ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal7d16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK073442.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 2e-19
2dbj|AK062287.1| Oryza sativa (japonica cultivar-group) cDNA clon... 103 7e-19
3gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome... 94 7e-16
4emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 42 2.2
5gb|AC090579.6| Homo sapiens chromosome 8, clone RP11-649G15, com... 42 2.2
6gb|AE012070.1| Xanthomonas axonopodis pv. citri str. 306, secti... 42 2.2
7gb|AC023344.4|AC023344 Homo sapiens BAC clone RP11-395G23 from 8... 42 2.2
8gb|DQ020202.1| Homo sapiens oxidation resistance 1 (OXR1) gene, ... 42 2.2
9gb|AC117396.2| Homo sapiens 3 BAC RP11-89E16 (Roswell Park Cance... 42 2.2
10dbj|AP000856.3| Homo sapiens genomic DNA, chromosome 8q23, clone... 42 2.2
11dbj|AP004285.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 42 2.2
12gb|AC118700.10| Mus musculus chromosome 3, clone RP23-24O21, com... 40 8.8
13ref|XM_870006.1| PREDICTED: Bos taurus similar to monoacylglycer... 40 8.8
14gb|AC118755.7| Homo sapiens chromosome 17, clone RP11-55L4, comp... 40 8.8
15gb|AY259195.1| Uncultured soil bacterium HJALFZB03 nitrous oxide... 40 8.8
16emb|BX295538.1|NC45B12 Neurospora crassa DNA linkage group VI Co... 40 8.8
17emb|BX571955.15| Zebrafish DNA sequence from clone DKEY-27B3 in ... 40 8.8
18gb|AC103870.3| Homo sapiens chromosome 11, clone RP11-702L21, co... 40 8.8
19gb|AC156504.5| Mus musculus 10 BAC RP24-315I19 (Roswell Park Can... 40 8.8
20dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
21dbj|AP004646.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
22dbj|AP005440.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
23emb|CR925790.6| Zebrafish DNA sequence from clone DKEY-275J21 in... 40 8.8
24gb|AC154388.4| Mus musculus BAC clone RP23-14P7 from chromosome ... 40 8.8
25emb|CT030647.17| Mouse DNA sequence from clone RP23-379I9 on chr... 40 8.8
26dbj|AB047397.2| Zygosaccharomyces rouxii ZGCY2 mRNA for glycerol... 40 8.8
27dbj|AB047396.1| Zygosaccharomyces rouxii ZGCY1 gene for glycerol... 40 8.8

>dbj|AK073442.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044G18, full
           insert sequence
          Length = 1342

 Score =  105 bits (53), Expect = 2e-19
 Identities = 197/245 (80%)
 Strand = Plus / Minus

                                                                       
Query: 381 atccacatcaaccatcttgtctacataactgtaattagggtacatgctcttcatgattgc 440
           ||||||||||||||  ||| ||   || ||||| |||||||||||||||||||| |   |
Sbjct: 915 atccacatcaaccactttggctgtgtagctgtagttagggtacatgctcttcatcaaatc 856

                                                                       
Query: 441 cagcagatcctttaggtccatttgctccagtgagcatatgtatctctcagatggccctgc 500
           || || |||| | | ||||||||| ||  | || || ||||||| |||||||||||||||
Sbjct: 855 caacaaatccctcatgtccatttgttcttgagaacagatgtatcgctcagatggccctgc 796

                                                                       
Query: 501 cttgttgtacaacaggagcaacgcatcggcaacatcgcgaacgtctactatgggaaagaa 560
           ||||| |||||  || || || |||||||| |||||||| || || ||||||||||||||
Sbjct: 795 cttgtcgtacactagaagtaaagcatcggcgacatcgcggacatcgactatgggaaagaa 736

