ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal18p24 |
|---|---|
| Clone Library Name | barley_pub |
>RL21_ARATH (Q43291) 60S ribosomal protein L21| Length = 164 Score = 246 bits (628), Expect = 3e-65 Identities = 114/130 (87%), Positives = 123/130 (94%) Frame = -3 Query: 550 KVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVE 371 KVG+YVDVKVNGA+HKGMPHKFYHGRTGR+WNVTKRA+GVE+NKQ+GNRIIRKRIHVRVE Sbjct: 35 KVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVE 94 Query: 370 HVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIPY 191 HVQ SRCAEEF+LRK KND+LKA AKA GE ISTKRQP GPKPGFMVEG T+ETVTPIPY Sbjct: 95 HVQQSRCAEEFKLRKKKNDELKAAAKANGETISTKRQPKGPKPGFMVEGMTLETVTPIPY 154 Query: 190 DVVNDLKGGY 161 DVVNDLKGGY Sbjct: 155 DVVNDLKGGY 164
>RL21_CYAPA (O82574) 60S ribosomal protein L21| Length = 161 Score = 140 bits (352), Expect = 3e-33 Identities = 73/124 (58%), Positives = 92/124 (74%), Gaps = 3/124 (2%) Frame = -3 Query: 550 KVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVE 371 K+GEYVDV N AVHKGMP K+YHGRTG VWNVTKRAIGVEINK+V +RII+KRIHVR++ Sbjct: 35 KIGEYVDVVGNAAVHKGMPFKYYHGRTGIVWNVTKRAIGVEINKRVRHRIIKKRIHVRID 94 Query: 370 HVQPSRCAEEFRLRKVKNDQLKAEAK-ARGEVISTKRQPLGPKPGFMV--EGTTIETVTP 200 HV+ S C + F R +ND++K +A A+ V STKR P+ PK G ++ +G ET Sbjct: 95 HVKKSSCRDSFLKRVKENDKIKHDAHVAKLPVPSTKRLPVLPKAGAIIKSKGQVPETCHA 154 Query: 199 IPYD 188 IPY+ Sbjct: 155 IPYE 158
>RL21B_YEAST (Q12672) 60S ribosomal protein L21-B| Length = 160 Score = 134 bits (338), Expect = 1e-31 Identities = 63/123 (51%), Positives = 88/123 (71%), Gaps = 2/123 (1%) Frame = -3 Query: 550 KVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVE 371 KVG+ VD+K NG++ KGMPHKFY G+TG V+NVTK ++GV INK VGNR + KR+++RVE Sbjct: 35 KVGDIVDIKANGSIQKGMPHKFYQGKTGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVE 94 Query: 370 HVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMV--EGTTIETVTPI 197 H++ S+C +EF R N +AEAKA+G + KRQP P+ +V EG +T+ P+ Sbjct: 95 HIKHSKCRQEFLERVKANAAKRAEAKAQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPV 154 Query: 196 PYD 188 PY+ Sbjct: 155 PYE 157
>RL21A_YEAST (Q02753) 60S ribosomal protein L21-A| Length = 160 Score = 134 bits (338), Expect = 1e-31 Identities = 63/123 (51%), Positives = 88/123 (71%), Gaps = 2/123 (1%) Frame = -3 Query: 550 KVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVE 371 KVG+ VD+K NG++ KGMPHKFY G+TG V+NVTK ++GV INK VGNR + KR+++RVE Sbjct: 35 KVGDIVDIKANGSIQKGMPHKFYQGKTGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVE 94 Query: 370 HVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMV--EGTTIETVTPI 197 H++ S+C +EF R N +AEAKA+G + KRQP P+ +V EG +T+ P+ Sbjct: 95 HIKHSKCRQEFLERVKANAAKRAEAKAQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPV 154 Query: 196 PYD 188 PY+ Sbjct: 155 PYE 157
