>SIAH2_HUMAN (O43255) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia|
           homolog 2) (Siah-2) (hSiah2)
          Length = 324

 Score = 38.5 bits (88), Expect = 0.015
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
 Frame = +3

Query: 48  ANRPAKKNPHPQGTKKRREASPGQTL*VSTANPPSLLM--AGALVDGDGGRPVEHAGAAA 221
           AN+P  K P PQ       A+P     +S A P S  +  A A++ G GG     AG  +
Sbjct: 11  ANKPCSKQPPPQPQHTPSPAAPPAAATISAAGPGSSAVPAAAAVISGPGGG--GGAGPVS 68

Query: 222 PRHHQV 239
           P+HH++
Sbjct: 69  PQHHEL 74

>AMX1_CAEEL (Q21988) Amine oxidase family member 1|
          Length = 783

 Score = 33.9 bits (76), Expect = 0.38
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +1

Query: 448 LDNPPFLQREKISTVRKNFHFATLLIHEEGRCFL--RNLLDGELGLDGRQIVDAV 606
           ++NP  L  E+I    +N +F   LI E GRCF   R  LD ++ L    ++DA+
Sbjct: 370 INNPITLLCEQIGIKYRNSNFFCPLIDENGRCFTLERKELDDQVDLHYNNVLDAI 424

>SUHW4_HUMAN (Q6N043) Suppressor of hairy wing homolog 4|
          Length = 979

 Score = 33.5 bits (75), Expect = 0.50
 Identities = 30/87 (34%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
 Frame = -2

Query: 485 LIFSLCRKGGLSKYYDGKSQSFACMSEVRCLEDLPKKRPYN----KKMKPCRSHVEIDGD 318
           L+F L +  GLS Y  G + S A MSE   L   P     N    KK KP  S V     
Sbjct: 144 LLFDLTQDTGLSHYQGGPTLSMAGMSESSFLSKRPSTSEVNNVNPKKPKPSES-VSGANS 202

Query: 317 QRACP---APGSNNSSKVVAKPTSGSS 246
               P   +P   +S  ++AK T+ SS
Sbjct: 203 SAVLPSVKSPSVTSSQAMLAKGTNTSS 229

>PERC_AEDAE (P82600) Chorion peroxidase precursor (EC 1.11.1.7) [Contains:|
           Chorion peroxidase light chain; Chorion peroxidase heavy
           chain]
          Length = 791

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 19/71 (26%), Positives = 34/71 (47%)
 Frame = -2

Query: 440 DGKSQSFACMSEVRCLEDLPKKRPYNKKMKPCRSHVEIDGDQRACPAPGSNNSSKVVAKP 261
           D   Q+  CM+ + C+ D  KK      +KPC +   +DG    CP+   N +S  V + 
Sbjct: 51  DACEQNEVCMAPIECILDAKKK----AILKPCSTVPSVDG--ICCPSSEHNGTSSRVQQS 104

Query: 260 TSGSSCANLMM 228
           +   +  +L++
Sbjct: 105 SEEHAADHLVL 115

>SIAH2_RAT (Q8R4T2) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia|
           homolog 2) (Siah-2)
          Length = 325

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
 Frame = +3

Query: 48  ANRPAKKNPHPQGTKKRRE-ASPGQTL*VSTANPPSLLM--AGALVDGDGGRPVEHAGAA 218
           AN+P  K P P  T      A+P     +S A P S  +  A A++ G G      AG  
Sbjct: 11  ANKPCSKQPPPPQTPHAPSPAAPPAAATISAAGPGSSAVPAAAAVISGPGAGG--GAGPV 68

Query: 219 APRHHQV 239
           +P+HH++
Sbjct: 69  SPQHHEL 75

>SUHW4_MOUSE (Q68FE8) Suppressor of hairy wing homolog 4|
          Length = 974

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
 Frame = -2

Query: 485 LIFSLCRKGGLSKYYDGKSQSFACMSEVRCLEDLPKKRPYN----KKMKPCRSHVEIDGD 318
           L+F L +  GLS Y  G + S A ++E   L   P     +    KK KP  +   ID  
Sbjct: 156 LLFDLTQDTGLSHYQGGPTLSIAGLNETSFLSKRPSGSDISSVNPKKPKPSENTSGID-- 213

Query: 317 QRACPAPGSNNSSKVVA---KPTSGSSCAN 237
             A     S  S  V++    P+ G++C++
Sbjct: 214 --ASSVISSEKSPSVISLQVVPSQGANCSS 241