                                                                       
Query: 561 cttgttgttcatcgtgtcagggcctccttttatcatgtagacgaggaccttgctgctggt 620
            |||||| | |  |  |||||||||||||| || |||||||  || || |||||||||||
Sbjct: 735 tttgttgcttagtgcatcagggcctcctttcatgatgtagagcagaactttgctgctggt 676

                
Query: 621 attga 625
            ||||
Sbjct: 675 gttga 671



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 238  ggaagccggcatggttcgtcatct 261
            ||||||||||| ||||||||||||
Sbjct: 1055 ggaagccggcaaggttcgtcatct 1032



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 313 gtctcctcgatcttccttggtttccaccctagattcttcagctt 356
           ||||||||||  ||||| |||||||| || || |||||||||||
Sbjct: 989 gtctcctcgagtttcctaggtttccagcccagcttcttcagctt 946



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>dbj|AK062287.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-E03, full
            insert sequence
          Length = 1272

 Score =  103 bits (52), Expect = 7e-19
 Identities = 223/280 (79%)
 Strand = Plus / Minus

                                                                        
Query: 293  actcgatactatccgcgagtgtctcctcgatcttccttggtttccaccctagattcttca 352
            ||||||| || ||||| |||||||||||    |||||||| ||||| || ||||||||||
Sbjct: 1023 actcgatgctgtccgcaagtgtctcctcccgtttccttgggttccagcccagattcttca 964

                                                                        
Query: 353  gcttttccgaagtgactccaacgttgaaatccacatcaaccatcttgtctacataactgt 412
            | || || || || ||| | || ||| ||||||||||||||||||||||| ||||| |||
Sbjct: 963  gtttctctgatgtcacttcgaccttgtaatccacatcaaccatcttgtctgcataattgt 904

                                                                        
Query: 413  aattagggtacatgctcttcatgattgccagcagatcctttaggtccatttgctccagtg 472
            | |||||||||||| ||||||| |   |||  | ||  || |||||||| || || || |
Sbjct: 903  agttagggtacatgttcttcatcagatccaataaatgtttcaggtccatctgttctagag 844

                                                                        
Query: 473  agcatatgtatctctcagatggccctgccttgttgtacaacaggagcaacgcatcggcaa 532
             ||||| ||| | |||||||||||||||||||| |||    || || || ||||| ||||
Sbjct: 843  tgcataagtaccgctcagatggccctgccttgtggtatgctagaagtaaagcatcagcaa 784

                                                    
Query: 533  catcgcgaacgtctactatgggaaagaacttgttgttcat 572
            |||| || || ||||| |||||  |||| |||||||||||
Sbjct: 783  catcacggacatctaccatgggccagaatttgttgttcat 744



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>gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone
             OSJNBb0052C07, complete sequence
          Length = 154528

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 131/159 (82%)
 Strand = Plus / Minus

                                                                         
Query: 409   ctgtaattagggtacatgctcttcatgattgccagcagatcctttaggtccatttgctcc 468
             ||||| |||||||||||||||||||| |   ||| || |||| | | ||||||||| || 
Sbjct: 45367 ctgtagttagggtacatgctcttcatcaaatccaacaaatccctcatgtccatttgttct 45308

                                                                         
Query: 469   agtgagcatatgtatctctcagatggccctgccttgttgtacaacaggagcaacgcatcg 528
              | || || ||||||| |||||||||||||||||||| |||||  || || || ||||||
Sbjct: 45307 tgagaacagatgtatcgctcagatggccctgccttgtcgtacactagaagtaaagcatcg 45248

                                                    
Query: 529   gcaacatcgcgaacgtctactatgggaaagaacttgttg 567
             || |||||||| || || |||||||||||||| ||||||
Sbjct: 45247 gcgacatcgcggacatcgactatgggaaagaatttgttg 45209



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                         
Query: 478   atgtatctctcagatggccctgccttgttgtacaacaggagcaacgcatcggcaacatcg 537
             ||||||| |||||||||||||||||||| ||||| ||| || || |||||||| ||||||
Sbjct: 36893 atgtatcgctcagatggccctgccttgtcgtacaccagaagtaaagcatcggcgacatcg 36834

