| Clone Name | rbaal7d21 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK101565.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050E24, full insert sequence Length = 1998 Score = 601 bits (303), Expect = e-168 Identities = 575/666 (86%) Strand = Plus / Minus Query: 68 tcatgaacgaagtagttttgggccagagtttgaagctacccatgaagcaattacatccac 127 |||||||||||||| | |||| ||||| ||||| | | ||||||| ||||||| || || Sbjct: 1461 tcatgaacgaagtaatcttggaccagaatttgactcaatccatgaaacaattacgtcaac 1402 Query: 128 aagtgcattgacatcctcagggacctgtgttcgcagaacgccagagtcggtgccaaaagt 187 ||||| ||||||||||| | || |||| ||| |||||||| || || | || ||||| Sbjct: 1401 aagtgtattgacatcctttgagatttgtgctcgtagaacgcccgaatccgcacctaaagt 1342 Query: 188 ggtacctacctccttagcaacagcctcccatggcgtgcctgttgtaagatttgccaggag 247 | ||||||||||||||||||||||||||||||| || ||||||| ||||||| |||||| Sbjct: 1341 gctacctacctccttagcaacagcctcccatggtgtccctgttgctagatttgtcaggag 1282 Query: 248 ttcacctccacggctcactgcatcagccattcctggtggaacgtcaggaagtacctgttg 307 ||||||||| | | | |||||||| |||||| |||||||||| |||||||||||||| || Sbjct: 1281 ttcacctcctctgtttactgcatcggccattgctggtggaacatcaggaagtacctgctg 1222 Query: 308 taatggaaggccatgatccccaggaagtgaacgaatcgacatatcaagcagtgagctaat 367 ||| || || |||||||| ||||||||||| ||||| ||||| ||||||||||||||||| Sbjct: 1221 taacggtagtccatgatctccaggaagtgaccgaattgacatgtcaagcagtgagctaat 1162 Query: 368 ggcagattcagagcttagtacttgtgcaatgatggaggtttcatcaatttgatcatcttc 427 ||||||||| |||||||||||||| |||| || || |||||||||||||||||||||| Sbjct: 1161 ggcagattcggagcttagtacttgcgcaagaatagatgtttcatcaatttgatcatcttt 1102 Query: 428 gaactttataaggagatttcgagatattccgtagtaggattttattagccggcgtgtctc 487 ||||||||| | ||| |||||||| || || ||||||||||||| ||||| |||||||| Sbjct: 1101 gaactttatcaagaggtttcgagaaatcccatagtaggattttaccagccgacgtgtctc 1042 Query: 488 ctctggttttggaatgaagtcttctcggccctttactaagtccatatacagtggaggaag 547 ||||| ||||||| ||| ||||||||||| |||||||| |||||||||||||||||||| Sbjct: 1041 ttctggctttggaacgaattcttctcggccttttactaaatccatatacagtggaggaag 982 Query: 548 ttgttgaattaagggaagaagctgcttaacaacaggagggcctagattctcaatttgctt 607 ||| |||| ||| || || |||||||||||||||||||||| |||||||||| |||||| Sbjct: 981 ttgctgaactaatggcaggagctgcttaacaacaggagggctaagattctcaagttgctt 922 Query: 608 aatagccgcttcagccccaaaacgaattgttggagatgatgtcagctgggataatattgg 667 ||| || ||||| ||||||||||||| ||||||| ||||||||| |||||| |||||||| Sbjct: 921 aatggctgcttccgccccaaaacgaagtgttggatatgatgtcaactgggaaaatattgg 862 Query: 668 gccaaaactctgtgccatgggaacgatgacaggtgaaaataatggaatcgccaggcttgc 727 ||||||||||||||||||||||| || ||||| ||||||||||||| |||| |||||| Sbjct: 861 cccaaaactctgtgccatgggaacaattacaggcgaaaataatggaactgccaagcttgc 802 Query: 728 ttnctt 733 || ||| Sbjct: 801 ttcctt 796
