ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal19c11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BT018513.1| Zea mays clone EL01N0430C01.d mRNA sequence 274 4e-70
2gb|AY112090.1| Zea mays CL7841_1 mRNA sequence 270 6e-69
3gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome... 262 1e-66
4dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 262 1e-66
5dbj|AK101630.1| Oryza sativa (japonica cultivar-group) cDNA clon... 262 1e-66
6dbj|AK059362.1| Oryza sativa (japonica cultivar-group) cDNA clon... 262 1e-66
7ref|NM_190417.1| Oryza sativa (japonica cultivar-group), predic... 64 7e-07
8dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 64 7e-07
9dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic D... 64 7e-07
10dbj|AK111814.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 7e-07
11gb|AC092795.2| Homo sapiens chromosome 3 clone RP11-9J18, comple... 50 0.010
12gb|AC008802.7| Homo sapiens chromosome 5 clone CTD-2073O6, compl... 44 0.62
13gb|AC147122.2| Mus musculus BAC clone RP24-163F9 from chromosome... 42 2.5
14gb|AC131722.4| Mus musculus BAC clone RP23-143M5 from chromosome... 42 2.5
15gb|DQ400445.1| Ictalurus punctatus immunoglobulin heavy chain ge... 42 2.5
16gb|AC098935.2| Homo sapiens chromosome 1 clone RP11-564A8, compl... 42 2.5
17gb|AF402002.1|AF402002 Homo sapiens interleukin 20 (IL20) gene, ... 42 2.5
18gb|AC097480.3| Homo sapiens BAC clone RP11-123O22 from 4, comple... 42 2.5
19ref|XM_630904.1| Dictyostelium discoideum hypothetical protein (... 40 9.7
20gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 40 9.7
21gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete... 40 9.7
22gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome 40 9.7
23gb|AC125230.4| Homo sapiens BAC clone RP11-1204M14 from 4, compl... 40 9.7
24ref|XM_947454.1| Theileria annulata strain Ankara N-ethylmaleimi... 40 9.7
25gb|CP000001.1| Bacillus cereus E33L, complete genome 40 9.7
26emb|Z80107.2|HS197J16 Human DNA sequence from clone RP1-197J16 o... 40 9.7
27emb|AL356114.12| Human DNA sequence from clone RP11-257I14 on ch... 40 9.7
28emb|AL021978.1|HS147M19 Human DNA sequence from clone RP1-147M19... 40 9.7
29ref|XM_774885.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 9.7
30emb|BX569693.1| Synechococcus sp. WH8102 complete genome; segmen... 40 9.7
31emb|AL672175.7| Mouse DNA sequence from clone RP23-205A9 on chro... 40 9.7
32gb|AC134919.3| Homo sapiens BAC clone RP13-485B10 from 4, comple... 40 9.7
33gb|AC112695.3| Homo sapiens BAC clone RP11-9B6 from 4, complete ... 40 9.7
34gb|AC016700.8| Homo sapiens BAC clone RP11-175A7 from 2, complet... 40 9.7
35emb|BX649525.14| Zebrafish DNA sequence from clone CH211-85E10 i... 40 9.7
36gb|AE016879.1| Bacillus anthracis str. Ames, complete genome 40 9.7
37gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome 40 9.7

>gb|BT018513.1| Zea mays clone EL01N0430C01.d mRNA sequence
          Length = 1245

 Score =  274 bits (138), Expect = 4e-70
 Identities = 327/390 (83%)
 Strand = Plus / Minus

                                                                       
Query: 321 atcactttgctgctccttcaaacaagtgctggatatgtgcctcgacatcttctggggtgt 380
           |||||||||||||||||||||||||||||||||| || ||  | ||||| ||||||||||
Sbjct: 942 atcactttgctgctccttcaaacaagtgctggatgtgggctacaacatcctctggggtgt 883

