| Clone Name | rbaal19f11 |
|---|---|
| Clone Library Name | barley_pub |
>RS23_FRAAN (P46297) 40S ribosomal protein S23 (S12)| Length = 142 Score = 55.5 bits (132), Expect(2) = 3e-13 Identities = 26/26 (100%), Positives = 26/26 (100%) Frame = -2 Query: 263 VLIAGFGRKGHAVGDIPGVRFKVVKV 186 VLIAGFGRKGHAVGDIPGVRFKVVKV Sbjct: 99 VLIAGFGRKGHAVGDIPGVRFKVVKV 124 Score = 37.0 bits (84), Expect(2) = 3e-13 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = -3 Query: 190 RCAGVSLLALFKEKKEKPRS 131 + +GVSLLALFKEKKEKPRS Sbjct: 123 KVSGVSLLALFKEKKEKPRS 142
>RS23_EUPES (Q9M5Z9) 40S ribosomal protein S23| Length = 142 Score = 55.5 bits (132), Expect(2) = 3e-13 Identities = 26/26 (100%), Positives = 26/26 (100%) Frame = -2 Query: 263 VLIAGFGRKGHAVGDIPGVRFKVVKV 186 VLIAGFGRKGHAVGDIPGVRFKVVKV Sbjct: 99 VLIAGFGRKGHAVGDIPGVRFKVVKV 124 Score = 37.0 bits (84), Expect(2) = 3e-13 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = -3 Query: 190 RCAGVSLLALFKEKKEKPRS 131 + +GVSLLALFKEKKEKPRS Sbjct: 123 KVSGVSLLALFKEKKEKPRS 142
>RS23B_ARATH (P49201) 40S ribosomal protein S23-2 (S12)| Length = 142 Score = 55.5 bits (132), Expect(2) = 3e-13 Identities = 26/26 (100%), Positives = 26/26 (100%) Frame = -2 Query: 263 VLIAGFGRKGHAVGDIPGVRFKVVKV 186 VLIAGFGRKGHAVGDIPGVRFKVVKV Sbjct: 99 VLIAGFGRKGHAVGDIPGVRFKVVKV 124 Score = 37.0 bits (84), Expect(2) = 3e-13 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = -3 Query: 190 RCAGVSLLALFKEKKEKPRS 131 + +GVSLLALFKEKKEKPRS Sbjct: 123 KVSGVSLLALFKEKKEKPRS 142
>RS23A_ARATH (Q9SF35) 40S ribosomal protein S23-1 (S12)| Length = 142 Score = 55.5 bits (132), Expect(2) = 3e-13 Identities = 26/26 (100%), Positives = 26/26 (100%) Frame = -2 Query: 263 VLIAGFGRKGHAVGDIPGVRFKVVKV 186 VLIAGFGRKGHAVGDIPGVRFKVVKV Sbjct: 99 VLIAGFGRKGHAVGDIPGVRFKVVKV 124 Score = 37.0 bits (84), Expect(2) = 3e-13 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = -3 Query: 190 RCAGVSLLALFKEKKEKPRS 131 + +GVSLLALFKEKKEKPRS Sbjct: 123 KVSGVSLLALFKEKKEKPRS 142
>RS23_SPOFR (Q962Q7) 40S ribosomal protein S23| Length = 143 Score = 55.1 bits (131), Expect(2) = 4e-12 Identities = 25/26 (96%), Positives = 26/26 (100%) Frame = -2 Query: 263 VLIAGFGRKGHAVGDIPGVRFKVVKV 186 VL+AGFGRKGHAVGDIPGVRFKVVKV Sbjct: 100 VLVAGFGRKGHAVGDIPGVRFKVVKV 125 Score = 33.5 bits (75), Expect(2) = 4e-12 Identities = 15/20 (75%), Positives = 18/20 (90%) Frame = -3 Query: 190 RCAGVSLLALFKEKKEKPRS 131 + A VSLLAL+KEKKE+PRS Sbjct: 124 KVANVSLLALYKEKKERPRS 143
>RS23_PAPDA (Q6EV23) 40S ribosomal protein S23| Length = 143 Score = 55.1 bits (131), Expect(2) = 4e-12 Identities = 25/26 (96%), Positives = 26/26 (100%) Frame = -2 Query: 263 VLIAGFGRKGHAVGDIPGVRFKVVKV 186 VL+AGFGRKGHAVGDIPGVRFKVVKV Sbjct: 100 VLVAGFGRKGHAVGDIPGVRFKVVKV 125 Score = 33.5 bits (75), Expect(2) = 4e-12 Identities = 15/20 (75%), Positives = 18/20 (90%) Frame = -3 Query: 190 RCAGVSLLALFKEKKEKPRS 131 + A VSLLAL+KEKKE+PRS Sbjct: 124 KVANVSLLALYKEKKERPRS 143