>dbj|AK068579.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157C11, full insert sequence Length = 2126 Score = 601 bits (303), Expect = e-168 Identities = 575/666 (86%) Strand = Plus / Minus Query: 68 tcatgaacgaagtagttttgggccagagtttgaagctacccatgaagcaattacatccac 127 |||||||||||||| | |||| ||||| ||||| | | ||||||| ||||||| || || Sbjct: 1500 tcatgaacgaagtaatcttggaccagaatttgactcaatccatgaaacaattacgtcaac 1441 Query: 128 aagtgcattgacatcctcagggacctgtgttcgcagaacgccagagtcggtgccaaaagt 187 ||||| ||||||||||| | || |||| ||| |||||||| || || | || ||||| Sbjct: 1440 aagtgtattgacatcctttgagatttgtgctcgtagaacgcccgaatccgcacctaaagt 1381 Query: 188 ggtacctacctccttagcaacagcctcccatggcgtgcctgttgtaagatttgccaggag 247 | ||||||||||||||||||||||||||||||| || ||||||| ||||||| |||||| Sbjct: 1380 gctacctacctccttagcaacagcctcccatggtgtccctgttgctagatttgtcaggag 1321 Query: 248 ttcacctccacggctcactgcatcagccattcctggtggaacgtcaggaagtacctgttg 307 ||||||||| | | | |||||||| |||||| |||||||||| |||||||||||||| || Sbjct: 1320 ttcacctcctctgtttactgcatcggccattgctggtggaacatcaggaagtacctgctg 1261 Query: 308 taatggaaggccatgatccccaggaagtgaacgaatcgacatatcaagcagtgagctaat 367 ||| || || |||||||| ||||||||||| ||||| ||||| ||||||||||||||||| Sbjct: 1260 taacggtagtccatgatctccaggaagtgaccgaattgacatgtcaagcagtgagctaat 1201 Query: 368 ggcagattcagagcttagtacttgtgcaatgatggaggtttcatcaatttgatcatcttc 427 ||||||||| |||||||||||||| |||| || || |||||||||||||||||||||| Sbjct: 1200 ggcagattcggagcttagtacttgcgcaagaatagatgtttcatcaatttgatcatcttt 1141 Query: 428 gaactttataaggagatttcgagatattccgtagtaggattttattagccggcgtgtctc 487 ||||||||| | ||| |||||||| || || ||||||||||||| ||||| |||||||| Sbjct: 1140 gaactttatcaagaggtttcgagaaatcccatagtaggattttaccagccgacgtgtctc 1081 Query: 488 ctctggttttggaatgaagtcttctcggccctttactaagtccatatacagtggaggaag 547 ||||| ||||||| ||| ||||||||||| |||||||| |||||||||||||||||||| Sbjct: 1080 ttctggctttggaacgaattcttctcggccttttactaaatccatatacagtggaggaag 1021 Query: 548 ttgttgaattaagggaagaagctgcttaacaacaggagggcctagattctcaatttgctt 607 ||| |||| ||| || || |||||||||||||||||||||| |||||||||| |||||| Sbjct: 1020 ttgctgaactaatggcaggagctgcttaacaacaggagggctaagattctcaagttgctt 961 Query: 608 aatagccgcttcagccccaaaacgaattgttggagatgatgtcagctgggataatattgg 667 ||| || ||||| ||||||||||||| ||||||| ||||||||| |||||| |||||||| Sbjct: 960 aatggctgcttccgccccaaaacgaagtgttggatatgatgtcaactgggaaaatattgg 901 Query: 668 gccaaaactctgtgccatgggaacgatgacaggtgaaaataatggaatcgccaggcttgc 727 ||||||||||||||||||||||| || ||||| ||||||||||||| |||| |||||| Sbjct: 900 cccaaaactctgtgccatgggaacaattacaggcgaaaataatggaactgccaagcttgc 841 Query: 728 ttnctt 733 || ||| Sbjct: 840 ttcctt 835
>ref|XM_472392.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 861 Score = 561 bits (283), Expect = e-156 Identities = 477/542 (88%) Strand = Plus / Minus Query: 192 cctacctccttagcaacagcctcccatggcgtgcctgttgtaagatttgccaggagttca 251 ||||||||||||||||||||||||||||| || ||||||| ||||||| |||||||||| Sbjct: 671 cctacctccttagcaacagcctcccatggtgtccctgttgctagatttgtcaggagttca 612 Query: 252 cctccacggctcactgcatcagccattcctggtggaacgtcaggaagtacctgttgtaat 311 ||||| | | | |||||||| |||||| |||||||||| |||||||||||||| ||||| Sbjct: 611 cctcctctgtttactgcatcggccattgctggtggaacatcaggaagtacctgctgtaac 552 Query: 312 ggaaggccatgatccccaggaagtgaacgaatcgacatatcaagcagtgagctaatggca 371 || || |||||||| ||||||||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 551 ggtagtccatgatctccaggaagtgaccgaattgacatgtcaagcagtgagctaatggca 492 Query: 372 