ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal18o16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_104006.1| Arabidopsis thaliana transmembrane receptor AT1... 42 2.1
2ref|NM_001036092.1| Arabidopsis thaliana transmembrane receptor ... 42 2.1
3gb|BT015497.1| Arabidopsis thaliana At1g51280 mRNA sequence 42 2.1
4gb|AC125565.5| Rattus norvegicus 2 BAC CH230-9H16 (Children's Ho... 42 2.1
5emb|AL391817.18| Human DNA sequence from clone RP11-91B9 on chro... 42 2.1
6gb|AC102801.2| Homo sapiens chromosome 8, clone RP11-960P16, com... 42 2.1
7gb|AC100782.2| Homo sapiens, clone RP11-300E4, complete sequence 42 2.1
8dbj|AK221479.1| Arabidopsis thaliana mRNA for hypothetical prote... 42 2.1
9emb|AL049831.2|CNS00008 Human chromosome 14 DNA sequence BAC R-3... 42 2.1
10gb|AC006085.1| Arabidopsis thaliana chromosome I BAC F11M15 geno... 42 2.1
11ref|NM_002711.2| Homo sapiens protein phosphatase 1, regulatory ... 40 8.2
12gb|AC118696.14| Mus musculus chromosome 3, clone RP24-62O16, com... 40 8.2
13gb|AC110908.13| Mus musculus chromosome 7, clone RP24-181E10, co... 40 8.2
14ref|XM_426318.1| PREDICTED: Gallus gallus similar to Serine prot... 40 8.2
15gb|AC157552.10| Mus musculus chromosome 7, clone RP23-89C10, com... 40 8.2
16gb|AC092465.5| Homo sapiens BAC clone RP11-473L7 from 7, complet... 40 8.2
17ref|XM_823325.1| Trypanosoma brucei TREU927 hypothetical protein... 40 8.2
18gb|CP000001.1| Bacillus cereus E33L, complete genome 40 8.2
19gb|AC091518.22| Mus musculus strain 129/SvJ clone mgs1-257j2 map... 40 8.2
20emb|AL031054.1|HS48G12 Human DNA sequence from clone RP1-48G12 o... 40 8.2
21ref|NM_001030728.1| Gallus gallus pre-B-cell colony enhancing fa... 40 8.2
22emb|AL929016.5| Zebrafish DNA sequence from clone DKEY-24J9 in l... 40 8.2
23emb|CR513786.5| Zebrafish DNA sequence from clone CH211-92F19 in... 40 8.2
24emb|BX511181.13| Zebrafish DNA sequence from clone DKEY-100H5 in... 40 8.2
25gb|AC093841.3| Homo sapiens BAC clone RP11-438F11 from 4, comple... 40 8.2
26gb|AF083031.2|AF083031 Guillardia theta nucleomorph chromosome 3... 40 8.2
27emb|BX005336.10| Zebrafish DNA sequence from clone DKEY-85K7 in ... 40 8.2
28gb|AC010903.8| Homo sapiens BAC clone RP11-550H9 from 2, complet... 40 8.2
29gb|AC013480.12| Homo sapiens BAC clone RP11-564O16 from 2, compl... 40 8.2
30gb|AC129176.6| Mus musculus BAC clone RP23-124D10 from chromosom... 40 8.2
31gb|AC133942.3| Mus musculus BAC clone RP23-472J11 from chromosom... 40 8.2
32emb|BX855607.2| Mouse DNA sequence from clone RP24-562D24 on chr... 40 8.2
33dbj|BS000125.1| Pan troglodytes chromosome 22 clone:PTB-147B08, ... 40 8.2
34emb|BX247945.6| Zebrafish DNA sequence from clone CH211-209L14 i... 40 8.2
35gb|AY946242.1| Gallus gallus visfatin (PBEF1) mRNA, complete cds 40 8.2
36gb|AC154381.2| Mus musculus BAC clone RP23-42E2 from 16, complet... 40 8.2
37emb|AL355885.4|CNS05TCW Human chromosome 14 DNA sequence BAC R-4... 40 8.2
38dbj|AP001730.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 8.2
39dbj|AP002806.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 8.2
40gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 40 8.2
41gb|AC002980.1|AC002980 Homo sapiens Xp22 BAC 620F15 (Genome Syst... 40 8.2
42gb|AF024578.1|HSPPP1R3S3 Homo sapiens type-1 protein phosphatase... 40 8.2
43emb|AL807830.10| Mouse DNA sequence from clone RP23-303I9 on chr... 40 8.2
44emb|AL121603.4|CNS01DS0 Human chromosome 14 DNA sequence BAC R-7... 40 8.2
45gb|AC152500.7| Mus musculus BAC clone RP24-555P14 from chromosom... 40 8.2
46dbj|AP000157.1| Homo sapiens genomic DNA, chromosome 21q22.2, DS... 40 8.2
47dbj|AP000014.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrom... 40 8.2
48dbj|AP001424.1| Homo sapiens genomic DNA, chromosome 21q22.2, cl... 40 8.2 
>ref|NM_104006.1| Arabidopsis thaliana transmembrane receptor AT1G51280 transcript
           variant AT1G51280.1 mRNA, complete cds
          Length = 723

