ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal19i19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KPYC_SOYBN (Q42806) Pyruvate kinase, cytosolic isozyme (EC 2.7.1... 38 0.021
2KPYC_TOBAC (Q42954) Pyruvate kinase, cytosolic isozyme (EC 2.7.1... 37 0.062
3KPYC_ARATH (O65595) Probable pyruvate kinase, cytosolic isozyme ... 36 0.081
4KPYC_SOLTU (P22200) Pyruvate kinase, cytosolic isozyme (EC 2.7.1... 35 0.14
5TOP2A_PHONI (P81790) Omega-phonetoxin-2A (Omega-phonetoxin-IIA) ... 32 1.5
6ZNF84_HUMAN (P51523) Zinc finger protein 84 (Zinc finger protein... 30 5.8
7ZG5_XENLA (P18725) Gastrula zinc finger protein 5-1 (XLCGF5.1) 30 7.6
8Y177_TREPA (O83207) Hypothetical protein TP0177 30 7.6
9SC160_YEAST (P06105) Protein SCP160 (Protein HX) 30 7.6
10ZN250_HUMAN (P15622) Zinc finger protein 250 (Zinc finger protei... 29 10.0
11ZN250_MOUSE (Q7TNU6) Zinc finger protein 250 (Zinc finger protei... 29 10.0
12ZG57_XENLA (P18729) Gastrula zinc finger protein XLCGF57.1 (Frag... 29 10.0

>KPYC_SOYBN (Q42806) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK)|
          Length = 511

 Score = 38.1 bits (87), Expect = 0.021
 Identities = 29/92 (31%), Positives = 36/92 (39%)
 Frame = +3

Query: 48  VRSAMKVKAAAIVVFTFSGRAARCFIPHKINT*LYVLSCKCHHLT*YIVFCRLVAKYRPP 227
           VR+A K KA  IVV T  G  A+                             LVAKYRP 
Sbjct: 388 VRTANKAKAKLIVVLTRGGSTAK-----------------------------LVAKYRPA 418

Query: 228 MPVLAVVFPREGSDPSKWRSYGTTQVSNMHIY 323
           +P+L+VV P   +D   W     T   +  IY
Sbjct: 419 VPILSVVVPVLSTDSFDWTCSDETPARHSLIY 450



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>KPYC_TOBAC (Q42954) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK)|
          Length = 508

 Score = 36.6 bits (83), Expect = 0.062
 Identities = 26/78 (33%), Positives = 32/78 (41%)
 Frame = +3

Query: 48  VRSAMKVKAAAIVVFTFSGRAARCFIPHKINT*LYVLSCKCHHLT*YIVFCRLVAKYRPP 227
           VR+A   KAA I+V T  G  A+                             LVAKYRP 
Sbjct: 385 VRTANSAKAALILVLTRGGSTAK-----------------------------LVAKYRPG 415

Query: 228 MPVLAVVFPREGSDPSKW 281
           MP+L+VV P   +D   W
Sbjct: 416 MPILSVVVPEIKTDSFDW 433



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>KPYC_ARATH (O65595) Probable pyruvate kinase, cytosolic isozyme (EC 2.7.1.40)|
           (PK)
          Length = 497

 Score = 36.2 bits (82), Expect = 0.081
 Identities = 18/41 (43%), Positives = 22/41 (53%)
 Frame = +3

Query: 201 RLVAKYRPPMPVLAVVFPREGSDPSKWRSYGTTQVSNMHIY 323
           RLVAKYRP +P+L+VV P   SD   W         +  IY
Sbjct: 396 RLVAKYRPGIPILSVVVPEITSDSFDWACSNEAPARHSLIY 436



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>KPYC_SOLTU (P22200) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK)|
          Length = 510

 Score = 35.4 bits (80), Expect = 0.14
 Identities = 27/92 (29%), Positives = 36/92 (39%)
 Frame = +3

