ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal7d19 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 97.6 bits (49), Expect = 5e-17 Identities = 58/61 (95%) Strand = Plus / Minus Query: 51 taagtactccatccatcccaaattaagtgactcaactttgtactaactttagtacaaagt 110 |||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 108677 taagtactccctccgtcccaaattaagtgactcaactttatactaactttagtacaaagt 108618 Query: 111 t 111 | Sbjct: 108617 t 108617 Score = 60.0 bits (30), Expect = 1e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 66 tcccaaattaagtgactcaactttgtactaactttagtacaaagtt 111 ||||||| ||||||||||||||||||||||| |||||| |||||| Sbjct: 108599 tcccaaaataagtgactcaactttgtactaaagttagtataaagtt 108644
>gb|AY821694.1| Crithopsis delileana beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1521 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Plus Query: 55 tactccatccatcccaaattaagtgactcaactttgtactaactttagtacaaagtt 111 |||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 1201 tactccctccatcccaaaataagtgtctcaactttgtactaactttagtacaaagtt 1257 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 83 caactttgtactaactttagtacaaagtt 111 |||||||||||||| ||||||||||||| Sbjct: 1258 caactttgtactaaagttagtacaaagtt 1230
>gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 complete sequence Length = 168746 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 55 tactccatccatcccaaattaagtgactcaactttgtactaactttagtacaaagtt 111 |||||| ||||| ||||| || |||||||||||||||||||||||||||||||||| Sbjct: 128596 tactccctccattccaaaatagatgactcaactttgtactaactttagtacaaagtt 128652 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 55 tactccatccatcccaaattaagtgactcaactttgtactaactttagtacaaagtt 111 |||||| ||| ||||||| ||| || ||||| ||||||||||||||||||||||||| Sbjct: 78751 tactccctccgtcccaaaataactgtctcaagtttgtactaactttagtacaaagtt 78695 Score = 48.1 bits (24), Expect = 0.038 Identities = 51/60 (85%) Strand = Plus / Minus Query: 52 aagtactccatccatcccaaattaagtgactcaactttgtactaactttagtacaaagtt 111 ||||||| | ||||| ||||| || |||| |||||||||||||| ||||||||||||| Sbjct: 128684 aagtacttcctccattccaaaatagatgacccaactttgtactaaagttagtacaaagtt 128625 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 81 ctcaactttgtactaactttagtacaaagtt 111 |||||||||||||||| |||||| ||||||| Sbjct: 78677 ctcaactttgtactaaatttagtgcaaagtt 78647 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 83 caactttgtactaactttagtacaaagtt 111 |||||||| ||||| |||||||||||||| Sbjct: 78646 caactttgcactaaatttagtacaaagtt 78674
>gb|AF325197.1|AF325197 Triticum aestivum LRK33 (Lrk33) and TAK33 (Tak33) genes, complete cds Length = 20754 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 78 tgactcaactttgtactaactttagtacaaagtt 111 |||||||||||||||||||||||||||||||||| Sbjct: 3666 tgactcaactttgtactaactttagtacaaagtt 3699 Score = 44.1 bits (22), Expect = 0.59 Identities = 31/34 (91%) Strand = Plus / Minus Query: 78 tgactcaactttgtactaactttagtacaaagtt 111 |||| |||||||||||||| ||||||||||||| Sbjct: 3705 tgacccaactttgtactaaagttagtacaaagtt 3672
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 55 tactccatccatcccaaattaagtgactcaactttgtactaactttagtacaaagtt 111 |||||| ||| ||||||| ||||||||||||||||||||||| ||||| ||||||| Sbjct: 81478 tactccctccgtcccaaaataagtgactcaactttgtactaaagttagtgcaaagtt 81534 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 79 gactcaactttgtactaactttagtacaaagtt 111 |||||||||||| |||||||||||||||||||| Sbjct: 81539 gactcaactttgcactaactttagtacaaagtt 81507 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 81 ctcaactttgtactaactttagtacaaagtt 111 ||||||||||||||| || |||||||||||| Sbjct: 206048 ctcaactttgtactagctctagtacaaagtt 206078
>gb|AF497474.1| Aegilops tauschii leucine-rich-like protein gene, partial cds; seed globulin (Glo-2) gene, complete cds; HMW-glutenin (Glu-Dty) gene, Glu-Dty-T2 allele, complete cds; and HMW-glutenin (HMW) gene, HMW-Dtx2 allele, complete cds Length = 102842 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 66 tcccaaattaagtgactcaactttgtactaacttta 101 ||||||| |||||||||||||||||||||||||||| Sbjct: 66252 tcccaaaataagtgactcaactttgtactaacttta 66287
>emb|AJ400712.1|TAE400712 Triticum aestivum vp1A gene for VIVIPAROUS1, exons 1-6 Length = 4349 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 55 tactccatccatcccaaattaagtgactcaactttgta 92 |||||| ||| ||||||||||||||||||||||||||| Sbjct: 3428 tactccctccgtcccaaattaagtgactcaactttgta 3465 Score = 44.1 bits (22), Expect = 0.59 Identities = 31/34 (91%) Strand = Plus / Minus Query: 53 agtactccatccatcccaaattaagtgactcaac 86 |||||||| ||| ||||| ||||||||||||||| Sbjct: 3538 agtactccctccgtcccatattaagtgactcaac 3505
>gb|AF091802.1|AF091802 Aegilops tauschii starch synthase I gene, complete cds Length = 11387 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 78 tgactcaactttgtactaactttagtacaaagttagta 115 ||||||||||||||||||||| ||||||||| |||||| Sbjct: 2072 tgactcaactttgtactaactatagtacaaaattagta 2035 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Plus Query: 52 aagtactccatccatcccaaattaagtgactcaactttgtactaa 96 ||||||||| ||| | ||||| || ||||||||||||||||||| Sbjct: 1996 aagtactccctccgttccaaaatagatgactcaactttgtactaa 2040
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence Length = 285506 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 66 tcccaaattaagtgactcaactttgtactaacttta 101 ||||||| ||||||||||||||||||| |||||||| Sbjct: 187688 tcccaaaataagtgactcaactttgtagtaacttta 187723
>gb|DQ267106.1| Triticum urartu clone BAC 210J24 chromosome 4A, complete sequence Length = 111912 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 55 tactccatccatcccaaattaagtgactcaactttgtact 94 |||||| ||| |||||||||||||| |||||||||||||| Sbjct: 68190 tactccctccgtcccaaattaagtgtctcaactttgtact 68229
>gb|AY133251.1|AY133250S2 Hordeum vulgare subsp. vulgare starch synthase II gene, exon 9 and complete cds Length = 3856 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 54 gtactccatccatcccaaattaagtgactcaactttgtactaactttagtacaaa 108 ||||||| ||| ||||||| ||| || ||||||||||||||| || ||||||||| Sbjct: 1002 gtactccctccgtcccaaaataactgtctcaactttgtactagctctagtacaaa 948
>emb|AJ400714.1|TAE400714 Triticum aestivum vp1D gene for VIVIPAROUS1, exons 1-6 Length = 4230 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 53 agtactccatccatcccaaattaagtgactcaactttgtactaactttagtacaaagtt 111 |||||||| ||| ||||||| |||||| ||||| ||| ||||||| |||||||||||| Sbjct: 3665 agtactccttccgtcccaaaataagtgtctcaattttacactaactctagtacaaagtt 3723
>gb|AY821703.1| Henrardia persica beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1460 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 55 tactccatccatcccaaattaagtgactcaactttgtactaa 96 |||||| ||| ||||||| |||||||||||||||| |||||| Sbjct: 1193 tactccctccgtcccaaaataagtgactcaactttatactaa 1234 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 55 tactccatccatcccaaattaagtgactcaacttt 89 |||||| ||| ||||||| |||||||||||||||| Sbjct: 1267 tactccctccgtcccaaaataagtgactcaacttt 1233
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 66 tcccaaattaagtgactcaactttgtactaactttagtacaaagtt 111 ||||||| |||||| ||||||||||||||| | |||||||||||| Sbjct: 50408 tcccaaaataagtgtctcaactttgtactagttctagtacaaagtt 50453
