ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal19f12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK064822.1| Oryza sativa (japonica cultivar-group) cDNA clon... 196 7e-47
2dbj|AK059703.1| Oryza sativa (japonica cultivar-group) cDNA clon... 196 7e-47
3gb|AY109051.1| Zea mays PCO106076 mRNA sequence 127 5e-26
4dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 105 2e-19
5gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 105 2e-19
6emb|AL731891.2|CNS08C8V Oryza sativa chromosome 12, . BAC OJ1374... 105 2e-19
7gb|AY108057.1| Zea mays PCO106075 mRNA sequence 84 7e-13
8ref|XM_469061.1| Oryza sativa (japonica cultivar-group), mRNA 66 2e-07
9dbj|AK066471.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 2e-07
10dbj|AK066436.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 2e-07
11gb|AC120535.5| Oryza sativa (japonica cultivar-group) chromosome... 42 2.3
12gb|AC138004.3| Oryza sativa chromosome 3 BAC OSJNBb0023J24 genom... 42 2.3
13gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 2.3
14emb|CR752642.5| Zebrafish DNA sequence from clone DKEY-165D23 in... 42 2.3
15emb|BX936403.9| Zebrafish DNA sequence from clone CH211-281A24 i... 42 2.3
16dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
17gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold 40 9.0
18gb|AC122395.4| Mus musculus BAC clone RP24-86H17 from chromosome... 40 9.0
19ref|XM_746503.1| Aspergillus fumigatus Af293 hypothetical protei... 40 9.0
20gb|AC145509.2| Gasterosteus aculeatus clone CH213-128O17, comple... 40 9.0
21emb|AL590867.10| Human DNA sequence from clone RP11-475C16 on ch... 40 9.0
22emb|AL358034.18| Human DNA sequence from clone RP11-51K14 on chr... 40 9.0
23emb|BX927071.12| Zebrafish DNA sequence from clone DKEY-286O23 i... 40 9.0
24gb|AC146534.3| Otolemur garnettii clone CH256-50E17, complete se... 40 9.0
25gb|AC009474.4| Homo sapiens BAC clone RP11-179G23 from 2, comple... 40 9.0
26gb|AC107317.3| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 9.0
27dbj|AP001979.7| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 9.0
28emb|CT573151.3| Platypus DNA sequence from clone CLM1-42M21, com... 40 9.0
29gb|CP000225.1| Drosophila melanogaster genomic scaffold 21100002... 40 9.0
30gb|CP000223.1| Drosophila melanogaster genomic scaffold 21100002... 40 9.0
31gb|CP000203.1| Drosophila melanogaster genomic scaffold 21100002... 40 9.0
32gb|CP000191.1| Drosophila melanogaster genomic scaffold 21100002... 40 9.0
33gb|AC154374.1| Mus musculus BAC clone RP23-81F24 from 9, complet... 40 9.0 
>dbj|AK064822.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F01, full
            insert sequence
          Length = 2516

 Score =  196 bits (99), Expect = 7e-47
 Identities = 252/303 (83%)
 Strand = Plus / Minus

                                                                        
Query: 359  ctaggccacaaaccctgatgaagacgaagacccgtatatctcgtttgcctgagccaggga 418
            |||||||||||| ||||||||||| || || ||||||||||| |  || || ||||  | 
Sbjct: 2110 ctaggccacaaatcctgatgaagatgatgaaccgtatatctcttccgcttgcgccaccgg 2051

                                                                        
Query: 419  gacgtacacgacgtccgtcagcgagctgtgggtccgtccgtagaaaatgtacacgaagac 478
             || ||||| ||||| ||||  |||||||||||||| || ||||||||||||||||| ||
Sbjct: 2050 aacatacaccacgtcggtcaatgagctgtgggtccggccatagaaaatgtacacgaatac 1991

                                                                        
Query: 479  ccccattaccagccataccccgacccgcatccacgtgccaccccctagatttatgagcaa 538
             |||||||||||||||||||| || | |||||| || || || || |  ||||  | |||
Sbjct: 1990 tcccattaccagccataccccaactctcatccatgtccctccacccaagtttactaacaa 1931