                                    
Query: 538   cgaacgtctactatgggaaagaa 560
             || || || ||||||||||||||
Sbjct: 36833 cggacatcgactatgggaaagaa 36811



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 87/103 (84%)
 Strand = Plus / Minus

                                                                         
Query: 396   cttgtctacataactgtaattagggtacatgctcttcatgattgccagcagatcctttag 455
             ||||||||||||| |||| |||||||||||| ||||||| |    || || |||||| ||
Sbjct: 24258 cttgtctacataattgtagttagggtacatggtcttcatcaaactcaacaaatccttcag 24199

                                                        
Query: 456   gtccatttgctccagtgagcatatgtatctctcagatggccct 498
             ||||||||| || |||| ||| ||||||| |||||||||||||
Sbjct: 24198 gtccatttgttctagtgcgcagatgtatcgctcagatggccct 24156



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 89/109 (81%)
 Strand = Plus / Minus

                                                                         
Query: 293   actcgatactatccgcgagtgtctcctcgatcttccttggtttccaccctagattcttca 352
             ||||||| || ||||| |||||||||||    |||||||| ||||| || ||||||||||
Sbjct: 19791 actcgatgctgtccgcaagtgtctcctcccgtttccttgggttccagcccagattcttca 19732

                                                              
Query: 353   gcttttccgaagtgactccaacgttgaaatccacatcaaccatcttgtc 401
             | || || || || ||| | || ||| ||||||||||||||||| ||||
Sbjct: 19731 gtttctctgatgtcacttcgaccttgtaatccacatcaaccatcctgtc 19683



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 84/103 (81%)
 Strand = Plus / Minus

                                                                         
Query: 293   actcgatactatccgcgagtgtctcctcgatcttccttggtttccaccctagattcttca 352
             ||||||| || ||||||| |||||||||    |||||||||||||| || ||||||||||
Sbjct: 24526 actcgatgctgtccgcgaatgtctcctcccgtttccttggtttccagcccagattcttca 24467

                                                        
Query: 353   gcttttccgaagtgactccaacgttgaaatccacatcaaccat 395
             | || ||||| || ||| |  | ||| |||||| |||||||||
Sbjct: 24466 gtttctccgatgtcacttcggccttgtaatccaaatcaaccat 24424



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 139/177 (78%)
 Strand = Plus / Minus

                                                                         
Query: 396   cttgtctacataactgtaattagggtacatgctcttcatgattgccagcagatcctttag 455
             ||||||| ||||| |||| |||||||||||| ||||||| |   |||  | ||  || ||
Sbjct: 19545 cttgtctgcataattgtagttagggtacatgttcttcatcagatccaataaatgtttcag 19486

                                                                         
Query: 456   gtccatttgctccagtgagcatatgtatctctcagatggccctgccttgttgtacaacag 515
             |||||| || || || | ||||| ||| | |||||||||||||||||||| |||    ||
Sbjct: 19485 gtccatctgttctagagtgcataagtaccgctcagatggccctgccttgtggtatgctag 19426

                                                                      
Query: 516   gagcaacgcatcggcaacatcgcgaacgtctactatgggaaagaacttgttgttcat 572
              || || ||||| |||||||| || || ||||| |||||  |||| |||||||||||
Sbjct: 19425 aagtaaagcatcagcaacatcacggacatctaccatgggccagaatttgttgttcat 19369



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 74/91 (81%)
 Strand = Plus / Minus

                                                                         
Query: 415   ttagggtacatgctcttcatgattgccagcagatcctttaggtccatttgctccagtgag 474
             |||||||||||||||||||| |   ||| || |||||| | ||||||||| ||  | |  
Sbjct: 47663 ttagggtacatgctcttcatcaaatccaccaaatccttcatgtccatttggtcttgagca 47604