>gb|U29095.1|U29095 Triticum aestivum serine-threonine protein kinase (TaPK3) gene, exons 3 through 9 and complete cds Length = 2250 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 55 tactccatccatcccaaattaagtgactcaactttgtactaa 96 |||||| ||| |||| || ||||||||||||||||||||||| Sbjct: 435 tactccctccgtcccgaaataagtgactcaactttgtactaa 394 Score = 40.1 bits (20), Expect = 9.3 Identities = 53/63 (84%), Gaps = 2/63 (3%) Strand = Plus / Plus Query: 55 tactccatccatcccaaattaagtga--ctcaactttgtactaactttagtacaaagtta 112 |||||| ||| ||||||| |||||| ||||||||| ||||| ||||||||||| ||| Sbjct: 337 tactccctccgtcccaaaataagtggatctcaactttatactatttttagtacaaaatta 396 Query: 113 gta 115 ||| Sbjct: 397 gta 399
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Plus Query: 47 aaaataagtactccatccatcccaaattaagtg 79 |||||||||||||| ||||||||||| |||||| Sbjct: 22524006 aaaataagtactccctccatcccaaaataagtg 22524038 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 47 aaaataagtactccatccatcccaaattaagtg 79 |||||||||||||| ||||||||||| |||||| Sbjct: 22495278 aaaataagtactccctccatcccaaaataagtg 22495246 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 53 agtactccatccatcccaaattaagt 78 |||||||||||||||||||| ||||| Sbjct: 26164473 agtactccatccatcccaaaataagt 26164448 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 agtactccatccatcccaaa 72 |||||||||||||||||||| Sbjct: 17329264 agtactccatccatcccaaa 17329283
>dbj|AP003724.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0498C03 Length = 146394 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 47 aaaataagtactccatccatcccaaattaagtg 79 |||||||||||||| ||||||||||| |||||| Sbjct: 132411 aaaataagtactccctccatcccaaaataagtg 132379
>emb|X83518.1|HVKNOX3 H.vulgare Knox3 gene Length = 10815 Score = 48.1 bits (24), Expect = 0.038 Identities = 39/44 (88%) Strand = Plus / Plus Query: 68 ccaaattaagtgactcaactttgtactaactttagtacaaagtt 111 ||||| |||||| ||||||||||||||| || || ||||||||| Sbjct: 7214 ccaaaataagtgtctcaactttgtactagctctactacaaagtt 7257
>gb|AF509746.1| Hordeum vulgare subsp. spontaneum OSU6 receptor-like kinase gene, complete cds Length = 2513 Score = 48.1 bits (24), Expect = 0.038 Identities = 45/52 (86%) Strand = Plus / Plus Query: 53 agtactccatccatcccaaattaagtgactcaactttgtactaactttagta 104 |||||||| ||| ||||||| ||| || ||||||||||||||| || ||||| Sbjct: 1308 agtactccctccgtcccaaaataattgtctcaactttgtactagctctagta 1359
>gb|AF509745.1| Hordeum vulgare subsp. vulgare Steptoe receptor-like kinase gene, complete cds Length = 2550 Score = 48.1 bits (24), Expect = 0.038 Identities = 45/52 (86%) Strand = Plus / Plus Query: 53 agtactccatccatcccaaattaagtgactcaactttgtactaactttagta 104 |||||||| ||| ||||||| ||| || ||||||||||||||| || ||||| Sbjct: 1333 agtactccctccgtcccaaaataattgtctcaactttgtactagctctagta 1384
>gb|AF509744.1| Hordeum vulgare subsp. vulgare Morex receptor-like kinase gene, complete cds Length = 4643 Score = 48.1 bits (24), Expect = 0.038 Identities = 45/52 (86%) Strand = Plus / Plus Query: 53 agtactccatccatcccaaattaagtgactcaactttgtactaactttagta 104 |||||||| ||| ||||||| ||| || ||||||||||||||| || ||||| Sbjct: 2034 agtactccctccgtcccaaaataattgtctcaactttgtactagctctagta 2085
>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness locus region Length = 129099 Score = 46.1 bits (23), Expect = 0.15 Identities = 38/43 (88%) Strand = Plus / Minus Query: 66 tcccaaattaagtgactcaactttgtactaactttagtacaaa 108 ||||||| |||||| ||| ||||||||||| || ||||||||| Sbjct: 31513 tcccaaaataagtgtctccactttgtactagctctagtacaaa 31471
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 51 taagtactccatccatcccaaattaagtgac 81 |||||||||| ||||||||||| |||||||| Sbjct: 13120437 taagtactccctccatcccaaaataagtgac 13120467 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 48 aaataagtactccatccatcccaaattaa 76 ||||||||||| | ||||||||||||||| Sbjct: 7045911 aaataagtactacctccatcccaaattaa 7045883 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 45 tcaaaataagtactccatccatcccaaa 72 |||||||||||||| | ||||||||||| Sbjct: 34646491 tcaaaataagtactacctccatcccaaa 34646518
>gb|AF446141.1| Aegilops tauschii LZ-NBS-LRR class RGA, NBS-LRR class RGA, HCBT-like putative defense response protein, and putative alliin lyase genes, complete cds; and unknown genes Length = 106618 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 81 ctcaactttgtactaactttagtacaaagtt 111 ||||||||||||| || |||||||||||||| Sbjct: 49102 ctcaactttgtacaaagtttagtacaaagtt 49072
>dbj|AP004789.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476C12 Length = 157570 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 51 taagtactccatccatcccaaattaagtgac 81 |||||||||| ||||||||||| |||||||| Sbjct: 97014 taagtactccctccatcccaaaataagtgac 97044
>gb|AF548379.1| Aegilops tauschii isoamylase gene, complete cds Length = 9643 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 78 tgactcaactttgtactaacttt 100 ||||||||||||||||||||||| Sbjct: 6896 tgactcaactttgtactaacttt 6874
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence Length = 153766 Score = 44.1 bits (22), Expect = 0.59 Identities = 49/58 (84%) Strand = Plus / Minus Query: 55 tactccatccatcccaaattaagtgactcaactttgtactaactttagtacaaagtta 112 |||||| ||||||||||| |||||| | || |||||| || |||||||| ||||||| Sbjct: 117199 tactccctccatcccaaaataagtgtgttaattttgtattagctttagtataaagtta 117142
>gb|AY491681.1| Triticum monococcum DV92 BAC 109N23, complete sequence Length = 101101 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 90 gtactaactttagtacaaagtt 111 |||||||||||||||||||||| Sbjct: 22325 gtactaactttagtacaaagtt 22304
>emb|CR626933.1| Triticum turgidum Length = 25216 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 90 gtactaactttagtacaaagtt 111 |||||||||||||||||||||| Sbjct: 1422 gtactaactttagtacaaagtt 1401
>emb|CR626929.1| Triticum aestivum Length = 20745 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 90 gtactaactttagtacaaagtt 111 |||||||||||||||||||||| Sbjct: 1423 gtactaactttagtacaaagtt 1402
>gb|AE014836.1| Plasmodium falciparum 3D7 chromosome 11 section 1 of 8 of the complete sequence Length = 250743 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 tacggtccaaaggcacccacaa 211 |||||||||||||||||||||| Sbjct: 26884 tacggtccaaaggcacccacaa 26905
>gb|AC149204.1| Medicago truncatula chromosome 7 BAC clone mth2-77n20, complete sequence Length = 75741 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 54 gtactccatccatcccaaatta 75 |||||||||||||||||||||| Sbjct: 46357 gtactccatccatcccaaatta 46378
>gb|AC169379.4| Sorghum bicolor clone SB_BBc0088B22, complete sequence Length = 105215 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 49 aataagtactccatccatcccaaatt 74 |||||||||||| ||||||||||||| Sbjct: 29918 aataagtactccctccatcccaaatt 29893
>dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0062J02 Length = 151636 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 53 agtactccatccatcccaaattaagt 78 |||||||||||||||||||| ||||| Sbjct: 143718 agtactccatccatcccaaaataagt 143693
>dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0453H04 Length = 175047 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 53 agtactccatccatcccaaattaagt 78 |||||||||||||||||||| ||||| Sbjct: 29013 agtactccatccatcccaaaataagt 28988
>emb|BX004813.5| Zebrafish DNA sequence from clone CH211-55K22 in linkage group 8, complete sequence Length = 148955 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 228 gggaacacacgcacacacaaaa 249 |||||||||||||||||||||| Sbjct: 31677 gggaacacacgcacacacaaaa 31698
>emb|BX005105.6| Zebrafish DNA sequence from clone DKEY-37M8 in linkage group 22, complete sequence Length = 171403 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 114 tagccattagcaatttagcatacagg 139 ||||||||||||||||||||| |||| Sbjct: 168419 tagccattagcaatttagcatccagg 168394
>gb|CP000223.1| Drosophila melanogaster genomic scaffold 211000022280790 Length = 626829 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 541 cagcatatatctatcagcatct 562 |||||||||||||||||||||| Sbjct: 553844 cagcatatatctatcagcatct 553823
>gb|AY758234.1| Hordeum vulgare subsp. vulgare cultivar Morex BM5b gene, partial cds Length = 4954 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 84 aactttgtactaactttagtacaaagtta 112 |||||||||||| || ||||||||||||| Sbjct: 3856 aactttgtactatctctagtacaaagtta 3828
>gb|AC163741.3| Pan troglodytes BAC clone CH251-406E22 from chromosome unknown, complete sequence Length = 169655 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 acacacgcacacacaaaaaga 252 ||||||||||||||||||||| Sbjct: 70076 acacacgcacacacaaaaaga 70096
>emb|AJ249141.1|HVU249141 Hordeum vulgare mRNA for MADS-box protein (m1 gene) Length = 1086 Score = 42.1 bits (21), Expect = 2.3 Identities = 48/57 (84%) Strand = Plus / Plus Query: 55 tactccatccatcccaaattaagtgactcaactttgtactaactttagtacaaagtt 111 |||||| ||| || |||| ||| || |||||||||||| || || |||||||||||| Sbjct: 914 tactccctccgtctcaaaataactgtctcaactttgtattagctctagtacaaagtt 970
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 55 tactccatccatcccaaattaagtg 79 |||||||||||||||||| |||||| Sbjct: 26128617 tactccatccatcccaaaataagtg 26128593 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 agtactccatccatcccaaa 72 |||||||||||||||||||| Sbjct: 34190437 agtactccatccatcccaaa 34190456 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 taagtactccatccatccca 70 |||||||||||||||||||| Sbjct: 32093659 taagtactccatccatccca 32093678
>emb|BX005297.22| Zebrafish DNA sequence from clone CH211-271B8 in linkage group 3, complete sequence Length = 156906 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 232 acacacgcacacacaaaaagattat 256 |||||| |||||||||||||||||| Sbjct: 146946 acacacacacacacaaaaagattat 146922
>emb|AL450398.9| Human DNA sequence from clone RP11-202P11 on chromosome 10 Contains the 3'end of a novel gene containing FLJ40604 and FLJ40930, complete sequence Length = 55063 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 acacacgcacacacaaaaaga 252 ||||||||||||||||||||| Sbjct: 15655 acacacgcacacacaaaaaga 15635
>emb|AL022156.2|HS30A23 Human DNA sequence from clone RP6-30A23 on chromosome Xq25 Contains the 5' end of the BIRC4 gene for baculoviral IAP repeat-containing 4, a novel gene and a CpG island, complete sequence Length = 12610 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 acacacgcacacacaaaaaga 252 ||||||||||||||||||||| Sbjct: 11579 acacacgcacacacaaaaaga 11559
>gb|AC133930.4| Oryza sativa chromosome 3 BAC OSJNBa0039O18 genomic sequence, complete sequence Length = 139187 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 55 tactccatccatcccaaattaagtg 79 |||||||||||||||||| |||||| Sbjct: 27933 tactccatccatcccaaaataagtg 27957
>gb|AC103808.2| Homo sapiens chromosome 18, clone RP11-94B19, complete sequence Length = 152722 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 497 catctttttcttcatataaacattt 521 |||||||||||||| |||||||||| Sbjct: 126754 catctttttcttcaaataaacattt 126778
>gb|AC044784.11| Homo sapiens chromosome 10 clone RP11-428L9, complete sequence Length = 179711 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 480 aaatattttcactgaaacatctttt 504 ||||||||||| ||||||||||||| Sbjct: 30293 aaatattttcagtgaaacatctttt 30269
>gb|AC140035.9| Medicago truncatula clone mth2-25n18, complete sequence Length = 120870 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 501 tttttcttcatataaacattt 521 ||||||||||||||||||||| Sbjct: 86879 tttttcttcatataaacattt 86899
>gb|AC140068.18| Medicago truncatula clone mth2-15l24, complete sequence Length = 111620 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 tactccatccatcccaaatta 75 ||||||||||||||||||||| Sbjct: 45238 tactccatccatcccaaatta 45218
>gb|AC060835.7| Homo sapiens BAC clone RP11-785F11 from 4, complete sequence Length = 160624 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 231 aacacacgcacacacaaaaagatta 255 |||||||||||||||| |||||||| Sbjct: 48323 aacacacgcacacacacaaagatta 48299
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete sequence Length = 4332241 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 620 cctcacgaattccaatcttct 640 ||||||||||||||||||||| Sbjct: 3761044 cctcacgaattccaatcttct 3761064
>gb|AC011095.5|AC011095 Homo sapiens, clone RP11-1O2, complete sequence Length = 157051 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 497 catctttttcttcatataaacattt 521 |||||||||||||| |||||||||| Sbjct: 4189 catctttttcttcaaataaacattt 4213
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 55 tactccatccatcccaaattaagtg 79 |||||||||||||||||| |||||| Sbjct: 26219926 tactccatccatcccaaaataagtg 26219902 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 agtactccatccatcccaaa 72 |||||||||||||||||||| Sbjct: 34280909 agtactccatccatcccaaa 34280928 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 taagtactccatccatccca 70 |||||||||||||||||||| Sbjct: 32184171 taagtactccatccatccca 32184190
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 tactccatccatcccaaatta 75 ||||||||||||||||||||| Sbjct: 8687824 tactccatccatcccaaatta 8687844 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 tactccatccatcccaaatta 75 ||||||||||||||||||||| Sbjct: 3997046 tactccatccatcccaaatta 3997026 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 aataagtactccatccatcc 68 |||||||||||||||||||| Sbjct: 659281 aataagtactccatccatcc 659300
>gb|AC093753.2| Homo sapiens BAC clone RP11-50C12 from 4, complete sequence Length = 106383 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 ttggcattaaagggttatttc 295 ||||||||||||||||||||| Sbjct: 58147 ttggcattaaagggttatttc 58167
>dbj|AB125341.2| Staphylococcus warneri plasmid pPI-1 DNA, complete sequence Length = 30201 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 aggcccaagctcaagaatcat 361 ||||||||||||||||||||| Sbjct: 23023 aggcccaagctcaagaatcat 23043
>dbj|AB121757.2| Staphylococcus warneri genes for putative response regulator, NukA, NukM, NukT, NukF, NukE, NukG, NukH, putative plasmid replication-associated protein, putative plasmid replication-associated protein, replication protein, partial and complete cds Length = 11740 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 aggcccaagctcaagaatcat 361 ||||||||||||||||||||| Sbjct: 5700 aggcccaagctcaagaatcat 5720