>RS14B_STRCO (Q9X8K9) 30S ribosomal protein S14-2|
          Length = 101

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
 Frame = -1

Query: 273 SRQADLRELLRKPDD-GAERQLQHALQASRHPRQQERLPSVGREGSRLRLRVSVQGWLRV 97
           +R+A+L+E+LR+P    AER     L A R  R+Q R  S  R  +R ++    +G+LRV
Sbjct: 22  ARRAELKEVLRRPSSTEAER-----LAAQRELRRQPRDASPTRVRNRDQIDGRPRGYLRV 76

Query: 96  SSL 88
             L
Sbjct: 77  FGL 79

>LY10_HUMAN (Q13342) Nuclear body protein SP140 (Nuclear autoantigen Sp-140)|
           (Speckled 140 kDa) (LYSp100 protein)
           (Lymphoid-restricted homolog of Sp100)
          Length = 882

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 22/84 (26%), Positives = 35/84 (41%)
 Frame = -2

Query: 413 MSEVRCLEDLPKKRPYNKKMKPCRSHVEIDGDQRACPAPGSNNSSKVVAKPTSGSSCANL 234
           M+ V  LED P+  PY K+      H   + D  A P    ++S++      S  SC  L
Sbjct: 145 MNNVNDLEDRPRLLPYGKQENSNACH---EMDDIAVPQEALSSSAR-CEPGFSSESCEQL 200

Query: 233 MMARSGSSSMLYRPPAIPVNKSAC 162
            + ++G       P  +P    +C
Sbjct: 201 ALPKAGGGDAEDAPSLLPGGGVSC 224

>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)|
            (High molecular weight salivary mucin MG1) (Sublingual
            gland mucin)
          Length = 5703

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -2

Query: 347  CRSHVEIDGDQRACPAPGSNNSSKVVAKPTSGSSCANLMMAR 222
            C  H +ID  Q ACP      SS  ++ P+    C N +  R
Sbjct: 4914 CNQHCDIDRFQGACPTSPPPVSSAPLSSPSPAPGCDNAIPLR 4955

>MUTL_XYLFA (Q9PFB8) DNA mismatch repair protein mutL|
          Length = 619

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 36/132 (27%), Positives = 46/132 (34%), Gaps = 1/132 (0%)
 Frame = +3

Query: 120 TL*VSTANPPSLLMAGALVDGDGGR-PVEHAGAAAPRHHQVCAGAPGGRLGDYLAAVVRT 296
           TL  + A  P L +    V G+G R PV HA + + R      G     LG Y A+    
Sbjct: 325 TLAQTRAGTPPLAVGAGDVGGEGARPPVRHAVSFSGRR-----GGASHVLGSYSASTAPL 379

Query: 297 RRGASSLVTVDLDVAPAWXXXXXXXXXXXXXXXAPHLRHAREGLGLAVVVLGQPPFPAKR 476
            + A S+   D   APA                 P +   + GL LA      PP     
Sbjct: 380 MQSAPSVSVAD---APAAYAALYAAPPTQVIDAVPQM---QTGLPLAAGAGDVPPLGYAI 433

Query: 477 EDQHGQEKLPFC 512
              HG   L  C
Sbjct: 434 AQLHGIYILAEC 445

>SPL3_ARATH (P93015) Squamosa promoter-binding-like protein 3|
          Length = 131

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
 Frame = -2

Query: 455 LSKYYDGKSQSFACMSEVR-CLEDLPKKRPYNKKMKPCR-----SHVEIDG-DQRAC 306
           L K   GK+ S + + +V  C  D+ K + Y+K+ K C+      HV I G  QR C
Sbjct: 39  LEKKQKGKATSSSGVCQVESCTADMSKAKQYHKRHKVCQFHAKAPHVRISGLHQRFC 95

>SIAH2_MOUSE (Q06986) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia|
           homolog 2) (Siah-2) (mSiah2)
          Length = 325

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
 Frame = +3

Query: 48  ANRPAKKNPHPQGTKKRRE-ASPGQTL*VSTANPPSLLM--AGALVDGDGGRPVEHAGAA 218
           AN+P  K P P  T      A+P     +S A P S  +  A A++ G G      A   
Sbjct: 11  ANKPCSKQPPPPQTPHAPSPAAPPAAATISAAGPGSSAVPAAAAVISGPGAGG--GADPV 68

Query: 219 APRHHQV 239
           +P+HH++
Sbjct: 69  SPQHHEL 75


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,928,138
Number of Sequences: 219361
Number of extensions: 1592208
Number of successful extensions: 5643
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5629
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5424720305
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)