gattcagagcttagtacttgtgcaatgatggaggtttcatcaatttgatcatcttcgaac 431 ||||| |||||||||||||| |||| || || |||||||||||||||||||||| |||| Sbjct: 491 gattcggagcttagtacttgcgcaagaatagatgtttcatcaatttgatcatctttgaac 432 Query: 432 tttataaggagatttcgagatattccgtagtaggattttattagccggcgtgtctcctct 491 ||||| | ||| |||||||| || || ||||||||||||| ||||| |||||||| ||| Sbjct: 431 tttatcaagaggtttcgagaaatcccatagtaggattttaccagccgacgtgtctcttct 372 Query: 492 ggttttggaatgaagtcttctcggccctttactaagtccatatacagtggaggaagttgt 551 || ||||||| ||| ||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 371 ggctttggaacgaattcttctcggccttttactaaatccatatacagtggaggaagttgc 312 Query: 552 tgaattaagggaagaagctgcttaacaacaggagggcctagattctcaatttgcttaata 611 |||| ||| || || |||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 311 tgaactaatggcaggagctgcttaacaacaggagggctaagattctcaagttgcttaatg 252 Query: 612 gccgcttcagccccaaaacgaattgttggagatgatgtcagctgggataatattgggcca 671 || ||||| ||||||||||||| ||||||| ||||||||| |||||| |||||||| ||| Sbjct: 251 gctgcttccgccccaaaacgaagtgttggatatgatgtcaactgggaaaatattggccca 192 Query: 672 aaactctgtgccatgggaacgatgacaggtgaaaataatggaatcgccaggcttgcttnc 731 |||||||||||||||||||| || ||||| ||||||||||||| |||| |||||||| | Sbjct: 191 aaactctgtgccatgggaacaattacaggcgaaaataatggaactgccaagcttgcttcc 132 Query: 732 tt 733 || Sbjct: 131 tt 130
>emb|AL731639.3|OSJN00288 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000315_02, complete sequence Length = 112404 Score = 174 bits (88), Expect = 3e-40 Identities = 151/172 (87%) Strand = Plus / Plus Query: 300 acctgttgtaatggaaggccatgatccccaggaagtgaacgaatcgacatatcaagcagt 359 ||||| ||||| || || |||||||| ||||||||||| ||||| ||||| ||||||||| Sbjct: 104175 acctgctgtaacggtagtccatgatctccaggaagtgaccgaattgacatgtcaagcagt 104234 Query: 360 gagctaatggcagattcagagcttagtacttgtgcaatgatggaggtttcatcaatttga 419 ||||||||||||||||| |||||||||||||| |||| || || ||||||||||||||| Sbjct: 104235 gagctaatggcagattcggagcttagtacttgcgcaagaatagatgtttcatcaatttga 104294 Query: 420 tcatcttcgaactttataaggagatttcgagatattccgtagtaggatttta 471 ||||||| ||||||||| | ||| |||||||| || || ||||||||||||| Sbjct: 104295 tcatctttgaactttatcaagaggtttcgagaaatcccatagtaggatttta 104346 Score = 168 bits (85), Expect = 2e-38 Identities = 199/237 (83%) Strand = Plus / Plus Query: 68 tcatgaacgaagtagttttgggccagagtttgaagctacccatgaagcaattacatccac 127 |||||||||||||| | |||| ||||| ||||| | | ||||||| ||||||| || || Sbjct: 103764 tcatgaacgaagtaatcttggaccagaatttgactcaatccatgaaacaattacgtcaac 103823 Query: 128 aagtgcattgacatcctcagggacctgtgttcgcagaacgccagagtcggtgccaaaagt 187 ||||| ||||||||||| | || |||| ||| |||||||| || || | || ||||| Sbjct: 103824 aagtgtattgacatcctttgagatttgtgctcgtagaacgcccgaatccgcacctaaagt 103883 Query: 188 ggtacctacctccttagcaacagcctcccatggcgtgcctgttgtaagatttgccaggag 247 | ||||||||||||||||||||||||||||||| || ||||||| ||||||| |||||| Sbjct: 103884 gctacctacctccttagcaacagcctcccatggtgtccctgttgctagatttgtcaggag 103943 Query: 248 ttcacctccacggctcactgcatcagccattcctggtggaacgtcaggaagtacctg 304 ||||||||| | | | |||||||| |||||| |||||||||| |||||||||||||| Sbjct: 103944 ttcacctcctctgtttactgcatcggccattgctggtggaacatcaggaagtacctg 