Query: 48  VRSAMKVKAAAIVVFTFSGRAARCFIPHKINT*LYVLSCKCHHLT*YIVFCRLVAKYRPP 227
           VR+A K +A  IVV T  G  A+                             LVAKYRP 
Sbjct: 387 VRTANKARAKLIVVLTRGGSTAK-----------------------------LVAKYRPA 417

Query: 228 MPVLAVVFPREGSDPSKWRSYGTTQVSNMHIY 323
           +P+L+VV P   +D   W     T   +  +Y
Sbjct: 418 VPILSVVVPVLTTDSFDWSISDETPARHSLVY 449



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>TOP2A_PHONI (P81790) Omega-phonetoxin-2A (Omega-phonetoxin-IIA) (Omega-Ptx-IIA)|
           (Neurotoxin Tx3-4)
          Length = 76

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 35  CLHIGSFCNESKSCCDCCVHLLRESCQVLY 124
           C+++G FC+  K  C CC      SC V++
Sbjct: 2   CINVGDFCDGKKDDCQCCRDNAFCSCSVIF 31



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>ZNF84_HUMAN (P51523) Zinc finger protein 84 (Zinc finger protein HPF2)|
          Length = 738

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +2

Query: 293 HNAGK*HAYLSICT*FSLKGSIYLHLLTVTGEAMFFCERC 412
           H   K H  +     FS K  +  H +T TGE  F C +C
Sbjct: 425 HTGEKPHGCIQCGKAFSQKSHLISHQMTHTGEKPFICSKC 464



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>ZG5_XENLA (P18725) Gastrula zinc finger protein 5-1 (XLCGF5.1)|
          Length = 445

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 338 FSLKGSIYLHLLTVTGEAMFFCERC 412
           F+LK S++ H  T TGE  F C +C
Sbjct: 360 FTLKDSLHRHQRTHTGEKPFICSQC 384



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>Y177_TREPA (O83207) Hypothetical protein TP0177|
          Length = 436

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +3

Query: 210 AKYRPPMPVLAVVFPREGSDPSKWRSYGTTQVSNMHIYLSVHDFL 344
           A++ PP P L V+FP E   P +   Y    + N H + + H FL
Sbjct: 179 AEHFPPAPTLPVLFPLEACIPPRVFKYSPISLLNYHSH-TEHFFL 222



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>SC160_YEAST (P06105) Protein SCP160 (Protein HX)|
          Length = 1222

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 15/44 (34%), Positives = 26/44 (59%)
 Frame = -3

Query: 473 DSGIAK*MHTYLVSTPHQRVHTSHRKTLPRL*QSVNVSIWIPSK 342
           +S ++K   T+LVS     VH + R+ + +L + +N  I +PSK
Sbjct: 144 ESTLSKNARTFLVSGVAANVHEAKRELVKKLTKPINAVIEVPSK 187



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>ZN250_HUMAN (P15622) Zinc finger protein 250 (Zinc finger protein 647)|
          Length = 560

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 338 FSLKGSIYLHLLTVTGEAMFFCERC 412
           FSLK ++ +HL T TGE  + C  C
Sbjct: 488 FSLKATLIVHLRTHTGEKPYECNSC 512



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>ZN250_MOUSE (Q7TNU6) Zinc finger protein 250 (Zinc finger protein 647)|
          Length = 535

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 338 FSLKGSIYLHLLTVTGEAMFFCERC 412
           FSLK ++ +HL T TGE  + C  C
Sbjct: 463 FSLKATLIVHLRTHTGEKPYECNSC 487



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>ZG57_XENLA (P18729) Gastrula zinc finger protein XLCGF57.1 (Fragment)|
          Length = 336

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 338 FSLKGSIYLHLLTVTGEAMFFCERC 412
           F+LKG++ LH    TGE  F C +C
Sbjct: 267 FALKGNLVLHTKIHTGEKPFSCTQC 291


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,828,666
Number of Sequences: 219361
Number of extensions: 1795724
Number of successful extensions: 4761
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4761
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5767334219
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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