                                                                        
Query: 539  gtatgtgtttatgagaatgcacatcaccggcagcagtggaacgaatgggcagatgaatcc 598
            ||||||||| | ||| |||||||||||||||| ||  |||||||| ||||||||||||||
Sbjct: 1930 gtatgtgttcacgaggatgcacatcaccggcaacaacggaacgaaggggcagatgaatcc 1871

                                                                        
Query: 599  tccagaatgaccaaatgagtgccttccatcgtcttggtcgatccaggagagcacacccag 658
            |||||| ||||||||||||||||| || || |||||||||||  || |||| ||||| ||
Sbjct: 1870 tccagagtgaccaaatgagtgcctcccgtcatcttggtcgatatagcagaggacaccgag 1811

               
Query: 659  acc 661
            |||
Sbjct: 1810 acc 1808
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>dbj|AK059703.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-D03, full
            insert sequence
          Length = 2272

 Score =  196 bits (99), Expect = 7e-47
 Identities = 252/303 (83%)
 Strand = Plus / Minus

                                                                        
Query: 359  ctaggccacaaaccctgatgaagacgaagacccgtatatctcgtttgcctgagccaggga 418
            |||||||||||| ||||||||||| || || ||||||||||| |  || || ||||  | 
Sbjct: 1866 ctaggccacaaatcctgatgaagatgatgaaccgtatatctcttccgcttgcgccaccgg 1807

                                                                        
Query: 419  gacgtacacgacgtccgtcagcgagctgtgggtccgtccgtagaaaatgtacacgaagac 478
             || ||||| ||||| ||||  |||||||||||||| || ||||||||||||||||| ||
Sbjct: 1806 aacatacaccacgtcggtcaatgagctgtgggtccggccatagaaaatgtacacgaatac 1747

                                                                        
Query: 479  ccccattaccagccataccccgacccgcatccacgtgccaccccctagatttatgagcaa 538
             |||||||||||||||||||| || | |||||| || || || || |  ||||  | |||
Sbjct: 1746 tcccattaccagccataccccaactctcatccatgtccctccacccaagtttactaacaa 1687

                                                                        
Query: 539  gtatgtgtttatgagaatgcacatcaccggcagcagtggaacgaatgggcagatgaatcc 598
            ||||||||| | ||| |||||||||||||||| ||  |||||||| ||||||||||||||
Sbjct: 1686 gtatgtgttcacgaggatgcacatcaccggcaacaacggaacgaaggggcagatgaatcc 1627

                                                                        
Query: 599  tccagaatgaccaaatgagtgccttccatcgtcttggtcgatccaggagagcacacccag 658
            |||||| ||||||||||||||||| || || |||||||||||  || |||| ||||| ||
Sbjct: 1626 tccagagtgaccaaatgagtgcctcccgtcatcttggtcgatatagcagaggacaccgag 1567

               
Query: 659  acc 661
            |||
Sbjct: 1566 acc 1564
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>gb|AY109051.1| Zea mays PCO106076 mRNA sequence
          Length = 1172

 Score =  127 bits (64), Expect = 5e-26
 Identities = 190/232 (81%)
 Strand = Plus / Minus

                                                                       
Query: 420 acgtacacgacgtccgtcagcgagctgtgggtccgtccgtagaaaatgtacacgaagacc 479
           ||||| ||||| || || || ||||||||||| ||||||||||||||||||| ||  || 
Sbjct: 829 acgtagacgacatctgttagggagctgtgggttcgtccgtagaaaatgtacaggagaaca 770

                                                                       
Query: 480 cccattaccagccataccccgacccgcatccacgtgccaccccctagatttatgagcaag 539
           ||||| | ||||||||  || || | |||||| ||| |||| || || ||||| | ||  
Sbjct: 769 cccatcagcagccatatgccaactctcatccatgtgtcaccacccaggtttatcaacaga 710

                                                                       
Query: 540 tatgtgtttatgagaatgcacatcaccggcagcagtggaacgaatgggcagatgaatcct 599
           || || ||||| || |||||||  || ||||||| |||||| || |||||  ||||||||
Sbjct: 709 tacgtatttatcaggatgcacaaaactggcagcactggaacaaaagggcatgtgaatcct 650