>dbj|AP002523.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0013F10 Length = 163095 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 tactccatccatcccaaatta 75 ||||||||||||||||||||| Sbjct: 118950 tactccatccatcccaaatta 118930
>dbj|AP002817.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0699D11 Length = 140825 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 tactccatccatcccaaatta 75 ||||||||||||||||||||| Sbjct: 5281 tactccatccatcccaaatta 5301
>dbj|AP002525.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0462H08 Length = 139152 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 tactccatccatcccaaatta 75 ||||||||||||||||||||| Sbjct: 120019 tactccatccatcccaaatta 120039
>gb|AC159218.3| Pan troglodytes BAC clone CH251-59O2 from chromosome unknown, complete sequence Length = 178970 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 acacacgcacacacaaaaaga 252 ||||||||||||||||||||| Sbjct: 5579 acacacgcacacacaaaaaga 5559
>dbj|AP005003.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0495C02 Length = 151467 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 48 aaataagtactccatccatcccaaattaa 76 ||||||||||| | ||||||||||||||| Sbjct: 49330 aaataagtactacctccatcccaaattaa 49302
>dbj|BS000135.1| Pan troglodytes chromosome 22 clone:RP43-114M01, map 22, complete sequences Length = 73133 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 gatgaaaatgatcccagcata 547 ||||||||||||||||||||| Sbjct: 27125 gatgaaaatgatcccagcata 27145
>emb|BX470234.8| Zebrafish DNA sequence from clone DKEY-94N12 in linkage group 22, complete sequence Length = 149941 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 acacacgcacacacaaaaaga 252 ||||||||||||||||||||| Sbjct: 141488 acacacgcacacacaaaaaga 141508
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, complete sequence Length = 4277185 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 620 cctcacgaattccaatcttct 640 ||||||||||||||||||||| Sbjct: 512949 cctcacgaattccaatcttct 512929
>gb|AE016830.1| Enterococcus faecalis V583, complete genome Length = 3218031 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 473 tagcatcaaatattttcactg 493 ||||||||||||||||||||| Sbjct: 1246466 tagcatcaaatattttcactg 1246446
>emb|AL772403.11| Mouse DNA sequence from clone RP23-458E2 on chromosome 4, complete sequence Length = 108612 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 555 cagcatctgctccaactcaat 575 ||||||||||||||||||||| Sbjct: 86692 cagcatctgctccaactcaat 86712
>gb|AC125525.3| Mus musculus BAC clone RP24-395H10 from 1, complete sequence Length = 195904 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 310 tgaaggccagcaacgggcaag 330 ||||||||||||||||||||| Sbjct: 128698 tgaaggccagcaacgggcaag 128718
>gb|AY886519.1| Homo sapiens baculoviral IAP repeat-containing 4 (BIRC4) gene, complete cds Length = 57320 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 acacacgcacacacaaaaaga 252 ||||||||||||||||||||| Sbjct: 12294 acacacgcacacacaaaaaga 12274
>gb|AY887088.1| Hordeum vulgare subsp. vulgare clone BAC 315I20 VRN-H1 (AP1b) pseudogene, partial sequence Length = 4018 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 84 aactttgtactaactttagtacaaagtta 112 |||||||||||| || ||||||||||||| Sbjct: 3904 aactttgtactatctctagtacaaagtta 3876
>gb|AC164095.4| Mus musculus BAC clone RP23-355A22 from chromosome 7, complete sequence Length = 184356 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 555 cagcatctgctccaactcaattgt 578 ||||||||||||||| |||||||| Sbjct: 59807 cagcatctgctccaattcaattgt 59830
>gb|AC103399.9| Mus musculus chromosome 3, clone RP23-310N18, complete sequence Length = 154918 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 caaatattttcactgaaaca 498 |||||||||||||||||||| Sbjct: 129250 caaatattttcactgaaaca 129269
>gb|AC119291.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0052K01, complete sequence Length = 144395 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 tactccatccatcccaaattaagt 78 |||| ||||||||||||||||||| Sbjct: 3250 tacttcatccatcccaaattaagt 3273
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 aacacacgcacacacaaaaa 250 |||||||||||||||||||| Sbjct: 697532 aacacacgcacacacaaaaa 697513
>gb|AC005354.1| Homo sapiens chromosome 5, P1 clone 1320c6 (LBNL H59), complete sequence Length = 28065 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 cacacgcacacacaaaaaga 252 |||||||||||||||||||| Sbjct: 367 cacacgcacacacaaaaaga 386
>gb|AC090441.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0052C09, complete sequence Length = 139468 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 agtactccatccatcccaaa 72 |||||||||||||||||||| Sbjct: 133474 agtactccatccatcccaaa 133455
>gb|AC134053.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0005H02, complete sequence Length = 144882 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 47 aaaataagtactccatccatcccaaattaagt 78 |||| ||||||||||||| ||||||| ||||| Sbjct: 136653 aaaaaaagtactccatccgtcccaaaataagt 136684
>gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0025P09, complete sequence Length = 167318 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 agtactccatccatcccaaa 72 |||||||||||||||||||| Sbjct: 141719 agtactccatccatcccaaa 141738
>gb|AC119678.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0005H23, complete sequence Length = 32949 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 47 aaaataagtactccatccatcccaaattaagt 78 |||| ||||||||||||| ||||||| ||||| Sbjct: 3120 aaaaaaagtactccatccgtcccaaaataagt 3151
>gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1741_B01, complete sequence Length = 147704 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 tactccatccatcccaaattaagt 78 |||| ||||||||||||||||||| Sbjct: 134466 tacttcatccatcccaaattaagt 134489
>gb|AC140783.4| Mus musculus BAC clone RP24-253K16 from chromosome 15, complete sequence Length = 165903 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 507 ttcatataaacattttcctt 526 |||||||||||||||||||| Sbjct: 92669 ttcatataaacattttcctt 92688
>gb|AC108874.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_E12, complete sequence Length = 121293 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 agtactccatccatcccaaa 72 |||||||||||||||||||| Sbjct: 12514 agtactccatccatcccaaa 12533
>gb|AC137905.8| Mus musculus chromosome 15, clone RP23-334B11, complete sequence Length = 210548 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 507 ttcatataaacattttcctt 526 |||||||||||||||||||| Sbjct: 55126 ttcatataaacattttcctt 55145
>gb|AC114011.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0078f20, complete sequence Length = 151042 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 51 taagtactccatccatcccaaatt 74 |||||||||||||||| ||||||| Sbjct: 35771 taagtactccatccattccaaatt 35748
>emb|BX936415.10| Zebrafish DNA sequence from clone CH211-242N18 in linkage group 6, complete sequence Length = 176089 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 aacacacgcacacacaaaaa 250 |||||||||||||||||||| Sbjct: 2136 aacacacgcacacacaaaaa 2155