>RS23_DROME (Q8T3U2) 40S ribosomal protein S23| Length = 143 Score = 55.1 bits (131), Expect(2) = 4e-12 Identities = 25/26 (96%), Positives = 26/26 (100%) Frame = -2 Query: 263 VLIAGFGRKGHAVGDIPGVRFKVVKV 186 VL+AGFGRKGHAVGDIPGVRFKVVKV Sbjct: 100 VLVAGFGRKGHAVGDIPGVRFKVVKV 125 Score = 33.5 bits (75), Expect(2) = 4e-12 Identities = 15/20 (75%), Positives = 18/20 (90%) Frame = -3 Query: 190 RCAGVSLLALFKEKKEKPRS 131 + A VSLLAL+KEKKE+PRS Sbjct: 124 KVANVSLLALYKEKKERPRS 143
>RS23_DERVA (Q86FP7) 40S ribosomal protein S23| Length = 143 Score = 55.1 bits (131), Expect(2) = 4e-12 Identities = 25/26 (96%), Positives = 26/26 (100%) Frame = -2 Query: 263 VLIAGFGRKGHAVGDIPGVRFKVVKV 186 VL+AGFGRKGHAVGDIPGVRFKVVKV Sbjct: 100 VLVAGFGRKGHAVGDIPGVRFKVVKV 125 Score = 33.5 bits (75), Expect(2) = 4e-12 Identities = 15/20 (75%), Positives = 18/20 (90%) Frame = -3 Query: 190 RCAGVSLLALFKEKKEKPRS 131 + A VSLLAL+KEKKE+PRS Sbjct: 124 KVANVSLLALYKEKKERPRS 143
>RS23_LUMRU (Q9GRJ3) 40S ribosomal protein S23| Length = 143 Score = 55.1 bits (131), Expect(2) = 1e-11 Identities = 25/26 (96%), Positives = 26/26 (100%) Frame = -2 Query: 263 VLIAGFGRKGHAVGDIPGVRFKVVKV 186 VL+AGFGRKGHAVGDIPGVRFKVVKV Sbjct: 100 VLVAGFGRKGHAVGDIPGVRFKVVKV 125 Score = 32.3 bits (72), Expect(2) = 1e-11 Identities = 14/20 (70%), Positives = 18/20 (90%) Frame = -3 Query: 190 RCAGVSLLALFKEKKEKPRS 131 + A VSLLAL+K+KKE+PRS Sbjct: 124 KVASVSLLALYKQKKERPRS 143
>RS23_ICTPU (Q90YQ1) 40S ribosomal protein S23| Length = 143 Score = 55.1 bits (131), Expect(2) = 3e-11 Identities = 25/26 (96%), Positives = 26/26 (100%) Frame = -2 Query: 263 VLIAGFGRKGHAVGDIPGVRFKVVKV 186 VL+AGFGRKGHAVGDIPGVRFKVVKV Sbjct: 100 VLVAGFGRKGHAVGDIPGVRFKVVKV 125 Score = 30.8 bits (68), Expect(2) = 3e-11 Identities = 14/20 (70%), Positives = 17/20 (85%) Frame = -3 Query: 190 RCAGVSLLALFKEKKEKPRS 131 + A VSLLAL+K KKE+PRS Sbjct: 124 KVANVSLLALYKGKKERPRS 143
>RS23_CHILA (P62298) 40S ribosomal protein S23| Length = 143 Score = 55.1 bits (131), Expect(2) = 3e-11 Identities = 25/26 (96%), Positives = 26/26 (100%) Frame = -2 Query: 263 VLIAGFGRKGHAVGDIPGVRFKVVKV 186 VL+AGFGRKGHAVGDIPGVRFKVVKV Sbjct: 100 VLVAGFGRKGHAVGDIPGVRFKVVKV 125 Score = 30.8 bits (68), Expect(2) = 3e-11 Identities = 14/20 (70%), Positives = 17/20 (85%) Frame = -3 Query: 190 RCAGVSLLALFKEKKEKPRS 131 + A VSLLAL+K KKE+PRS Sbjct: 124 KVANVSLLALYKGKKERPRS 143
>RS23_RAT (P62268) 40S ribosomal protein S23| Length = 142 Score = 55.1 bits (131), Expect(2) = 3e-11 Identities = 25/26 (96%), Positives = 26/26 (100%) Frame = -2 Query: 263 VLIAGFGRKGHAVGDIPGVRFKVVKV 186 VL+AGFGRKGHAVGDIPGVRFKVVKV Sbjct: 99 VLVAGFGRKGHAVGDIPGVRFKVVKV 124 Score = 30.8 bits (68), Expect(2) = 3e-11 Identities = 14/20 (70%), Positives = 17/20 (85%) Frame = -3 Query: 190 RCAGVSLLALFKEKKEKPRS 131 + A VSLLAL+K KKE+PRS Sbjct: 123 KVANVSLLALYKGKKERPRS 142
