Clone Information

BLAST Search Result

Clone Name	rbaal19k15
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase ...	408	e-114
2	RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase ...	372	e-103
3	RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase a...	370	e-102
4	RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase a...	366	e-101
5	RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase a...	363	e-100
6	RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase ...	361	1e-99
7	RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase ...	360	2e-99
8	RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase a...	353	3e-97
9	RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase a...	348	8e-96
10	RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase ...	348	1e-95
11	RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase ...	345	5e-95
12	RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase a...	345	7e-95
13	RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase a...	344	1e-94
14	RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase a...	344	1e-94
15	RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase a...	315	7e-86
16	RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase a...	261	2e-69
17	RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase a...	224	2e-58
18	RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase a...	219	4e-57
19	RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase a...	52	2e-06
20	CAC1B_HUMAN (Q00975) Voltage-dependent N-type calcium channel al...	39	0.013
21	CAC1B_RABIT (Q05152) Voltage-dependent N-type calcium channel al...	37	0.050
22	GLT0_WHEAT (P10387) Glutenin, high molecular weight subunit DY10...	35	0.25
23	SYFB_STRPN (Q97S34) Phenylalanyl-tRNA synthetase beta chain (EC ...	34	0.33
24	CAC1B_RAT (Q02294) Voltage-dependent N-type calcium channel alph...	33	0.56
25	SYFB_STRMU (Q8CWX2) Phenylalanyl-tRNA synthetase beta chain (EC ...	33	0.95
26	LEU2_AZOVI (P96195) 3-isopropylmalate dehydratase large subunit ...	33	0.95
27	EPHB6_RAT (P0C0K7) Ephrin type-B receptor 6 precursor (Tyrosine-...	32	1.2
28	IF2_TROWT (Q83GT8) Translation initiation factor IF-2	32	1.2
29	IF2_TROW8 (Q83HG7) Translation initiation factor IF-2	32	1.2
30	TTC9_HUMAN (Q92623) Tetratricopeptide repeat protein 9 (TPR repe...	32	1.2
31	EPHB6_MOUSE (O08644) Ephrin type-B receptor 6 precursor (Tyrosin...	32	1.2
32	ICP0_EHV1V (P84445) Trans-acting transcriptional protein ICP0 (I...	32	1.6
33	ICP0_EHV1B (P28990) Trans-acting transcriptional protein ICP0	32	1.6
34	TRPA_BORPE (Q7VTF0) Tryptophan synthase alpha chain (EC 4.2.1.20)	32	2.1
35	TRPA_BORPA (Q7W5G9) Tryptophan synthase alpha chain (EC 4.2.1.20)	32	2.1
36	TRPA_BORBR (Q7WD05) Tryptophan synthase alpha chain (EC 4.2.1.20)	32	2.1
37	SYFB_STRP8 (Q8P1K0) Phenylalanyl-tRNA synthetase beta chain (EC ...	31	2.8
38	SYFB_STRP6 (Q5XCX3) Phenylalanyl-tRNA synthetase beta chain (EC ...	31	2.8
39	SYFB_STRP3 (Q8K820) Phenylalanyl-tRNA synthetase beta chain (EC ...	31	2.8
40	SYFB_STRA1 (Q3K1I7) Phenylalanyl-tRNA synthetase beta chain (EC ...	31	2.8
41	GLT3_WHEAT (P08488) Glutenin, high molecular weight subunit 12 p...	31	2.8
42	CUTL2_HUMAN (O14529) Homeobox protein cut-like 2 (Homeobox prote...	31	3.6
43	SYFB_STRR6 (Q8DQT6) Phenylalanyl-tRNA synthetase beta chain (EC ...	31	3.6
44	PRM2_RATFU (Q91VE1) Protamine-2 (Protamine-P2) (Sperm histone P2)	31	3.6
45	PRM2_MOUSE (P07978) Protamine-2 (Protamine-P2) (Sperm histone P2...	31	3.6
46	PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regu...	31	3.6
47	PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regu...	31	3.6
48	PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regu...	31	3.6
49	ABL_DROME (P00522) Tyrosine-protein kinase Abl (EC 2.7.10.2) (Ab...	30	4.7
50	SYFB_STRA5 (Q8E064) Phenylalanyl-tRNA synthetase beta chain (EC ...	30	4.7
51	SYFB_STRA3 (Q8E5U1) Phenylalanyl-tRNA synthetase beta chain (EC ...	30	4.7
52	IE18_PRVKA (P33479) Immediate-early protein IE180	30	4.7
53	IE18_PRVIF (P11675) Immediate-early protein IE180	30	6.2
54	CWC25_EMENI (Q5B0I1) Pre-mRNA-splicing factor cwc25	30	6.2
55	IBB3_WHEAT (P81713) Bowman-Birk type trypsin inhibitor (WTI)	30	6.2
56	HRG_RABIT (Q28640) Histidine-rich glycoprotein precursor (Histid...	30	6.2
57	SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1...	30	8.0
58	VE4_HPV5B (P26550) Probable protein E4	30	8.0
59	VE4_HPV05 (P06924) Probable protein E4	30	8.0

>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  408 bits (1048), Expect = e-114
 Identities = 200/200 (100%), Positives = 200/200 (100%)
 Frame = -2

Query: 648 GTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDG 469
           GTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDG
Sbjct: 226 GTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDG 285

Query: 468 RMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVR 289
           RMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVR
Sbjct: 286 RMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVR 345

Query: 288 KWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLS 109
           KWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLS
Sbjct: 346 KWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLS 405

Query: 108 EAALGQANDDAMKTGAFYGK 49
           EAALGQANDDAMKTGAFYGK
Sbjct: 406 EAALGQANDDAMKTGAFYGK 425

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>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  372 bits (956), Expect = e-103
 Identities = 176/200 (88%), Positives = 191/200 (95%)
 Frame = -2

Query: 648 GTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDG 469
           GTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNK ENPRVPI+VTGNDFSTLYAPLIRDG
Sbjct: 229 GTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKRENPRVPIVVTGNDFSTLYAPLIRDG 288

Query: 468 RMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVR 289
           RMEKFYWAPTR+DRIGVCKGIF+TDNV DE+VV++VDTFPGQSIDFFGALRARVYDDEVR
Sbjct: 289 RMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVR 348

Query: 288 KWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLS 109
           KWVG  G+ENI KRLVNSR+GP TF+QPKMT+EKL+EYGHMLVQEQ+NVKRVQLAD Y+S
Sbjct: 349 KWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMS 408

Query: 108 EAALGQANDDAMKTGAFYGK 49
           +AALG AN DAMKTG+FYGK
Sbjct: 409 QAALGDANQDAMKTGSFYGK 428

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>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  370 bits (950), Expect = e-102
 Identities = 176/199 (88%), Positives = 191/199 (95%)
 Frame = -2

Query: 648 GTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDG 469
           GTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKE+NPRVPIIVTGNDFSTLYAPLIRDG
Sbjct: 229 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDG 288

Query: 468 RMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVR 289
           RMEKFYWAPTR+DR+GVCKGIFRTDNVPDE +V++VD+FPGQSIDFFGALRARVYDDEVR
Sbjct: 289 RMEKFYWAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVR 348