>RL21B_SCHPO (O42706) 60S ribosomal protein L21-B| Length = 160 Score = 127 bits (320), Expect = 2e-29 Identities = 62/123 (50%), Positives = 85/123 (69%), Gaps = 2/123 (1%) Frame = -3 Query: 550 KVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVE 371 KVG+ VD+KVNGAV KGMPHK+YHG+TG V+NVT+ ++GV I K VGNR + KR++VR+E Sbjct: 35 KVGDIVDIKVNGAVQKGMPHKYYHGKTGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIE 94 Query: 370 HVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVT--PI 197 HV+ S+C ++F R N+ + EAKA+G+ + +RQP P V E VT P+ Sbjct: 95 HVKHSKCRQDFLDRVKANEAKRKEAKAQGKTVQLRRQPAPPATAHFVSTENNEPVTLHPV 154 Query: 196 PYD 188 YD Sbjct: 155 AYD 157
>RL21A_SCHPO (Q9UUC1) 60S ribosomal protein L21-A| Length = 160 Score = 127 bits (320), Expect = 2e-29 Identities = 62/123 (50%), Positives = 85/123 (69%), Gaps = 2/123 (1%) Frame = -3 Query: 550 KVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVE 371 KVG+ VD+KVNGAV KGMPHK+YHG+TG V+NVT+ ++GV I K VGNR + KR++VR+E Sbjct: 35 KVGDIVDIKVNGAVQKGMPHKYYHGKTGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIE 94 Query: 370 HVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVT--PI 197 HV+ S+C ++F R N+ + EAKA+G+ + +RQP P V E VT P+ Sbjct: 95 HVKHSKCRQDFLDRVKANEAKRKEAKAQGKTVQLRRQPAPPAKAHFVSTENNEPVTLHPV 154 Query: 196 PYD 188 YD Sbjct: 155 AYD 157
>RL21_HUMAN (P46778) 60S ribosomal protein L21| Length = 159 Score = 123 bits (309), Expect = 3e-28 Identities = 60/123 (48%), Positives = 82/123 (66%), Gaps = 2/123 (1%) Frame = -3 Query: 550 KVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVE 371 K G+ VD+K G V KGMPHK YHG+TGRV+NVT+ A+G+ +NKQV +I+ KRI+VR+E Sbjct: 34 KKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIE 93 Query: 370 HVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMV--EGTTIETVTPI 197 H++ S+ + F R +NDQ K EAK +G + KRQP P+ V G E + PI Sbjct: 94 HIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPI 153 Query: 196 PYD 188 PY+ Sbjct: 154 PYE 156
>RL21_CHILA (Q6QN05) 60S ribosomal protein L21| Length = 159 Score = 123 bits (309), Expect = 3e-28 Identities = 60/123 (48%), Positives = 82/123 (66%), Gaps = 2/123 (1%) Frame = -3 Query: 550 KVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVE 371 K G+ VD+K G V KGMPHK YHG+TGRV+NVT+ A+G+ +NKQV +I+ KRI+VR+E Sbjct: 34 KKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIE 93 Query: 370 HVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMV--EGTTIETVTPI 197 H++ S+ + F R +NDQ K EAK +G + KRQP P+ V G E + PI Sbjct: 94 HIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPI 153 Query: 196 PYD 188 PY+ Sbjct: 154 PYE 156
>RL21_RAT (P20280) 60S ribosomal protein L21| Length = 159 Score = 118 bits (296), Expect = 1e-26 Identities = 58/123 (47%), Positives = 80/123 (65%), Gaps = 2/123 (1%) Frame = -3 Query: 550 KVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVE 371 K G+ VD+K G V KGMPHK YHG+TGRV+NVT+ A+G+ +NKQV +I+ KRI+VR+E Sbjct: 34 KKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIE 93 Query: 370 HVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMV--EGTTIETVTPI 197 H++ S+ + F R +NDQ K EAK +G + QP P+ V G E + PI Sbjct: 94 HIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLNGQPAPPREAHFVRTNGKEPELLEPI 153 Query: 196 PYD 188 PY+ Sbjct: 154 PYE 156