>RS23_PIG (Q6SA96) 40S ribosomal protein S23| Length = 142 Score = 55.1 bits (131), Expect(2) = 3e-11 Identities = 25/26 (96%), Positives = 26/26 (100%) Frame = -2 Query: 263 VLIAGFGRKGHAVGDIPGVRFKVVKV 186 VL+AGFGRKGHAVGDIPGVRFKVVKV Sbjct: 99 VLVAGFGRKGHAVGDIPGVRFKVVKV 124 Score = 30.8 bits (68), Expect(2) = 3e-11 Identities = 14/20 (70%), Positives = 17/20 (85%) Frame = -3 Query: 190 RCAGVSLLALFKEKKEKPRS 131 + A VSLLAL+K KKE+PRS Sbjct: 123 KVANVSLLALYKGKKERPRS 142
>RS23_MOUSE (P62267) 40S ribosomal protein S23| Length = 142 Score = 55.1 bits (131), Expect(2) = 3e-11 Identities = 25/26 (96%), Positives = 26/26 (100%) Frame = -2 Query: 263 VLIAGFGRKGHAVGDIPGVRFKVVKV 186 VL+AGFGRKGHAVGDIPGVRFKVVKV Sbjct: 99 VLVAGFGRKGHAVGDIPGVRFKVVKV 124 Score = 30.8 bits (68), Expect(2) = 3e-11 Identities = 14/20 (70%), Positives = 17/20 (85%) Frame = -3 Query: 190 RCAGVSLLALFKEKKEKPRS 131 + A VSLLAL+K KKE+PRS Sbjct: 123 KVANVSLLALYKGKKERPRS 142
>RS23_HUMAN (P62266) 40S ribosomal protein S23| Length = 142 Score = 55.1 bits (131), Expect(2) = 3e-11 Identities = 25/26 (96%), Positives = 26/26 (100%) Frame = -2 Query: 263 VLIAGFGRKGHAVGDIPGVRFKVVKV 186 VL+AGFGRKGHAVGDIPGVRFKVVKV Sbjct: 99 VLVAGFGRKGHAVGDIPGVRFKVVKV 124 Score = 30.8 bits (68), Expect(2) = 3e-11 Identities = 14/20 (70%), Positives = 17/20 (85%) Frame = -3 Query: 190 RCAGVSLLALFKEKKEKPRS 131 + A VSLLAL+K KKE+PRS Sbjct: 123 KVANVSLLALYKGKKERPRS 142
>RS23_BRUMA (P90707) 40S ribosomal protein S23| Length = 143 Score = 54.7 bits (130), Expect(2) = 8e-11 Identities = 24/26 (92%), Positives = 26/26 (100%) Frame = -2 Query: 263 VLIAGFGRKGHAVGDIPGVRFKVVKV 186 VL+AGFGRKGHAVGDIPGVRFK+VKV Sbjct: 100 VLVAGFGRKGHAVGDIPGVRFKIVKV 125 Score = 29.6 bits (65), Expect(2) = 8e-11 Identities = 13/20 (65%), Positives = 16/20 (80%) Frame = -3 Query: 190 RCAGVSLLALFKEKKEKPRS 131 + A SL+ALFK KKE+PRS Sbjct: 124 KVANTSLIALFKGKKERPRS 143
>RS23_YEAST (P32827) 40S ribosomal protein S23 (S28) (YS14) (RP37)| Length = 145 Score = 48.9 bits (115), Expect(2) = 1e-10 Identities = 23/26 (88%), Positives = 24/26 (92%) Frame = -2 Query: 263 VLIAGFGRKGHAVGDIPGVRFKVVKV 186 VL+AGFGRKG A GDIPGVRFKVVKV Sbjct: 102 VLLAGFGRKGKAKGDIPGVRFKVVKV 127 Score = 35.0 bits (79), Expect(2) = 1e-10 Identities = 16/20 (80%), Positives = 19/20 (95%) Frame = -3 Query: 190 RCAGVSLLALFKEKKEKPRS 131 + +GVSLLAL+KEKKEKPRS Sbjct: 126 KVSGVSLLALWKEKKEKPRS 145
>RS23_SACCA (Q6YIA2) 40S ribosomal protein S23| Length = 145 Score = 48.9 bits (115), Expect(2) = 1e-10 Identities = 23/26 (88%), Positives = 24/26 (92%) Frame = -2 Query: 263 VLIAGFGRKGHAVGDIPGVRFKVVKV 186 VL+AGFGRKG A GDIPGVRFKVVKV Sbjct: 102 VLLAGFGRKGKAKGDIPGVRFKVVKV 127 Score = 35.0 bits (79), Expect(2) = 1e-10 Identities = 16/20 (80%), Positives = 19/20 (95%) Frame = -3 Query: 190 RCAGVSLLALFKEKKEKPRS 131 + +GVSLLAL+KEKKEKPRS Sbjct: 126 KVSGVSLLALWKEKKEKPRS 145
>RS23_SACBA (Q6YIA3) 40S ribosomal protein S23| Length = 145 Score = 48.9 bits (115), Expect(2) = 1e-10 Identities = 23/26 (88%), Positives = 24/26 (92%) Frame = -2 Query: 263 VLIAGFGRKGHAVGDIPGVRFKVVKV 186 VL+AGFGRKG A GDIPGVRFKVVKV Sbjct: 102 VLLAGFGRKGKAKGDIPGVRFKVVKV 127 Score = 35.0 bits (79), Expect(2) = 1e-10 Identities = 16/20 (80%), Positives = 19/20 (95%) Frame = -3 Query: 190 RCAGVSLLALFKEKKEKPRS 131 + +GVSLLAL+KEKKEKPRS Sbjct: 126 KVSGVSLLALWKEKKEKPRS 145