Query: 288 KWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLS 109
           KWV + GVENI KRLVNSREGPP F+QPKMTIEKL+EYG+MLV+EQENVKRVQLA++YLS
Sbjct: 349 KWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLIEYGYMLVKEQENVKRVQLAEQYLS 408

Query: 108 EAALGQANDDAMKTGAFYG 52
           EAALG AN DAMKTG+FYG
Sbjct: 409 EAALGDANSDAMKTGSFYG 427

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>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  366 bits (940), Expect = e-101
 Identities = 175/198 (88%), Positives = 191/198 (96%)
 Frame = -2

Query: 648 GTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDG 469
           GTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKE+NPRVPIIVTGNDFSTLYAPLIRDG
Sbjct: 235 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDG 294

Query: 468 RMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVR 289
           RMEKFYWAPTREDRIGVCKGIFRTD V +E VV+LVDTFPGQSIDFFGALRARVYDDEVR
Sbjct: 295 RMEKFYWAPTREDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGALRARVYDDEVR 354

Query: 288 KWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLS 109
           +WV E GVENI+++LVNS+EGPPTF+QPK+TIEKL+EYGHMLV EQENVKRVQLADKYL+
Sbjct: 355 RWVSETGVENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYLN 414

Query: 108 EAALGQANDDAMKTGAFY 55
           EAALG+AN+DAMKTG+F+
Sbjct: 415 EAALGEANEDAMKTGSFF 432

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>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  363 bits (931), Expect = e-100
 Identities = 175/199 (87%), Positives = 187/199 (93%)
 Frame = -2

Query: 648 GTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDG 469
           GTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDG
Sbjct: 239 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDG 298

Query: 468 RMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVR 289
           RMEKFYWAPTREDRIGVC GIFR+DNV  E +V+LVDTFPGQSIDFFGALRARVYDDEVR
Sbjct: 299 RMEKFYWAPTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVR 358

Query: 288 KWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLS 109
           KW+  +GV++I K+LVNS+EGPPTF+QPKMTIEKL+EYG+MLVQEQENVKRVQLADKYLS
Sbjct: 359 KWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLS 418

Query: 108 EAALGQANDDAMKTGAFYG 52
           EAALG AN DAM TG FYG
Sbjct: 419 EAALGDANSDAMNTGTFYG 437

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>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  361 bits (926), Expect = 1e-99
 Identities = 173/199 (86%), Positives = 187/199 (93%)
 Frame = -2

Query: 648 GTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDG 469
           GTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDG
Sbjct: 239 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDG 298

Query: 468 RMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVR 289
           RMEKFYWAPTREDRIGVCKGIFRTDNV D+ +V+LVDTFPGQSIDFFGALRARVY DEVR
Sbjct: 299 RMEKFYWAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVR 358

Query: 288 KWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLS 109
           KWV E+GV+ I K+LVNS+EGPP+F+QPKMTI+KL+ YG MLVQEQENVKRVQLADKY+S
Sbjct: 359 KWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMS 418

Query: 108 EAALGQANDDAMKTGAFYG 52
           EAALG AN+DA+K G FYG
Sbjct: 419 EAALGDANNDAIKRGTFYG 437

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>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  360 bits (925), Expect = 2e-99
 Identities = 171/197 (86%), Positives = 187/197 (94%)
 Frame = -2

Query: 648 GTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDG 469
           GTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDG
Sbjct: 239 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDG 298

Query: 468 RMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVR 289
           RMEKFYWAPTREDRIGVCKGIFRTDNVP+E +V++VD FPGQSIDFFGALRARVYDDEVR
Sbjct: 299 RMEKFYWAPTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVR 358

Query: 288 KWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLS 109
           KWV E+GV+ I K+LVNS+EGPPTF+QPKMTI+KL++YG+MLV+EQENVKRVQLADKY+S
Sbjct: 359 KWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMS 418

Query: 108 EAALGQANDDAMKTGAF 58
           EAALG AN DA+K G F
Sbjct: 419 EAALGDANQDAIKRGTF 435

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>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  353 bits (905), Expect = 3e-97
 Identities = 165/198 (83%), Positives = 187/198 (94%)
 Frame = -2

Query: 648 GTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDG 469
           GTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEEN RVPIIVTGNDFSTLYAPLIRDG
Sbjct: 241 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRDG 300

Query: 468 RMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVR 289
           RMEKFYWAPTR+DR+GVCKGIFRTD VP+E + +LVDTFPGQSIDFFGALRARVYDDEVR
Sbjct: 301 RMEKFYWAPTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVR 360

Query: 288 KWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLS 109
           KW+  +GV+   K+LVNS+EGPPTFDQPKM+++KL++YG+MLVQEQENVKRVQLADKYL+
Sbjct: 361 KWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLN 420

Query: 108 EAALGQANDDAMKTGAFY 55
           EAALG AN+DA+K+G+F+
Sbjct: 421 EAALGNANEDAIKSGSFF 438

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>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  348 bits (893), Expect = 8e-96
 Identities = 167/195 (85%), Positives = 183/195 (93%)
 Frame = -2

Query: 648 GTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDG 469
           GTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNK+EN RVPIIVTGNDFSTLYAPLIRDG
Sbjct: 238 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDG 297

Query: 468 RMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVR 289
           RMEKFYWAPTREDRIGVCKGIFRTDNVP+EAVV++VD+FPGQSIDFFGALRARVYDDEVR
Sbjct: 298 RMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFGALRARVYDDEVR 357

Query: 288 KWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLS 109
           KWV   G+E I ++L+NSR+GPPTF+QPKMT+EKL+EYG+MLVQEQENVKRVQLA+ YL 
Sbjct: 358 KWVSGTGIELIGEKLLNSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENVKRVQLAETYLK 417

Query: 108 EAALGQANDDAMKTG 64
           EAALG AN DA+ TG
Sbjct: 418 EAALGDANADAINTG 432

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>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  348 bits (892), Expect = 1e-95
 Identities = 167/197 (84%), Positives = 182/197 (92%)
 Frame = -2

Query: 648 GTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDG 469
           GTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNK+EN RVPIIVTGNDFSTLYAPLIRDG
Sbjct: 243 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDG 302

Query: 468 RMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVR 289
           RMEKFYWAPTREDRIGVCKGIFRTDNVP+EAV+++VDTFPGQSIDFFGALRARVYDDEVR
Sbjct: 303 RMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEVR 362

Query: 288 KWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLS 109
           KWV   G+E I  +L+NS +GPPTF+QPKMT+EKL+EYG+MLVQEQENVKRVQLA+ YL 
Sbjct: 363 KWVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAETYLK 422

Query: 108 EAALGQANDDAMKTGAF 58
           EAALG AN DA+ TG F
Sbjct: 423 EAALGDANADAINTGNF 439

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>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  345 bits (886), Expect = 5e-95
 Identities = 167/198 (84%), Positives = 180/198 (90%)
 Frame = -2

Query: 648 GTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDG 469
           GTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNK+EN RVPIIVTGNDFSTLYAPLIRDG
Sbjct: 243 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDG 302

Query: 468 RMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVR 289
           RMEKFYWAPTREDRIGVC GIFRTDNVP E VV++VD FPGQSIDFFGALRARVYDDEVR
Sbjct: 303 RMEKFYWAPTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDEVR 362

