>gb|AC147259.3| Mus musculus BAC clone RP24-178N16 from chromosome Y, complete sequence
          Length = 149994

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 80     acaagagaaaaaggaggagc 99
              ||||||||||||||||||||
Sbjct: 104706 acaagagaaaaaggaggagc 104725

>gb|AC079809.4| Homo sapiens BAC clone RP11-958M14 from 7, complete sequence
          Length = 102918

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 81     caagagaaaaaggaggagctaggggaac 108
              ||||| |||||||||||| |||||||||
Sbjct: 100575 caagaaaaaaaggaggaggtaggggaac 100548

>gb|AC174806.2| Mus musculus BAC clone RP24-526I8 from chromosome y, complete
            sequence
          Length = 155247

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 80   acaagagaaaaaggaggagc 99
            ||||||||||||||||||||
Sbjct: 6323 acaagagaaaaaggaggagc 6342

>gb|AC093628.3| Homo sapiens BAC clone RP11-98N20 from 4, complete sequence
          Length = 159991

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 83     agagaaaaaggaggagctag 102
              ||||||||||||||||||||
Sbjct: 124092 agagaaaaaggaggagctag 124073

>gb|AC151581.2| Pan troglodytes BAC clone RP43-166C19 from chromosome 7, complete
              sequence
          Length = 180623

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 81     caagagaaaaaggaggagctaggggaac 108
              ||||| |||||||||||| |||||||||
Sbjct: 140763 caagaaaaaaaggaggaggtaggggaac 140790

>emb|AL121769.4|CNS01DSD Human chromosome 14 DNA sequence BAC R-299L17 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 167344

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    aacaagagaaaaaggaggag 98
             ||||||||||||||||||||
Sbjct: 65335 aacaagagaaaaaggaggag 65354

>gb|AC004063.1|AC004063 Homo sapiens chromosome 4 clone B32I8, complete sequence
          Length = 177014

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    agagaaaaaggaggagctag 102
             ||||||||||||||||||||
Sbjct: 59532 agagaaaaaggaggagctag 59513

>dbj|AP001862.2| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:2060O22, complete
             sequence
          Length = 111557

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    agagaaaaaggaggagctag 102
             ||||||||||||||||||||
Sbjct: 78153 agagaaaaaggaggagctag 78134

>gb|AC113013.15| Mus musculus chromosome 7, clone RP23-174K7, complete sequence
          Length = 235823

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 81     caagagaaaaaggaggagc 99
              |||||||||||||||||||
Sbjct: 208658 caagagaaaaaggaggagc 208640

>gb|AC110036.8| Mus musculus chromosome 7, clone RP23-254F9, complete sequence
          Length = 185681

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 79     aacaagagaaaaaggagga 97
              |||||||||||||||||||
Sbjct: 157762 aacaagagaaaaaggagga 157744

>gb|AF130866.6| Homo sapiens chromosome 8 clone GS1-172N13 map q24.22, complete
             sequence
          Length = 128891

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 82    aagagaaaaaggaggagct 100
             |||||||||||||||||||
Sbjct: 13490 aagagaaaaaggaggagct 13508

>gb|AC183838.2| Pan troglodytes BAC clone CH251-11K10 from chromosome 7, complete
             sequence
          Length = 153555

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 78    caacaagagaaaaaggagg 96
             |||||||||||||||||||
Sbjct: 52979 caacaagagaaaaaggagg 52961

>gb|AC004845.2| Homo sapiens PAC clone RP4-635O5 from 7, complete sequence
          Length = 69847

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 78    caacaagagaaaaaggagg 96
             |||||||||||||||||||
Sbjct: 56823 caacaagagaaaaaggagg 56805

>gb|AC116734.14| Mus musculus chromosome 7, clone RP23-359D11, complete sequence
          Length = 217741

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 79    aacaagagaaaaaggagga 97
             |||||||||||||||||||
Sbjct: 21860 aacaagagaaaaaggagga 21842

>gb|AF517718.1| Mus musculus chromosome 13 CSL237 proviral integration site
          Length = 465

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 82  aagagaaaaaggaggagctaggg 104
           ||||||||||| |||||||||||
Sbjct: 139 aagagaaaaagtaggagctaggg 117

>gb|AC102076.9| Mus musculus chromosome 7, clone RP23-401P12, complete sequence
          Length = 199219

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 81    caagagaaaaaggaggagc 99
             |||||||||||||||||||
Sbjct: 11327 caagagaaaaaggaggagc 11309

>dbj|BS000589.1| Pan troglodytes chromosome Y clone:PTB-234J08, complete sequence
          Length = 179633

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 76     gacaacaagagaaaaaggaggag 98
              |||| ||||||||||||||||||
Sbjct: 101403 gacagcaagagaaaaaggaggag 101425

>dbj|BS000592.1| Pan troglodytes chromosome Y clone:PTB-024O19, complete sequence
          Length = 133142