>RS23_CANGA (Q6FLA8) 40S ribosomal protein S23| Length = 145 Score = 48.9 bits (115), Expect(2) = 1e-10 Identities = 23/26 (88%), Positives = 24/26 (92%) Frame = -2 Query: 263 VLIAGFGRKGHAVGDIPGVRFKVVKV 186 VL+AGFGRKG A GDIPGVRFKVVKV Sbjct: 102 VLLAGFGRKGKAKGDIPGVRFKVVKV 127 Score = 35.0 bits (79), Expect(2) = 1e-10 Identities = 16/20 (80%), Positives = 19/20 (95%) Frame = -3 Query: 190 RCAGVSLLALFKEKKEKPRS 131 + +GVSLLAL+KEKKEKPRS Sbjct: 126 KVSGVSLLALWKEKKEKPRS 145
>RS23_NEUCR (Q9HE74) 40S ribosomal protein S23| Length = 145 Score = 48.9 bits (115), Expect(2) = 3e-10 Identities = 23/26 (88%), Positives = 24/26 (92%) Frame = -2 Query: 263 VLIAGFGRKGHAVGDIPGVRFKVVKV 186 VL+AGFGRKG A GDIPGVRFKVVKV Sbjct: 102 VLLAGFGRKGKAKGDIPGVRFKVVKV 127 Score = 33.5 bits (75), Expect(2) = 3e-10 Identities = 15/20 (75%), Positives = 18/20 (90%) Frame = -3 Query: 190 RCAGVSLLALFKEKKEKPRS 131 + +GV LLAL+KEKKEKPRS Sbjct: 126 KVSGVGLLALWKEKKEKPRS 145
>RS23_ASPFU (Q873W8) 40S ribosomal protein S23| Length = 145 Score = 48.9 bits (115), Expect(2) = 3e-10 Identities = 23/26 (88%), Positives = 24/26 (92%) Frame = -2 Query: 263 VLIAGFGRKGHAVGDIPGVRFKVVKV 186 VL+AGFGRKG A GDIPGVRFKVVKV Sbjct: 102 VLLAGFGRKGKAKGDIPGVRFKVVKV 127 Score = 33.5 bits (75), Expect(2) = 3e-10 Identities = 15/20 (75%), Positives = 18/20 (90%) Frame = -3 Query: 190 RCAGVSLLALFKEKKEKPRS 131 + +GV LLAL+KEKKEKPRS Sbjct: 126 KVSGVGLLALWKEKKEKPRS 145
>RS23_CAEEL (Q19877) 40S ribosomal protein S23| Length = 143 Score = 51.6 bits (122), Expect(2) = 6e-10 Identities = 22/26 (84%), Positives = 25/26 (96%) Frame = -2 Query: 263 VLIAGFGRKGHAVGDIPGVRFKVVKV 186 VL++GFGR GHAVGDIPGVRFK+VKV Sbjct: 100 VLVSGFGRSGHAVGDIPGVRFKIVKV 125 Score = 29.6 bits (65), Expect(2) = 6e-10 Identities = 13/20 (65%), Positives = 16/20 (80%) Frame = -3 Query: 190 RCAGVSLLALFKEKKEKPRS 131 + A SL+ALFK KKE+PRS Sbjct: 124 KVANTSLIALFKGKKERPRS 143
>RS23_CIOIN (Q8I7D5) 40S ribosomal protein S23| Length = 143 Score = 52.8 bits (125), Expect(2) = 2e-09 Identities = 23/26 (88%), Positives = 25/26 (96%) Frame = -2 Query: 263 VLIAGFGRKGHAVGDIPGVRFKVVKV 186 VL+AGFGR GHAVGDIPGVRFK+VKV Sbjct: 100 VLVAGFGRSGHAVGDIPGVRFKIVKV 125 Score = 26.9 bits (58), Expect(2) = 2e-09 Identities = 13/20 (65%), Positives = 15/20 (75%) Frame = -3 Query: 190 RCAGVSLLALFKEKKEKPRS 131 + A VSL ALF KKE+PRS Sbjct: 124 KVANVSLHALFTGKKERPRS 143
>RS23_SCHPO (P79057) 40S ribosomal protein S23| Length = 143 Score = 47.8 bits (112), Expect(2) = 4e-09 Identities = 22/26 (84%), Positives = 24/26 (92%) Frame = -2 Query: 263 VLIAGFGRKGHAVGDIPGVRFKVVKV 186 VL++GFGRKG A GDIPGVRFKVVKV Sbjct: 100 VLLSGFGRKGKAKGDIPGVRFKVVKV 125 Score = 30.8 bits (68), Expect(2) = 4e-09 Identities = 14/20 (70%), Positives = 16/20 (80%) Frame = -3 Query: 190 RCAGVSLLALFKEKKEKPRS 131 + AGV L ALF EKKEKPR+ Sbjct: 124 KVAGVGLSALFHEKKEKPRA 143