Query: 288 KWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLS 109
           KWV   G+E I  +L+NS +GPPTF+QPKMTIEKL+EYG+MLVQEQENVKRVQLADKYL 
Sbjct: 363 KWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLK 422

Query: 108 EAALGQANDDAMKTGAFY 55
           EAALG AN DA+  G+F+
Sbjct: 423 EAALGDANADAINNGSFF 440

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>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  345 bits (885), Expect = 7e-95
 Identities = 163/198 (82%), Positives = 184/198 (92%)
 Frame = -2

Query: 648 GTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDG 469
           GTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKE+N RVPIIVTGNDFSTLYAPLIRDG
Sbjct: 243 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNARVPIIVTGNDFSTLYAPLIRDG 302

Query: 468 RMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVR 289
           RMEKFYWAPTREDRIGVCKGIFRTD VP++ +V LVD  PGQSIDFFGALRARVYDDEVR
Sbjct: 303 RMEKFYWAPTREDRIGVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGALRARVYDDEVR 362

Query: 288 KWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLS 109
           KW+  +GV+++ K+LVNS+EGPPTFDQPKMT++KL+ Y  MLVQEQENVKRVQLAD+YL+
Sbjct: 363 KWISGVGVDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLADQYLN 422

Query: 108 EAALGQANDDAMKTGAFY 55
           EAALG AN+DA+K+G+F+
Sbjct: 423 EAALGNANEDAIKSGSFF 440

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>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  344 bits (883), Expect = 1e-94
 Identities = 169/200 (84%), Positives = 179/200 (89%)
 Frame = -2

Query: 648 GTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDG 469
           GTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEEN RVPII TGNDFSTLYAPLIRDG
Sbjct: 239 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRDG 298

Query: 468 RMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVR 289
           RMEKFYWAPTREDRIGVCKGIFRTD + DE +V LVD FPGQSIDFFGALRARVYDDEVR
Sbjct: 299 RMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVR 358

Query: 288 KWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLS 109
           K+V  +GVE I KRLVNSREGPP F+QP+MT EKLMEYG+MLV EQENVKRVQLA+ YLS
Sbjct: 359 KFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLS 418

Query: 108 EAALGQANDDAMKTGAFYGK 49
           +AALG AN DA+  G FYGK
Sbjct: 419 QAALGDANADAIGRGTFYGK 438

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>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  344 bits (883), Expect = 1e-94
 Identities = 163/200 (81%), Positives = 182/200 (91%)
 Frame = -2

Query: 648 GTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDG 469
           GTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNK++N RVPIIVTGNDFSTLYAPLIRDG
Sbjct: 237 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDG 296

Query: 468 RMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVR 289
           RMEKFYWAPTREDRIGVC GIF+TD VP E VV+LVD FPGQSIDFFGALRARVY DEVR
Sbjct: 297 RMEKFYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVR 356

Query: 288 KWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLS 109
           KWV  +GV+N+ K+LVNS++GPP F+QP+MT++KLMEYG+MLVQEQENVKRVQLAD+Y+S
Sbjct: 357 KWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMS 416

Query: 108 EAALGQANDDAMKTGAFYGK 49
            AALG AN DA+  G F+GK
Sbjct: 417 SAALGDANKDAIDRGTFFGK 436

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>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  315 bits (807), Expect = 7e-86
 Identities = 151/174 (86%), Positives = 161/174 (92%)
 Frame = -2

Query: 648 GTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDG 469
           GTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDG
Sbjct: 236 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDG 295

Query: 468 RMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVR 289
           RM+KFYWAPTREDRIG+C GIFRTD VP E +V+LVDTFPGQSIDFFGALRARVYDDEVR
Sbjct: 296 RMDKFYWAPTREDRIGICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGALRARVYDDEVR 355

Query: 288 KWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQL 127
           KW   +GVE I + LVNS+E PPTFDQPKMTIEKL+EYG+MLV EQENVKRV+L
Sbjct: 356 KWAVGVGVERIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKL 409

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>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  261 bits (666), Expect = 2e-69
 Identities = 131/183 (71%), Positives = 147/183 (80%)
 Frame = -2

Query: 645 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGR 466
           TTQYTVNNQMVNATLMNIAD PTNVQLPG+Y  EE PRVPI+ TGNDFSTLYAPLIRDGR
Sbjct: 213 TTQYTVNNQMVNATLMNIADNPTNVQLPGVYKNEEIPRVPIVCTGNDFSTLYAPLIRDGR 272

Query: 465 MEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRK 286
           MEK+YW PTREDRIGVC GIF+ DNV    V  LVDTFPGQSIDFFGALRARVYDD VR+
Sbjct: 273 MEKYYWNPTREDRIGVCMGIFQEDNVQRREVENLVDTFPGQSIDFFGALRARVYDDMVRQ 332

Query: 285 WVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSE 106
           W+ + GV+ I ++LVN+R+      +  M +  L++YG  LV EQENVKRVQLAD YLS 
Sbjct: 333 WITDTGVDKIGQQLVNARQ-KVAMPKVSMDLNVLIKYGKSLVDEQENVKRVQLADAYLSG 391

Query: 105 AAL 97
           A L
Sbjct: 392 AEL 394

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>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score =  224 bits (570), Expect = 2e-58
 Identities = 104/176 (59%), Positives = 135/176 (76%)
 Frame = -2

Query: 642 TQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM 463
           TQYTVN Q+VNATLMNIAD PT+VQLPG Y+     RVPIIVTGNDFSTLYAPLIRDGRM
Sbjct: 114 TQYTVNTQLVNATLMNIADNPTDVQLPGSYDSTPLRRVPIIVTGNDFSTLYAPLIRDGRM 173

Query: 462 EKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKW 283
           EKFYW P R++++G+  GIF  D +    V +LVD+FP QSIDFF ALR+R+YD+++R +
Sbjct: 174 EKFYWEPHRDEKVGIVGGIFAEDGLSQRDVEKLVDSFPNQSIDFFSALRSRIYDEQIRDF 233

Query: 282 VGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKY 115
           + ++G EN+S R+VNS EGPP F +P  T+  L+E  + +V EQ+ ++  QL D+Y
Sbjct: 234 IHQVGYENVSLRVVNSLEGPPAFKKPDFTLSHLIESANFMVAEQKRIETSQLVDEY 289

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>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score =  219 bits (559), Expect = 4e-57
 Identities = 104/176 (59%), Positives = 133/176 (75%)
 Frame = -2

Query: 642 TQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM 463
           TQYTVN Q+VNATLMNIAD PT+VQLPG Y+     RVPIIVTGNDFSTLYAPLIRDGRM
Sbjct: 114 TQYTVNTQLVNATLMNIADNPTDVQLPGSYDSNPIRRVPIIVTGNDFSTLYAPLIRDGRM 173

Query: 462 EKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKW 283
           EKFYW P R+D++G+  GIF  D +    + +LVDTFP QSIDFF ALR+R+YD ++R +
Sbjct: 174 EKFYWEPNRDDKVGIVGGIFAEDGLSQREIEQLVDTFPKQSIDFFSALRSRIYDIQIRDF 233

Query: 282 VGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKY 115
           + ++G E IS R+VNS E PP F +P  ++  L+E G++++ EQ+ V   QL D+Y
Sbjct: 234 IHKVGFERISLRVVNSLEAPPEFKKPDFSLAHLIESGNLVLGEQQRVDNSQLVDEY 289

