| Clone Name | rbaal19j12 |
|---|---|
| Clone Library Name | barley_pub |
>PAO_ARATH (Q9FYC2) Pheophorbide a oxygenase, chloroplast precursor (EC| 1.-.-.-) (Pheide a oxygenase) (AtPaO) (Accelerated cell death 1) (Lethal leaf-spot 1 homolog) (Lls1) Length = 537 Score = 103 bits (257), Expect = 6e-22 Identities = 67/183 (36%), Positives = 96/183 (52%), Gaps = 11/183 (6%) Frame = -3 Query: 745 KVIPRWYYHIGQNAILDSDIYLLHIEERNFAAAGVEN--------WQKAVYVPTSSDNMV 590 +V+PRWY H N + D D+ +L +E+ F A +E+ + K + PT +D V Sbjct: 358 QVVPRWYEHWTSNLVYDGDMIVLQGQEKVFLAKSMESPDYDVNKQYTKLTFTPTQADRFV 417 Query: 589 IAFRNWFRKHCKSQVGW--AAPTIGQLPETP-TKDKLMERYWSHVAQCRSCSTALKTMKA 419 +AFRNW R+H KSQ W + P+ LP T TK ++++R+ H C SC A + + Sbjct: 418 LAFRNWLRRHGKSQPEWFGSTPSNQPLPSTVLTKRQMLDRFDQHTQVCSSCKGAYNSFQI 477 Query: 418 LEVALQVASVAVVGFLAVAKGTLVTSVVQRAAVVTLAVLCFAASRWLASFIEKNFYFQDY 239 L+ L A+V F A G V S VQ V+ L AAS + EKNF F+DY Sbjct: 478 LKKFLVGATV----FWAATAG--VPSDVQIRLVLAGLSLISAASAYALHEQEKNFVFRDY 531 Query: 238 VHA 230 VH+ Sbjct: 532 VHS 534
>MYO2_CAEEL (P12845) Myosin-2 (Myosin heavy chain C) (MHC C)| Length = 1947 Score = 35.4 bits (80), Expect = 0.19 Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 1/76 (1%) Frame = -2 Query: 641 RKLAESRVRADVVGQHGDRLQELVQKALQESGRLGRPDDRS-VTRDSNQRQAHGEVLVAR 465 +KL E A+ ++L+ + ++L++S + + R+ D N+R+A GE+ +A+ Sbjct: 1020 KKLTEDLQAAEEQNLAANKLKAKLMQSLEDSEQTMEREKRNRADMDKNKRKAEGELKIAQ 1079 Query: 464 RAVQELQHGAEDHESA 417 ++EL D E+A Sbjct: 1080 ETLEELNKSKSDAENA 1095
>RECX_DEIRA (Q9RUS2) Regulatory protein recX| Length = 204 Score = 32.3 bits (72), Expect = 1.6 Identities = 23/75 (30%), Positives = 39/75 (52%) Frame = -2 Query: 656 RCGGRRKLAESRVRADVVGQHGDRLQELVQKALQESGRLGRPDDRSVTRDSNQRQAHGEV 477 R G R + E+ +R + + D ELV++ L+ LG +D V R N+R+ GE+ Sbjct: 62 RALGARAITEAELRGKLERRSED--PELVEEVLRRVQELGYQNDAEVARAENKRRGVGEL 119 Query: 476 LVARRAVQELQHGAE 432 V R+ ++ GA+ Sbjct: 120 RV-RQTLRRRGLGAD 133
>FILA_HUMAN (P20930) Filaggrin| Length = 4061 Score = 32.0 bits (71), Expect = 2.1 Identities = 27/90 (30%), Positives = 39/90 (43%) Frame = -2 Query: 752 ARQGHTAVVLPHRPERYPGLRHLPPPHRGAQLRCGGRRKLAESRVRADVVGQHGDRLQEL 573 A GH+A R G RH A+ GG+ ++ + R+ +HG R Q+ Sbjct: 1641 ASHGHSA-----ESSRQSGTRH-------AETSSGGQAASSQEQARSSPGERHGSRHQQS 1688 Query: 572 VQKALQESGRLGRPDDRSVTRDSNQRQAHG 483 + +SG GR D SV DS R + G Sbjct: 1689 ADSS-TDSG-TGRRQDSSVVGDSGNRGSSG 1716
>MBN3_MOUSE (Q8R003) Muscleblind-like X-linked protein (Muscleblind-like| protein 3) (Cys3His CCG1-required protein) (MCHCR protein) Length = 342 Score = 31.6 bits (70), Expect = 2.7 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = -2 Query: 683 PPPHRGAQLRCGGRRKLAESRVRADVVGQHGDRLQELVQKALQES 549 PPPH +QL GR L + + A + QH +Q ++Q A S Sbjct: 72 PPPHLKSQLEVNGRNNLIQQKTAAAMFAQH---MQLMLQNAQMSS 113
>P2RY8_HUMAN (Q86VZ1) P2Y purinoceptor 8 (P2Y8)| Length = 359 Score = 30.4 bits (67), Expect = 6.1 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 3/38 (7%) Frame = -3 Query: 328 AAVVTLA-VLCFAASRW--LASFIEKNFYFQDYVHAYK 224 AAVV LA V CFA + + LA + + FY + Y H YK Sbjct: 239 AAVVLLAFVTCFAPNNFVLLAHIVSRLFYGKSYYHVYK 276
>OR6A2_HUMAN (O95222) Olfactory receptor 6A2 (Olfactory receptor 11-55)| (OR11-55) (hP2 olfactory receptor) Length = 327 Score = 30.4 bits (67), Expect = 6.1 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = -3 Query: 145 STLLYLIPIVAVYKATSLFSLFKPKPSSDFHSNQCVNAIYA 23 ST + +V ++ A S+F +PK S F +N+ V+ +YA Sbjct: 244 STCASHLTVVIIFYAASIFIYARPKALSAFDTNKLVSVLYA 284
>OL226_RAT (P23270) Olfactory receptor 226 (Olfactory receptor-like protein| I7) Length = 327 Score = 30.4 bits (67), Expect = 6.1 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = -3 Query: 145 STLLYLIPIVAVYKATSLFSLFKPKPSSDFHSNQCVNAIYA 23 ST + +V ++ A S+F +PK S F +N+ V+ +YA Sbjct: 244 STCASHLTVVIIFYAASIFIYARPKALSAFDTNKLVSVLYA 284 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 90,376,928 Number of Sequences: 219361 Number of extensions: 1767578 Number of successful extensions: 5905 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 5593 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5899 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 7902193040 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)