ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal7d19 |
|---|---|
| Clone Library Name | barley_pub |
>Y1964_AQUAE (O67776) Hypothetical zinc metalloprotease aq_1964 (EC 3.4.24.-)| Length = 429 Score = 37.0 bits (84), Expect = 0.055 Identities = 17/36 (47%), Positives = 25/36 (69%) Frame = -2 Query: 674 IVEQVSKGSNAEKIGIREGDVIESFNGKYVSTTIEL 567 +V V KGS A+++GI+ GD+I NGK ++T EL Sbjct: 210 VVGGVKKGSPADQVGIKPGDLILEVNGKKINTWYEL 245 Score = 33.5 bits (75), Expect = 0.61 Identities = 19/47 (40%), Positives = 26/47 (55%) Frame = -2 Query: 677 LIVEQVSKGSNAEKIGIREGDVIESFNGKYVSTTIELEQMLIDICWD 537 ++V V + S A+KIGI+ GD I NG V T +L LI + D Sbjct: 124 VVVGYVQRDSIAQKIGIKPGDKIIKINGYEVRTWEDLRDALIRLSLD 170
>DEGP_CHLTR (P18584) Probable serine protease do-like precursor (EC 3.4.21.-)| (59 kDa immunogenic protein) (SK59) Length = 497 Score = 36.6 bits (83), Expect = 0.072 Identities = 18/40 (45%), Positives = 25/40 (62%) Frame = -2 Query: 674 IVEQVSKGSNAEKIGIREGDVIESFNGKYVSTTIELEQML 555 +V V KGS AEK G+R+ DVI ++NGK V + L + Sbjct: 326 LVTDVVKGSPAEKAGLRQEDVIVAYNGKEVESLSALRNAI 365
>DEGP_CHLMU (Q9PL97) Probable serine protease do-like precursor (EC 3.4.21.-)| Length = 497 Score = 36.2 bits (82), Expect = 0.094 Identities = 17/40 (42%), Positives = 25/40 (62%) Frame = -2 Query: 674 IVEQVSKGSNAEKIGIREGDVIESFNGKYVSTTIELEQML 555 ++ V KGS AEK G+R+ DVI ++NGK V + L + Sbjct: 326 LITDVVKGSPAEKAGLRQEDVIVAYNGKEVESLSALRNAI 365
>YVTA_BACSU (Q9R9I1) Probable serine protease yvtA (EC 3.4.21.-)| Length = 458 Score = 35.4 bits (80), Expect = 0.16 Identities = 17/39 (43%), Positives = 25/39 (64%) Frame = -2 Query: 671 VEQVSKGSNAEKIGIREGDVIESFNGKYVSTTIELEQML 555 V++V S AEK GI+ DVI NGK V ++ ++ Q+L Sbjct: 384 VKEVQANSPAEKAGIKSEDVIVKLNGKDVESSADIRQIL 422
>DEGP_SALTY (P26982) Protease do precursor (EC 3.4.21.-)| Length = 475 Score = 35.0 bits (79), Expect = 0.21 Identities = 17/31 (54%), Positives = 21/31 (67%) Frame = -2 Query: 671 VEQVSKGSNAEKIGIREGDVIESFNGKYVST 579 V QV S+A K GI+ GDVI S NGK +S+ Sbjct: 317 VSQVMPNSSAAKAGIKAGDVITSLNGKPISS 347 Score = 30.0 bits (66), Expect = 6.7 Identities = 15/41 (36%), Positives = 24/41 (58%) Frame = -2 Query: 677 LIVEQVSKGSNAEKIGIREGDVIESFNGKYVSTTIELEQML 555 ++V V S A +IG+++GDVI N + V EL ++L Sbjct: 412 VVVSSVKANSPAAQIGLKKGDVIIGANQQPVKNIAELRKIL 452
>DEGP_ECOLI (P0C0V0) Protease do precursor (EC 3.4.21.-)| Length = 474 Score = 34.7 bits (78), Expect = 0.27 Identities = 17/31 (54%), Positives = 21/31 (67%) Frame = -2 Query: 671 VEQVSKGSNAEKIGIREGDVIESFNGKYVST 579 V QV S+A K GI+ GDVI S NGK +S+ Sbjct: 316 VSQVLPNSSAAKAGIKAGDVITSLNGKPISS 346 Score = 31.6 bits (70), Expect = 2.3 Identities = 15/41 (36%), Positives = 25/41 (60%) Frame = -2 Query: 677 LIVEQVSKGSNAEKIGIREGDVIESFNGKYVSTTIELEQML 555 ++V V G+ A +IG+++GDVI N + V EL ++L Sbjct: 411 VVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKVL 451