>RS23_GILMI (Q9DFR4) 40S ribosomal protein S23| Length = 143 Score = 49.7 bits (117), Expect(2) = 1e-08 Identities = 22/26 (84%), Positives = 25/26 (96%) Frame = -2 Query: 263 VLIAGFGRKGHAVGDIPGVRFKVVKV 186 VL+AGFGRK HAVGDIPGVRFKVV++ Sbjct: 100 VLVAGFGRKXHAVGDIPGVRFKVVEM 125 Score = 26.9 bits (58), Expect(2) = 1e-08 Identities = 12/18 (66%), Positives = 15/18 (83%) Frame = -3 Query: 184 AGVSLLALFKEKKEKPRS 131 A VSLLAL+K KE+P+S Sbjct: 126 ANVSLLALYKGXKERPKS 143
>RS12_TETTH (P06147) 40S ribosomal protein S12| Length = 142 Score = 48.1 bits (113), Expect(2) = 4e-08 Identities = 22/26 (84%), Positives = 24/26 (92%) Frame = -2 Query: 263 VLIAGFGRKGHAVGDIPGVRFKVVKV 186 VL+AG GR+GHAVGDIPGVRFKVV V Sbjct: 101 VLVAGLGRQGHAVGDIPGVRFKVVCV 126 Score = 26.9 bits (58), Expect(2) = 4e-08 Identities = 12/14 (85%), Positives = 13/14 (92%) Frame = -3 Query: 181 GVSLLALFKEKKEK 140 G+SLLALFK KKEK Sbjct: 128 GISLLALFKGKKEK 141
>RS23_ENCCU (Q8SR65) 40S ribosomal protein S23| Length = 140 Score = 43.5 bits (101), Expect = 1e-04 Identities = 18/26 (69%), Positives = 22/26 (84%) Frame = -2 Query: 263 VLIAGFGRKGHAVGDIPGVRFKVVKV 186 V + GFG+KG +VGDIPG+RFKV KV Sbjct: 97 VTVEGFGKKGRSVGDIPGIRFKVCKV 122
>RS12_PYRAE (Q8ZYQ4) 30S ribosomal protein S12P| Length = 147 Score = 34.7 bits (78), Expect(2) = 0.006 Identities = 14/20 (70%), Positives = 18/20 (90%) Frame = -2 Query: 245 GRKGHAVGDIPGVRFKVVKV 186 G +G ++GDIPGVRFKV+KV Sbjct: 110 GPEGRSLGDIPGVRFKVIKV 129 Score = 22.7 bits (47), Expect(2) = 0.006 Identities = 9/15 (60%), Positives = 13/15 (86%) Frame = -3 Query: 181 GVSLLALFKEKKEKP 137 GVSL A+++ KK+KP Sbjct: 131 GVSLWAIWRGKKQKP 145
>RS12_SULAC (P11524) 30S ribosomal protein S12P| Length = 147 Score = 32.7 bits (73), Expect(2) = 0.006 Identities = 16/27 (59%), Positives = 21/27 (77%), Gaps = 1/27 (3%) Frame = -2 Query: 263 VLIAGFGRK-GHAVGDIPGVRFKVVKV 186 V+IAG G G ++GD+PGVR+KVV V Sbjct: 103 VVIAGIGGTLGRSMGDLPGVRYKVVMV 129 Score = 24.6 bits (52), Expect(2) = 0.006 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = -3 Query: 181 GVSLLALFKEKKEKP 137 GVSL AL+K KK+KP Sbjct: 131 GVSLDALYKGKKQKP 145
>RS12_THECE (P29161) 30S ribosomal protein S12P| Length = 147 Score = 35.4 bits (80), Expect(2) = 0.007 Identities = 17/27 (62%), Positives = 22/27 (81%), Gaps = 1/27 (3%) Frame = -2 Query: 263 VLIAGFGR-KGHAVGDIPGVRFKVVKV 186 V+I G G KG ++GDIPG+R+KVVKV Sbjct: 103 VIIEGIGGPKGGSMGDIPGIRYKVVKV 129 Score = 21.6 bits (44), Expect(2) = 0.007 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = -3 Query: 178 VSLLALFKEKKEKPR 134 VSL L K +KEKPR Sbjct: 132 VSLKELVKGRKEKPR 146
>RS12_PYRKO (Q5JE20) 30S ribosomal protein S12P| Length = 147 Score = 35.4 bits (80), Expect(2) = 0.007 Identities = 17/27 (62%), Positives = 22/27 (81%), Gaps = 1/27 (3%) Frame = -2 Query: 263 VLIAGFGR-KGHAVGDIPGVRFKVVKV 186 V+I G G KG ++GDIPG+R+KVVKV Sbjct: 103 VIIEGIGGPKGGSMGDIPGIRYKVVKV 129 Score = 21.6 bits (44), Expect(2) = 0.007 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = -3 Query: 178 VSLLALFKEKKEKPR 134 VSL L K +KEKPR Sbjct: 132 VSLKELVKGRKEKPR 146
