| Clone Name | rbaal6o20 |
|---|---|
| Clone Library Name | barley_pub |
>VWF_HUMAN (P04275) Von Willebrand factor precursor (vWF) [Contains: Von| Willebrand antigen II] Length = 2813 Score = 32.7 bits (73), Expect = 0.79 Identities = 19/60 (31%), Positives = 27/60 (45%) Frame = +1 Query: 289 SSFCNFLIVLLQLSCREQILSLTLHAFPPTDSSSNKCLSSPCTIHRYYQLLCRLTGPCVD 468 SS C L++ L C + + T +A DS + + C + Y LCR G CVD Sbjct: 2136 SSHCQVLLLPLFAECHKVLAPATFYAICQQDSCHQEQV---CEVIASYAHLCRTNGVCVD 2192
>VWF_MOUSE (Q8CIZ8) Von Willebrand factor precursor (vWF) [Contains: Von| Willebrand antigen II] Length = 2813 Score = 32.3 bits (72), Expect = 1.0 Identities = 28/90 (31%), Positives = 35/90 (38%), Gaps = 10/90 (11%) Frame = +1 Query: 289 SSFCNFLIVLLQLSCREQILSLTLHAFPPTDSSSNKCLSSPCTIHRYYQLLCRLTGPCVD 468 SS C L+ C + I T H DS + + C + Y LCR +G CVD Sbjct: 2136 SSHCQVLLSASFAECHKVIAPATFHTICQQDSCHQERV---CEVIASYAHLCRTSGVCVD 2192 Query: 469 ---T*VFAMKSPVLLLK-------PRHPAG 528 T AM P L+ PRH G Sbjct: 2193 WRTTDFCAMSCPPSLVYNHCERGCPRHCDG 2222
>VWF_CANFA (Q28295) Von Willebrand factor precursor (vWF)| Length = 2813 Score = 31.2 bits (69), Expect = 2.3 Identities = 20/61 (32%), Positives = 26/61 (42%) Frame = +1 Query: 286 TSSFCNFLIVLLQLSCREQILSLTLHAFPPTDSSSNKCLSSPCTIHRYYQLLCRLTGPCV 465 +SS C L+ L C + + T +A DS K + C Y LCR G CV Sbjct: 2135 SSSHCQVLLSELFAECHKVLAPATFYAMCQPDSCHPKKV---CEAIALYAHLCRTKGVCV 2191 Query: 466 D 468 D Sbjct: 2192 D 2192
>TNR6A_HUMAN (Q8NDV7) Trinucleotide repeat-containing gene 6A protein (CAG repeat| protein 26) (Glycin-tryptophan protein of 182 kDa) (GW182 autoantigen) (GW1 protein) (EMSY interactor protein) Length = 1962 Score = 30.4 bits (67), Expect = 3.9 Identities = 24/78 (30%), Positives = 38/78 (48%) Frame = -2 Query: 582 GLGSLQQLWVGDDMQEVSSRWVPGLQEQHRRLHGEDLGIYTWTS*TAQELIISVNGAR** 403 G S+Q W GDDM +R G +E+ ED+ I W S ++QEL S+N Sbjct: 1118 GPKSMQDGWCGDDMPLPGNR-PTGWEEE------EDVEIGMWNSNSSQELNSSLNWPPYT 1170 Query: 402 QALVRGAICGRKSVKGKG 349 + + + G+K + +G Sbjct: 1171 KKMSSKGLSGKKRRRERG 1188
>TSN10_HUMAN (Q9H1Z9) Tetraspanin-10 (Tspan-10) (Oculospanin)| Length = 355 Score = 30.4 bits (67), Expect = 3.9 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = +3 Query: 504 LEAQAPSGKRPLAYHRPPTTAANCPAP 584 L +Q +G++PL+ HRPPT+ P P Sbjct: 9 LLSQETAGQKPLSVHRPPTSGCLGPVP 35
>NUD17_HUMAN (P0C025) Putative nucleoside diphosphate-linked moiety X motif 17,| mitochondrial precursor (EC 3.6.1.-) (Nudix motif 17) Length = 295 Score = 29.3 bits (64), Expect = 8.7 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = -1 Query: 526 PLGAWASRAAPATSWRRPRYLHM 458 PLG W S P SW P+Y H+ Sbjct: 160 PLGLWESAYPPRLSWGLPKYHHI 182 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 86,015,862 Number of Sequences: 219361 Number of extensions: 1698812 Number of successful extensions: 4064 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 3926 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4063 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5044307840 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)