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 486 atcgtccgtgggggaggcagcattg 510
           ||||||||||| |||||||||||||
Sbjct: 57  atcgtccgtggaggaggcagcattg 33
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>ref|NM_001036092.1| Arabidopsis thaliana transmembrane receptor AT1G51280 transcript
           variant AT1G51280.2 mRNA, complete cds
          Length = 818

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 486 atcgtccgtgggggaggcagcattg 510
           ||||||||||| |||||||||||||
Sbjct: 57  atcgtccgtggaggaggcagcattg 33
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>gb|BT015497.1| Arabidopsis thaliana At1g51280 mRNA sequence
          Length = 720

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 486 atcgtccgtgggggaggcagcattg 510
           ||||||||||| |||||||||||||
Sbjct: 54  atcgtccgtggaggaggcagcattg 30
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>gb|AC125565.5| Rattus norvegicus 2 BAC CH230-9H16 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 217080

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 507    attgcttactgaagaatggct 527
              |||||||||||||||||||||
Sbjct: 100928 attgcttactgaagaatggct 100948
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>emb|AL391817.18| Human DNA sequence from clone RP11-91B9 on chromosome 1 Contains the
             PRELP gene for proline arginine-rich end leucine-rich
             repeat protein and the OPTC gene for opticin, complete
             sequence
          Length = 162436

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 269   cagtttgtatctttgaaaaat 289
             |||||||||||||||||||||
Sbjct: 86264 cagtttgtatctttgaaaaat 86244
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>gb|AC102801.2| Homo sapiens chromosome 8, clone RP11-960P16, complete sequence
          Length = 119671

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 54     tattacaaattatttccaaac 74
              |||||||||||||||||||||
Sbjct: 114116 tattacaaattatttccaaac 114136
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>gb|AC100782.2| Homo sapiens, clone RP11-300E4, complete sequence
          Length = 185123

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 54     tattacaaattatttccaaac 74
              |||||||||||||||||||||
Sbjct: 143168 tattacaaattatttccaaac 143148
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>dbj|AK221479.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
           clone: RAFL07-42-B22
          Length = 1217

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 486 atcgtccgtgggggaggcagcattg 510
           ||||||||||| |||||||||||||
Sbjct: 447 atcgtccgtggaggaggcagcattg 423
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>emb|AL049831.2|CNS00008 Human chromosome 14 DNA sequence BAC R-330O19 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 218956

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 46     ttttctagtattacaaattat 66
              |||||||||||||||||||||
Sbjct: 142438 ttttctagtattacaaattat 142418
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>gb|AC006085.1| Arabidopsis thaliana chromosome I BAC F11M15 genomic sequence, complete
             sequence
          Length = 105807