104000 Score = 155 bits (78), Expect = 3e-34 Identities = 129/146 (88%) Strand = Plus / Plus Query: 474 agccggcgtgtctcctctggttttggaatgaagtcttctcggccctttactaagtccata 533 ||||| |||||||| ||||| ||||||| ||| ||||||||||| |||||||| |||||| Sbjct: 105965 agccgacgtgtctcttctggctttggaacgaattcttctcggccttttactaaatccata 106024 Query: 534 tacagtggaggaagttgttgaattaagggaagaagctgcttaacaacaggagggcctaga 593 ||||||||||||||||| |||| ||| || || |||||||||||||||||||||| ||| Sbjct: 106025 tacagtggaggaagttgctgaactaatggcaggagctgcttaacaacaggagggctaaga 106084 Query: 594 ttctcaatttgcttaatagccgcttc 619 ||||||| ||||||||| || ||||| Sbjct: 106085 ttctcaagttgcttaatggctgcttc 106110 Score = 127 bits (64), Expect = 6e-26 Identities = 97/108 (89%) Strand = Plus / Plus Query: 622 ccccaaaacgaattgttggagatgatgtcagctgggataatattgggccaaaactctgtg 681 |||||||||||| ||||||| ||||||||| |||||| |||||||| ||||||||||||| Sbjct: 106669 ccccaaaacgaagtgttggatatgatgtcaactgggaaaatattggcccaaaactctgtg 106728 Query: 682 ccatgggaacgatgacaggtgaaaataatggaatcgccaggcttgctt 729 |||||||||| || ||||| ||||||||||||| |||| |||||||| Sbjct: 106729 ccatgggaacaattacaggcgaaaataatggaactgccaagcttgctt 106776
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 174 bits (88), Expect = 3e-40 Identities = 151/172 (87%) Strand = Plus / Plus Query: 300 acctgttgtaatggaaggccatgatccccaggaagtgaacgaatcgacatatcaagcagt 359 ||||| ||||| || || |||||||| ||||||||||| ||||| ||||| ||||||||| Sbjct: 20134270 acctgctgtaacggtagtccatgatctccaggaagtgaccgaattgacatgtcaagcagt 20134329 Query: 360 gagctaatggcagattcagagcttagtacttgtgcaatgatggaggtttcatcaatttga 419 ||||||||||||||||| |||||||||||||| |||| || || ||||||||||||||| Sbjct: 20134330 gagctaatggcagattcggagcttagtacttgcgcaagaatagatgtttcatcaatttga 20134389 Query: 420 tcatcttcgaactttataaggagatttcgagatattccgtagtaggatttta 471 ||||||| ||||||||| | ||| |||||||| || || ||||||||||||| Sbjct: 20134390 tcatctttgaactttatcaagaggtttcgagaaatcccatagtaggatttta 20134441 Score = 168 bits (85), Expect = 2e-38 Identities = 199/237 (83%) Strand = Plus / Plus Query: 68 tcatgaacgaagtagttttgggccagagtttgaagctacccatgaagcaattacatccac 127 |||||||||||||| | |||| ||||| ||||| | | ||||||| ||||||| || || Sbjct: 20133859 tcatgaacgaagtaatcttggaccagaatttgactcaatccatgaaacaattacgtcaac 20133918 Query: 128 aagtgcattgacatcctcagggacctgtgttcgcagaacgccagagtcggtgccaaaagt 187 ||||| ||||||||||| | || |||| ||| |||||||| || || | || ||||| Sbjct: 20133919 aagtgtattgacatcctttgagatttgtgctcgtagaacgcccgaatccgcacctaaagt 20133978 Query: 188 ggtacctacctccttagcaacagcctcccatggcgtgcctgttgtaagatttgccaggag 247 | ||||||||||||||||||||||||||||||| || ||||||| ||||||| |||||| Sbjct: 20133979 gctacctacctccttagcaacagcctcccatggtgtccctgttgctagatttgtcaggag 20134038 Query: 248 ttcacctccacggctcactgcatcagccattcctggtggaacgtcaggaagtacctg 304 ||||||||| | | | |||||||| |||||| |||||||||| |||||||||||||| Sbjct: 20134039 ttcacctcctctgtttactgcatcggccattgctggtggaacatcaggaagtacctg 20134095 Score = 155 bits (78), Expect = 3e-34 Identities = 129/146 (88%) Strand = Plus / Plus Query: 474 agccggcgtgtctcctctggttttggaatgaagtcttctcggccctttactaagtccata 533 ||||| |||||||| ||||| ||||||| ||| ||||||||||| |||||||| |||||| Sbjct: 20136060 agccgacgtgtctcttctggctttggaacgaattcttctcggccttttactaaatccata 20136119 Query: 534 tacagtggaggaagttgttgaattaagggaagaagctgcttaacaacaggagggcctaga 593 ||||||||||||||||| |||| ||| || || |||||||||||||||||||||| ||| Sbjct: 20136120 tacagtggaggaagttgctgaactaatggcaggagctgcttaacaacaggagggctaaga 20136179 Query: 594 ttctcaatttgcttaatagccgcttc 619 ||||||| ||||||||| || ||||| Sbjct: 20136180 ttctcaagttgcttaatggctgcttc 20136205 Score = 127 bits (64), Expect = 6e-26 Identities = 97/108 (89%) Strand = Plus / Plus Query: 622 ccccaaaacgaattgttggagatgatgtcagctgggataatattgggccaaaactctgtg 681 |||||||||||| ||||||| ||||||||| |||||| |||||||| ||||||||||||| Sbjct: 20136764 ccccaaaacgaagtgttggatatgatgtcaactgggaaaatattggcccaaaactctgtg 20136823 Query: 682 ccatgggaacgatgacaggtgaaaataatggaatcgccaggcttgctt 729 |||||||||| || ||||| ||||||||||||| |||| |||||||| Sbjct: 20136824 ccatgggaacaattacaggcgaaaataatggaactgccaagcttgctt 20136871
>ref|NM_124160.2| Arabidopsis thaliana unknown protein AT5G47860 mRNA, complete cds Length = 1501 Score = 65.9 bits (33), Expect = 2e-07 Identities = 108/133 (81%) Strand = Plus / Minus Query: 405 gtttcatcaatttgatcatcttcgaactttataaggagatttcgagatattccgtagtag 464 |||||||| ||| |||||| ||||| ||||| | ||||| | ||| ||||| |||||| Sbjct: 1052 gtttcatctattgaatcatcctcgaattttatcaacagattcctagagattccatagtag 993 Query: 465 gattttattagccggcgtgtctcctctggttttggaatgaagtcttctcggccctttact 524 ||| |||| || || | ||| || ||||||||||||| || ||||||| ||||||||| Sbjct: 992 gatcttataaggcgtcttgtttcttctggttttggaacaaaatcttctcttccctttact 933 Query: 525 aagtccatataca 537 |||||||| |||| Sbjct: 932 aagtccatgtaca 920
>gb|AY142015.1| Arabidopsis thaliana At5g47860/MCA23_20 mRNA, complete cds Length = 1296 Score = 65.9 bits (33), Expect = 2e-07 Identities = 108/133 (81%) Strand = Plus / Minus Query: 405 gtttcatcaatttgatcatcttcgaactttataaggagatttcgagatattccgtagtag 464 |||||||| ||| |||||| ||||| ||||| | ||||| | ||| ||||| |||||| Sbjct: 959 gtttcatctattgaatcatcctcgaattttatcaacagattcctagagattccatagtag 900 Query: 465 gattttattagccggcgtgtctcctctggttttggaatgaagtcttctcggccctttact 524 ||| |||| || || | ||| || ||||||||||||| || ||||||| ||||||||| Sbjct: 899 gatcttataaggcgtcttgtttcttctggttttggaacaaaatcttctcttccctttact 840 Query: 525 aagtccatataca 537 |||||||| |||| Sbjct: 839 aagtccatgtaca 827
>gb|AY058159.1| Arabidopsis thaliana AT5g47860/MCA23_20 mRNA, complete cds Length = 1430 Score = 65.9 bits (33), Expect = 2e-07 Identities = 108/133 (81%) Strand = Plus / Minus Query: 405 gtttcatcaatttgatcatcttcgaactttataaggagatttcgagatattccgtagtag 464 |||||||| ||| |||||| ||||| ||||| | ||||| | ||| ||||| |||||| Sbjct: 982 gtttcatctattgaatcatcctcgaattttatcaacagattcctagagattccatagtag 923 Query: 465 gattttattagccggcgtgtctcctctggttttggaatgaagtcttctcggccctttact 524 ||| |||| || || | ||| || ||||||||||||| || ||||||| ||||||||| Sbjct: 922 gatcttataaggcgtcttgtttcttctggttttggaacaaaatcttctcttccctttact 863 Query: 525 aagtccatataca 537 |||||||| |||| Sbjct: 862 aagtccatgtaca 850