>RL21_MOUSE (O09167) 60S ribosomal protein L21| Length = 159 Score = 118 bits (295), Expect = 1e-26 Identities = 58/123 (47%), Positives = 80/123 (65%), Gaps = 2/123 (1%) Frame = -3 Query: 550 KVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVE 371 K G+ VD+K G V KGMPHK YHG+TGRV+NVT+ A+G+ +NKQV +I+ KRI+VR+E Sbjct: 34 KKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIE 93 Query: 370 HVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMV--EGTTIETVTPI 197 H++ S+ + F R +NDQ K EAK +G + KR P+ V G E + PI Sbjct: 94 HIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRHAAPPREAHFVRTNGKEPELLEPI 153 Query: 196 PYD 188 PY+ Sbjct: 154 PYE 156
>RL21_CAEEL (P34334) 60S ribosomal protein L21| Length = 160 Score = 112 bits (281), Expect = 5e-25 Identities = 54/126 (42%), Positives = 84/126 (66%), Gaps = 3/126 (2%) Frame = -3 Query: 550 KVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVE 371 K G+ VD+K NGA KGMP K YHGRTGR++NVT+ A+G+ +NK+V I+ KRI++R+E Sbjct: 34 KRGDLVDIKTNGAFQKGMPFKAYHGRTGRIFNVTRGAVGIIVNKRVRGNILPKRINIRIE 93 Query: 370 HVQPSRCAEEFRLRKVKNDQLKAEAKARGE-VISTKRQPLGPKPGFMV--EGTTIETVTP 200 H++PS+C +F R ND+ + AK+ G+ V + KR P+ P+ V + E + P Sbjct: 94 HIKPSKCRTDFLNRVKSNDEKRKAAKSAGQPVPALKRLPVAPRGAHTVTTQNNEPELLAP 153 Query: 199 IPYDVV 182 + +++V Sbjct: 154 LRFEIV 159
>RL21_PYUST (P49667) 60S ribosomal protein L21 (Fragment)| Length = 155 Score = 111 bits (277), Expect = 2e-24 Identities = 55/122 (45%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Frame = -3 Query: 550 KVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVE 371 K G+ VD+K +G+V K PHK YHG+TGR++NVT+ A+G+ +NKQV RII KRI+VR+E Sbjct: 33 KKGDIVDIKGDGSVQKVCPHKVYHGKTGRIFNVTQHAVGIIVNKQVRGRIIAKRINVRIE 92 Query: 370 HVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTT-IETVTPIP 194 H++ S+ F R +N++ + EA+ + ++ KRQP P+ G V + E V PIP Sbjct: 93 HIKHSKSRISFIQRVHENERKRKEAREKKIRVNLKRQPQQPRTGHFVRSSAEPELVEPIP 152 Query: 193 YD 188 Y+ Sbjct: 153 YE 154
>RL21_ENTHI (P38653) 60S ribosomal protein L21| Length = 166 Score = 109 bits (272), Expect = 6e-24 Identities = 55/130 (42%), Positives = 82/130 (63%), Gaps = 9/130 (6%) Frame = -3 Query: 550 KVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVE 371 KVG+YV + N ++ G+P+K +HG+TGRVWNV AIGV +NK+V NRI+ KR+H+ E Sbjct: 35 KVGDYVTILCNSSIQHGLPYKAFHGKTGRVWNVNPHAIGVMVNKKVNNRIVVKRLHISPE 94 Query: 370 HVQPSRCAEEFRLRKV-------KNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIE 212 H++PS C ++F RK +N QLK E K + KR P P+P +++G I+ Sbjct: 95 HIRPSGCQKDFLERKAAVAAIRKQNIQLKKEGKPL-LPLPAKRLPKQPRPAELIKGADIK 153 Query: 211 --TVTPIPYD 188 TV P+ ++ Sbjct: 154 FTTVAPLKFE 163
