>TRI46_MOUSE (Q7TNM2) Tripartite motif protein 46 (Tripartite, fibronectin|
           type-III and C-terminal SPRY motif protein)
          Length = 759

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = +2

Query: 59  LGQSGPAGHTTNPSATPASLPSTHAAKDPRPTNRPL*RP 175
           LGQ G  GH  +PS+ P S  ST + + PR + R L +P
Sbjct: 61  LGQQGYIGHGGDPSSEPTSPASTPSTRSPRLSRRTLPKP 99

>TRI46_HUMAN (Q7Z4K8) Tripartite motif protein 46 (Tripartite, fibronectin|
           type-III and C-terminal SPRY motif protein)
          Length = 759

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = +2

Query: 59  LGQSGPAGHTTNPSATPASLPSTHAAKDPRPTNRPL*RP 175
           LGQ G  GH  +PS+ P S  ST + + PR + R L +P
Sbjct: 61  LGQQGYIGHGGDPSSEPTSPASTPSTRSPRLSRRTLPKP 99

>SYJ1_SCHPO (O43001) Synaptojanin homolog 1 (EC 3.1.3.36)|
            (Inositol-1,4,5-trisphosphate 5-phosphatase 1)
          Length = 1076

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +1

Query: 55   PTRPKWPSRPHHKP*CHPRVAPINPRRQGSSSHQPTA--LTPL 177
            P +P  P++P H     PRV P+ P R GSSS    A  LTP+
Sbjct: 1000 PIKPNKPTKPDHL--VAPRVKPLLPPRSGSSSSGVPAPNLTPV 1040

>VC04_SWPVK (P32228) Protein C4|
          Length = 530

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = +3

Query: 249 IANKHLFCSGGMPPNRHLFFAPLSDVYILENQ*KEDCWSIHFHSISFYSNTLSC 410
           + N  ++C GG     H+     +DVYI  +  ++DCW    ++    S  LSC
Sbjct: 431 VYNDFIYCIGGRIDTPHISIEHTNDVYIYSS--RDDCWKYLSNTNVKRSFCLSC 482

>STK39_MOUSE (Q9Z1W9) STE20/SPS1-related proline-alanine-rich protein kinase (EC|
           2.7.11.1) (Ste-20-related kinase)
           (Serine/threonine-protein kinase 39)
          Length = 556

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 15/49 (30%), Positives = 22/49 (44%)
 Frame = +2

Query: 44  SPVGRLGQSGPAGHTTNPSATPASLPSTHAAKDPRPTNRPL*RPCYKLI 190
           +PV     + PA  T+ P+  PA  P+  AA  P P   P   P  + +
Sbjct: 18  APVTAAAATAPAAATSAPAPAPAPAPAASAAPAPAPAAAPAPAPAAQAV 66

>GAF1_SCHPO (Q10280) Transcription factor gaf1 (Gaf-1)|
          Length = 855

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 9/81 (11%)
 Frame = +2

Query: 86  TTNPSATP-ASLPSTHAAKDPRPT----NRPL*RPCYKLISRLIQGICPTR----TVVSP 238
           TTN +ATP A+LP+T   K  R      N+   +P     +   +G   TR    T  +P
Sbjct: 574 TTNTAATPQAALPTTLDTKKDRSVSFNINKNAEKPTVSNAAEDKKGDANTRRANATNPTP 633

Query: 239 LCVYCQQAPVLFWRDASEQTP 301
            C  CQ      WR + +  P
Sbjct: 634 TCTNCQTRTTPLWRRSPDGQP 654

>UBQL2_MOUSE (Q9QZM0) Ubiquilin-2 (Protein linking IAP with cytoskeleton 2)|
           (PLIC-2) (Ubiquitin-like product Chap1/Dsk2) (DSK2
           homolog) (Chap1)
          Length = 638

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +2

Query: 44  SPVGRLGQSGPAGHTTNPSATPASLPSTHAAKDPRPT 154
           +P+G +G  GP G  ++P +T   +P         PT
Sbjct: 522 TPIGPIGPIGPTGPASSPGSTGTGIPPATTVSSSAPT 558

>GATA5_MOUSE (P97489) Transcription factor GATA-5 (GATA-binding factor 5)|
          Length = 404

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 18/49 (36%), Positives = 20/49 (40%)
 Frame = +2

Query: 155 NRPL*RPCYKLISRLIQGICPTRTVVSPLCVYCQQAPVLFWRDASEQTP 301
           NRPL RP  +L S    G+C         C  C  A    WR  SE  P
Sbjct: 230 NRPLVRPQKRLSSSRRSGLC---------CSNCHTATTTLWRRNSEGEP 269

>HDAC9_HUMAN (Q9UKV0) Histone deacetylase 9 (HD9) (HD7B) (HD7)|
          Length = 1011

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 26/87 (29%), Positives = 37/87 (42%)
 Frame = +2

Query: 59  LGQSGPAGHTTNPSATPASLPSTHAAKDPRPTNRPL*RPCYKLISRLIQGICPTRTVVSP 238
           L QS P    T+PS    +LP    AKD  P  +    P  K+ SRL Q +   R+    
Sbjct: 185 LDQSSPPLSGTSPSYK-YTLPGAQDAKDDFPLRKTASEPNLKVRSRLKQKVAERRS---- 239

Query: 239 LCVYCQQAPVLFWRDASEQTPFLRTSF 319
                  +P+L  +D +  T F +  F
Sbjct: 240 -------SPLLRRKDGNVVTSFKKRMF 259

>UBQL2_HUMAN (Q9UHD9) Ubiquilin-2 (Protein linking IAP with cytoskeleton 2)|
           (PLIC-2) (hPLIC-2) (Ubiquitin-like product Chap1/Dsk2)
           (DSK2 homolog) (Chap1)
          Length = 624

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
 Frame = +2

Query: 44  SPVGRLGQSGPAGHTTNPSATPASLPS--THAAKDPRPTNRPL*R--PCYKLISRLIQGI 211
           +P+G +G  GP G    P +T +  P+  T ++  PR T  P     P  + I +++Q +
Sbjct: 508 TPIGPIGPIGPTGPAAPPGSTGSGGPTGPTVSSAAPRETTSPTSESGPNQQFIQQMVQAL 567

>TONB_PASMU (Q9ZH79) Protein tonB|
          Length = 256

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 46  PRWPTRPKWPSRPHHKP*CHPRVAPINPRRQ 138
           P+ P +PK P +P  KP   P+  P  P+++
Sbjct: 91  PKEPEKPKEPEKPKEKPKEKPKEKPKKPKKE 121


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,396,459
Number of Sequences: 219361
Number of extensions: 1418895
Number of successful extensions: 4927
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4887
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5196311029
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)