>RS12_PYRHO (O59229) 30S ribosomal protein S12P| Length = 147 Score = 35.4 bits (80), Expect(2) = 0.007 Identities = 17/27 (62%), Positives = 22/27 (81%), Gaps = 1/27 (3%) Frame = -2 Query: 263 VLIAGFGR-KGHAVGDIPGVRFKVVKV 186 V+I G G KG ++GDIPG+R+KVVKV Sbjct: 103 VIIEGIGGPKGGSMGDIPGIRYKVVKV 129 Score = 21.6 bits (44), Expect(2) = 0.007 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = -3 Query: 178 VSLLALFKEKKEKPR 134 VSL L K +KEKPR Sbjct: 132 VSLKELVKGRKEKPR 146
>RS12_PYRFU (P61995) 30S ribosomal protein S12P| Length = 147 Score = 35.4 bits (80), Expect(2) = 0.007 Identities = 17/27 (62%), Positives = 22/27 (81%), Gaps = 1/27 (3%) Frame = -2 Query: 263 VLIAGFGR-KGHAVGDIPGVRFKVVKV 186 V+I G G KG ++GDIPG+R+KVVKV Sbjct: 103 VIIEGIGGPKGGSMGDIPGIRYKVVKV 129 Score = 21.6 bits (44), Expect(2) = 0.007 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = -3 Query: 178 VSLLALFKEKKEKPR 134 VSL L K +KEKPR Sbjct: 132 VSLKELVKGRKEKPR 146
>RS12_PYRAB (P61994) 30S ribosomal protein S12P| Length = 147 Score = 35.4 bits (80), Expect(2) = 0.007 Identities = 17/27 (62%), Positives = 22/27 (81%), Gaps = 1/27 (3%) Frame = -2 Query: 263 VLIAGFGR-KGHAVGDIPGVRFKVVKV 186 V+I G G KG ++GDIPG+R+KVVKV Sbjct: 103 VIIEGIGGPKGGSMGDIPGIRYKVVKV 129 Score = 21.6 bits (44), Expect(2) = 0.007 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = -3 Query: 178 VSLLALFKEKKEKPR 134 VSL L K +KEKPR Sbjct: 132 VSLKELVKGRKEKPR 146
>RS12_SULTO (Q976A8) 30S ribosomal protein S12P| Length = 147 Score = 32.3 bits (72), Expect(2) = 0.007 Identities = 15/27 (55%), Positives = 21/27 (77%), Gaps = 1/27 (3%) Frame = -2 Query: 263 VLIAGFGRK-GHAVGDIPGVRFKVVKV 186 V+IAG G G ++GD+PGVR+KV+ V Sbjct: 103 VVIAGIGGTLGRSMGDLPGVRYKVIMV 129 Score = 24.6 bits (52), Expect(2) = 0.007 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = -3 Query: 181 GVSLLALFKEKKEKP 137 GVSL AL+K KK+KP Sbjct: 131 GVSLDALYKGKKQKP 145
>RS12_AERPE (Q9YAU5) 30S ribosomal protein S12P| Length = 147 Score = 32.0 bits (71), Expect(2) = 0.007 Identities = 15/27 (55%), Positives = 21/27 (77%), Gaps = 1/27 (3%) Frame = -2 Query: 263 VLIAGFGR-KGHAVGDIPGVRFKVVKV 186 V+I G G +G ++GDIPGVR++VV V Sbjct: 103 VIIEGIGGPRGRSMGDIPGVRYRVVMV 129 Score = 25.0 bits (53), Expect(2) = 0.007 Identities = 11/16 (68%), Positives = 14/16 (87%) Frame = -3 Query: 181 GVSLLALFKEKKEKPR 134 GVSL AL++ KK+KPR Sbjct: 131 GVSLKALWEGKKQKPR 146
>RS12_SULSO (P39573) 30S ribosomal protein S12P| Length = 147 Score = 31.2 bits (69), Expect(2) = 0.016 Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 1/27 (3%) Frame = -2 Query: 263 VLIAGFGRK-GHAVGDIPGVRFKVVKV 186 V+I G G G ++GD+PGVR+KV+ V Sbjct: 103 VIITGIGGTLGRSMGDLPGVRYKVIMV 129 Score = 24.6 bits (52), Expect(2) = 0.016 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = -3 Query: 181 GVSLLALFKEKKEKP 137 GVSL AL+K KK+KP Sbjct: 131 GVSLDALYKGKKQKP 145