>RL21_ENCCU (Q8SRW8) 60S ribosomal protein L21| Length = 160 Score = 96.7 bits (239), Expect = 4e-20 Identities = 46/103 (44%), Positives = 76/103 (73%), Gaps = 1/103 (0%) Frame = -3 Query: 550 KVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVE 371 ++G+ VD+ VN A+ KGMPHK+YHGRTGRV++V R++ V + K+V + + K+I VR+E Sbjct: 34 EIGDMVDILVNPAMMKGMPHKYYHGRTGRVYDVKPRSLNVALYKRVRGKYVIKKIIVRIE 93 Query: 370 HVQPSRCAEEFRLRKVKNDQLKAEAKARGEVIS-TKRQPLGPK 245 HV+ SRC+EE + R + ++ +A++RG V++ +KR+ GP+ Sbjct: 94 HVRKSRCSEESQKRILMAAEMARDAESRGVVLAPSKRKIEGPR 136
>RL21_SULAC (Q4JB11) 50S ribosomal protein L21e| Length = 103 Score = 55.1 bits (131), Expect = 1e-07 Identities = 28/62 (45%), Positives = 40/62 (64%) Frame = -3 Query: 544 GEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHV 365 GEYV VK+N ++HKGMPH+ YHG+ G V V KR E+ +G++ + + VR EH+ Sbjct: 39 GEYVVVKINPSIHKGMPHRRYHGKVGLV--VGKRGKAYEVKVNIGDK--ERVLIVRPEHL 94 Query: 364 QP 359 P Sbjct: 95 IP 96
>RL21_SULTO (Q975F2) 50S ribosomal protein L21e| Length = 103 Score = 48.9 bits (115), Expect = 9e-06 Identities = 26/62 (41%), Positives = 38/62 (61%) Frame = -3 Query: 550 KVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVE 371 K G+YV +K+N +VHKGMPH+ YHG+ G + KR + +G++ K I VR E Sbjct: 37 KEGDYVVIKINPSVHKGMPHRRYHGKVGVIQG--KRGKAYIVRVTLGDK--EKVIIVRPE 92 Query: 370 HV 365 H+ Sbjct: 93 HL 94
>RL21_SULSO (Q9UXE0) 50S ribosomal protein L21e| Length = 101 Score = 46.6 bits (109), Expect = 5e-05 Identities = 25/64 (39%), Positives = 40/64 (62%) Frame = -3 Query: 550 KVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVE 371 K G+ V VK+N +VH+GMPH+ Y G+ G++ + KR ++ +G++ K I VR E Sbjct: 37 KEGDNVVVKINPSVHQGMPHRRYQGKVGKI--IGKRGRAYLVSVTLGDK--EKVIIVRPE 92 Query: 370 HVQP 359 H+ P Sbjct: 93 HLVP 96
>RL21_METJA (P54013) 50S ribosomal protein L21e| Length = 98 Score = 46.6 bits (109), Expect = 5e-05 Identities = 26/65 (40%), Positives = 39/65 (60%) Frame = -3 Query: 550 KVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVE 371 K GEYV + ++ +VHKGMPH +HGRTG V RA V++ G + K+I + Sbjct: 36 KEGEYVHIVIDPSVHKGMPHPRFHGRTGIVVGKQGRAFIVKVRD--GGKY--KQIIAYPQ 91 Query: 370 HVQPS 356 H++P+ Sbjct: 92 HLRPA 96
>RL21_METKA (Q8TUU3) 50S ribosomal protein L21e| Length = 102 Score = 45.8 bits (107), Expect = 8e-05 Identities = 27/67 (40%), Positives = 38/67 (56%) Frame = -3 Query: 544 GEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHV 365 G+ V + ++ +VHKGMPH YHGRTG V RA V+I G + K++ V EH+ Sbjct: 38 GQKVHIVIDPSVHKGMPHPRYHGRTGEVVGRQGRAYIVKIRD--GGK--EKKLIVYPEHL 93 Query: 364 QPSRCAE 344 +P E Sbjct: 94 KPQEQPE 100
>RL21_PIG (P49666) 60S ribosomal protein L21 (Fragment)| Length = 61 Score = 42.4 bits (98), Expect = 9e-04 Identities = 17/28 (60%), Positives = 21/28 (75%) Frame = -3 Query: 550 KVGEYVDVKVNGAVHKGMPHKFYHGRTG 467 K G+ VD+K G V KG+PHK YHG+TG Sbjct: 34 KKGDIVDIKGMGTVQKGLPHKCYHGKTG 61