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 486   atcgtccgtgggggaggcagcattg 510
             ||||||||||| |||||||||||||
Sbjct: 62336 atcgtccgtggaggaggcagcattg 62312
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>ref|NM_002711.2| Homo sapiens protein phosphatase 1, regulatory (inhibitor) subunit 3A
            (glycogen and sarcoplasmic reticulum binding subunit,
            skeletal muscle) (PPP1R3A), mRNA
          Length = 6779

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 54   tattacaaattatttccaaa 73
            ||||||||||||||||||||
Sbjct: 6587 tattacaaattatttccaaa 6568
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>gb|AC118696.14| Mus musculus chromosome 3, clone RP24-62O16, complete sequence
          Length = 190616

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 453    atctttaccatcctcatctt 472
              ||||||||||||||||||||
Sbjct: 142710 atctttaccatcctcatctt 142691
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>gb|AC110908.13| Mus musculus chromosome 7, clone RP24-181E10, complete sequence
          Length = 173230

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 560   cttctgtgcttctgtttggg 579
             ||||||||||||||||||||
Sbjct: 27874 cttctgtgcttctgtttggg 27893
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>ref|XM_426318.1| PREDICTED: Gallus gallus similar to Serine protease DESC1 precursor
            (LOC428762), mRNA
          Length = 1830

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 243  aagagaagagcagaagctat 262
            ||||||||||||||||||||
Sbjct: 1135 aagagaagagcagaagctat 1154
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>gb|AC157552.10| Mus musculus chromosome 7, clone RP23-89C10, complete sequence
          Length = 195587

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 560    cttctgtgcttctgtttggg 579
              ||||||||||||||||||||
Sbjct: 188784 cttctgtgcttctgtttggg 188803
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>gb|AC092465.5| Homo sapiens BAC clone RP11-473L7 from 7, complete sequence
          Length = 188158

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     tattacaaattatttccaaa 73
              ||||||||||||||||||||
Sbjct: 161553 tattacaaattatttccaaa 161572
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>ref|XM_823325.1| Trypanosoma brucei TREU927 hypothetical protein (Tb11.02.0860)
            partial mRNA
          Length = 2730

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 347  atggcggtttcgcacgagca 366
            ||||||||||||||||||||
Sbjct: 2593 atggcggtttcgcacgagca 2574
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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 36      aattgataagttttctagta 55
               ||||||||||||||||||||
Sbjct: 2276052 aattgataagttttctagta 2276033
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>gb|AC091518.22| Mus musculus strain 129/SvJ clone mgs1-257j2 map 10, complete
            sequence
          Length = 124270

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 269  cagtttgtatctttgaaaaatctt 292
            |||||||||||||| |||||||||
Sbjct: 1239 cagtttgtatcttttaaaaatctt 1262
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>emb|AL031054.1|HS48G12 Human DNA sequence from clone RP1-48G12 on chromosome Xq27.1-27.3
              Contains a CpG island, complete sequence
          Length = 199016

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 46     ttttctagtattacaaattatttc 69
              |||||||| |||||||||||||||
Sbjct: 123712 ttttctagaattacaaattatttc 123689
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>ref|NM_001030728.1| Gallus gallus pre-B-cell colony enhancing factor 1 (PBEF1), mRNA
          Length = 1538

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 80   tgcagaagctaactagagat 99
            ||||||||||||||||||||
Sbjct: 1219 tgcagaagctaactagagat 1238
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>emb|AL929016.5| Zebrafish DNA sequence from clone DKEY-24J9 in linkage group 4 Contains
              the gene for a novel protein (zgc:63880), the 3' end of the
              gene for a novel protein similar to vertebrate KCND2, the
              5' end of the ing3 gene for inhibitor of growth family
              member 3 and a CpG island, complete sequence
          Length = 200582