>emb|BX832182.1|CNS09ZRY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH57ZD08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1392 Score = 65.9 bits (33), Expect = 2e-07 Identities = 108/133 (81%) Strand = Plus / Minus Query: 405 gtttcatcaatttgatcatcttcgaactttataaggagatttcgagatattccgtagtag 464 |||||||| ||| |||||| ||||| ||||| | ||||| | ||| ||||| |||||| Sbjct: 977 gtttcatctattgaatcatcctcgaattttatcaacagattcctagagattccatagtag 918 Query: 465 gattttattagccggcgtgtctcctctggttttggaatgaagtcttctcggccctttact 524 ||| |||| || || | ||| || ||||||||||||| || ||||||| ||||||||| Sbjct: 917 gatcttataaggcgtcttgtttcttctggttttggaacaaaatcttctcttccctttact 858 Query: 525 aagtccatataca 537 |||||||| |||| Sbjct: 857 aagtccatgtaca 845
>emb|BX832080.1|CNS09ZUF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH50ZB04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1503 Score = 65.9 bits (33), Expect = 2e-07 Identities = 108/133 (81%) Strand = Plus / Minus Query: 405 gtttcatcaatttgatcatcttcgaactttataaggagatttcgagatattccgtagtag 464 |||||||| ||| |||||| ||||| ||||| | ||||| | ||| ||||| |||||| Sbjct: 1053 gtttcatctattgaatcatcctcgaattttatcaacagattcctagagattccatagtag 994 Query: 465 gattttattagccggcgtgtctcctctggttttggaatgaagtcttctcggccctttact 524 ||| |||| || || | ||| || ||||||||||||| || ||||||| ||||||||| Sbjct: 993 gatcttataaggcgtcttgtttcttctggttttggaacaaaatcttctcttccctttact 934 Query: 525 aagtccatataca 537 |||||||| |||| Sbjct: 933 aagtccatgtaca 921
>emb|BX831123.1|CNS09ZHA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS5ZC04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1432 Score = 58.0 bits (29), Expect = 4e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 453 attccgtagtaggattttattagccggcgtgtctcctctggttttggaatgaagtcttct 512 ||||| ||||||||| |||| || || | ||| || ||||||||||||| || |||||| Sbjct: 966 attccatagtaggatcttataaggcgtcttgtttcttctggttttggaacaaaatcttct 907 Query: 513 cggccctttactaagtccatataca 537 | ||||||||||||||||| |||| Sbjct: 906 cttccctttactaagtccatgtaca 882
>emb|BX832126.1|CNS09ZKJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH53ZC09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1370 Score = 52.0 bits (26), Expect = 0.003 Identities = 108/134 (80%), Gaps = 1/134 (0%) Strand = Plus / Minus Query: 405 gtttcatcaatttgatcatcttcgaactttataaggagatttcgagatattccgtagtag 464 |||||||| ||| |||||| ||||| ||||| | ||||| | ||| ||||| |||||| Sbjct: 976 gtttcatctattgaatcatcctcgaattttatcaacagattcctagagattccatagtag 917 Query: 465 gattttat-tagccggcgtgtctcctctggttttggaatgaagtcttctcggccctttac 523 ||| |||| ||| || | ||| || ||| ||||||||| || ||||||| |||||||| Sbjct: 916 gatcttatataggcgtcttgtttcttcttgttttggaacaaaatcttctcttccctttac 857 Query: 524 taagtccatataca 537 ||||||||| |||| Sbjct: 856 taagtccatgtaca 843
>dbj|AB016886.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCA23 Length = 82503 Score = 50.1 bits (25), Expect = 0.011 Identities = 43/49 (87%) Strand = Plus / Minus Query: 489 tctggttttggaatgaagtcttctcggccctttactaagtccatataca 537 ||||||||||||| || ||||||| ||||||||||||||||| |||| Sbjct: 60824 tctggttttggaacaaaatcttctcttccctttactaagtccatgtaca 60776