>RL21_METTH (O27378) 50S ribosomal protein L21e| Length = 96 Score = 42.0 bits (97), Expect = 0.001 Identities = 21/61 (34%), Positives = 38/61 (62%) Frame = -3 Query: 544 GEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHV 365 G+ V + ++ ++H+G PH +HG+TGRV + ++ V + GN+ K++ VR EH+ Sbjct: 37 GDLVHIIIDPSIHRGQPHPRFHGKTGRVVGMMGKSYVVALKD--GNK--DKQLVVRPEHL 92 Query: 364 Q 362 Q Sbjct: 93 Q 93
>RL21_PYRHO (O74001) 50S ribosomal protein L21e| Length = 97 Score = 40.8 bits (94), Expect = 0.003 Identities = 22/66 (33%), Positives = 36/66 (54%) Frame = -3 Query: 550 KVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVE 371 +VG+ V + + + HKGMP +HGRTG V V KR + GN++ K + + Sbjct: 36 EVGQKVHIVIEPSYHKGMPDPRFHGRTGTV--VGKRGDAYIVEVPDGNKV--KTLFIHPV 91 Query: 370 HVQPSR 353 H++P + Sbjct: 92 HLRPQK 97
>RL21_PYRAB (Q9UZP1) 50S ribosomal protein L21e| Length = 97 Score = 40.8 bits (94), Expect = 0.003 Identities = 22/66 (33%), Positives = 36/66 (54%) Frame = -3 Query: 550 KVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVE 371 +VG+ V + + + HKGMP +HGRTG V V KR + GN++ K + + Sbjct: 36 EVGQRVHIVIEPSYHKGMPDPRFHGRTGTV--VGKRGDAYIVEVPDGNKV--KTLFIHPV 91 Query: 370 HVQPSR 353 H++P + Sbjct: 92 HLRPQK 97
>RL21_PYRFU (Q8U217) 50S ribosomal protein L21e| Length = 97 Score = 39.3 bits (90), Expect = 0.007 Identities = 21/66 (31%), Positives = 37/66 (56%) Frame = -3 Query: 550 KVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVE 371 +VG+ V + + + HKGMP +HGRTG V V KR + + G+++ K + + Sbjct: 36 EVGQRVHIVIEPSYHKGMPDPRFHGRTGTV--VGKRGEAYIVEIKDGSKV--KTLFIHPV 91 Query: 370 HVQPSR 353 H++P + Sbjct: 92 HLRPQK 97
>RL21_ARCFU (O28743) 50S ribosomal protein L21e| Length = 97 Score = 39.3 bits (90), Expect = 0.007 Identities = 24/63 (38%), Positives = 35/63 (55%) Frame = -3 Query: 547 VGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEH 368 VG+ V + + A KGMPH + GRTG V RA V++ G ++ K + VR EH Sbjct: 36 VGQRVHIDIEPASQKGMPHPRFQGRTGVVIGQRGRAYLVQVRD--GGKM--KTLIVRPEH 91 Query: 367 VQP 359 ++P Sbjct: 92 LKP 94
>RL21_AERPE (P58077) 50S ribosomal protein L21e| Length = 107 Score = 38.1 bits (87), Expect = 0.017 Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 1/73 (1%) Frame = -3 Query: 550 KVGEYVDVKVNGAVHK-GMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRV 374 +VG+ V + +N + GMPH+ +HG TG V V KR E+ +G + RK + V Sbjct: 37 RVGDKVAIIINPSFPDWGMPHRRFHGLTGTV--VGKRGEAYEVEVYLGRK--RKTLFVPP 92 Query: 373 EHVQPSRCAEEFR 335 H++P A E R Sbjct: 93 VHLKPLSTAAERR 105
>RL21_PYRKO (Q5JI51) 50S ribosomal protein L21e| Length = 98 Score = 37.4 bits (85), Expect = 0.028 Identities = 21/66 (31%), Positives = 34/66 (51%) Frame = -3 Query: 550 KVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVE 371 +VG+ V + + + HKGMP +HGRTG V V KR + G ++ K + Sbjct: 36 EVGQKVHIVIEPSYHKGMPDPRFHGRTGTV--VGKRGDAYIVQITDGGKV--KTFFIHPV 91 Query: 370 HVQPSR 353 H++P + Sbjct: 92 HLRPQK 97