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 58     acaaattatttccaaaccca 77
              ||||||||||||||||||||
Sbjct: 164874 acaaattatttccaaaccca 164893
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>emb|CR513786.5| Zebrafish DNA sequence from clone CH211-92F19 in linkage group 14,
             complete sequence
          Length = 97391

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     tttgtgttgttttgccttct 21
             ||||||||||||||||||||
Sbjct: 83940 tttgtgttgttttgccttct 83921
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>emb|BX511181.13| Zebrafish DNA sequence from clone DKEY-100H5 in linkage group 24,
             complete sequence
          Length = 160005

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    caaattatttccaaacccaa 78
             ||||||||||||||||||||
Sbjct: 10105 caaattatttccaaacccaa 10086
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>gb|AC093841.3| Homo sapiens BAC clone RP11-438F11 from 4, complete sequence
          Length = 168190

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 549   aattgttccctcttctgtgcttct 572
             ||||||||||||||||||| ||||
Sbjct: 24012 aattgttccctcttctgtggttct 23989
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>gb|AF083031.2|AF083031 Guillardia theta nucleomorph chromosome 3, complete sequence
          Length = 174133

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 273   ttgtatctttgaaaaatctt 292
             ||||||||||||||||||||
Sbjct: 17575 ttgtatctttgaaaaatctt 17594
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>emb|BX005336.10| Zebrafish DNA sequence from clone DKEY-85K7 in linkage group 7, complete
              sequence
          Length = 233826

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 238    ctcacaagagaagagcagaa 257
              ||||||||||||||||||||
Sbjct: 213085 ctcacaagagaagagcagaa 213104
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>gb|AC010903.8| Homo sapiens BAC clone RP11-550H9 from 2, complete sequence
          Length = 91723

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 545   cctgaattgttccctcttct 564
             ||||||||||||||||||||
Sbjct: 60454 cctgaattgttccctcttct 60435
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>gb|AC013480.12| Homo sapiens BAC clone RP11-564O16 from 2, complete sequence
          Length = 128466

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 66    tttccaaacccaagtgcaga 85
             ||||||||||||||||||||
Sbjct: 24455 tttccaaacccaagtgcaga 24474
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>gb|AC129176.6| Mus musculus BAC clone RP23-124D10 from chromosome unknown, complete
              sequence
          Length = 211031

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 560    cttctgtgcttctgtttggg 579
              ||||||||||||||||||||
Sbjct: 119766 cttctgtgcttctgtttggg 119747
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>gb|AC133942.3| Mus musculus BAC clone RP23-472J11 from chromosome 7, complete sequence
          Length = 186014

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 560    cttctgtgcttctgtttggg 579
              ||||||||||||||||||||
Sbjct: 158511 cttctgtgcttctgtttggg 158492
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>emb|BX855607.2| Mouse DNA sequence from clone RP24-562D24 on chromosome X, complete
             sequence
          Length = 24086

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 429   attcgtccttgttctctact 448
             ||||||||||||||||||||
Sbjct: 13652 attcgtccttgttctctact 13633
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>dbj|BS000125.1| Pan troglodytes chromosome 22 clone:PTB-147B08, map 22, complete
             sequences
          Length = 220932

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    ccaaacccaagtgcagaagc 88
             ||||||||||||||||||||
Sbjct: 72387 ccaaacccaagtgcagaagc 72368
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>emb|BX247945.6| Zebrafish DNA sequence from clone CH211-209L14 in linkage group 24,
             complete sequence
          Length = 199345

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    caaattatttccaaacccaa 78
             ||||||||||||||||||||
Sbjct: 31863 caaattatttccaaacccaa 31844
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>gb|AY946242.1| Gallus gallus visfatin (PBEF1) mRNA, complete cds
          Length = 1538

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 80   tgcagaagctaactagagat 99
            ||||||||||||||||||||
Sbjct: 1219 tgcagaagctaactagagat 1238
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>gb|AC154381.2| Mus musculus BAC clone RP23-42E2 from 16, complete sequence
          Length = 201052