>ref|XM_534013.2| PREDICTED: Canis familiaris similar to testis spermatogenesis apoptosis-related protein 6, transcript variant 1 (LOC476809), mRNA Length = 1098 Score = 48.1 bits (24), Expect = 0.042 Identities = 27/28 (96%) Strand = Plus / Minus Query: 641 agatgatgtcagctgggataatattggg 668 |||||||||| ||||||||||||||||| Sbjct: 637 agatgatgtcggctgggataatattggg 610
>ref|XM_855930.1| PREDICTED: Canis familiaris similar to testis spermatogenesis apoptosis-related protein 6, transcript variant 2 (LOC476809), mRNA Length = 573 Score = 48.1 bits (24), Expect = 0.042 Identities = 27/28 (96%) Strand = Plus / Minus Query: 641 agatgatgtcagctgggataatattggg 668 |||||||||| ||||||||||||||||| Sbjct: 112 agatgatgtcggctgggataatattggg 85
>gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0074L11, complete sequence Length = 180703 Score = 46.1 bits (23), Expect = 0.17 Identities = 23/23 (100%) Strand = Plus / Plus Query: 666 gggccaaaactctgtgccatggg 688 ||||||||||||||||||||||| Sbjct: 67745 gggccaaaactctgtgccatggg 67767
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.17 Identities = 23/23 (100%) Strand = Plus / Plus Query: 666 gggccaaaactctgtgccatggg 688 ||||||||||||||||||||||| Sbjct: 21715692 gggccaaaactctgtgccatggg 21715714
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.17 Identities = 23/23 (100%) Strand = Plus / Plus Query: 666 gggccaaaactctgtgccatggg 688 ||||||||||||||||||||||| Sbjct: 22025891 gggccaaaactctgtgccatggg 22025913
>gb|AC123901.2| Homo sapiens chromosome 3 clone RP11-952G4, complete sequence Length = 217409 Score = 44.1 bits (22), Expect = 0.66 Identities = 25/26 (96%) Strand = Plus / Plus Query: 578 aacaggagggcctagattctcaattt 603 ||||||||||||||||| |||||||| Sbjct: 88407 aacaggagggcctagatactcaattt 88432
>emb|CR538724.4| Mouse DNA sequence from clone RP23-81N12 on chromosome X, complete sequence Length = 44445 Score = 44.1 bits (22), Expect = 0.66 Identities = 25/26 (96%) Strand = Plus / Minus Query: 309 aatggaaggccatgatccccaggaag 334 |||||||||||||||||| ||||||| Sbjct: 24341 aatggaaggccatgatcctcaggaag 24316
>gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome Length = 1992676 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Plus Query: 406 tttcatcaatttgatcatcttc 427 |||||||||||||||||||||| Sbjct: 1582508 tttcatcaatttgatcatcttc 1582529
>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome Length = 3481691 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 602 ttgcttaatagccgcttcagc 622 ||||||||||||||||||||| Sbjct: 3361815 ttgcttaatagccgcttcagc 3361835 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,482,323 Number of Sequences: 3902068 Number of extensions: 6482323 Number of successful extensions: 105352 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 105165 Number of HSP's gapped (non-prelim): 183 length of query: 746 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 723 effective length of database: 17,143,297,704 effective search space: 12394604239992 effective search space used: 12394604239992 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 21 (42.1 bits)