>gb|AC095032.3| Homo sapiens chromosome 1 clone RP11-153F1, complete sequence Length = 157344 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 tttcactgaaacatcttttt 505 |||||||||||||||||||| Sbjct: 17906 tttcactgaaacatcttttt 17925
>gb|AC102566.9| Mus musculus chromosome 9, clone RP23-223D10, complete sequence Length = 253343 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 tgggaacacacgcacacaca 246 |||||||||||||||||||| Sbjct: 131861 tgggaacacacgcacacaca 131880
>ref|XM_800492.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508595.11) partial mRNA Length = 363 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 aacacacgcacacacaaaaa 250 |||||||||||||||||||| Sbjct: 59 aacacacgcacacacaaaaa 40
>gb|AC132413.3| Mus musculus BAC clone RP23-375I11 from chromosome 1, complete sequence Length = 191541 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 aacacacgcacacacaaaaa 250 |||||||||||||||||||| Sbjct: 13226 aacacacgcacacacaaaaa 13207
>gb|AC122359.5| Mus musculus BAC clone RP23-421B1 from chromosome 6, complete sequence Length = 194338 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 ctttttcttcatataaacat 519 |||||||||||||||||||| Sbjct: 161548 ctttttcttcatataaacat 161529
>emb|CR450824.9| Zebrafish DNA sequence from clone CH211-147F12 in linkage group 23, complete sequence Length = 170611 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 aacacacgcacacacaaaaa 250 |||||||||||||||||||| Sbjct: 148666 aacacacgcacacacaaaaa 148685
>emb|CR759824.9| Zebrafish DNA sequence from clone DKEY-81E3 in linkage group 13, complete sequence Length = 174086 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 acaatttaaagtttttgtct 227 |||||||||||||||||||| Sbjct: 42469 acaatttaaagtttttgtct 42488
>gb|AC122186.2| Mus musculus BAC clone RP23-19M20 from 1, complete sequence Length = 160653 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 aacacacgcacacacaaaaa 250 |||||||||||||||||||| Sbjct: 18017 aacacacgcacacacaaaaa 18036
>gb|AC123898.40| Medicago truncatula clone mth2-31m6, complete sequence Length = 152299 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tactccatccatcccaaatt 74 |||||||||||||||||||| Sbjct: 148768 tactccatccatcccaaatt 148749
>gb|AC138451.15| Medicago truncatula clone mth2-24k1, complete sequence Length = 123909 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 tactccatccatcccaaatt 74 |||||||||||||||||||| Sbjct: 17703 tactccatccatcccaaatt 17722
>emb|BX649201.1| Human DNA sequence from clone RP11-347K2 on chromosome 1 Contains two novel genes, complete sequence Length = 100266 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 tttcactgaaacatcttttt 505 |||||||||||||||||||| Sbjct: 28439 tttcactgaaacatcttttt 28458
>gb|AC183921.2| Pan troglodytes BAC clone CH251-617M1 from chromosome unknown, complete sequence Length = 188195 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 acacacgcacacacaaaaag 251 |||||||||||||||||||| Sbjct: 128815 acacacgcacacacaaaaag 128834
>emb|AL512782.6| Human DNA sequence from clone RP11-464I4 on chromosome 13, complete sequence Length = 186266 Score = 40.1 bits (20), Expect = 9.3 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 559 atctgctccaactcaattgttgtagaaa 586 |||||||||||||||||| ||||||||| Sbjct: 148615 atctgctccaactcaatt-ttgtagaaa 148641
>emb|AL159163.40| Human DNA sequence from clone RP11-514O12 on chromosome 6 Contains the 5' end of a variant of the RPS6KA2 gene for ribosomal protein S6 kinase, 90kD, polypeptide 2 (RSK3), a novel gene, the 3' end of the gene for ribonuclease 6 precursor (RNASE6PL)(FLJ10907) and 2 CpG islands, complete sequence Length = 156938 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 aacacacgcacacacaaaaa 250 |||||||||||||||||||| Sbjct: 85394 aacacacgcacacacaaaaa 85375
>emb|AL139260.19| Human DNA sequence from clone RP5-864K19 on chromosome 1p32.3-34.1 Contains the MYCBP gene for c-myc binding protein, the GJA10 gene for gap junction protein alpha 10, the RHBDL2 gene for rhomboid veinlet-like 2 (Drosophila), a novel gene and the RRAGC gene for Ras-related GTP binding C, complete sequence Length = 155138 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 cacacgcacacacaaaaaga 252 |||||||||||||||||||| Sbjct: 21770 cacacgcacacacaaaaaga 21789
>emb|AL031680.20|HS850H21 Human DNA sequence from clone RP5-850H21 on chromosome 20q13.11-13.2 Contains the 5' end of the BCAS4 gene for breast carcinoma amplified sequence 4, the PARD6B gene for par-6 partitioning defective 6 homolog beta (C. elegans) and two CpG islands, complete sequence Length = 117431 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 tctttttcttcatataaaca 518 |||||||||||||||||||| Sbjct: 16802 tctttttcttcatataaaca 16821
>emb|Z23164.1|CFFARPA2A C.fasciculata CfaRPA2 gene, complete CDS Length = 1376 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 aacacacgcacacacaaaaa 250 |||||||||||||||||||| Sbjct: 363 aacacacgcacacacaaaaa 382
>emb|AL929356.1|PFA929356 Plasmodium falciparum strain 3D7, chromosome 9; segment 2/5 Length = 335050 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 tttcttcatataaacattttcctt 526 ||||||||||||||| |||||||| Sbjct: 175912 tttcttcatataaactttttcctt 175889
>emb|AL663115.11| Mouse DNA sequence from clone RP23-452C23 on chromosome 11 Contains the gene for a novel protein simialr to cell division cycle associated 4 Cdca4, a ribosomal protein L15 (Rpl15) pseudogene, the 3' end of a novel gene and two CpG islands, complete sequence Length = 183089 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 acacacgcacacacaaaaag 251 |||||||||||||||||||| Sbjct: 46534 acacacgcacacacaaaaag 46515
>emb|AL731635.3|OSJN00277 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0016B03, complete sequence Length = 125780 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 aataagtactccatccatcccaaa 72 |||||||||||| ||||||||||| Sbjct: 115526 aataagtactccctccatcccaaa 115549
>emb|AL731627.3|OSJN00272 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0095E20, complete sequence Length = 138572 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 aataagtactccatccatcccaaa 72 |||||||||||| ||||||||||| Sbjct: 6102 aataagtactccctccatcccaaa 6125
>emb|AL604031.10| Mouse DNA sequence from clone RP23-24O5 on chromosome 11 Contains a ribosomal protein L13 (Rpl13) pseudogene, a novel gene and two CpG islands, complete sequence Length = 215675 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 491 ctgaaacatctttttcttca 510 |||||||||||||||||||| Sbjct: 73051 ctgaaacatctttttcttca 73032
>emb|AL606444.3|OSJN00019 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L09, complete sequence Length = 159502 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 attagcaatttagcatacag 138 |||||||||||||||||||| Sbjct: 78309 attagcaatttagcatacag 78328
>emb|AJ507395.1|HVU507395 Hordeum vulgare subsp. vulgare rpoT gene for DNA-directed RNA polymerase, chloroplast precursor, exons 1-19 Length = 10573 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 54 gtactccatccatcccaaattaagtgactcaa 85 ||||||| ||| ||||||| |||||||||||| Sbjct: 7896 gtactccctccgtcccaaaataagtgactcaa 7865