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 47    tttctagtattacaaattatttcc 70
             |||||||||||||||| |||||||
Sbjct: 58021 tttctagtattacaaagtatttcc 58044
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>emb|AL355885.4|CNS05TCW Human chromosome 14 DNA sequence BAC R-434O22 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 174442

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 556    ccctcttctgtgcttctgtttggg 579
              |||| |||||||||||||||||||
Sbjct: 154253 ccctgttctgtgcttctgtttggg 154230
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>dbj|AP001730.1| Homo sapiens genomic DNA, chromosome 21q, section 74/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    ccaaacccaagtgcagaagc 88
             ||||||||||||||||||||
Sbjct: 31275 ccaaacccaagtgcagaagc 31256
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>dbj|AP002806.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-721F8, complete
             sequence
          Length = 161871

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 503   cagcattgcttactgaagaa 522
             ||||||||||||||||||||
Sbjct: 80078 cagcattgcttactgaagaa 80097
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>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 36      aattgataagttttctagta 55
               ||||||||||||||||||||
Sbjct: 2272581 aattgataagttttctagta 2272562
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>gb|AC002980.1|AC002980 Homo sapiens Xp22 BAC 620F15 (Genome Systems BAC library) complete
              sequence
          Length = 141475

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 554    ttccctcttctgtgcttctg 573
              ||||||||||||||||||||
Sbjct: 128364 ttccctcttctgtgcttctg 128345
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>gb|AF024578.1|HSPPP1R3S3 Homo sapiens type-1 protein phosphatase skeletal muscle glycogen
            targeting subunit (PPP1R3) gene, exon 4, and complete cds
          Length = 7130

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 54   tattacaaattatttccaaa 73
            ||||||||||||||||||||
Sbjct: 5733 tattacaaattatttccaaa 5714
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>emb|AL807830.10| Mouse DNA sequence from clone RP23-303I9 on chromosome 4, complete
             sequence
          Length = 79426

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 66    tttccaaacccaagtgcaga 85
             ||||||||||||||||||||
Sbjct: 52284 tttccaaacccaagtgcaga 52303
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>emb|AL121603.4|CNS01DS0 Human chromosome 14 DNA sequence BAC R-73E17 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 141534

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 556   ccctcttctgtgcttctgtttggg 579
             |||| |||||||||||||||||||
Sbjct: 38206 ccctgttctgtgcttctgtttggg 38183
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>gb|AC152500.7| Mus musculus BAC clone RP24-555P14 from chromosome 10, complete
             sequence
          Length = 170235

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 269   cagtttgtatctttgaaaaatctt 292
             |||||||||||||| |||||||||
Sbjct: 57947 cagtttgtatcttttaaaaatctt 57970
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>dbj|AP000157.1| Homo sapiens genomic DNA, chromosome 21q22.2, DSCR region, clone
             D47-S479, segment 9/16, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    ccaaacccaagtgcagaagc 88
             ||||||||||||||||||||
Sbjct: 78692 ccaaacccaagtgcagaagc 78673
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>dbj|AP000014.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrome region, segment 7/13
          Length = 302521

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 69     ccaaacccaagtgcagaagc 88
              ||||||||||||||||||||
Sbjct: 215609 ccaaacccaagtgcagaagc 215590
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>dbj|AP001424.1| Homo sapiens genomic DNA, chromosome 21q22.2, clone:S253, LB7T-ERG
             region, complete sequence
          Length = 70042

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    ccaaacccaagtgcagaagc 88
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Sbjct: 40872 ccaaacccaagtgcagaagc 40853


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,593,027
Number of Sequences: 3902068
Number of extensions: 5593027
Number of successful extensions: 109998
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 109835
Number of HSP's gapped (non-prelim): 163
length of query: 600
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 577
effective length of database: 17,143,297,704
effective search space: 9891682775208
effective search space used: 9891682775208
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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