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>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast (RuBisCO activase) (RA) (Fragments)
          Length = 32

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 30/60 (50%), Positives = 31/60 (51%)
 Frame = -2

Query: 366 LVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEK 187
           LVDTFPGQSIDFFGAL                            REGPPTF+QP MTIEK
Sbjct: 1   LVDTFPGQSIDFFGAL----------------------------REGPPTFEQPAMTIEK 32

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>CAC1B_HUMAN (Q00975) Voltage-dependent N-type calcium channel alpha-1B subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.2)
            (Calcium channel, L type, alpha-1 polypeptide isoform 5)
            (Brain calcium channel III) (BIII)
          Length = 2339

 Score = 38.9 bits (89), Expect = 0.013
 Identities = 32/96 (33%), Positives = 37/96 (38%), Gaps = 9/96 (9%)
 Frame = -1

Query: 619  DGERHPDEHRGRAHQRAAPGDVQQGGEPPRAHHRHRQR-----LLDAVRSPDP*RAHGEV 455
            DG R P   + R     AP    +G +PPR HHRHR +       D  R+  P    GE 
Sbjct: 824  DGARGPVGGKARPEAAEAP----EGVDPPRRHHRHRDKDKTPAAGDQDRAEAPKAESGEP 879

Query: 454  LLGAHPRGPHR----RVQGHLPHRQRPGRGRGEAGG 359
                    PHR       G    R   GRG G  GG
Sbjct: 880  GAREERPRPHRSHSKEAAGPPEARSERGRGPGPEGG 915



 Score = 30.8 bits (68), Expect = 3.6
 Identities = 28/99 (28%), Positives = 35/99 (35%), Gaps = 6/99 (6%)
 Frame = -1

Query: 640  AVHGEQPDGERHPDEHRGRAHQRAAPGDVQQ------GGEPPRAHHRHRQRLLDAVRSPD 479
            A  GE    E  P  HR  + + A P + +       G E  R HHR       A R P 
Sbjct: 874  AESGEPGAREERPRPHRSHSKEAAGPPEARSERGRGPGPEGGRRHHRRGSPEEAAEREPR 933

Query: 478  P*RAHGEVLLGAHPRGPHRRVQGHLPHRQRPGRGRGEAG 362
              RAH         + P +   G    R+   RG   AG
Sbjct: 934  RHRAH-------RHQDPSKECAGAKGERRARHRGGPRAG 965

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>CAC1B_RABIT (Q05152) Voltage-dependent N-type calcium channel alpha-1B subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.2)
            (Calcium channel, L type, alpha-1 polypeptide isoform 5)
            (Brain calcium channel III) (BIII)
          Length = 2339

 Score = 37.0 bits (84), Expect = 0.050
 Identities = 33/107 (30%), Positives = 43/107 (40%), Gaps = 13/107 (12%)
 Frame = -1

Query: 625  QPDGERHPDE----HRGRAHQRAAPG--------DVQQGGEPPRAHHRHRQRLLDAVRSP 482
            +PD + H D       GR   R  PG        +  +G +PPR HHRHR    D  ++P
Sbjct: 807  RPDVKTHLDRPLVVEPGRDAPRGPPGGKSRPDGSEAPEGADPPRRHHRHR----DKDKAP 862

Query: 481  DP*RAHGEVLLGAHPRGPHRRVQ-GHLPHRQRPGRGRGEAGGHLPGA 344
                + GE       R    R + G L  R+  GR R       PGA
Sbjct: 863  ATVPSAGE-----QDRAEALRAEGGELGPREERGRPRRSRSKEAPGA 904

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>GLT0_WHEAT (P10387) Glutenin, high molecular weight subunit DY10 precursor|
          Length = 648

 Score = 34.7 bits (78), Expect = 0.25
 Identities = 25/95 (26%), Positives = 42/95 (44%)
 Frame = -1

Query: 631 GEQPDGERHPDEHRGRAHQRAAPGDVQQGGEPPRAHHRHRQRLLDAVRSPDP*RAHGEVL 452
           G+QP+ E+ P    G+  Q   P  +QQ G+  +     +     +++ P      G+  
Sbjct: 401 GQQPEQEQQP----GQGQQGYYPTSLQQPGQGQQQGQGQQGYYPTSLQQP------GQGQ 450

Query: 451 LGAHPRGPHRRVQGHLPHRQRPGRGRGEAGGHLPG 347
            G +P    +  QG    RQ+PG+G+    G  PG
Sbjct: 451 QGHYPASLQQPGQGQPGQRQQPGQGQHPEQGKQPG 485



 Score = 32.7 bits (73), Expect = 0.95
 Identities = 39/157 (24%), Positives = 59/157 (37%), Gaps = 3/157 (1%)
 Frame = -1

Query: 565 PGDVQQGGEPPRAHHRHRQRLLDAVRSPDP*RAHGEVLLGAHPRGPHRRVQGHLPHRQRP 386
           PG  QQG  P    H  +++     + P+  +  G+   G +P  P +  QG  P RQ  
Sbjct: 197 PGQGQQGYYPTSLQHTGQRQQPVQGQQPEQGQQPGQWQQGYYPTSPQQLGQGQQP-RQWQ 255

Query: 385 GRGRGEAGGHLPGAVHXXXXXXXXXXXXXXXXXXXXXXXXGEHLQAPRQLQGG---AAHV 215
             G+G+  GH P +                             LQ P Q Q G   A+  
Sbjct: 256 QSGQGQQ-GHYPTS-----------------------------LQQPGQGQQGHYLASQQ 285

Query: 214 RPAQDDHREAHGVRPHAGPGAGERQACAARRQVPQRG 104
           +P Q   ++ H       PG G++    A +Q P +G
Sbjct: 286 QPGQG--QQGHYPASQQQPGQGQQGHYPASQQQPGQG 320

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>SYFB_STRPN (Q97S34) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 801

 Score = 34.3 bits (77), Expect = 0.33
 Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
 Frame = +1

Query: 310 PCPQRAEEVD--GLPREGVHQPHHGLVRDVVGAEDALAHADAVLAGGRPVELLHAPVTDQ 483
           P  + AE++   G+  EGV  P  GL + VVG  + L+  D       P   LH    + 
Sbjct: 17  PSQELAEKMSTTGIEVEGVESPAAGLSKIVVG--EVLSCEDV------PETHLHVCQINV 68

Query: 484 GSVQRREVVAGDDDGHAGVLLLVVHPRELHVGGRVRD 594
           G  + R++V G  +  AG+ ++V  P     G R+ D
Sbjct: 69  GEEEERQIVCGAPNVRAGIKVMVALP-----GARIAD 100

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>CAC1B_RAT (Q02294) Voltage-dependent N-type calcium channel alpha-1B subunit|
           (Voltage-gated calcium channel alpha subunit Cav2.2)
           (Calcium channel, L type, alpha-1 polypeptide isoform 5)
           (Brain calcium channel III) (BIII)
          Length = 2336

 Score = 33.5 bits (75), Expect = 0.56
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = -1