>RL21_METMP (Q6M125) 50S ribosomal protein L21e| Length = 97 Score = 36.6 bits (83), Expect = 0.049 Identities = 22/64 (34%), Positives = 36/64 (56%) Frame = -3 Query: 544 GEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHV 365 G+ V V ++ +V KGMPH +HG+TG V V +R + + G + K I R +H+ Sbjct: 37 GDLVHVVLDPSVQKGMPHPKFHGKTGVV--VAQRGSSFLVRVKDGGKY--KDIIARPQHL 92 Query: 364 QPSR 353 + S+ Sbjct: 93 RESK 96
>RL21_METAC (Q8TQU3) 50S ribosomal protein L21e| Length = 97 Score = 33.5 bits (75), Expect = 0.41 Identities = 18/64 (28%), Positives = 35/64 (54%) Frame = -3 Query: 544 GEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHV 365 G+ V + ++ +V KGMP+ + G TG+V R+ +E+ GN + K + +H+ Sbjct: 37 GQMVHIDIDPSVQKGMPNPKFQGSTGKVIGQRGRSYVLEVRS--GNAM--KEVFSLPQHL 92 Query: 364 QPSR 353 +P + Sbjct: 93 KPQK 96
>ZN691_MOUSE (Q3TDE8) Zinc finger protein 691| Length = 283 Score = 31.2 bits (69), Expect = 2.0 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = -3 Query: 409 NRIIRKRIHVRVEHVQPSRCAEEFRLR 329 NRI +RIH+ +H Q ++C E FR R Sbjct: 125 NRIRHERIHLEEKHYQCAKCQESFRRR 151
>RL21_PYRAE (Q8ZTB5) 50S ribosomal protein L21e| Length = 100 Score = 30.4 bits (67), Expect = 3.5 Identities = 19/64 (29%), Positives = 33/64 (51%) Frame = -3 Query: 550 KVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVE 371 KVG+ V + ++ PH+ Y G+ G V + RA +E +G++ +K I E Sbjct: 36 KVGDKVIIDIDSTFISTAPHRRYQGKVGTVVGIRGRAYVIE--TFLGDK--KKIIITTPE 91 Query: 370 HVQP 359 H++P Sbjct: 92 HLKP 95
>RL21_PICTO (Q6L228) 50S ribosomal protein L21e| Length = 97 Score = 30.0 bits (66), Expect = 4.5 Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 3/61 (4%) Frame = -3 Query: 550 KVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGN---RIIRKRIHV 380 +VG+ + +N AV GMPH + G TG + + + ++ +VGN ++I +H+ Sbjct: 36 EVGDRAAIVINSAVPDGMPHHDFQGITGVITGM--QGSCYILSFKVGNVEKKVIAAPVHL 93 Query: 379 R 377 R Sbjct: 94 R 94
>RL21_METMA (Q8PU21) 50S ribosomal protein L21e| Length = 97 Score = 30.0 bits (66), Expect = 4.5 Identities = 17/64 (26%), Positives = 35/64 (54%) Frame = -3 Query: 544 GEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHV 365 G+ V + ++ +V KGMP+ + G TG+V + +R + + GN + K + +H+ Sbjct: 37 GQMVHIDIDPSVQKGMPNPKFQGFTGKV--IGQRGRSYILAVREGNSM--KEVFSVPQHL 92 Query: 364 QPSR 353 +P + Sbjct: 93 KPQK 96
>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor| Length = 374 Score = 30.0 bits (66), Expect = 4.5 Identities = 28/124 (22%), Positives = 46/124 (37%) Frame = -1 Query: 492 TSSTTAAPDACGXXXXXXXXXXXXXRLETASSGKGSMSVLSMCSHPGVLRSSA*GK*RMT 313 +++TT +P + ++SS S S S S SS Sbjct: 148 STTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------- 199 Query: 312 SSRRKPRHVVRSSAPRGSHSALNPGSWSRVPQSRPSLPFLMMWSMISRVVTRVFGLSACT 133 SS V +S+ SHS+ + S S SRPS + +M S ++ + Sbjct: 200 SSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSFITTMSSSTFISTVTVTPSS 259 Query: 132 TSSN 121 +SS+ Sbjct: 260 SSSS 263