                                                               
Query: 600 ccagaatgaccaaatgagtgccttccatcgtcttggtcgatccaggagagca 651
           |||||||||||||| |||||||| ||| | ||||||||||||||||||||||
Sbjct: 649 ccagaatgaccaaaagagtgcctgccagcatcttggtcgatccaggagagca 598
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  105 bits (53), Expect = 2e-19
 Identities = 119/141 (84%)
 Strand = Plus / Plus

                                                                            
Query: 359      ctaggccacaaaccctgatgaagacgaagacccgtatatctcgtttgcctgagccaggga 418
                |||||||||||| ||||||||||| || || ||||||||||| |  || || ||||  | 
Sbjct: 26655170 ctaggccacaaatcctgatgaagatgatgaaccgtatatctcttccgcttgcgccaccgg 26655229

                                                                            
Query: 419      gacgtacacgacgtccgtcagcgagctgtgggtccgtccgtagaaaatgtacacgaagac 478
                 || ||||| ||||| ||||  |||||||||||||| || ||||||||||||||||| ||
Sbjct: 26655230 aacatacaccacgtcggtcaatgagctgtgggtccggccatagaaaatgtacacgaatac 26655289

                                     
Query: 479      ccccattaccagccatacccc 499
                 ||||||||||||||||||||
Sbjct: 26655290 tcccattaccagccatacccc 26655310



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                            
Query: 536      caagtatgtgtttatgagaatgcacatcaccggcagcagtggaacgaatgggcagatgaa 595
                |||||||||||| | ||| |||||||||||||||| ||  |||||||| |||||||||||
Sbjct: 26655443 caagtatgtgttcacgaggatgcacatcaccggcaacaacggaacgaaggggcagatgaa 26655502

                    
Query: 596      tcct 599
                ||||
Sbjct: 26655503 tcct 26655506



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                            
Query: 597      cctccagaatgaccaaatgagtgccttccatcgtcttggtcgatccaggagagcacaccc 656
                |||||||| ||||||||||||||||| || || |||||||||||  || |||| ||||| 
Sbjct: 26655602 cctccagagtgaccaaatgagtgcctcccgtcatcttggtcgatatagcagaggacaccg 26655661

                     
Query: 657      agacc 661
                |||||
Sbjct: 26655662 agacc 26655666
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  105 bits (53), Expect = 2e-19
 Identities = 119/141 (84%)
 Strand = Plus / Plus

                                                                            
Query: 359      ctaggccacaaaccctgatgaagacgaagacccgtatatctcgtttgcctgagccaggga 418
                |||||||||||| ||||||||||| || || ||||||||||| |  || || ||||  | 
Sbjct: 26583339 ctaggccacaaatcctgatgaagatgatgaaccgtatatctcttccgcttgcgccaccgg 26583398

                                                                            
Query: 419      gacgtacacgacgtccgtcagcgagctgtgggtccgtccgtagaaaatgtacacgaagac 478
                 || ||||| ||||| ||||  |||||||||||||| || ||||||||||||||||| ||
Sbjct: 26583399 aacatacaccacgtcggtcaatgagctgtgggtccggccatagaaaatgtacacgaatac 26583458

                                     
Query: 479      ccccattaccagccatacccc 499
                 ||||||||||||||||||||
Sbjct: 26583459 tcccattaccagccatacccc 26583479



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                            
Query: 536      caagtatgtgtttatgagaatgcacatcaccggcagcagtggaacgaatgggcagatgaa 595
                |||||||||||| | ||| |||||||||||||||| ||  |||||||| |||||||||||
Sbjct: 26583612 caagtatgtgttcacgaggatgcacatcaccggcaacaacggaacgaaggggcagatgaa 26583671

                    
Query: 596      tcct 599
                ||||
Sbjct: 26583672 tcct 26583675



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                            
Query: 597      cctccagaatgaccaaatgagtgccttccatcgtcttggtcgatccaggagagcacaccc 656
                |||||||| ||||||||||||||||| || || |||||||||||  || |||| ||||| 
Sbjct: 26583771 cctccagagtgaccaaatgagtgcctcccgtcatcttggtcgatatagcagaggacaccg 26583830

                     
Query: 657      agacc 661
                |||||
Sbjct: 26583831 agacc 26583835
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>emb|AL731891.2|CNS08C8V Oryza sativa chromosome 12, . BAC OJ1374_A04 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 101173