Query: 601 DEHRGRAHQRAAPGDVQ--QGGEPPRAHHRHRQRLLDAVRSP 482
           D  RG A  ++ P   +  +G +PPR HHRHR R   +  +P
Sbjct: 825 DGLRGPAGNKSKPEGTEATEGADPPRRHHRHRDRDKTSASTP 866

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>SYFB_STRMU (Q8CWX2) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 801

 Score = 32.7 bits (73), Expect = 0.95
 Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
 Frame = +1

Query: 310 PCPQRAEEVD--GLPREGVHQPHHGLVRDVVGAEDALAHADAVLAGGRPVELLHAPVTDQ 483
           P  + AE++   G+  EGV  P  GL + VVG    L+  D       P   LH    D 
Sbjct: 17  PSHELAEKMSTTGIEVEGVDVPAEGLSKLVVG--HVLSCEDV------PETHLHLCQVDT 68

Query: 484 GSVQRREVVAGDDDGHAGVLLLVVHPRELHVGGRVRD 594
           G  + R++V G  +  AG+ ++V  P     G R+ D
Sbjct: 69  GEEESRQIVCGAPNITAGIKVIVALP-----GARIAD 100

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>LEU2_AZOVI (P96195) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)|
           (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI)
          Length = 470

 Score = 32.7 bits (73), Expect = 0.95
 Identities = 30/82 (36%), Positives = 32/82 (39%)
 Frame = -1

Query: 592 RGRAHQRAAPGDVQQGGEPPRAHHRHRQRLLDAVRSPDP*RAHGEVLLGAHPRGPHRRVQ 413
           RG  H+   P      G P     RHR+R L A    DP R    V         HRRVQ
Sbjct: 53  RGCQHRHPGPQRADHPGSPVGGR-RHRRRNL-AHPGADPGRELRRVR--------HRRVQ 102

Query: 412 GHLPHRQRPGRGRGEAGGHLPG 347
              P       GR  AG HLPG
Sbjct: 103 DERPAPGHRPCGRPGAGRHLPG 124

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>EPHB6_RAT (P0C0K7) Ephrin type-B receptor 6 precursor (Tyrosine-protein|
           kinase-defective receptor EPH-6)
          Length = 1013

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
 Frame = -1

Query: 553 QQGGEPPRAHHRHRQRLLDAVRS----PDP*RAHGEVLLGAHPRGPHRRVQGHLPHRQRP 386
           Q GG PPR H     R + AV      P    A G+ L  A P G ++ + G++P    P
Sbjct: 270 QAGGSPPRLHCNGEGRWMVAVGGCRCQPGHQPARGDKLCQACPEGSYKALPGNVPCSPCP 329

Query: 385 GR 380
            R
Sbjct: 330 AR 331

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>IF2_TROWT (Q83GT8) Translation initiation factor IF-2|
          Length = 803

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
 Frame = -1

Query: 574 RAAPGDVQQGGEPPRAHHRHRQRLLD---AVRSPDP*RAHGEVLLGAHPRGPHRRVQGHL 404
           R  P    + G  P A  +   +L     A + P   +A G+      P   HRRV   L
Sbjct: 100 RGVPSGAPRPGNNPYAPRQGMGQLATPGPATKRPVKFKAEGD----KKPASTHRRVPAPL 155

Query: 403 PHRQRPGRGRGEAG 362
           P ++ P RGRG  G
Sbjct: 156 PQKRTPLRGRGAPG 169

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>IF2_TROW8 (Q83HG7) Translation initiation factor IF-2|
          Length = 803

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
 Frame = -1

Query: 574 RAAPGDVQQGGEPPRAHHRHRQRLLD---AVRSPDP*RAHGEVLLGAHPRGPHRRVQGHL 404
           R  P    + G  P A  +   +L     A + P   +A G+      P   HRRV   L
Sbjct: 100 RGVPSGAPRPGNNPYAPRQGMGQLATPGPATKRPVKFKAEGD----KKPASTHRRVPAPL 155

Query: 403 PHRQRPGRGRGEAG 362
           P ++ P RGRG  G
Sbjct: 156 PQKRTPLRGRGAPG 169

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>TTC9_HUMAN (Q92623) Tetratricopeptide repeat protein 9 (TPR repeat protein 9)|
           (Fragment)
          Length = 336

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 25/91 (27%), Positives = 33/91 (36%)
 Frame = -1

Query: 631 GEQPDGERHPDEHRGRAHQRAAPGDVQQGGEPPRAHHRHRQRLLDAVRSPDP*RAHGEVL 452
           G    G RHP    G   +RAA    ++ GE P +          +  S +   A  +  
Sbjct: 12  GPASTGPRHPQVAEGGGRERAARS--REAGEGPASEAAAAAAGAASGSSGENGSAGRQTA 69

Query: 451 LGAHPRGPHRRVQGHLPHRQRPGRGRGEAGG 359
            G H R      +G  P    PGR  G  GG
Sbjct: 70  AGCHGRHEACEARGRRPRLLNPGRRGGGGGG 100

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>EPHB6_MOUSE (O08644) Ephrin type-B receptor 6 precursor (Tyrosine-protein|
           kinase-defective receptor EPH-6) (MEP)
          Length = 1014

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
 Frame = -1

Query: 553 QQGGEPPRAHHRHRQRLLDAVRS----PDP*RAHGEVLLGAHPRGPHRRVQGHLPHRQRP 386
           Q GG PPR H     R + AV      P    A G+ L  A P G ++ + G++P    P
Sbjct: 271 QAGGSPPRLHCNGEGRWMVAVGGCRCQPGHQPARGDKLCQACPEGSYKALAGNVPCSPCP 330

Query: 385 GR 380
            R
Sbjct: 331 AR 332

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>ICP0_EHV1V (P84445) Trans-acting transcriptional protein ICP0 (Infected cell|
           protein 0)
          Length = 532

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 18/48 (37%), Positives = 22/48 (45%)
 Frame = -1

Query: 253 QAPRQLQGGAAHVRPAQDDHREAHGVRPHAGPGAGERQACAARRQVPQ 110
           QAPRQ     A  RP         G RP A PG   R++   RR+ P+
Sbjct: 250 QAPRQEDSRPARARPGPPTRGRRRGRRP-AAPGPASRRSARLRRRQPR 296

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>ICP0_EHV1B (P28990) Trans-acting transcriptional protein ICP0|
          Length = 532

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 18/48 (37%), Positives = 22/48 (45%)
 Frame = -1

Query: 253 QAPRQLQGGAAHVRPAQDDHREAHGVRPHAGPGAGERQACAARRQVPQ 110
           QAPRQ     A  RP         G RP A PG   R++   RR+ P+
Sbjct: 250 QAPRQEDSRPARARPGPPTRGRRRGRRP-AAPGPASRRSARLRRRQPR 296

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>TRPA_BORPE (Q7VTF0) Tryptophan synthase alpha chain (EC 4.2.1.20)|
          Length = 285

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 382 VRDVVGAEDALAHADAVLAGGRPVELLHAPVTDQGSVQRRE 504
           +RD   A+   AHADAV+ G + +E +       G+ Q+ E
Sbjct: 218 IRDAASAQRIAAHADAVVIGSKLIETMEQAGAQAGADQKNE 258

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>TRPA_BORPA (Q7W5G9) Tryptophan synthase alpha chain (EC 4.2.1.20)|
          Length = 285