>DEGP_ECO57 (P0C0V1) Protease do precursor (EC 3.4.21.-)| Length = 474 Score = 34.7 bits (78), Expect = 0.27 Identities = 17/31 (54%), Positives = 21/31 (67%) Frame = -2 Query: 671 VEQVSKGSNAEKIGIREGDVIESFNGKYVST 579 V QV S+A K GI+ GDVI S NGK +S+ Sbjct: 316 VSQVLPNSSAAKAGIKAGDVITSLNGKPISS 346 Score = 31.6 bits (70), Expect = 2.3 Identities = 15/41 (36%), Positives = 25/41 (60%) Frame = -2 Query: 677 LIVEQVSKGSNAEKIGIREGDVIESFNGKYVSTTIELEQML 555 ++V V G+ A +IG+++GDVI N + V EL ++L Sbjct: 411 VVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKVL 451
>DEGQ_ECOLI (P39099) Protease degQ precursor (EC 3.4.21.-)| Length = 455 Score = 34.3 bits (77), Expect = 0.36 Identities = 15/39 (38%), Positives = 24/39 (61%) Frame = -2 Query: 671 VEQVSKGSNAEKIGIREGDVIESFNGKYVSTTIELEQML 555 V +V GS + K G++ GD+I S NGK +++ EL + Sbjct: 294 VSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRI 332
>HTRA_BACSU (O34358) Probable serine protease do-like htrA (EC 3.4.21.-)| Length = 449 Score = 33.5 bits (75), Expect = 0.61 Identities = 15/39 (38%), Positives = 23/39 (58%) Frame = -2 Query: 671 VEQVSKGSNAEKIGIREGDVIESFNGKYVSTTIELEQML 555 + +V+ GS AEK G++ D+I GK + T EL +L Sbjct: 376 IREVASGSPAEKAGLKAEDIIIGLKGKEIDTGSELRNIL 414
>DEGP_CHLPN (Q9Z6T0) Probable serine protease do-like precursor (EC 3.4.21.-)| Length = 488 Score = 33.5 bits (75), Expect = 0.61 Identities = 15/32 (46%), Positives = 23/32 (71%) Frame = -2 Query: 674 IVEQVSKGSNAEKIGIREGDVIESFNGKYVST 579 +V V KGS A+K G+++ DVI ++NGK V + Sbjct: 317 LVTDVVKGSPADKAGLKQEDVIIAYNGKEVDS 348
>Y161_RICPR (Q9ZE02) Hypothetical zinc metalloprotease RP161 (EC 3.4.24.-)| Length = 359 Score = 33.1 bits (74), Expect = 0.80 Identities = 14/41 (34%), Positives = 25/41 (60%) Frame = -2 Query: 674 IVEQVSKGSNAEKIGIREGDVIESFNGKYVSTTIELEQMLI 552 I+ V S AE+ G++EGD I N KYV +++++ ++ Sbjct: 132 IIGDVVAASPAERAGLKEGDKIVKVNNKYVKDFVDVQKEIL 172
>Y1507_DEIRA (Q9RU85) Hypothetical zinc metalloprotease DR1507 (EC 3.4.24.-)| Length = 377 Score = 32.0 bits (71), Expect = 1.8 Identities = 13/32 (40%), Positives = 21/32 (65%) Frame = -2 Query: 671 VEQVSKGSNAEKIGIREGDVIESFNGKYVSTT 576 +E V GS A+ +G+R GDVI + +G+ + T Sbjct: 143 IESVETGSRAQALGLRAGDVITAIDGQDIPET 174
>HTOA_HAEIN (P45129) Probable periplasmic serine protease do/hhoA-like| precursor (EC 3.4.21.-) Length = 466 Score = 32.0 bits (71), Expect = 1.8 Identities = 14/35 (40%), Positives = 23/35 (65%) Frame = -2 Query: 671 VEQVSKGSNAEKIGIREGDVIESFNGKYVSTTIEL 567 V +V S AEK G++ GD+I + NG+ +S+ E+ Sbjct: 306 VSEVLPKSAAEKAGLKAGDIITAMNGQKISSFAEI 340
>HTRA4_HUMAN (P83105) Probable serine protease HTRA4 precursor (EC 3.4.21.-)| Length = 476 Score = 32.0 bits (71), Expect = 1.8 Identities = 14/37 (37%), Positives = 26/37 (70%) Frame = -2 Query: 665 QVSKGSNAEKIGIREGDVIESFNGKYVSTTIELEQML 555 +V +G+ A+ G+R+ DVI + NGK ++TT ++ + L Sbjct: 414 KVVEGTAAQSSGLRDHDVIVNINGKPITTTTDVVKAL 450
