>UTRO_HUMAN (P46939) Utrophin (Dystrophin-related protein 1) (DRP1) (DRP)|
          Length = 3433

 Score = 38.1 bits (87), Expect = 0.026
 Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
 Frame = -2

Query: 522  VSYTEFLEMFNDPDWGFGILTTLVKLEDSDHVRHGSHTCSICRY-PIIGSRFKETKH-SF 349
            +S  EF++  +        L  L ++  ++  +H +  C+IC+  PI+G R++  KH ++
Sbjct: 3033 ISVKEFIDWMHLEPQSMVWLPVLHRVAAAETAKHQAK-CNICKECPIVGFRYRSLKHFNY 3091

Query: 348  SLCNRCYSEGKVPSAFKLEEYRFKEY 271
             +C  C+  G+     KL  Y   EY
Sbjct: 3092 DVCQSCFFSGRTAKGHKL-HYPMVEY 3116

>DMD_HUMAN (P11532) Dystrophin|
          Length = 3685

 Score = 37.4 bits (85), Expect = 0.044
 Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
 Frame = -2

Query: 465  LTTLVKLEDSDHVRHGSHTCSICRY-PIIGSRFKETKH-SFSLCNRCYSEGKVPSAFKLE 292
            L  L ++  ++  +H +  C+IC+  PIIG R++  KH ++ +C  C+  G+V    K+ 
Sbjct: 3295 LPVLHRVAAAETAKHQAK-CNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKM- 3352

Query: 291  EYRFKEY 271
             Y   EY
Sbjct: 3353 HYPMVEY 3359

>DMD_CANFA (O97592) Dystrophin|
          Length = 3680

 Score = 37.4 bits (85), Expect = 0.044
 Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
 Frame = -2

Query: 465  LTTLVKLEDSDHVRHGSHTCSICRY-PIIGSRFKETKH-SFSLCNRCYSEGKVPSAFKLE 292
            L  L ++  ++  +H +  C+IC+  PIIG R++  KH ++ +C  C+  G+V    K+ 
Sbjct: 3290 LPVLHRVAAAETAKHQAK-CNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKM- 3347

Query: 291  EYRFKEY 271
             Y   EY
Sbjct: 3348 HYPMVEY 3354

>DMD_CHICK (P11533) Dystrophin|
          Length = 3660

 Score = 37.4 bits (85), Expect = 0.044
 Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
 Frame = -2

Query: 465  LTTLVKLEDSDHVRHGSHTCSICRY-PIIGSRFKETKH-SFSLCNRCYSEGKVPSAFKLE 292
            L  L ++  ++  +H +  C+IC+  PIIG R++  KH ++ +C  C+  G+V    K+ 
Sbjct: 3292 LPVLHRVAAAETAKHQAK-CNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKM- 3349

Query: 291  EYRFKEY 271
             Y   EY
Sbjct: 3350 HYPMVEY 3356

>DMD_MOUSE (P11531) Dystrophin|
          Length = 3678

 Score = 37.4 bits (85), Expect = 0.044
 Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
 Frame = -2

Query: 465  LTTLVKLEDSDHVRHGSHTCSICRY-PIIGSRFKETKH-SFSLCNRCYSEGKVPSAFKLE 292
            L  L ++  ++  +H +  C+IC+  PIIG R++  KH ++ +C  C+  G+V    K+ 
Sbjct: 3288 LPVLHRVAAAETAKHQAK-CNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKM- 3345

Query: 291  EYRFKEY 271
             Y   EY
Sbjct: 3346 HYPMVEY 3352

>DMD_PIG (Q5GN48) Dystrophin|
          Length = 3674

 Score = 37.4 bits (85), Expect = 0.044
 Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
 Frame = -2

Query: 465  LTTLVKLEDSDHVRHGSHTCSICRY-PIIGSRFKETKH-SFSLCNRCYSEGKVPSAFKLE 292
            L  L ++  ++  +H +  C+IC+  PIIG R++  KH ++ +C  C+  G+V    K+ 
Sbjct: 3284 LPVLHRVAAAETAKHQAK-CNICKECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKM- 3341

Query: 291  EYRFKEY 271
             Y   EY
Sbjct: 3342 HYPMVEY 3348

>DRP2_HUMAN (Q13474) Dystrophin-related protein 2|
          Length = 954

 Score = 37.0 bits (84), Expect = 0.058
 Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
 Frame = -2

Query: 525 MVSYTEFLEMFNDPDWGFGILTTLVKLEDSDHVRHGSHTCSICRY-PIIGSRFKETKH-S 352
           ++  ++FLE  N        L  L ++  ++ V+H +  CSICR  PI G R++  K  +
Sbjct: 569 VIEASQFLEWVNLEPQSMVWLPVLHRVTIAEQVKHQTK-CSICRQCPIKGFRYRSLKQFN 627