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 382 VRDVVGAEDALAHADAVLAGGRPVELLHAPVTDQGSVQRRE 504
           +RD   A+   AHADAV+ G + +E +       G+ Q+ E
Sbjct: 218 IRDAASAQRIAAHADAVVIGSKLIETMEQTGAQAGADQKNE 258

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>TRPA_BORBR (Q7WD05) Tryptophan synthase alpha chain (EC 4.2.1.20)|
          Length = 285

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 382 VRDVVGAEDALAHADAVLAGGRPVELLHAPVTDQGSVQRRE 504
           +RD   A+   AHADAV+ G + +E +       G+ Q+ E
Sbjct: 218 IRDAASAQRIAAHADAVVIGSKLIETMEQAGAQAGADQKNE 258

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>SYFB_STRP8 (Q8P1K0) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 801

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 26/85 (30%), Positives = 37/85 (43%)
 Frame = +1

Query: 340 GLPREGVHQPHHGLVRDVVGAEDALAHADAVLAGGRPVELLHAPVTDQGSVQRREVVAGD 519
           G+  EG+  P  GL + VVG    L+  D       P   LH    D G    R++V G 
Sbjct: 29  GIEVEGIEVPAEGLSKLVVG--HVLSCEDV------PETHLHLCQVDTGDETPRQIVCGA 80

Query: 520 DDGHAGVLLLVVHPRELHVGGRVRD 594
            +  AG+ ++V  P     G R+ D
Sbjct: 81  PNVKAGIKVIVAVP-----GARIAD 100

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>SYFB_STRP6 (Q5XCX3) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 801

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 26/85 (30%), Positives = 37/85 (43%)
 Frame = +1

Query: 340 GLPREGVHQPHHGLVRDVVGAEDALAHADAVLAGGRPVELLHAPVTDQGSVQRREVVAGD 519
           G+  EG+  P  GL + VVG    L+  D       P   LH    D G    R++V G 
Sbjct: 29  GIEVEGIEVPAEGLSKLVVG--HVLSCEDV------PETHLHLCQVDTGDETPRQIVCGA 80

Query: 520 DDGHAGVLLLVVHPRELHVGGRVRD 594
            +  AG+ ++V  P     G R+ D
Sbjct: 81  PNVKAGIKVIVAVP-----GARIAD 100

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>SYFB_STRP3 (Q8K820) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 801

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 26/85 (30%), Positives = 37/85 (43%)
 Frame = +1

Query: 340 GLPREGVHQPHHGLVRDVVGAEDALAHADAVLAGGRPVELLHAPVTDQGSVQRREVVAGD 519
           G+  EG+  P  GL + VVG    L+  D       P   LH    D G    R++V G 
Sbjct: 29  GIEVEGIEVPAEGLSKLVVG--HVLSCEDV------PETHLHLCQVDTGDETPRQIVCGA 80

Query: 520 DDGHAGVLLLVVHPRELHVGGRVRD 594
            +  AG+ ++V  P     G R+ D
Sbjct: 81  PNVKAGIKVIVAVP-----GARIAD 100

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>SYFB_STRA1 (Q3K1I7) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 801

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 26/85 (30%), Positives = 35/85 (41%)
 Frame = +1

Query: 340 GLPREGVHQPHHGLVRDVVGAEDALAHADAVLAGGRPVELLHAPVTDQGSVQRREVVAGD 519
           G+  EGV  P  GL + VVG          V     P   LH    D G  + R+VV G 
Sbjct: 29  GIEVEGVETPAEGLSKLVVG--------HIVSCEDVPDTYLHLCQVDTGDDELRQVVCGA 80

Query: 520 DDGHAGVLLLVVHPRELHVGGRVRD 594
            +   G+ ++V  P     G R+ D
Sbjct: 81  PNVKTGINVIVAVP-----GARIAD 100

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>GLT3_WHEAT (P08488) Glutenin, high molecular weight subunit 12 precursor|
          Length = 660

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
 Frame = -1

Query: 631 GEQPDGERHPDEHRGRAHQRAAPGDVQQGGEPPRAHHRHRQRLLDAVRSPDP*RAHGEVL 452
           G+QP+ E+ P    G+  Q   P  +QQ G+  +     +     +++ P      G+  
Sbjct: 411 GQQPEQEQQP----GQGQQGYYPTSLQQPGQGQQQGQGQQGYYPTSLQQP------GQGQ 460

Query: 451 LGAHPRGPHR--RVQGHLPHRQRPGRGRGEAGGHLPG 347
            G +P    +  + QG    RQ+PG+G+    G  PG
Sbjct: 461 QGHYPASLQQPGQGQGQPGQRQQPGQGQHPEQGQQPG 497

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>CUTL2_HUMAN (O14529) Homeobox protein cut-like 2 (Homeobox protein Cux-2)|
            (Cut-like 2)
          Length = 1424

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
 Frame = -1

Query: 631  GEQPDGERHPDEHRGRAHQRAAPGDVQQGGEPPRAHHRHRQRLLDAVR--SPDP 476
            G+ P  E HPD        + APG +  GG  P     H Q+  +A     PDP
Sbjct: 1262 GQGPPKEEHPDPPGNDGLPKVAPGPLLPGGSTPDCPSLHPQQESEAGERLHPDP 1315

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>SYFB_STRR6 (Q8DQT6) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 800

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
 Frame = +1

Query: 310 PCPQRAEEVD--GLPREGVHQPHHGLVRDVVGAEDALAHADAVLAGGRPVELLHAPVTDQ 483
           P  + AE++   G+  EGV  P  GL + VVG  + L+  D       P   LH    + 
Sbjct: 17  PSQELAEKMSTTGIEVEGVESPAAGLSKIVVG--EVLSCEDV------PETHLHVCQVNV 68

Query: 484 GSVQRREVVAGDDDGHAGVLLLVVHPRELHVGGRVRD 594
           G  + R++V G  +  AG+ ++V  P     G R+ D
Sbjct: 69  GE-EERQIVCGAPNVRAGIKVMVALP-----GARIAD 99

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>PRM2_RATFU (Q91VE1) Protamine-2 (Protamine-P2) (Sperm histone P2)|
          Length = 105

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -1

Query: 625 QPDGERHPDEHRGRAHQRAAPGDVQQGGEPPRAHHRHRQ 509
           Q  G+ H  E +G+  Q  +P  V+  G   R HHRHR+
Sbjct: 15  QGPGQDHEREEQGQG-QELSPERVEDYGRTHRGHHRHRR 52

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>PRM2_MOUSE (P07978) Protamine-2 (Protamine-P2) (Sperm histone P2) [Contains:|
           PP2-A; PP2-C; PP2-D; PP2-B (Protamine MP2)]
          Length = 107

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 26/83 (31%), Positives = 33/83 (39%)
 Frame = -1

Query: 625 QPDGERHPDEHRGRAHQRAAPGDVQQGGEPPRAHHRHRQRLLDAVRSPDP*RAHGEVLLG 446
           Q  G+ H  E +G+  Q  +P  V+  G   R HH HR R     R     R H      
Sbjct: 15  QGPGQDHEREEQGQG-QGLSPERVEDYGRTHRGHHHHRHRRCSRKRLH---RIH------ 64