                                            
Query: 475   catatgtatctctcagatggccctgccttgt 505
             |||||||| |||||| ||||||||| |||||
Sbjct: 47603 catatgtacctctcacatggccctgacttgt 47573



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 238   ggaagccggcatggttcgtcatct 261
             ||||||||||| ||||||||||||
Sbjct: 45648 ggaagccggcaaggttcgtcatct 45625



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                         
Query: 313   gtctcctcgatcttccttggtttccaccctagattcttcagctt 356
             ||||||||||  ||||| |||||||| || || |||||||||||
Sbjct: 45582 gtctcctcgagtttcctaggtttccagcccagcttcttcagctt 45539



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 238   ggaagccggcatggttcgtcatct 261
             ||||||||||| ||||||||||||
Sbjct: 37257 ggaagccggcaaggttcgtcatct 37234



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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 515     ggagcaacgcatcggcaacatcgcg 539
               |||||| ||||||||||||||||||
Sbjct: 4932721 ggagcagcgcatcggcaacatcgcg 4932697



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>gb|AC090579.6| Homo sapiens chromosome 8, clone RP11-649G15, complete sequence
          Length = 186066

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 452    ttaggtccatttgctccagtg 472
              |||||||||||||||||||||
Sbjct: 123301 ttaggtccatttgctccagtg 123321



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>gb|AE012070.1| Xanthomonas axonopodis pv. citri str. 306,  section 448 of 469 of the
            complete genome
          Length = 12891

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 515  ggagcaacgcatcggcaacatcgcg 539
            |||||| ||||||||||||||||||
Sbjct: 9036 ggagcagcgcatcggcaacatcgcg 9012



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>gb|AC023344.4|AC023344 Homo sapiens BAC clone RP11-395G23 from 8, complete sequence
          Length = 186751

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 452   ttaggtccatttgctccagtg 472
             |||||||||||||||||||||
Sbjct: 16176 ttaggtccatttgctccagtg 16196



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>gb|DQ020202.1| Homo sapiens oxidation resistance 1 (OXR1) gene, complete cds
          Length = 96584

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 452   ttaggtccatttgctccagtg 472
             |||||||||||||||||||||
Sbjct: 18947 ttaggtccatttgctccagtg 18967



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>gb|AC117396.2| Homo sapiens 3 BAC RP11-89E16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 147103

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 168   aaatgcaatattaatggcaca 188
             |||||||||||||||||||||
Sbjct: 86332 aaatgcaatattaatggcaca 86312



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>dbj|AP000856.3| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1539E1
          Length = 152130

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 452   ttaggtccatttgctccagtg 472
             |||||||||||||||||||||
Sbjct: 44660 ttaggtccatttgctccagtg 44680



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>dbj|AP004285.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1356H11
          Length = 145327

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 452    ttaggtccatttgctccagtg 472
              |||||||||||||||||||||
Sbjct: 103445 ttaggtccatttgctccagtg 103465



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>gb|AC118700.10| Mus musculus chromosome 3, clone RP23-24O21, complete sequence
          Length = 220310

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   atttttgtgaaacacatttc 152
             ||||||||||||||||||||
Sbjct: 32268 atttttgtgaaacacatttc 32249



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>ref|XM_870006.1| PREDICTED: Bos taurus similar to monoacylglycerol O-acyltransferase
           2 (LOC617698), mRNA
          Length = 831

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 314 tctcctcgatcttccttggtttccaccc 341
           ||||||||||||||| |||| |||||||
Sbjct: 272 tctcctcgatcttccctggtatccaccc 299



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>gb|AC118755.7| Homo sapiens chromosome 17, clone RP11-55L4, complete sequence
          Length = 188765

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   tatttttgtgaaacacattt 151
             ||||||||||||||||||||
Sbjct: 19506 tatttttgtgaaacacattt 19487