>KIF1C_HUMAN (O43896) Kinesin-like protein KIF1C| Length = 1103 Score = 30.0 bits (66), Expect = 4.5 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -1 Query: 270 PRGSHSALNPGSWSRVPQSRPSLPFLMMWSMISRVV 163 P GS +A R+P +RP P L W +SR++ Sbjct: 893 PEGSEAAEEAAPSDRMPSARPPSPPLSSWERVSRLM 928
>HN_PI3HU (P12563) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 29.6 bits (65), Expect = 5.9 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = -3 Query: 373 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 194 + V P R + ++ + D ++ T + L P PG + TT++ P Sbjct: 135 QEVPPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLTMPTTVDGCVRTP 194 Query: 193 YDVVNDLKGGY 161 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>HN_PI3HA (P12561) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 29.6 bits (65), Expect = 5.9 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = -3 Query: 373 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 194 + V P R + ++ + D ++ T + L P PG + TT++ P Sbjct: 135 QEVPPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLAMPTTVDGCVRTP 194 Query: 193 YDVVNDLKGGY 161 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>HN_PI3H4 (P08492) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 29.6 bits (65), Expect = 5.9 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = -3 Query: 373 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 194 + V P R + ++ + D ++ T + L P PG + TT++ P Sbjct: 135 QEVPPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLAMPTTVDGCVRTP 194 Query: 193 YDVVNDLKGGY 161 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>HN_PI3HW (P12565) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 29.3 bits (64), Expect = 7.8 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = -3 Query: 373 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 194 + V P R + ++ + D ++ T + L P PG + TT++ P Sbjct: 135 QEVLPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLAMPTTVDGCVRTP 194 Query: 193 YDVVNDLKGGY 161 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>OXA11_SCHPO (O14300) Inner membrane protein oxa1-1, mitochondrial precursor| (Cytochrome oxidase biogenesis protein 1-1) (Sp1) Length = 374 Score = 29.3 bits (64), Expect = 7.8 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +3 Query: 300 SALSWSFFTFLRRNSSAHLDGCTCSTRTWILFLMMRFPTCLL 425 SA+ +SFF +R+ S +DG T W L + P C+L Sbjct: 170 SAVFFSFFYAIRKMSRLSVDGFTTGGLAWFKDLSIPDPYCIL 211 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 79,101,452 Number of Sequences: 219361 Number of extensions: 1675242 Number of successful extensions: 4833 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 4645 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4833 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4488201198 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