>Y890_THEMA (Q9WZZ2) Hypothetical zinc metalloprotease TM0890 (EC 3.4.24.-)| Length = 501 Score = 31.6 bits (70), Expect = 2.3 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = -2 Query: 671 VEQVSKGSNAEKIGIREGDVIESFNGKYVSTT 576 +++V GS AE+ G+R GD+I S N K T Sbjct: 125 IDEVVPGSPAEEAGLRRGDIIYSINDKIAFDT 156
>CTPAL_STAAW (Q8NWR2) Probable ctpA-like serine protease (EC 3.4.21.-)| Length = 496 Score = 31.6 bits (70), Expect = 2.3 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%) Frame = -2 Query: 677 LIVEQVSKGSNAEKIGIREGDVIESFNGKYVSTTIELEQMLIDICWDHFHQGKCLY---- 510 ++V KGS AE+ GIR DVI NGK + L++++ D+ + Sbjct: 149 IMVTSPMKGSPAERAGIRPKDVITKVNGKSIKGK-ALDEVVKDVRGKENTEVTLTVQRGS 207 Query: 509 EEKDVSVK 486 EEKDV +K Sbjct: 208 EEKDVKIK 215
>CTPAL_STAAS (Q6G9E1) Probable ctpA-like serine protease (EC 3.4.21.-)| Length = 496 Score = 31.6 bits (70), Expect = 2.3 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%) Frame = -2 Query: 677 LIVEQVSKGSNAEKIGIREGDVIESFNGKYVSTTIELEQMLIDICWDHFHQGKCLY---- 510 ++V KGS AE+ GIR DVI NGK + L++++ D+ + Sbjct: 149 IMVTSPMKGSPAERAGIRPKDVITKVNGKSIKGK-ALDEVVKDVRGKENTEVTLTVQRGS 207 Query: 509 EEKDVSVK 486 EEKDV +K Sbjct: 208 EEKDVKIK 215
>CTPAL_STAAR (Q6GGY8) Probable ctpA-like serine protease (EC 3.4.21.-)| Length = 496 Score = 31.6 bits (70), Expect = 2.3 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%) Frame = -2 Query: 677 LIVEQVSKGSNAEKIGIREGDVIESFNGKYVSTTIELEQMLIDICWDHFHQGKCLY---- 510 ++V KGS AE+ GIR DVI NGK + L++++ D+ + Sbjct: 149 IMVTSPMKGSPAERAGIRPKDVITKVNGKSIKGK-ALDEVVKDVRGKENTEVTLTVQRGS 207 Query: 509 EEKDVSVK 486 EEKDV +K Sbjct: 208 EEKDVKIK 215
>CTPAL_STAAN (Q7A5M9) Probable ctpA-like serine protease (EC 3.4.21.-)| Length = 496 Score = 31.6 bits (70), Expect = 2.3 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%) Frame = -2 Query: 677 LIVEQVSKGSNAEKIGIREGDVIESFNGKYVSTTIELEQMLIDICWDHFHQGKCLY---- 510 ++V KGS AE+ GIR DVI NGK + L++++ D+ + Sbjct: 149 IMVTSPMKGSPAERAGIRPKDVITKVNGKSIKGK-ALDEVVKDVRGKENTEVTLTVQRGS 207 Query: 509 EEKDVSVK 486 EEKDV +K Sbjct: 208 EEKDVKIK 215
>CTPAL_STAAM (Q99U67) Probable ctpA-like serine protease (EC 3.4.21.-)| Length = 496 Score = 31.6 bits (70), Expect = 2.3 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%) Frame = -2 Query: 677 LIVEQVSKGSNAEKIGIREGDVIESFNGKYVSTTIELEQMLIDICWDHFHQGKCLY---- 510 ++V KGS AE+ GIR DVI NGK + L++++ D+ + Sbjct: 149 IMVTSPMKGSPAERAGIRPKDVITKVNGKSIKGK-ALDEVVKDVRGKENTEVTLTVQRGS 207 Query: 509 EEKDVSVK 486 EEKDV +K Sbjct: 208 EEKDVKIK 215