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>gb|AY259195.1| Uncultured soil bacterium HJALFZB03 nitrous oxide reductase
           catalytic subunit (nosZ) gene, partial cds
          Length = 660

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 593 tcatgtagacgaggaccttgctgc 616
           ||||||||||| ||||||||||||
Sbjct: 445 tcatgtagacgcggaccttgctgc 422



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>emb|BX295538.1|NC45B12 Neurospora crassa DNA linkage group VI Cosmid clone 45B12
          Length = 37178

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 574   gtgtcagggcctccttttat 593
             ||||||||||||||||||||
Sbjct: 23886 gtgtcagggcctccttttat 23867



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>emb|BX571955.15| Zebrafish DNA sequence from clone DKEY-27B3 in linkage group 10, complete
              sequence
          Length = 272498

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 163    aggccaaatgcaatattaat 182
              ||||||||||||||||||||
Sbjct: 166133 aggccaaatgcaatattaat 166152



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>gb|AC103870.3| Homo sapiens chromosome 11, clone RP11-702L21, complete sequence
          Length = 182598

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 454    aggtccatttgctccagtga 473
              ||||||||||||||||||||
Sbjct: 106612 aggtccatttgctccagtga 106593



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>gb|AC156504.5| Mus musculus 10 BAC RP24-315I19 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 208535

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 388    tcaaccatcttgtctacata 407
              ||||||||||||||||||||
Sbjct: 133830 tcaaccatcttgtctacata 133811



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 523     gcatcggcaacatcgcgaac 542
               ||||||||||||||||||||
Sbjct: 4892012 gcatcggcaacatcgcgaac 4892031



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>dbj|AP004646.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1122_A12
          Length = 149011

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 523   gcatcggcaacatcgcgaac 542
             ||||||||||||||||||||
Sbjct: 51266 gcatcggcaacatcgcgaac 51285



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>dbj|AP005440.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0056D04
          Length = 158118

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 523   gcatcggcaacatcgcgaac 542
             ||||||||||||||||||||
Sbjct: 96806 gcatcggcaacatcgcgaac 96825



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>emb|CR925790.6| Zebrafish DNA sequence from clone DKEY-275J21 in linkage group 10,
             complete sequence
          Length = 136117

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   aggccaaatgcaatattaat 182
             ||||||||||||||||||||
Sbjct: 14663 aggccaaatgcaatattaat 14682



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>gb|AC154388.4| Mus musculus BAC clone RP23-14P7 from chromosome 14, complete sequence
          Length = 246800

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     ccatcctgaatggactagtg 98
              ||||||||||||||||||||
Sbjct: 199142 ccatcctgaatggactagtg 199123



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>emb|CT030647.17| Mouse DNA sequence from clone RP23-379I9 on chromosome 14, complete
             sequence
          Length = 205598

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    ccatcctgaatggactagtg 98
             ||||||||||||||||||||
Sbjct: 64652 ccatcctgaatggactagtg 64633



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>dbj|AB047397.2| Zygosaccharomyces rouxii ZGCY2 mRNA for glycerol dehydrogenase,
           complete cds
          Length = 1093

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 438 tgccagcagatcctttaggt 457
           ||||||||||||||||||||
Sbjct: 597 tgccagcagatcctttaggt 578



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>dbj|AB047396.1| Zygosaccharomyces rouxii ZGCY1 gene for glycerol dehydrogenase,
           complete cds
          Length = 1447

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 438 tgccagcagatcctttaggt 457
           ||||||||||||||||||||
Sbjct: 762 tgccagcagatcctttaggt 743


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,816,994
Number of Sequences: 3902068
Number of extensions: 5816994
Number of successful extensions: 111046
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 110923
Number of HSP's gapped (non-prelim): 118
length of query: 643
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 620
effective length of database: 17,143,297,704
effective search space: 10628844576480
effective search space used: 10628844576480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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