 Score =  105 bits (53), Expect = 2e-19
 Identities = 119/141 (84%)
 Strand = Plus / Plus

                                                                         
Query: 359   ctaggccacaaaccctgatgaagacgaagacccgtatatctcgtttgcctgagccaggga 418
             |||||||||||| ||||||||||| || || ||||||||||| |  || || ||||  | 
Sbjct: 74040 ctaggccacaaatcctgatgaagatgatgaaccgtatatctcttccgcttgcgccaccgg 74099

                                                                         
Query: 419   gacgtacacgacgtccgtcagcgagctgtgggtccgtccgtagaaaatgtacacgaagac 478
              || ||||| ||||| ||||  |||||||||||||| || ||||||||||||||||| ||
Sbjct: 74100 aacatacaccacgtcggtcaatgagctgtgggtccggccatagaaaatgtacacgaatac 74159

                                  
Query: 479   ccccattaccagccatacccc 499
              ||||||||||||||||||||
Sbjct: 74160 tcccattaccagccatacccc 74180



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                         
Query: 536   caagtatgtgtttatgagaatgcacatcaccggcagcagtggaacgaatgggcagatgaa 595
             |||||||||||| | ||| |||||||||||||||| ||  |||||||| |||||||||||
Sbjct: 74313 caagtatgtgttcacgaggatgcacatcaccggcaacaacggaacgaaggggcagatgaa 74372

                 
Query: 596   tcct 599
             ||||
Sbjct: 74373 tcct 74376



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                         
Query: 597   cctccagaatgaccaaatgagtgccttccatcgtcttggtcgatccaggagagcacaccc 656
             |||||||| ||||||||||||||||| || || |||||||||||  || |||| ||||| 
Sbjct: 74472 cctccagagtgaccaaatgagtgcctcccgtcatcttggtcgatatagcagaggacaccg 74531

                  
Query: 657   agacc 661
             |||||
Sbjct: 74532 agacc 74536
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>gb|AY108057.1| Zea mays PCO106075 mRNA sequence
          Length = 668

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                       
Query: 570 agcagtggaacgaatgggcagatgaatcctccagaatgaccaaatgagtgccttccatcg 629
           |||| |||||| || |||||  |||||||||| ||||||||||| |||||||| ||| | 
Sbjct: 246 agcactggaacaaaagggcatgtgaatcctccggaatgaccaaaagagtgcctgccagca 187

                                 
Query: 630 tcttggtcgatccaggagagca 651
           ||||||||||||||||||||||
Sbjct: 186 tcttggtcgatccaggagagca 165



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 441 gagctgtgggtccgtccgtagaaa 464
           ||||||||||| ||||||||||||
Sbjct: 375 gagctgtgggttcgtccgtagaaa 352
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>ref|XM_469061.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2208

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 102/125 (81%)
 Strand = Plus / Minus

                                                                        
Query: 525  agatttatgagcaagtatgtgtttatgagaatgcacatcaccggcagcagtggaacgaat 584
            |||||||| | || ||||||||||| ||| ||  |||  || ||||| ||||||||||| 
Sbjct: 1760 agatttatcaacaggtatgtgtttacgaggatagacaagactggcagaagtggaacgaaa 1701

                                                                        
Query: 585  gggcagatgaatcctccagaatgaccaaatgagtgccttccatcgtcttggtcgatccag 644
            |||||  | ||||||||||| || || || || ||||| ||||| |||||||||||||||
Sbjct: 1700 gggcatgtaaatcctccagattggccgaaagaatgcctgccatcatcttggtcgatccag 1641

                 
Query: 645  gagag 649
             ||||
Sbjct: 1640 cagag 1636
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>dbj|AK066471.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013066A08, full
            insert sequence
          Length = 2110

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 102/125 (81%)
 Strand = Plus / Minus

                                                                        
Query: 525  agatttatgagcaagtatgtgtttatgagaatgcacatcaccggcagcagtggaacgaat 584
            |||||||| | || ||||||||||| ||| ||  |||  || ||||| ||||||||||| 
Sbjct: 1669 agatttatcaacaggtatgtgtttacgaggatagacaagactggcagaagtggaacgaaa 1610