>CTPAL_STAAC (Q5HG01) Probable ctpA-like serine protease (EC 3.4.21.-)| Length = 496 Score = 31.6 bits (70), Expect = 2.3 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%) Frame = -2 Query: 677 LIVEQVSKGSNAEKIGIREGDVIESFNGKYVSTTIELEQMLIDICWDHFHQGKCLY---- 510 ++V KGS AE+ GIR DVI NGK + L++++ D+ + Sbjct: 149 IMVTSPMKGSPAERAGIRPKDVITKVNGKSIKGK-ALDEVVKDVRGKENTEVTLTVQRGS 207 Query: 509 EEKDVSVK 486 EEKDV +K Sbjct: 208 EEKDVKIK 215
>CTPAL_STAAB (Q2YXZ9) Probable ctpA-like serine protease (EC 3.4.21.-)| Length = 496 Score = 31.6 bits (70), Expect = 2.3 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%) Frame = -2 Query: 677 LIVEQVSKGSNAEKIGIREGDVIESFNGKYVSTTIELEQMLIDICWDHFHQGKCLY---- 510 ++V KGS AE+ GIR DVI NGK + L++++ D+ + Sbjct: 149 IMVTSPMKGSPAERAGIRPKDVITKVNGKSIKGK-ALDEVVKDVRGKENTEVTLTVQRGS 207 Query: 509 EEKDVSVK 486 EEKDV +K Sbjct: 208 EEKDVKIK 215
>HTRA3_MOUSE (Q9D236) Probable serine protease HTRA3 precursor (EC 3.4.21.-)| (High-temperature requirement factor A3) (Pregnancy-related serine protease) (Toll-associated serine protease) Length = 459 Score = 31.2 bits (69), Expect = 3.0 Identities = 12/43 (27%), Positives = 30/43 (69%) Frame = -2 Query: 677 LIVEQVSKGSNAEKIGIREGDVIESFNGKYVSTTIELEQMLID 549 + V++V S +++ GI++GD+I NG+ ++ + EL++ +++ Sbjct: 392 IYVQEVVPNSPSQRGGIQDGDIIVKVNGRPLADSSELQEAVLN 434
>GR61A_DROME (Q9W0M2) Putative gustatory receptor 61a| Length = 436 Score = 31.2 bits (69), Expect = 3.0 Identities = 15/49 (30%), Positives = 25/49 (51%) Frame = +2 Query: 83 QLCTNFSTKLVAISNLAYRFCSARKYILCALS*AASTVQRHPQFKVFVW 229 +LC S ++SN+ + C+ Y++C + A T RHP V+ W Sbjct: 290 RLCELASLVEASMSNIVFVSCANNVYVICNQALAIFTKLRHPINYVYFW 338
>PDZK1_RABIT (Q865P3) PDZ domain-containing protein 1 (CFTR-associated protein| of 70 kDa) (Na(+)/H(+) exchanger regulatory factor 3) (Sodium-hydrogen exchanger regulatory factor 3) Length = 518 Score = 31.2 bits (69), Expect = 3.0 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = -2 Query: 674 IVEQVSKGSNAEKIGIREGDVIESFNGKYV 585 +V + KGS AEK G+++GD + NG +V Sbjct: 34 LVRVIEKGSPAEKAGLQDGDRVLRINGVFV 63
>HTRA3_HUMAN (P83110) Probable serine protease HTRA3 precursor (EC 3.4.21.-)| (High-temperature requirement factor A3) (Pregnancy-related serine protease) Length = 453 Score = 30.8 bits (68), Expect = 4.0 Identities = 12/42 (28%), Positives = 29/42 (69%) Frame = -2 Query: 677 LIVEQVSKGSNAEKIGIREGDVIESFNGKYVSTTIELEQMLI 552 + V++V+ S +++ GI++GD+I NG+ + + EL++ ++ Sbjct: 386 IYVQEVAPNSPSQRGGIQDGDIIVKVNGRPLVDSSELQEAVL 427
>DEGP_RICCN (Q92JA1) Probable serine protease do-like precursor (EC 3.4.21.-)| Length = 508 Score = 30.8 bits (68), Expect = 4.0 Identities = 18/65 (27%), Positives = 34/65 (52%) Frame = -2 Query: 677 LIVEQVSKGSNAEKIGIREGDVIESFNGKYVSTTIELEQMLIDICWDHFHQGKCLYEEKD 498 ++V +V + +K GI+ GD+I F V T +L ++ D D + K L ++K+ Sbjct: 320 VLVAKVQEDGPGDKAGIKTGDIIIEFADIPVKNTKKLRVIIADAPIDQEVKVKILRDKKE 379 Query: 497 VSVKI 483 + + I Sbjct: 380 LELPI 384
