 261 RAKCAPSSVHKDADDMELCLKRQSPGPAPGPP 166 RA C + H D CL R P P+PG P Sbjct: 385 RAACRRRAAHGDRPRASGCLARAGPPPSPGAP 416
>ADRB1_MOUSE (P34971) Beta-1 adrenergic receptor (Beta-1 adrenoceptor) (Beta-1| adrenoreceptor) Length = 466 Score = 29.6 bits (65), Expect = 8.0 Identities = 13/32 (40%), Positives = 15/32 (46%) Frame = -1 Query: 261 RAKCAPSSVHKDADDMELCLKRQSPGPAPGPP 166 RA C + H D CL R P P+PG P Sbjct: 385 RAACRRRAAHGDRPRASGCLARAGPPPSPGAP 416 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 100,136,543 Number of Sequences: 219361 Number of extensions: 2326236 Number of successful extensions: 7011 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 6566 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6984 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6086476506 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)