>RS12_METKA (Q8TXJ2) 30S ribosomal protein S12P| Length = 147 Score = 36.2 bits (82), Expect = 0.023 Identities = 19/27 (70%), Positives = 21/27 (77%), Gaps = 1/27 (3%) Frame = -2 Query: 263 VLIAGFGR-KGHAVGDIPGVRFKVVKV 186 V+I G G KG A GDIPGVR+KVVKV Sbjct: 103 VVIEGIGGPKGRAKGDIPGVRYKVVKV 129
>RS12_ARCFU (O28387) 30S ribosomal protein S12P| Length = 142 Score = 35.8 bits (81), Expect = 0.030 Identities = 15/20 (75%), Positives = 18/20 (90%) Frame = -2 Query: 245 GRKGHAVGDIPGVRFKVVKV 186 GR G ++GDIPGVR+KVVKV Sbjct: 105 GRMGRSMGDIPGVRYKVVKV 124
>RS12_PICTO (Q6L0R4) 30S ribosomal protein S12P| Length = 142 Score = 34.7 bits (78), Expect = 0.066 Identities = 16/27 (59%), Positives = 21/27 (77%), Gaps = 1/27 (3%) Frame = -2 Query: 263 VLIAGFG-RKGHAVGDIPGVRFKVVKV 186 V++ G G R G + GDIPGVR+KV+KV Sbjct: 98 VVVEGIGGRMGRSKGDIPGVRYKVIKV 124
>RS12_METMA (Q8PUR5) 30S ribosomal protein S12P| Length = 142 Score = 34.7 bits (78), Expect = 0.066 Identities = 15/20 (75%), Positives = 17/20 (85%) Frame = -2 Query: 245 GRKGHAVGDIPGVRFKVVKV 186 GR G A+GDIPGVRFKV+ V Sbjct: 105 GRMGGAMGDIPGVRFKVIAV 124
>RS12_METAC (Q8TRC1) 30S ribosomal protein S12P| Length = 142 Score = 34.7 bits (78), Expect = 0.066 Identities = 15/20 (75%), Positives = 17/20 (85%) Frame = -2 Query: 245 GRKGHAVGDIPGVRFKVVKV 186 GR G A+GDIPGVRFKV+ V Sbjct: 105 GRMGGAMGDIPGVRFKVIAV 124
>RS12_THEVO (Q97CD8) 30S ribosomal protein S12P| Length = 142 Score = 32.3 bits (72), Expect = 0.33 Identities = 14/20 (70%), Positives = 16/20 (80%) Frame = -2 Query: 245 GRKGHAVGDIPGVRFKVVKV 186 GR G + GDIPGVR+KVV V Sbjct: 105 GRMGRSKGDIPGVRYKVVAV 124
>RS12_THEAC (Q9HLY2) 30S ribosomal protein S12P| Length = 142 Score = 32.3 bits (72), Expect = 0.33 Identities = 14/20 (70%), Positives = 16/20 (80%) Frame = -2 Query: 245 GRKGHAVGDIPGVRFKVVKV 186 GR G + GDIPGVR+KVV V Sbjct: 105 GRMGRSKGDIPGVRYKVVAV 124
>RS12_METBF (Q464Z1) 30S ribosomal protein S12P| Length = 142 Score = 32.3 bits (72), Expect = 0.33 Identities = 14/20 (70%), Positives = 16/20 (80%) Frame = -2 Query: 245 GRKGHAVGDIPGVRFKVVKV 186 GR G A+GDIPGVRF+V V Sbjct: 105 GRMGGAMGDIPGVRFRVTAV 124
>RS12_METTH (O27129) 30S ribosomal protein S12P| Length = 141 Score = 31.6 bits (70), Expect = 0.56 Identities = 15/27 (55%), Positives = 20/27 (74%), Gaps = 1/27 (3%) Frame = -2 Query: 263 VLIAGFGR-KGHAVGDIPGVRFKVVKV 186 V++ G G G ++GDIPGVR+KV KV Sbjct: 97 VVVEGIGGPSGRSMGDIPGVRWKVTKV 123
>RS12_METMP (Q6LXI4) 30S ribosomal protein S12P| Length = 147 Score = 31.6 bits (70), Expect = 0.56 Identities = 17/27 (62%), Positives = 19/27 (70%), Gaps = 1/27 (3%) Frame = -2 Query: 263 VLIAGFGR-KGHAVGDIPGVRFKVVKV 186 V+I G G G A GDIPGVR+KVV V Sbjct: 103 VVIEGIGGPSGQAKGDIPGVRYKVVLV 129
>RS12_METVA (P14040) 30S ribosomal protein S12P| Length = 147 Score = 30.8 bits (68), Expect = 0.95 Identities = 16/27 (59%), Positives = 19/27 (70%), Gaps = 1/27 (3%) Frame = -2 Query: 263 VLIAGFGR-KGHAVGDIPGVRFKVVKV 186 V+I G G G A GDIPGVR+KV+ V Sbjct: 103 VVIEGIGGPSGQAKGDIPGVRYKVLMV 129