>DEGP_RHIME (Q52894) Probable serine protease do-like precursor (EC 3.4.21.-)| Length = 504 Score = 30.0 bits (66), Expect = 6.7 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = -2 Query: 674 IVEQVSKGSNAEKIGIREGDVIESFNGKYVSTTIEL 567 +V + GS EK GI+ GDV+ + NG+ V +L Sbjct: 323 LVVEPQAGSPGEKAGIKNGDVVTALNGEPVKDPRDL 358
>MAST3_HUMAN (O60307) Microtubule-associated serine/threonine-protein kinase 3 (EC| 2.7.11.1) Length = 1309 Score = 29.6 bits (65), Expect = 8.8 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = -2 Query: 674 IVEQVSKGSNAEKIGIREGDVIESFNGKYVSTTIELE 564 +V V GS A++ G+R GD+I NG+ V + ++ Sbjct: 982 VVWSVEDGSPAQEAGLRAGDLITHINGESVLGLVHMD 1018
>DEGP_RICPR (O05942) Probable serine protease do-like precursor (EC 3.4.21.-)| Length = 513 Score = 29.6 bits (65), Expect = 8.8 Identities = 13/43 (30%), Positives = 24/43 (55%) Frame = -2 Query: 677 LIVEQVSKGSNAEKIGIREGDVIESFNGKYVSTTIELEQMLID 549 ++V +V + K GI++GD+I F + V T +L ++ D Sbjct: 325 VLVSKVQENGPGYKAGIKKGDIIIKFGDRLVKNTKKLRVIIAD 367
>DEGP_BRUSU (P0A3Z5) Probable serine protease do-like precursor (EC 3.4.21.-)| Length = 513 Score = 29.6 bits (65), Expect = 8.8 Identities = 15/41 (36%), Positives = 23/41 (56%) Frame = -2 Query: 677 LIVEQVSKGSNAEKIGIREGDVIESFNGKYVSTTIELEQML 555 ++V V S+A GIR GDVI S N + V T ++ + + Sbjct: 442 VVVTDVDPDSDAADRGIRSGDVIVSVNNQTVKTAGDINKAI 482
>DEGP_BRUME (Q8YG32) Probable serine protease do-like precursor (EC 3.4.21.-)| Length = 513 Score = 29.6 bits (65), Expect = 8.8 Identities = 15/41 (36%), Positives = 23/41 (56%) Frame = -2 Query: 677 LIVEQVSKGSNAEKIGIREGDVIESFNGKYVSTTIELEQML 555 ++V V S+A GIR GDVI S N + V T ++ + + Sbjct: 442 VVVTDVDPDSDAADRGIRSGDVIVSVNNQTVKTAGDINKAI 482
>DEGP_BRUAB (P0C114) Probable serine protease do-like precursor (EC 3.4.21.-)| Length = 513 Score = 29.6 bits (65), Expect = 8.8 Identities = 15/41 (36%), Positives = 23/41 (56%) Frame = -2 Query: 677 LIVEQVSKGSNAEKIGIREGDVIESFNGKYVSTTIELEQML 555 ++V V S+A GIR GDVI S N + V T ++ + + Sbjct: 442 VVVTDVDPDSDAADRGIRSGDVIVSVNNQTVKTAGDINKAI 482
>DEGP_BRUA2 (Q2YMX6) Probable serine protease do-like precursor (EC 3.4.21.-)| Length = 513 Score = 29.6 bits (65), Expect = 8.8 Identities = 15/41 (36%), Positives = 23/41 (56%) Frame = -2 Query: 677 LIVEQVSKGSNAEKIGIREGDVIESFNGKYVSTTIELEQML 555 ++V V S+A GIR GDVI S N + V T ++ + + Sbjct: 442 VVVTDVDPDSDAADRGIRSGDVIVSVNNQTVKTAGDINKAI 482 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,592,059 Number of Sequences: 219361 Number of extensions: 1791824 Number of successful extensions: 4277 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 4174 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4276 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6655306086 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
