>TGFA_RAT (P01134) Transforming growth factor alpha precursor (TGF-alpha)|
           (EGF-like TGF) (ETGF) (TGF type 1)
          Length = 159

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
 Frame = -3

Query: 253 CITH-GFLKFR--HAALLS*TRPSVKSVTWAAAVLMSIVAQYSIWSHIITCYLVKSCVVR 83
           C+ H G++  R  HA LL+    S K     A V++SIVA   +   IITC L+  C VR
Sbjct: 70  CVCHSGYVGVRCEHADLLAVVAASQKKQAITALVVVSIVALAVL---IITCVLIHCCQVR 126

>TGFA_PIG (Q06922) Transforming growth factor alpha precursor (TGF-alpha)|
           (EGF-like TGF) (ETGF) (TGF type 1)
          Length = 160

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
 Frame = -3

Query: 253 CITH-GFLKFR--HAALLS*TRPSVKSVTWAAAVLMSIVAQYSIWSHIITCYLVKSCVVR 83
           C+ H G++  R  HA LL+    S K     A V++SIVA   +   IITC L+  C VR
Sbjct: 71  CVCHSGYVGARCEHADLLAVVAASQKKQAITALVVVSIVALAVL---IITCVLIHCCQVR 127

>TGFA_HUMAN (P01135) Transforming growth factor alpha precursor (TGF-alpha)|
           (EGF-like TGF) (ETGF) (TGF type 1)
          Length = 160

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
 Frame = -3

Query: 253 CITH-GFLKFR--HAALLS*TRPSVKSVTWAAAVLMSIVAQYSIWSHIITCYLVKSCVVR 83
           C+ H G++  R  HA LL+    S K     A V++SIVA   +   IITC L+  C VR
Sbjct: 71  CVCHSGYVGARCEHADLLAVVAASQKKQAITALVVVSIVALAVL---IITCVLIHCCQVR 127

>TGFA_MACMU (P55244) Transforming growth factor alpha precursor (TGF-alpha)|
           (EGF-like TGF) (ETGF) (TGF type 1) (Fragment)
          Length = 121

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
 Frame = -3

Query: 253 CITH-GFLKFR--HAALLS*TRPSVKSVTWAAAVLMSIVAQYSIWSHIITCYLVKSCVVR 83
           C+ H G++  R  HA LL+    S K     A V++SIVA   +   IITC L+  C VR
Sbjct: 48  CVCHSGYVGARCEHADLLAVVAASQKKQAITALVVVSIVALAVL---IITCVLIHCCQVR 104

>CRIS2_MOUSE (P16563) Cysteine-rich secretory protein 2 precursor (CRISP-2)|
           (Testis-specific protein TPX-1)
          Length = 243

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -2

Query: 299 CKQPFCEHSCSMRSLVHHAWVLKIPTCCTAELNKTECKISDL 174
           C+   C +SC    L+ +   LK    C  EL KT+C+ + L
Sbjct: 196 CENGLCTNSCDFEDLLSNCESLKTSAGCKHELLKTKCQATCL 237

>TGFA_MOUSE (P48030) Transforming growth factor alpha precursor (TGF-alpha)|
           (EGF-like TGF) (ETGF) (TGF type 1)
          Length = 159

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
 Frame = -3

Query: 253 CITH-GFLKFR--HAALLS*TRPSVKSVTWAAAVLMSIVAQYSIWSHIITCYLVKSCVVR 83
           C+ H G++  R  HA LL+    S K     A V++SIVA   +   IITC L+  C +R
Sbjct: 70  CVCHSGYVGVRCEHADLLAVVAASQKKQAITALVVVSIVALAVL---IITCVLIHCCQLR 126

>BRD3_MOUSE (Q8K2F0) Bromodomain-containing protein 3 (Bromodomain-containing|
           FSH-like protein FSRG2)
          Length = 726

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = -1

Query: 477 DMEIGERPAHDNKGQPMSLAPGRWELFLRWSTSDRICRYSWPVFLPV 337
           D+E GE P H  K   +S      +  LR   S +   Y+WP + PV
Sbjct: 291 DLEDGEVPQHAGKKGKLSEHLRHCDSILREMLSKKHAAYAWPFYKPV 337

>TGFA_SHEEP (P98135) Transforming growth factor alpha precursor (TGF-alpha)|
           (EGF-like TGF) (ETGF) (TGF type 1) (Fragment)
          Length = 133

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
 Frame = -3

Query: 253 CITH-GFLKFR--HAALLS*TRPSVKSVTWAAAVLMSIVAQYSIWSHIITCYLVKSCVVR 83
           C+ H G++  R  HA LL+    S K     A V+++IVA   +   IITC L+  C VR
Sbjct: 70  CVCHSGYVGARCEHADLLAVVAASQKKQAITALVVVTIVALAVL---IITCVLIHCCEVR 126

>POLG_TMEVG (P08545) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat|
            protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein
            VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein
            P2A); Core protein P2B; Core protein P2C; Core protein
            P3A; Genome
          Length = 2303

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 17/49 (34%), Positives = 27/49 (55%)
 Frame = -1

Query: 630  LNRTEYLVPSV*YLNYYDFSGLVPLIFITTVVIFTLCSILKWRRSCLKT 484
            L  T+++  SV YL+  DF+  V L  +T V + T  S+  W +S L +
Sbjct: 1127 LKTTKFIAASVLYLHNPDFTTTVCLSLMTGVDLLTNDSVFDWLKSKLSS 1175

>KR102_HUMAN (P60368) Keratin-associated protein 10-2 (Keratin-associated|
           protein 10.2) (High sulfur keratin-associated protein
           10.2) (Keratin-associated protein 18-2)
           (Keratin-associated protein 18.2)
          Length = 255

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = -2

Query: 299 CKQPFCEHSCSMRSLVHHAWVLKIPTCCTAELNKTECKISDLGCCSTYEHSC 144
           C+Q  C+ +C   S    +   ++P CC A      C  S   CC   + SC
Sbjct: 121 CQQSSCQPACCASSSCQQS--CRVPVCCKAVCCVPTCSESSSSCCQ--QSSC 168

>PGBM_HUMAN (P98160) Basement membrane-specific heparan sulfate proteoglycan core|
            protein precursor (HSPG) (Perlecan) (PLC)
          Length = 4391

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = +1

Query: 361  ISTYAVTGAPSQEQLPATRRKAHRLTLVIMCRPLSNLHVLYCLEARSSPLQD 516
            ++T +++GA S   LPA     H L L +  +PL+   VL     +S P++D
Sbjct: 3927 VTTPSLSGAGSYLALPALTNTHHELRLDVEFKPLAPDGVLLFSGGKSGPVED 3978

>PGBM_MOUSE (Q05793) Basement membrane-specific heparan sulfate proteoglycan core|
            protein precursor (HSPG) (Perlecan) (PLC)
          Length = 3707

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +1

Query: 361  ISTYAVTGAPSQEQLPATRRKAHRLTLVIMCRPLSNLHVLYCLEARSSPLQD 516
            ++T +++GA S   LPA     H L L +  +PL    +L     +S P++D
Sbjct: 3244 VTTPSMSGAGSYLALPALTNTHHELRLDVEFKPLEPNGILLFSGGKSGPVED 3295


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,866,932
Number of Sequences: 219361
Number of extensions: 2458062
Number of successful extensions: 5781
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5778
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7366267610
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)