                                                                        
Query: 585  gggcagatgaatcctccagaatgaccaaatgagtgccttccatcgtcttggtcgatccag 644
            |||||  | ||||||||||| || || || || ||||| ||||| |||||||||||||||
Sbjct: 1609 gggcatgtaaatcctccagattggccgaaagaatgcctgccatcatcttggtcgatccag 1550

                 
Query: 645  gagag 649
             ||||
Sbjct: 1549 cagag 1545
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>dbj|AK066436.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063A11, full
            insert sequence
          Length = 2455

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 102/125 (81%)
 Strand = Plus / Minus

                                                                        
Query: 525  agatttatgagcaagtatgtgtttatgagaatgcacatcaccggcagcagtggaacgaat 584
            |||||||| | || ||||||||||| ||| ||  |||  || ||||| ||||||||||| 
Sbjct: 2024 agatttatcaacaggtatgtgtttacgaggatagacaagactggcagaagtggaacgaaa 1965

                                                                        
Query: 585  gggcagatgaatcctccagaatgaccaaatgagtgccttccatcgtcttggtcgatccag 644
            |||||  | ||||||||||| || || || || ||||| ||||| |||||||||||||||
Sbjct: 1964 gggcatgtaaatcctccagattggccgaaagaatgcctgccatcatcttggtcgatccag 1905

                 
Query: 645  gagag 649
             ||||
Sbjct: 1904 cagag 1900
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>gb|AC120535.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0092N01,
              complete sequence
          Length = 161741

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                   
Query: 597    cctccagaatgaccaaatgagtgccttccatcgtcttggtcgatccaggagag 649
              |||||||| || || || || ||||| ||||| ||||||||||||||| ||||
Sbjct: 114781 cctccagattggccgaaagaatgcctgccatcatcttggtcgatccagcagag 114833
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>gb|AC138004.3| Oryza sativa chromosome 3 BAC OSJNBb0023J24 genomic sequence, complete
             sequence
          Length = 130193

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                  
Query: 597   cctccagaatgaccaaatgagtgccttccatcgtcttggtcgatccaggagag 649
             |||||||| || || || || ||||| ||||| ||||||||||||||| ||||
Sbjct: 83966 cctccagattggccgaaagaatgcctgccatcatcttggtcgatccagcagag 83914
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                     
Query: 597      cctccagaatgaccaaatgagtgccttccatcgtcttggtcgatccaggagag 649
                |||||||| || || || || ||||| ||||| ||||||||||||||| ||||
Sbjct: 25218742 cctccagattggccgaaagaatgcctgccatcatcttggtcgatccagcagag 25218794
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>emb|CR752642.5| Zebrafish DNA sequence from clone DKEY-165D23 in linkage group 5,
           complete sequence
          Length = 16751

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 69  gcaaatgaatcagccctcgca 89
           |||||||||||||||||||||
Sbjct: 249 gcaaatgaatcagccctcgca 229
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>emb|BX936403.9| Zebrafish DNA sequence from clone CH211-281A24 in linkage group 5,
              complete sequence
          Length = 142908

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 69     gcaaatgaatcagccctcgca 89
              |||||||||||||||||||||
Sbjct: 141157 gcaaatgaatcagccctcgca 141137
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                     
Query: 597      cctccagaatgaccaaatgagtgccttccatcgtcttggtcgatccaggagag 649
                |||||||| || || || || ||||| ||||| ||||||||||||||| ||||
Sbjct: 25310114 cctccagattggccgaaagaatgcctgccatcatcttggtcgatccagcagag 25310166
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>gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold
          Length = 1743090

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 132    tttatacatattaactattt 151
              ||||||||||||||||||||
Sbjct: 322619 tttatacatattaactattt 322600
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>gb|AC122395.4| Mus musculus BAC clone RP24-86H17 from chromosome 9, complete sequence
          Length = 203891

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 401    gtttgcctgagccagggaga 420
              ||||||||||||||||||||
Sbjct: 193511 gtttgcctgagccagggaga 193530
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>ref|XM_746503.1| Aspergillus fumigatus Af293 hypothetical protein (Afu4g12350) partial
            mRNA
          Length = 1500

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 307  tcagggtgcttgaggtctccgtga 330
            ||||||||||||||||||| ||||
Sbjct: 1411 tcagggtgcttgaggtctcggtga 1388
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>gb|AC145509.2| Gasterosteus aculeatus clone CH213-128O17, complete sequence
          Length = 213989

