>GLR31_ARATH (Q7XJL2) Glutamate receptor 3.1 precursor (Ligand-gated ion channel|
            3.1) (AtGLR2)
          Length = 921

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
 Frame = -1

Query: 671  ESDRLQVYSFSGLFLICGVACLVTLAIHAGILVHKYCEQQRQVSAE----GXXXXXXXSF 504
            +S++L V+SF G+FL+ G+ACLV L IH   ++  +C+   +V  E              
Sbjct: 819  DSEQLNVHSFWGMFLVVGIACLVALFIHFFKIIRDFCKDTPEVVVEEAIPSPKSSRLTKL 878

Query: 503  QAFLSFADRREMDTRIASKDK 441
            Q FL+F D +E +T+   K K
Sbjct: 879  QTFLAFVDEKEEETKRRLKRK 899

>GLR36_ARATH (Q84W41) Glutamate receptor 3.6 precursor (Ligand-gated ion channel|
            3.6)
          Length = 903

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
 Frame = -1

Query: 671  ESDRLQVYSFSGLFLICGVACLVTLAIHAGILVHKYCEQQRQVSAEGX---XXXXXXSFQ 501
            E DRL++ SF GLF++CGVAC++ LA++  +++ ++  QQ    AEG             
Sbjct: 810  EVDRLELKSFWGLFVVCGVACVLALAVYTVLMIRQF-GQQCPEEAEGSIRRRSSPSARIH 868

Query: 500  AFLSFADRREMDTRIAS 450
            +FLSF   +E D +  S
Sbjct: 869  SFLSFVKEKEEDAKARS 885

>GLR33_ARATH (Q9C8E7) Glutamate receptor 3.3 precursor (Ligand-gated ion channel|
            3.3)
          Length = 933

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
 Frame = -1

Query: 671  ESDRLQVYSFSGLFLICGVACLVTLAIHAGILVHKYCEQ-------QRQVSAEGXXXXXX 513
            ESDRL + SF GLFLICGVACL+ L ++   ++ +  ++       + Q           
Sbjct: 820  ESDRLHLKSFWGLFLICGVACLLALFLYFVQIIRQLYKKPTDDAIARDQQQNHDSSSMRS 879

Query: 512  XSFQAFLSFADRREMDTRIASKDK 441
               Q FLS  D +E     + K K
Sbjct: 880  TRLQRFLSLMDEKEESKHESKKRK 903

>GLR32_ARATH (Q93YT1) Glutamate receptor 3.2 precursor (Ligand-gated ion channel|
            3.2) (AtGluR2)
          Length = 912

 Score = 43.1 bits (100), Expect = 8e-04
 Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
 Frame = -1

Query: 671  ESDRLQVYSFSGLFLICGVACLVTLAIHAGILVH------KYCEQQRQVSAEGXXXXXXX 510
            +S++L++ SF GLFL+CG++C + L I+   +V       KY E+    S E        
Sbjct: 820  DSEQLKLRSFWGLFLVCGISCFIALFIYFFKIVRDFFRHGKYDEEATVPSPE---SSRSK 876

Query: 509  SFQAFLSFADRREMDTRIASKDK 441
            S Q FL++ D +E +++   K K
Sbjct: 877  SLQTFLAYFDEKEDESKRRMKRK 899

>GLR34_ARATH (Q8GXJ4) Glutamate receptor 3.4 precursor (Ligand-gated ion channel|
            3.4) (AtGLR4)
          Length = 959

 Score = 33.9 bits (76), Expect = 0.46
 Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 11/88 (12%)
 Frame = -1

Query: 671  ESDRLQVYSFSGLFLICGVACLVTLAIHAGILVHKYC---------EQQRQVS--AEGXX 525
            E  +L + SF GLFLICG+ C + L +    +  +Y          E+  +VS  +    
Sbjct: 849  EDSQLSLKSFWGLFLICGITCFMALTVFFWRVFWQYQRLLPESADEERAGEVSEPSRSGR 908

Query: 524  XXXXXSFQAFLSFADRREMDTRIASKDK 441
                 SF+  +   D+RE + +   K K
Sbjct: 909  GSRAPSFKELIKVVDKREAEIKEILKQK 936

>GLR35_ARATH (Q9SW97) Glutamate receptor 3.5 precursor (Ligand-gated ion channel|
            3.5) (Ionotropic glutamate receptor GLR6)
          Length = 953