>emb|CR938710.1| Medicago truncatula chromosome 5 clone mth2-170k9, COMPLETE SEQUENCE Length = 123977 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tactccatccatcccaaatt 74 |||||||||||||||||||| Sbjct: 2328 tactccatccatcccaaatt 2309
>gb|AC087417.27| Mus musculus strain C57BL/6J chromosome 2 clone rp23-382b13, complete sequence Length = 225248 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 223 tgtctgggaacacacgcacacaca 246 ||||| |||||||||||||||||| Sbjct: 134150 tgtctaggaacacacgcacacaca 134127
>emb|CR854952.6| Zebrafish DNA sequence from clone CH211-106K4 in linkage group 16, complete sequence Length = 27425 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 aacacacgcacacacaaaaa 250 |||||||||||||||||||| Sbjct: 11638 aacacacgcacacacaaaaa 11619
>emb|CR848794.6| Zebrafish DNA sequence from clone DKEYP-11C8 in linkage group 5, complete sequence Length = 108725 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 226 ctgggaacacacgcacacacaaaa 249 |||||||||||| ||||||||||| Sbjct: 56124 ctgggaacacacacacacacaaaa 56101
>emb|CR361561.8| Zebrafish DNA sequence from clone CH211-218K8 in linkage group 25, complete sequence Length = 200274 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 232 acacacgcacacacaaaaagatta 255 |||||| ||||||||||||||||| Sbjct: 72035 acacacacacacacaaaaagatta 72012
>emb|CR352302.9| Zebrafish DNA sequence from clone DKEY-260C5 in linkage group 19, complete sequence Length = 146664 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 gggaacacacgcacacacaa 247 |||||||||||||||||||| Sbjct: 125256 gggaacacacgcacacacaa 125237
>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09, complete sequence Length = 145070 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 agtactccatccatcccaaa 72 |||||||||||||||||||| Sbjct: 87188 agtactccatccatcccaaa 87169
>emb|CR381598.5| Zebrafish DNA sequence from clone CH211-263K4 in linkage group 8, complete sequence Length = 146900 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 acacacgcacacacaaaaagatta 255 |||||| ||||||||||||||||| Sbjct: 103897 acacacacacacacaaaaagatta 103920
>gb|AC118660.5| Homo sapiens chromosome 15, clone RP11-631H11, complete sequence Length = 167851 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 agccattagcaatttagcat 134 |||||||||||||||||||| Sbjct: 11954 agccattagcaatttagcat 11935
>dbj|AP001625.1| Homo sapiens genomic DNA, chromosome 21, clone:KB907F12, MX1-D21S171 region, complete sequence Length = 130626 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 gatgaaaatgatcccagcat 546 |||||||||||||||||||| Sbjct: 96393 gatgaaaatgatcccagcat 96412
>gb|AC010008.5| Drosophila melanogaster 3L BAC RP98-13N15 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 158719 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 513 taaacattttccttgatgaaaatg 536 ||||||||||||| |||||||||| Sbjct: 21406 taaacattttcctcgatgaaaatg 21383
>gb|AC093436.2| Drosophila melanogaster 3L BAC RP98-1O14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163711 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 513 taaacattttccttgatgaaaatg 536 ||||||||||||| |||||||||| Sbjct: 54330 taaacattttcctcgatgaaaatg 54307
>gb|AC126794.15| Medicago truncatula clone mth2-24j7, complete sequence Length = 129513 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 tcaaaataagtactccatcc 64 |||||||||||||||||||| Sbjct: 53835 tcaaaataagtactccatcc 53816
>gb|AC024258.9| Homo sapiens chromosome 10 clone RP11-297N15, complete sequence Length = 160658 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 tttcttcatataaacatttt 522 |||||||||||||||||||| Sbjct: 44089 tttcttcatataaacatttt 44070
>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence, complete sequence Length = 178158 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 taagtactccatccatccca 70 |||||||||||||||||||| Sbjct: 94784 taagtactccatccatccca 94803
>gb|AC007109.7| Arabidopsis thaliana chromosome 2 clone T13C7 map mi148, complete sequence Length = 52784 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 ttagtagccattagcaattt 129 |||||||||||||||||||| Sbjct: 24550 ttagtagccattagcaattt 24531
>gb|AC109454.3| Homo sapiens chromosome 5 clone RP11-215P8, complete sequence Length = 142276 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 cacacgcacacacaaaaaga 252 |||||||||||||||||||| Sbjct: 40070 cacacgcacacacaaaaaga 40089
>gb|AC090281.8| Homo sapiens chromosome 8, clone RP5-1009N12, complete sequence Length = 114875 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 cacacgcacacacaaaaaga 252 |||||||||||||||||||| Sbjct: 68113 cacacgcacacacaaaaaga 68094
>gb|AC008066.4| Homo sapiens BAC clone RP11-293D9 from 8, complete sequence Length = 174347 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 cacacgcacacacaaaaaga 252 |||||||||||||||||||| Sbjct: 113985 cacacgcacacacaaaaaga 114004
>emb|BX664604.6| Zebrafish DNA sequence from clone CH211-253F20 in linkage group 7, complete sequence Length = 150508 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 gaacacacgcacacacaaaaagat 253 |||||||| ||||||||||||||| Sbjct: 63188 gaacacacacacacacaaaaagat 63165
>gb|AC091223.2| Drosophila melanogaster 3L BAC RP98-48G6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170988 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 513 taaacattttccttgatgaaaatg 536 ||||||||||||| |||||||||| Sbjct: 167880 taaacattttcctcgatgaaaatg 167857
>gb|AC148971.3| Medicago truncatula chromosome 2 BAC clone mth2-79e23, complete sequence Length = 108394 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 tactccatccatcccaaatt 74 |||||||||||||||||||| Sbjct: 76722 tactccatccatcccaaatt 76741
>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome Length = 2174500 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 502 ttttcttcatataaacattt 521 |||||||||||||||||||| Sbjct: 1025529 ttttcttcatataaacattt 1025510
>gb|AC079634.3|AC079634 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0045C13, from Chromosome 10, complete sequence Length = 161250 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 agtactccatccatcccaaa 72 |||||||||||||||||||| Sbjct: 13428 agtactccatccatcccaaa 13409
>gb|DP000030.1| Sus scrofa target 116 genomic scaffold Length = 380805 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 acacacgcacacacaaaaag 251 |||||||||||||||||||| Sbjct: 299509 acacacgcacacacaaaaag 299490
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 attagcaatttagcatacag 138 |||||||||||||||||||| Sbjct: 32308726 attagcaatttagcatacag 32308745 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 aataagtactccatccatcccaaa 72 |||||||||||| ||||||||||| Sbjct: 2390207 aataagtactccctccatcccaaa 2390230
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 aaatattttcactgaaacat 499 |||||||||||||||||||| Sbjct: 24362173 aaatattttcactgaaacat 24362154 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 aataagtactccatccatcccaaa 72 |||||||||||||||| ||||||| Sbjct: 22750991 aataagtactccatccgtcccaaa 22751014 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 aataagtactccatccatcccaaa 72 |||||||||||||||| ||||||| Sbjct: 1943225 aataagtactccatccgtcccaaa 1943248