>PCD15_HUMAN (Q96QU1) Protocadherin-15 precursor| Length = 1955 Score = 30.8 bits (68), Expect = 0.95 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = +1 Query: 172 ETHQHTLTTLNRTPGISPTACPLRPNPAIN 261 ET ++ P ISP+ACPL P P I+ Sbjct: 1725 ETERNIFENFAHPPNISPSACPLPPPPPIS 1754
>RS12_NATPD (Q3IUM8) 30S ribosomal protein S12P| Length = 142 Score = 30.8 bits (68), Expect = 0.95 Identities = 16/27 (59%), Positives = 19/27 (70%), Gaps = 1/27 (3%) Frame = -2 Query: 263 VLIAGFG-RKGHAVGDIPGVRFKVVKV 186 V IAG G KG A+GD+ GV +KV KV Sbjct: 98 VTIAGIGGAKGRAMGDLSGVNYKVEKV 124
>RS12_HALSA (P15756) 30S ribosomal protein S12P (HmaS12)| Length = 142 Score = 30.8 bits (68), Expect = 0.95 Identities = 16/27 (59%), Positives = 19/27 (70%), Gaps = 1/27 (3%) Frame = -2 Query: 263 VLIAGFG-RKGHAVGDIPGVRFKVVKV 186 V IAG G KG A+GD+ GV +KV KV Sbjct: 98 VTIAGIGGAKGRAMGDLSGVNYKVEKV 124
>RS12_HALMA (Q5UZR8) 30S ribosomal protein S12P| Length = 142 Score = 30.8 bits (68), Expect = 0.95 Identities = 16/27 (59%), Positives = 19/27 (70%), Gaps = 1/27 (3%) Frame = -2 Query: 263 VLIAGFG-RKGHAVGDIPGVRFKVVKV 186 V IAG G KG A+GD+ GV +KV KV Sbjct: 98 VTIAGIGGAKGRAMGDLSGVNYKVEKV 124
>XSP1_ARATH (Q9LLL8) Xylem serine proteinase 1 precursor (EC 3.4.21.-) (AtXSP1)| (Cucumisin-like protein) Length = 749 Score = 28.5 bits (62), Expect = 4.7 Identities = 11/24 (45%), Positives = 13/24 (54%) Frame = -2 Query: 236 GHAVGDIPGVRFKVVKVCWCVSAC 165 G A G +P R + KVCW S C Sbjct: 234 GTARGAVPSARLAMYKVCWARSGC 257
>RS12_HALMO (P15355) 30S ribosomal protein S12P| Length = 142 Score = 28.5 bits (62), Expect = 4.7 Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 1/27 (3%) Frame = -2 Query: 263 VLIAGFG-RKGHAVGDIPGVRFKVVKV 186 V IAG G KG A+GD+ V +KV KV Sbjct: 98 VTIAGIGGAKGRAMGDLSAVNYKVEKV 124
>RS12_METJA (P54062) 30S ribosomal protein S12P| Length = 148 Score = 28.1 bits (61), Expect = 6.2 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 2/28 (7%) Frame = -2 Query: 263 VLIAGFGR-KG-HAVGDIPGVRFKVVKV 186 V+I G G KG A GDIPGV++KV+ V Sbjct: 103 VIIEGIGGPKGPRAKGDIPGVKYKVIMV 130
>CYAA_NEUCR (Q01631) Adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase)| (Adenylyl cyclase) Length = 2300 Score = 28.1 bits (61), Expect = 6.2 Identities = 18/55 (32%), Positives = 24/55 (43%) Frame = +1 Query: 91 LHACHQPRCSQQSKTWVSPSSP*RGQAETHQHTLTTLNRTPGISPTACPLRPNPA 255 L +C QP+ S S+ SPS Q T Q ++ T G T P P+ A Sbjct: 114 LQSCSQPQLSLNSQQSQSPSQYHSQQTPTQQQPQQQVSPTGGSRLTQSPTTPSNA 168 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,761,529 Number of Sequences: 219361 Number of extensions: 585288 Number of successful extensions: 2425 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 2344 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2425 length of database: 80,573,946 effective HSP length: 63 effective length of database: 66,754,203 effective search space used: 1602100872 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)