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 11/88 (12%)
 Frame = -1

Query: 671  ESDRLQVYSFSGLFLICGVACLVTLAIHAGILVHKY----CEQQRQVSAEGXXXXX---- 516
            E+ ++ V SF GLFLICGV   + L +    +  +Y     E+  +V A           
Sbjct: 842  ENYQISVQSFWGLFLICGVVWFIALTLFCWKVFWQYQRLRPEESDEVQARSEEAGSSRGK 901

Query: 515  ---XXSFQAFLSFADRREMDTRIASKDK 441
                 SF+  +   D+RE + +   K+K
Sbjct: 902  SLRAVSFKDLIKVVDKREAEIKEMLKEK 929

>EGFL7_MOUSE (Q9QXT5) EGF-like domain-containing protein 7 precursor (Multiple|
           EGF-like domain protein 7) (Multiple epidermal growth
           factor-like domain protein 7) (Vascular endothelial
           statin) (VE-statin) (NOTCH4-like protein) (Zneu1)
          Length = 275

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 8/55 (14%)
 Frame = +2

Query: 401 YSTPRRRSGLLLPPCPWTLSGCPSPVGRRRTGRPGSC--------CGWSGSCLRP 541
           Y T  RRS  + P  P   + CP    +R +G PG+C        CG  GSC+RP
Sbjct: 70  YRTAYRRSPGVTPARP-RYACCPG--WKRTSGLPGACGAAICQPPCGNGGSCIRP 121

>EGFL7_RAT (Q6AZ60) EGF-like domain-containing protein 7 precursor (Multiple|
           EGF-like domain protein 7) (Multiple epidermal growth
           factor-like domain protein 7)
          Length = 279

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 9/68 (13%)
 Frame = +2

Query: 365 RLSSTTRRCWR-CYSTPRRRSGLLLPPCPWTLSGCPSPVGRRRTGRPGSC--------CG 517
           R  ST R  +R  Y    R S  L P  P   + CP    +R  G PG+C        CG
Sbjct: 61  RACSTYRTIYRTAYRIAYRHSPGLTPSRP-RYACCPG--WKRTNGLPGACGAAICQPPCG 117

Query: 518 WSGSCLRP 541
             GSC+RP
Sbjct: 118 NEGSCIRP 125

>SOX12_HUMAN (O15370) SOX-12 protein (SOX-22 protein)|
          Length = 315

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
 Frame = +2

Query: 344 GAVRPTVRLSSTTRRCWRC-YSTPRRRSGLLLPPC-PWTLSGCPSPVGRRRTGRPGSCCG 517
           G  RP   + +TTR CW+C +S PR  S      C  W+    P    R R   P     
Sbjct: 158 GRRRPRTTMKTTTRSCWKCAWSRPRGGS------CGGWSRRDGPLGDKRSRAQGPSGEGA 211

Query: 518 WSGSCLRPTPA 550
            + +   PTP+
Sbjct: 212 AAAAAASPTPS 222

>GLR28_ARATH (Q9C5V5) Glutamate receptor 2.8 precursor (Ligand-gated ion channel|
           2.8)
          Length = 947

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -1

Query: 668 SDRLQVYSFSGLFLICGVACLVTLAIHAGILVHK 567
           S+RL + SF GLFLI G+A  + L I   + +++
Sbjct: 809 SNRLSLRSFWGLFLIAGIASFLALLIFVFLFLYE 842

>TOP1_ARATH (P30181) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
          Length = 916

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = -1

Query: 233 ASPRAANVLSPRAAEL*RCVSCCAHGASYSASSRATVTSG 114
           A P+A NV+SPR+  + +        + YS SS+++ +SG
Sbjct: 326 AKPKARNVVSPRSRAMTKNTKKVTKDSKYSTSSKSSPSSG 365

>SEM4F_RAT (Q9Z143) Semaphorin-4F precursor (Semaphorin W) (Sema W)|
          Length = 776

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +2

Query: 413 RRRSGLLLPPCPWTLSGCPSPVGRRRTGRPGSCC 514
           +R SG    P P+ L  CPSP   R TG P + C
Sbjct: 738 KRGSGFGGFPPPFLLDSCPSPAHIRLTGAPLATC 771

>SEM4F_MOUSE (Q9Z123) Semaphorin-4F precursor (Semaphorin W) (Sema W)|
          Length = 777

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +2

Query: 413 RRRSGLLLPPCPWTLSGCPSPVGRRRTGRPGSCC 514
           +R SG    P P+ L  CPSP   R TG P + C
Sbjct: 739 KRGSGFGGFPPPFLLDSCPSPAHIRLTGAPLATC 772


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,505,322
Number of Sequences: 219361
Number of extensions: 1454067
Number of successful extensions: 4394
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4391
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6541540170
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)