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 47 aaaataagtactccatccatcccaaattaagt 78 |||| ||||||||||||| ||||||| ||||| Sbjct: 19559837 aaaaaaagtactccatccgtcccaaaataagt 19559868 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 51 taagtactccatccatcccaaatt 74 |||||||||||||||| ||||||| Sbjct: 16295336 taagtactccatccattccaaatt 16295313
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 agtactccatccatcccaaa 72 |||||||||||||||||||| Sbjct: 9780949 agtactccatccatcccaaa 9780930
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 51 taagtactccatccatcccaaattaagt 78 |||||||||| ||||||||||| ||||| Sbjct: 1803396 taagtactccctccatcccaaaataagt 1803423
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 agtactccatccatcccaaa 72 |||||||||||||||||||| Sbjct: 23839354 agtactccatccatcccaaa 23839373
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 tactccatccatcccaaattaagt 78 |||| ||||||||||||||||||| Sbjct: 26489775 tacttcatccatcccaaattaagt 26489798 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 agtactccatccatcccaaa 72 |||||||||||||||||||| Sbjct: 17881765 agtactccatccatcccaaa 17881784 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 agtactccatccatcccaaa 72 |||||||||||||||||||| Sbjct: 4719183 agtactccatccatcccaaa 4719164
>gb|AC025281.8| Homo sapiens chromosome 16 clone RP11-356O24, complete sequence Length = 193261 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 atagcatcaaatattttcac 491 |||||||||||||||||||| Sbjct: 27055 atagcatcaaatattttcac 27074
>gb|AC010317.5| Homo sapiens chromosome 5 clone CTB-88J14, complete sequence Length = 149115 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 acacacgcacacacaaaaag 251 |||||||||||||||||||| Sbjct: 37472 acacacgcacacacaaaaag 37491
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 agtactccatccatcccaaa 72 |||||||||||||||||||| Sbjct: 154249 agtactccatccatcccaaa 154268
>gb|AC016717.8| Homo sapiens BAC clone RP11-314B1 from 2, complete sequence Length = 210558 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 aacacacgcacacacaaaaa 250 |||||||||||||||||||| Sbjct: 114012 aacacacgcacacacaaaaa 114031
>gb|AC027298.20|AC027298 Mus musculus 7 BAC RP23-266F22 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 201467 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 acgcacacacaaaaagatta 255 |||||||||||||||||||| Sbjct: 108291 acgcacacacaaaaagatta 108310
>gb|AC022078.12|AC022078 Homo sapiens 12p BAC RP11-498P8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 169416 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 acacacgcacacacaaaaagatta 255 ||||||||||||||| |||||||| Sbjct: 69618 acacacgcacacacacaaagatta 69641
>dbj|AP004081.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1116_E04 Length = 94096 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 45 tcaaaataagtactccatccatcccaaa 72 |||||||||||||| | ||||||||||| Sbjct: 3442 tcaaaataagtactacctccatcccaaa 3469
>dbj|AP003219.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0032H19 Length = 126434 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 aataagtactccatccatcc 68 |||||||||||||||||||| Sbjct: 43025 aataagtactccatccatcc 43044
>dbj|AP003620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0596H06 Length = 142832 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 agtactccatccatcccaaa 72 |||||||||||||||||||| Sbjct: 65857 agtactccatccatcccaaa 65876
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 aataagtactccatccatcc 68 |||||||||||||||||||| Sbjct: 133886 aataagtactccatccatcc 133905
>dbj|AP003985.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1047_C01 Length = 97427 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 agtactccatccatcccaaa 72 |||||||||||||||||||| Sbjct: 27854 agtactccatccatcccaaa 27873
>emb|BX649513.4| Mouse DNA sequence from clone RP23-139J7 on chromosome 2, complete sequence Length = 27122 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 tgtctgggaacacacgcacacaca 246 ||||| |||||||||||||||||| Sbjct: 11820 tgtctaggaacacacgcacacaca 11843
>emb|BX649420.2| Zebrafish DNA sequence from clone CH211-139N7 in linkage group 20, complete sequence Length = 166858 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 gaacacacgcacacacaaaaagat 253 |||||||| ||||||||||||||| Sbjct: 145838 gaacacacacacacacaaaaagat 145861
>emb|BX649243.2| Zebrafish DNA sequence from clone CH211-127E19 in linkage group 20, complete sequence Length = 166766 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 gaacacacgcacacacaaaaagat 253 |||||||| ||||||||||||||| Sbjct: 21021 gaacacacacacacacaaaaagat 20998
>dbj|AP005563.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1227_D07 Length = 118358 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 51 taagtactccatccatcccaaattaagt 78 |||||||||| ||||||||||| ||||| Sbjct: 42058 taagtactccctccatcccaaaataagt 42085
>dbj|BS000068.1| Pan troglodytes chromosome 22 clone:RP43-046F21, map 22, complete sequences Length = 163689 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 attttcactgaaacatcttt 503 |||||||||||||||||||| Sbjct: 135602 attttcactgaaacatcttt 135583
>emb|BX004983.8| Zebrafish DNA sequence from clone DKEY-7F3, complete sequence Length = 234489 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 aacacacgcacacacaaaaa 250 |||||||||||||||||||| Sbjct: 39062 aacacacgcacacacaaaaa 39081
>dbj|AP003996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G06 Length = 122580 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 45 tcaaaataagtactccatccatcccaaa 72 |||||||||||||| | ||||||||||| Sbjct: 113106 tcaaaataagtactacctccatcccaaa 113133
>emb|AL845357.6| Zebrafish DNA sequence from clone DKEY-202M22 in linkage group 20, complete sequence Length = 221012 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 acacacgcacacacaaaaag 251 |||||||||||||||||||| Sbjct: 81161 acacacgcacacacaaaaag 81142
>dbj|AK073678.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050J03, full insert sequence Length = 1498 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 aaatattttcactgaaacat 499 |||||||||||||||||||| Sbjct: 1331 aaatattttcactgaaacat 1350
>gb|AC102279.18| Mus musculus chromosome 7, clone RP24-302P2, complete sequence Length = 170100 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 555 cagcatctgctccaactcaattgt 578 ||||||||||||||| |||||||| Sbjct: 117402 cagcatctgctccaattcaattgt 117425
>emb|AL772186.11| Mouse DNA sequence from clone RP23-281K3 on chromosome 4, complete sequence Length = 205714 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 ccaaattaagtgactcaact 87 |||||||||||||||||||| Sbjct: 49281 ccaaattaagtgactcaact 49300
>gb|AF466204.1| Sorghum bicolor clone SBTXS_0045I19, partial sequence Length = 77973 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 aagtactccatccatcccaaatta 75 |||||||| ||||||||||||||| Sbjct: 64860 aagtactcaatccatcccaaatta 64883
>emb|BX248090.11| Zebrafish DNA sequence from clone DKEY-156K12 in linkage group 20, complete sequence Length = 212314 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 aacacacgcacacacaaaaa 250 |||||||||||||||||||| Sbjct: 72397 aacacacgcacacacaaaaa 72416