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 97     gcattgctgcacacattgca 116
              ||||||||||||||||||||
Sbjct: 211860 gcattgctgcacacattgca 211841
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>emb|AL590867.10| Human DNA sequence from clone RP11-475C16 on chromosome 6 Contains a
             ribosomal protein L27a (60S ribosomal protein L27a)
             (RPL27A) pseudogene and a novel gene, complete sequence
          Length = 63621

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   acttctatttatacatatta 144
             ||||||||||||||||||||
Sbjct: 14745 acttctatttatacatatta 14726
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>emb|AL358034.18| Human DNA sequence from clone RP11-51K14 on chromosome 10, complete
             sequence
          Length = 108373

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 355   ttctctaggccacaaaccctgatg 378
             ||||||||||||||||||| ||||
Sbjct: 45453 ttctctaggccacaaacccagatg 45430
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>emb|BX927071.12| Zebrafish DNA sequence from clone DKEY-286O23 in linkage group 18,
             complete sequence
          Length = 143863

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   atacatattaactatttaca 154
             ||||||||||||||||||||
Sbjct: 83431 atacatattaactatttaca 83412
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>gb|AC146534.3| Otolemur garnettii clone CH256-50E17, complete sequence
          Length = 139631

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 132    tttatacatattaactattt 151
              ||||||||||||||||||||
Sbjct: 133113 tttatacatattaactattt 133094
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>gb|AC009474.4| Homo sapiens BAC clone RP11-179G23 from 2, complete sequence
          Length = 168651

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 640   tccaggagagcacacccaga 659
             ||||||||||||||||||||
Sbjct: 50846 tccaggagagcacacccaga 50865
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>gb|AC107317.3| Mus musculus strain C57BL6/J chromosome 6 clone RP23-340A17, complete
              sequence
          Length = 228371

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 266    atgcaggatgcagcagcaac 285
              ||||||||||||||||||||
Sbjct: 207380 atgcaggatgcagcagcaac 207399
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>dbj|AP001979.7| Homo sapiens genomic DNA, chromosome 11 clone:RP11-259P6, complete
             sequence
          Length = 147533

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 401   gtttgcctgagccagggaga 420
             ||||||||||||||||||||
Sbjct: 28201 gtttgcctgagccagggaga 28220
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>emb|CT573151.3| Platypus DNA sequence from clone CLM1-42M21, complete sequence
          Length = 120606

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 440   cgagctgtgggtccgtccgt 459
             ||||||||||||||||||||
Sbjct: 55476 cgagctgtgggtccgtccgt 55457
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>gb|CP000225.1| Drosophila melanogaster genomic scaffold 211000022280724
          Length = 820587

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 95     tcgcattgctgcacacattg 114
              ||||||||||||||||||||
Sbjct: 430043 tcgcattgctgcacacattg 430062
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>gb|CP000223.1| Drosophila melanogaster genomic scaffold 211000022280790
          Length = 626829

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    tcttacacttctatttatac 138
              ||||||||||||||||||||
Sbjct: 559851 tcttacacttctatttatac 559832
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>gb|CP000203.1| Drosophila melanogaster genomic scaffold 211000022280760
          Length = 90124

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   tcttacacttctatttatac 138
             ||||||||||||||||||||
Sbjct: 36176 tcttacacttctatttatac 36157
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>gb|CP000191.1| Drosophila melanogaster genomic scaffold 211000022280172
          Length = 132906

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   tcttacacttctatttatac 138
             ||||||||||||||||||||
Sbjct: 30245 tcttacacttctatttatac 30264
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>gb|AC154374.1| Mus musculus BAC clone RP23-81F24 from 9, complete sequence
          Length = 169272

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 401    gtttgcctgagccagggaga 420
              ||||||||||||||||||||
Sbjct: 132446 gtttgcctgagccagggaga 132427


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,945,496
Number of Sequences: 3902068
Number of extensions: 4945496
Number of successful extensions: 109155
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108940
Number of HSP's gapped (non-prelim): 214
length of query: 662
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 639
effective length of database: 17,143,297,704
effective search space: 10954567232856
effective search space used: 10954567232856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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