Query: 445 AHPRGPHRRVQGHLPHRQRPGRG 377
              R   RR +    HR+R  RG
Sbjct: 65  KRRRSCRRRRRHSCRHRRRHRRG 87

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>PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (MHC class I region proline-rich protein CAT53)
           (Protein FB19)
          Length = 940

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 25/87 (28%), Positives = 29/87 (33%), Gaps = 1/87 (1%)
 Frame = -1

Query: 412 GHLPHRQRPGRGRGEAGGHLPGAVHXXXXXXXXXXXXXXXXXXXXXXXXGEHLQAPRQLQ 233
           GH PH + PG G G  GGH P                                + P    
Sbjct: 812 GHRPH-EGPGGGMGAGGGHRPH-------------------------------EGPGGSM 839

Query: 232 GGAAHVRPAQ-DDHREAHGVRPHAGPG 155
           GG+   RP +   H   HG RPH  PG
Sbjct: 840 GGSGGHRPHEGPGHGGPHGHRPHDVPG 866

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>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (MHC class I region proline-rich protein CAT53)
          Length = 940

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 25/87 (28%), Positives = 29/87 (33%), Gaps = 1/87 (1%)
 Frame = -1

Query: 412 GHLPHRQRPGRGRGEAGGHLPGAVHXXXXXXXXXXXXXXXXXXXXXXXXGEHLQAPRQLQ 233
           GH PH + PG G G  GGH P                                + P    
Sbjct: 813 GHRPH-EGPGGGMGAGGGHRPH-------------------------------EGPGGSM 840

Query: 232 GGAAHVRPAQDD-HREAHGVRPHAGPG 155
           GG+   RP +   H   HG RPH  PG
Sbjct: 841 GGSGGHRPHEGPGHGGPHGHRPHDVPG 867



 Score = 30.4 bits (67), Expect = 4.7
 Identities = 30/117 (25%), Positives = 36/117 (30%), Gaps = 3/117 (2%)
 Frame = -1

Query: 412  GHLPHRQRPGRGRGEAGGHLPGAVHXXXXXXXXXXXXXXXXXXXXXXXXGEHLQAPRQLQ 233
            GH PH + PG G G + GH P                              H      + 
Sbjct: 751  GHRPH-EGPGGGMGNSSGHRPHEGPGSGMGSGHRPHEGPGSSMGGGGGHRPHEGPGGGIS 809

Query: 232  GGAAHVRPAQDDHR---EAHGVRPHAGPGAGERQACAARRQVPQRGGARPSQRRRHE 71
            GG+ H RP +          G RPH GPG G        R     G   P   R H+
Sbjct: 810  GGSGH-RPHEGPGGGMGAGGGHRPHEGPG-GSMGGSGGHRPHEGPGHGGPHGHRPHD 864

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>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (Phosphatase 1 nuclear targeting subunit) (MHC class
           I region proline-rich protein CAT53) (FB19 protein)
           (PP1-binding protein of 114 kDa) (p99)
          Length = 940

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 25/87 (28%), Positives = 29/87 (33%), Gaps = 1/87 (1%)
 Frame = -1

Query: 412 GHLPHRQRPGRGRGEAGGHLPGAVHXXXXXXXXXXXXXXXXXXXXXXXXGEHLQAPRQLQ 233
           GH PH + PG G G  GGH P                                + P    
Sbjct: 812 GHRPH-EGPGGGMGAGGGHRPH-------------------------------EGPGGSM 839

Query: 232 GGAAHVRPAQDD-HREAHGVRPHAGPG 155
           GG+   RP +   H   HG RPH  PG
Sbjct: 840 GGSGGHRPHEGPGHGGPHGHRPHDVPG 866



 Score = 29.6 bits (65), Expect = 8.0
 Identities = 30/117 (25%), Positives = 36/117 (30%), Gaps = 3/117 (2%)
 Frame = -1

Query: 412  GHLPHRQRPGRGRGEAGGHLPGAVHXXXXXXXXXXXXXXXXXXXXXXXXGEHLQAPRQLQ 233
            GH PH + PG G G + GH P                              H      + 
Sbjct: 750  GHRPH-EGPGGGMGNSSGHRPHEGPGGGMGSGHRPHEGPGGSMGGGGGHRPHEGPGGGIS 808

Query: 232  GGAAHVRPAQDDHR---EAHGVRPHAGPGAGERQACAARRQVPQRGGARPSQRRRHE 71
            GG+ H RP +          G RPH GPG G        R     G   P   R H+
Sbjct: 809  GGSGH-RPHEGPGGGMGAGGGHRPHEGPG-GSMGGSGGHRPHEGPGHGGPHGHRPHD 863

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>ABL_DROME (P00522) Tyrosine-protein kinase Abl (EC 2.7.10.2) (Abelson|
           protein) (D-ash)
          Length = 1620

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = -3

Query: 353 SRGSPSTSSARCGHGCTTTRCASGSARSA 267
           S  +PSTS    G G TTT  ASG A S+
Sbjct: 647 SSSAPSTSGVATGGGATTTTAASGCASSS 675

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>SYFB_STRA5 (Q8E064) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 801

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 26/85 (30%), Positives = 35/85 (41%)
 Frame = +1

Query: 340 GLPREGVHQPHHGLVRDVVGAEDALAHADAVLAGGRPVELLHAPVTDQGSVQRREVVAGD 519
           G+  EGV  P  GL + VVG          V     P   LH    D G  + R+VV G 
Sbjct: 29  GIEVEGVETPAEGLSKLVVG--------HIVSCEDVPDTHLHLCQVDTGDDELRQVVCGA 80

Query: 520 DDGHAGVLLLVVHPRELHVGGRVRD 594
            +   G+ ++V  P     G R+ D
Sbjct: 81  PNVKTGINVIVAVP-----GARIAD 100

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>SYFB_STRA3 (Q8E5U1) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 801

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 26/85 (30%), Positives = 35/85 (41%)
 Frame = +1

Query: 340 GLPREGVHQPHHGLVRDVVGAEDALAHADAVLAGGRPVELLHAPVTDQGSVQRREVVAGD 519
           G+  EGV  P  GL + VVG          V     P   LH    D G  + R+VV G 
Sbjct: 29  GIEVEGVETPAEGLSKLVVG--------HIVSCEDVPDTHLHLCQVDTGDDELRQVVCGA 80

Query: 520 DDGHAGVLLLVVHPRELHVGGRVRD 594
            +   G+ ++V  P     G R+ D
Sbjct: 81  PNVKTGINVIVAVP-----GARIAD 100

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>IE18_PRVKA (P33479) Immediate-early protein IE180|
          Length = 1446

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 49/227 (21%), Positives = 65/227 (28%), Gaps = 52/227 (22%)
 Frame = -1

Query: 562 GDVQQGGEPPRAHHRHRQRLLD---AVRSPDP*RAHGEVLLGAHP--------------- 437
           G    GG+  R HH+HR+ LLD   A R  DP        + ++P               
Sbjct: 246 GAPSAGGDRGRHHHQHREPLLDEPAAARRLDPRPLGARSPVSSNPNSNSNSTTTVAVETV 305

Query: 436 -RGPHRRVQG------------HLPHRQRPG-----RGRGEAGG---------------H 356
            RGP +   G              P R+R G     RGRG +                  
Sbjct: 306 ARGPEKDEDGLGLAGDGGAPPQRQPRRRRAGEGALRRGRGFSSSSSSGSDSDLSPARSPS 365