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 76     gacaacaagagaaaaaggaggag 98
              |||| ||||||||||||||||||
Sbjct: 117314 gacagcaagagaaaaaggaggag 117336

>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 76       gacaacaagagaaaaaggaggag 98
                |||| ||||||||||||||||||
Sbjct: 20486495 gacagcaagagaaaaaggaggag 20486473

>gb|AC118550.2| Homo sapiens chromosome 1 clone RP11-76L19, complete sequence
          Length = 43131

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 39    ctaagcaaactgaaacagg 57
             |||||||||||||||||||
Sbjct: 40962 ctaagcaaactgaaacagg 40944

>gb|AC023170.10| Homo sapiens chromosome 10 clone RP11-373P23, complete sequence
          Length = 195448

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 85     agaaaaaggaggagctagg 103
              |||||||||||||||||||
Sbjct: 136452 agaaaaaggaggagctagg 136470

>ref|XM_691034.1| PREDICTED: Danio rerio similar to Kinesin-like protein KIF3B
            (Microtubule plus end-directed kinesin motor 3B)
            (LOC567733), mRNA
          Length = 1425

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 81   caagagaaaaaggaggagc 99
            |||||||||||||||||||
Sbjct: 1131 caagagaaaaaggaggagc 1149

>emb|CR523748.1| Gallus gallus finished cDNA, clone ChEST110k2
          Length = 1681

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 78   caacaagagaaaaaggagg 96
            |||||||||||||||||||
Sbjct: 1329 caacaagagaaaaaggagg 1347

>gb|AC107627.3| Homo sapiens chromosome 1 clone RP1-281L18, complete sequence
          Length = 90509

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 39   ctaagcaaactgaaacagg 57
            |||||||||||||||||||
Sbjct: 2327 ctaagcaaactgaaacagg 2309

>emb|CR385146.1| Gallus gallus finished cDNA, clone ChEST448h14
          Length = 832

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 78  caacaagagaaaaaggagg 96
           |||||||||||||||||||
Sbjct: 480 caacaagagaaaaaggagg 498

>gb|AC151722.2| Pan troglodytes BAC clone CH251-580N2 from chromosome y, complete
             sequence
          Length = 182549

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 76    gacaacaagagaaaaaggaggag 98
             |||| ||||||||||||||||||
Sbjct: 70663 gacagcaagagaaaaaggaggag 70685

>gb|AC138185.2| Homo sapiens chromosome 8, clone RP11-640O8, complete sequence
          Length = 152309

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 82    aagagaaaaaggaggagct 100
             |||||||||||||||||||
Sbjct: 32030 aagagaaaaaggaggagct 32048

>gb|AC017032.3|AC017032 Homo sapiens BAC clone RP11-292E8 from Y, complete sequence
          Length = 45123

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 76    gacaacaagagaaaaaggaggag 98
             |||| ||||||||||||||||||
Sbjct: 16122 gacagcaagagaaaaaggaggag 16144

>emb|AJ320511.1|HSA320511 Homo sapiens partial mtTFA gene, intron 2
          Length = 1851

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 85  agaaaaaggaggagctagg 103
           |||||||||||||||||||
Sbjct: 325 agaaaaaggaggagctagg 307

>gb|AC155244.2| Mus musculus BAC clone RP24-318B2 from 13, complete sequence
          Length = 198847

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 82     aagagaaaaaggaggagctaggg 104
              ||||||||||| |||||||||||
Sbjct: 154386 aagagaaaaagtaggagctaggg 154364

>gb|AY107314.1| Zea mays PCO076491 mRNA sequence
          Length = 1157

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 49  tgaaacagggatgatgatt 67
           |||||||||||||||||||
Sbjct: 262 tgaaacagggatgatgatt 244

>dbj|AP005856.2| Homo sapiens genomic DNA, chromosome 8q24, clone: KB1568E2, complete
             sequence
          Length = 160612

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 82    aagagaaaaaggaggagct 100
             |||||||||||||||||||
Sbjct: 30816 aagagaaaaaggaggagct 30834

>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome
          Length = 2905187

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 37      agctaagcaaactgaaaca 55
               |||||||||||||||||||
Sbjct: 2719375 agctaagcaaactgaaaca 2719393

>gb|AC163743.6| Mus musculus BAC clone RP23-415J4 from chromosome 13, complete sequence
          Length = 198305

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 82    aagagaaaaaggaggagctaggg 104
             ||||||||||| |||||||||||
Sbjct: 34466 aagagaaaaagtaggagctaggg 34444


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,094,051
Number of Sequences: 3902068
Number of extensions: 1094051
Number of successful extensions: 80961
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80879
Number of HSP's gapped (non-prelim): 82
length of query: 122
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 101
effective length of database: 17,151,101,840
effective search space: 1732261285840
effective search space used: 1732261285840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)