Query: 351 FSLCNRCYSEGKVPSAFKLEEYRFKEY 271
             +C  C+  G+     KL  Y   EY
Sbjct: 628 VDICQTCFLTGRASKGNKL-HYPIMEY 653

>DMDA_DROME (Q9VDW6) Dystrophin, isoforms A/C/DLP1/DLP3|
          Length = 3497

 Score = 33.9 bits (76), Expect = 0.49
 Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
 Frame = -2

Query: 465  LTTLVKLEDSDHVRHGSHTCSICR-YPIIGSRFKETK-HSFSLCNRCYSEGKVPSAFKL 295
            L  L +L  ++  +H +  C+IC+ YPI+G R++  K  +F +C +C+  G+     KL
Sbjct: 3094 LPVLHRLAAAEAAKHQAK-CNICKEYPIVGFRYRCLKCFNFDMCQKCFFFGRNAKNHKL 3151

>DMDB_DROME (Q9VDW3) Dystrophin, isoform B|
          Length = 1669

 Score = 33.9 bits (76), Expect = 0.49
 Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
 Frame = -2

Query: 465  LTTLVKLEDSDHVRHGSHTCSICR-YPIIGSRFKETK-HSFSLCNRCYSEGKVPSAFKL 295
            L  L +L  ++  +H +  C+IC+ YPI+G R++  K  +F +C +C+  G+     KL
Sbjct: 1266 LPVLHRLAAAEAAKHQAK-CNICKEYPIVGFRYRCLKCFNFDMCQKCFFFGRNAKNHKL 1323

>RL5_THEVO (Q97BW3) 50S ribosomal protein L5P|
          Length = 170

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
 Frame = -2

Query: 693 KRVVFDALLWRPASEGGRGQIRRSDALSYIKLLRAVYIPTHGASDM-LEMHGESDPTMVS 517
           K+ V D  + +    G +  +R+ DA++++   +A+Y+  +   D   + HG +   +  
Sbjct: 46  KKSVRDFNIRKRLPIGVKVTLRKDDAVNFLN--KALYVKDYKIPDYSFDKHGNAYFGISD 103

Query: 516 YTEFLEMFNDPDWG-FGILTTLV 451
           YT+F  M  DPD G FG+   +V
Sbjct: 104 YTDFKGMKYDPDIGIFGMDVAIV 126

>RL5_THEAC (Q56231) 50S ribosomal protein L5P|
          Length = 170

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
 Frame = -2

Query: 648 GGRGQIRRSDALSYIKLLRAVYIPTHGASDM-LEMHGESDPTMVSYTEFLEMFNDPDWG- 475
           G +  +R+ DA+ +++  +A Y+  +  +D   + HG +   +  YT+F  M  DPD G 
Sbjct: 61  GVKVTLRKKDAMEFLQ--KAFYVKDYKITDYSFDKHGNAYFGISDYTDFKGMKYDPDIGI 118

Query: 474 FGILTTLV 451
           FG+   +V
Sbjct: 119 FGMDVAIV 126

>CCDC3_MOUSE (Q9D6Y1) Coiled-coil domain-containing protein 3 precursor|
          Length = 273

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 19/64 (29%), Positives = 33/64 (51%)
 Frame = -2

Query: 666 WRPASEGGRGQIRRSDALSYIKLLRAVYIPTHGASDMLEMHGESDPTMVSYTEFLEMFND 487
           WRP SEG R ++  ++ + Y K+L A++    G  + L    ++    + Y+  +EM  D
Sbjct: 28  WRPLSEGCRAEL--AETIVYAKVL-ALHPEVPGLYNYLPWQYQAGEGGLFYSAEVEMLCD 84

Query: 486 PDWG 475
             WG
Sbjct: 85  QAWG 88

>PUR6_YEAST (P21264) Phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21)|
           (AIR carboxylase) (AIRC)
          Length = 571

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 19/64 (29%), Positives = 30/64 (46%)
 Frame = -2

Query: 393 YPIIGSRFKETKHSFSLCNRCYSEGKVPSAFKLEEYRFKEYGNESEALIDKCMCFNLNSK 214
           YPI+     ET H  ++C+ CY+  +VP + +L+     E   +S      C  F +   
Sbjct: 207 YPIV-----ETIHKDNICDLCYAPARVPDSVQLKAKLLAENAIKS---FPGCGIFGVEMF 258

Query: 213 KLET 202
            LET
Sbjct: 259 YLET 262


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,114,027
Number of Sequences: 219361
Number of extensions: 2208770
Number of successful extensions: 5257
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5257
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6969622431
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)