Query: 355 LPGAVHXXXXXXXXXXXXXXXXXXXXXXXXGEHLQAPRQLQGGAAHVRPAQDDHREAHGV 176
            P A                              +    ++ GA   R        A   
Sbjct: 366 APRAPAAAARRSASSSSSSSSSSSSSSSSSSSEGEEDEGVRPGAPLARAGPPPSPPAPAA 425

Query: 175 RPHAGPGAGERQACAARRQVPQRGGARPSQR-RRHEDRCLLRQVEGP 38
            P   P A    + AA    P    ARP +R RR  +  L    +GP
Sbjct: 426 APR--PSASSASSSAAASPAPAPEPARPPRRKRRSTNNHLSLMADGP 470

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>IE18_PRVIF (P11675) Immediate-early protein IE180|
          Length = 1461

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 52/224 (23%), Positives = 68/224 (30%), Gaps = 54/224 (24%)
 Frame = -1

Query: 547 GGEPPRAHHRHRQRLLD---AVRSPDP*RAHGEVLLGAHP----------------RGPH 425
           GG+  R HH+HR+ LLD   A R  DP        + ++P                RGP 
Sbjct: 259 GGDRGRHHHQHREPLLDEPAAARRLDPRPLGARSPVSSNPNSSSSSTTTVAVEPVARGPE 318

Query: 424 RRVQG------------HLPHRQRPG-----RGRG----EAGG-----------HLPGAV 341
           +   G              P R+R G     RGRG     +GG             P A 
Sbjct: 319 KDEDGLGLAGDGGAPLQRQPRRRRAGEGALRRGRGFSSSSSGGSDSDLSPARSPSAPRAP 378

Query: 340 HXXXXXXXXXXXXXXXXXXXXXXXXGEHLQAPRQLQGGA--AHVRPAQDDHREAHGVRPH 167
                                        +    ++ GA  A   P       A   RP 
Sbjct: 379 AAAAAAARRSASSSSSSSSSSSSSSSSEGEEDEGVRPGAPLARAGPPPSPPAPAAAPRPS 438

Query: 166 AGPGAGERQACAARRQVPQRGGARPSQR-RRHEDRCLLRQVEGP 38
           A   A    + AA    P    ARP +R RR  +  L    +GP
Sbjct: 439 AS-SASATSSSAAASPAPAPEPARPPRRKRRSTNNHLSLMADGP 481

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>CWC25_EMENI (Q5B0I1) Pre-mRNA-splicing factor cwc25|
          Length = 415

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 21/73 (28%), Positives = 27/73 (36%)
 Frame = -1

Query: 613 ERHPDEHRGRAHQRAAPGDVQQGGEPPRAHHRHRQRLLDAVRSPDP*RAHGEVLLGAHPR 434
           ERH +  R R H+       +  G      HRHR+R     RSP   +         H R
Sbjct: 171 ERHQERERERGHRHR-----RDSGNDSHRSHRHRRRSRSRSRSPRVEKDDRRHRDREHDR 225

Query: 433 GPHRRVQGHLPHR 395
             HR   G   +R
Sbjct: 226 RSHRDRDGERENR 238

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>IBB3_WHEAT (P81713) Bowman-Birk type trypsin inhibitor (WTI)|
          Length = 71

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = +3

Query: 546 PCCTSPGAARWWARPRCSSGWRSPSGCSP 632
           PCC   G       PRC+    SPSGC P
Sbjct: 9   PCCDECGTCTRMIPPRCTCMDVSPSGCHP 37

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>HRG_RABIT (Q28640) Histidine-rich glycoprotein precursor|
           (Histidine-proline-rich glycoprotein) (HPRG) (Fragment)
          Length = 526

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 31/102 (30%), Positives = 35/102 (34%), Gaps = 7/102 (6%)
 Frame = -1

Query: 634 HGEQPDGERHPDEHRGRAHQRAAPGDVQQG----GEPPRAHHRHRQRLLDAVRSPDP*RA 467
           HG  P G  HP  H    H     G    G    G PP  H  H     D          
Sbjct: 365 HGPPPHG--HPP-HGPPPHGHPPHGPPPHGHPPHGPPPHGHPPHGHGFHD---------- 411

Query: 466 HGEVLLGAHPRGP---HRRVQGHLPHRQRPGRGRGEAGGHLP 350
           HG     +H  GP   H+   G  P  + PG+ RG   GH P
Sbjct: 412 HGPCDPPSHKEGPQDLHQHAMG--PPPKHPGK-RGPGKGHFP 450

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>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 26/92 (28%), Positives = 33/92 (35%), Gaps = 2/92 (2%)
 Frame = -1

Query: 613 ERHPDEHRGRAHQRAAPGDVQQGGEPPRAHHRHRQRLLDAVRSPDP*RAHGEVLLGAHPR 434
           E+     R R+  R+           PR  HR R R     R P P R           R
Sbjct: 270 EKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRP-----SPRRR 324

Query: 433 GPHRRVQGHLPHR--QRPGRGRGEAGGHLPGA 344
            P RR+     HR  + PGR R  +   L G+
Sbjct: 325 TPPRRMPPPPRHRRSRSPGRRRRRSSASLSGS 356

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>VE4_HPV5B (P26550) Probable protein E4|
          Length = 245

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 34/108 (31%), Positives = 37/108 (34%), Gaps = 16/108 (14%)
 Frame = -1

Query: 616 GERHPDEHRGRAHQRAAPGDVQQGGEPPRAHHRHRQRLLDAVRSPDP*R-----AHGEVL 452
           G++ PD   G    RA        G PP    R   RL       DP       A GEV 
Sbjct: 79  GDQGPDTGPGLGPGRAPSPKPTPLGPPPGPGPRRSARLGPLQADRDPGEGPQVPAEGEV- 137

Query: 451 LGAHPRG-----------PHRRVQGHLPHRQRPGRGRGEAGGHLPGAV 341
              HP G           PH    GH P  Q+P    G   GH  GAV
Sbjct: 138 -EGHPGGDQGHPPPTPPAPHNGHSGHGPKVQQPEGPEGRE-GHEEGAV 183

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>VE4_HPV05 (P06924) Probable protein E4|
          Length = 245

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 35/108 (32%), Positives = 39/108 (36%), Gaps = 16/108 (14%)
 Frame = -1

Query: 616 GERHPDEHRGRAHQRAAPGDVQQGGEPPRAHHRHRQRL--LDAVRSPDP*R---AHGEVL 452
           G++ PD   G    R         G PP    R   RL  L A R P+      A GEV 
Sbjct: 79  GDQGPDTGPGLGPGRGPSPKPTPLGPPPGPGPRRSPRLGPLQADRDPEEGPQPPAEGEV- 137

Query: 451 LGAHPRG-----------PHRRVQGHLPHRQRPGRGRGEAGGHLPGAV 341
              HP G           PH    GH P  Q+P    G   GH  GAV
Sbjct: 138 -EGHPGGDQGHPPPPPPAPHNGHSGHEPKVQQPEGPEGRE-GHEEGAV 183


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,896,278
Number of Sequences: 219361
Number of extensions: 1910781
Number of successful extensions: 7855
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 7196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7817
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6086476506
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result