>emb|AL844883.15| Zebrafish DNA sequence from clone DKEY-3J22 in linkage group 18, complete sequence Length = 189984 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 232 acacacgcacacacaaaaagatta 255 ||||||||||||||||||| |||| Sbjct: 182309 acacacgcacacacaaaaatatta 182286
>emb|BX323837.7| Zebrafish DNA sequence from clone DKEY-5N7 in linkage group 18, complete sequence Length = 228251 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 acacacgcacacacaaaaag 251 |||||||||||||||||||| Sbjct: 132684 acacacgcacacacaaaaag 132665
>emb|BX511038.6| Zebrafish DNA sequence from clone CH211-168I8 in linkage group 4, complete sequence Length = 58637 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 232 acacacgcacacacaaaaagatta 255 |||||| ||||||||||||||||| Sbjct: 43179 acacacacacacacaaaaagatta 43156
>emb|BX000468.5| Zebrafish DNA sequence from clone DKEY-1J5 in linkage group 20, complete sequence Length = 208583 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 ttaaagtttttgtctgggaa 232 |||||||||||||||||||| Sbjct: 50003 ttaaagtttttgtctgggaa 50022
>emb|AL732338.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0315F07, complete sequence Length = 73187 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 attagcaatttagcatacag 138 |||||||||||||||||||| Sbjct: 23663 attagcaatttagcatacag 23682
>emb|AL732333.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0613A10, complete sequence Length = 77572 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 attagcaatttagcatacag 138 |||||||||||||||||||| Sbjct: 74555 attagcaatttagcatacag 74574
>gb|AC007011.1|AC007011 Homo sapiens chromosome 16 clone 165E7, complete sequence Length = 161264 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 acacacgcacacacaaaaagatta 255 ||||||| |||||||||||||||| Sbjct: 97179 acacacgtacacacaaaaagatta 97202
>gb|AE003540.3| Drosophila melanogaster chromosome 3L, section 45 of 83 of the complete sequence Length = 297381 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 513 taaacattttccttgatgaaaatg 536 ||||||||||||| |||||||||| Sbjct: 22556 taaacattttcctcgatgaaaatg 22533
>dbj|AP001747.1| Homo sapiens genomic DNA, chromosome 21q, section 91/105 Length = 340000 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 gatgaaaatgatcccagcat 546 |||||||||||||||||||| Sbjct: 72546 gatgaaaatgatcccagcat 72565
>dbj|AP001681.1| Homo sapiens genomic DNA, chromosome 21q, section 25/105 Length = 340000 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 attttcactgaaacatcttt 503 |||||||||||||||||||| Sbjct: 108926 attttcactgaaacatcttt 108907
>dbj|AP001252.2| Homo sapiens genomic DNA, chromosome 21q, clone:RP11-636L7, complete sequence Length = 91242 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 attttcactgaaacatcttt 503 |||||||||||||||||||| Sbjct: 64014 attttcactgaaacatcttt 63995
>emb|BX284680.6| Mouse DNA sequence from clone RP23-260E20 on chromosome X, complete sequence Length = 168173 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 555 cagcatctgctccaactcaattgt 578 ||||||||||||||| |||||||| Sbjct: 97444 cagcatctgctccaattcaattgt 97467
>emb|AL935264.12| Mouse DNA sequence from clone RP23-118A9 on chromosome 4, complete sequence Length = 230886 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 tgggaacacacgcacacaca 246 |||||||||||||||||||| Sbjct: 31153 tgggaacacacgcacacaca 31134
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 agtactccatccatcccaaa 72 |||||||||||||||||||| Sbjct: 9786988 agtactccatccatcccaaa 9786969
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 47 aaaataagtactccatccatcccaaattaagt 78 |||| ||||||||||||| ||||||| ||||| Sbjct: 19721553 aaaaaaagtactccatccgtcccaaaataagt 19721584 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 51 taagtactccatccatcccaaatt 74 |||||||||||||||| ||||||| Sbjct: 16385315 taagtactccatccattccaaatt 16385292 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 agtactccatccatcccaaa 72 |||||||||||||||||||| Sbjct: 5067515 agtactccatccatcccaaa 5067534
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 aaatattttcactgaaacat 499 |||||||||||||||||||| Sbjct: 24290379 aaatattttcactgaaacat 24290360 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 aataagtactccatccatcccaaa 72 |||||||||||||||| ||||||| Sbjct: 22679182 aataagtactccatccgtcccaaa 22679205 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 aataagtactccatccatcccaaa 72 |||||||||||||||| ||||||| Sbjct: 1943176 aataagtactccatccgtcccaaa 1943199
>emb|AL772423.4|CNS08CA1 Oryza sativa chromosome 12, . BAC OJ1058_H10 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 103803 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 aaatattttcactgaaacat 499 |||||||||||||||||||| Sbjct: 25705 aaatattttcactgaaacat 25686
>emb|AL928745.3|CNS08CBI Oryza sativa chromosome 12, . BAC OSJNBb0092G12 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131603 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 aataagtactccatccatcccaaa 72 |||||||||||||||| ||||||| Sbjct: 62841 aataagtactccatccgtcccaaa 62864
>emb|AL928752.2|CNS08CBP Oryza sativa chromosome 12, . BAC OSJNBb0034E23 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 107247 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 aataagtactccatccatcccaaa 72 |||||||||||||||| ||||||| Sbjct: 24996 aataagtactccatccgtcccaaa 24973
>emb|AL928573.14| Zebrafish DNA sequence from clone DKEY-11F5, complete sequence Length = 244471 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 232 acacacgcacacacaaaaagatta 255 |||||| ||||||||||||||||| Sbjct: 63910 acacacacacacacaaaaagatta 63887
>emb|CT025664.5| Mouse DNA sequence from clone RP24-174I18 on chromosome 9, complete sequence Length = 163813 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 tgggaacacacgcacacaca 246 |||||||||||||||||||| Sbjct: 27843 tgggaacacacgcacacaca 27862
>emb|AL845367.6| Zebrafish DNA sequence from clone DKEYP-33D4 in linkage group 20, complete sequence Length = 104646 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 acacacgcacacacaaaaag 251 |||||||||||||||||||| Sbjct: 28276 acacacgcacacacaaaaag 28295
>dbj|AP001626.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1559F8, MX1-D21S171 region, complete sequence Length = 145762 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 gatgaaaatgatcccagcat 546 |||||||||||||||||||| Sbjct: 5632 gatgaaaatgatcccagcat 5651 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8,022,774 Number of Sequences: 3902068 Number of extensions: 8022774 Number of successful extensions: 241996 Number of sequences better than 10.0: 190 Number of HSP's better than 10.0 without gapping: 202 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 239251 Number of HSP's gapped (non-prelim): 2746 length of query: 678 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 655 effective length of database: 17,143,297,704 effective search space: 11228859996120 effective search space used: 11228859996120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