                                                                       
Query: 381 acttgatgtacaagtcacgtccggtttctggagctgattttaacctggcaatcaaagccg 440
           | ||||||||||| ||||| || ||||| ||||  || |||||| ||||||| ||||  |
Sbjct: 882 atttgatgtacaaatcacgcccagtttcaggagaagactttaacttggcaattaaagagg 823

                                                                       
Query: 441 catatgctggcattactgaatcctccactgctgacctaacgtccattcgcaactgatcat 500
           | ||  ||||||| ||||  |||||||| |||| ||||| ||| |     | ||| ||||
Sbjct: 822 cgtaaactggcatcactgtctcctccaccgctgccctaatgtcaacctttagctggtcat 763

                                                                       
Query: 501 cggctaccatccattctgattgtactgcatagatctcctcaaagtaggtattaaacatcc 560
           | |||| || ||||||||| ||| | ||||||||||||||||| || ||||||||||| |
Sbjct: 762 ctgctatcacccattctgactgtgccgcatagatctcctcaaaatatgtattaaacattc 703

                                                                       
Query: 561 gcaatttctgcagcattgccttggctgggagtgcaccaacgcctgaaccaccaatctgca 620
           ||| |||||||||||||||||||||||||||| |||||| ||||| |   ||| | ||||
Sbjct: 702 gcagtttctgcagcattgccttggctgggagtccaccaatgcctggagtgccactttgca 643

                                                                       
Query: 621 gcacggttgtaaccttgccccatgttgaacgctgataatccatgctccagcgacgcactc 680
           |||| ||||||||||||||||||||||  ||||||||||||||||||||||| || ||||
Sbjct: 642 gcacagttgtaaccttgccccatgttgcccgctgataatccatgctccagcgtcgaactc 583

                                         
Query: 681 tagttgacaactgcttgatccagtcatcgc 710
           || ||| || |||||| ||||| |||||||
Sbjct: 582 tatttgtcatctgctttatccactcatcgc 553



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>gb|AY112090.1| Zea mays CL7841_1 mRNA sequence
          Length = 834

 Score =  270 bits (136), Expect = 6e-69
 Identities = 325/388 (83%)
 Strand = Plus / Plus

                                                                       
Query: 321 atcactttgctgctccttcaaacaagtgctggatatgtgcctcgacatcttctggggtgt 380
           ||||||||||||||||||||||||||||||||||||| ||  | ||||| ||||| ||||
Sbjct: 313 atcactttgctgctccttcaaacaagtgctggatatgggctacaacatcctctggagtgt 372

                                                                       
Query: 381 acttgatgtacaagtcacgtccggtttctggagctgattttaacctggcaatcaaagccg 440
           | ||||||||||| || || || ||||| ||||  || || ||| ||||||| ||||  |
Sbjct: 373 atttgatgtacaaatcccgcccagtttcaggagaagacttcaacttggcaattaaagagg 432

                                                                       
Query: 441 catatgctggcattactgaatcctccactgctgacctaacgtccattcgcaactgatcat 500
           | ||  ||||||| ||||  ||||||||||||| ||||| |||||  |  | ||| ||||
Sbjct: 433 cgtaaactggcatcactgtctcctccactgctgccctaatgtccacccttagctggtcat 492

                                                                       
Query: 501 cggctaccatccattctgattgtactgcatagatctcctcaaagtaggtattaaacatcc 560
           | |||| || |||||| || ||| | ||||| |||||||||||||| ||||||||||| |
Sbjct: 493 ctgctatcacccattccgactgtgccgcatatatctcctcaaagtacgtattaaacattc 552

                                                                       
Query: 561 gcaatttctgcagcattgccttggctgggagtgcaccaacgcctgaaccaccaatctgca 620
           ||| |||||||||||||||||||||||||||| |||||| ||||| |   ||| | ||||
Sbjct: 553 gcagtttctgcagcattgccttggctgggagtccaccaatgcctggagtgccactttgca 612

                                                                       
Query: 621 gcacggttgtaaccttgccccatgttgaacgctgataatccatgctccagcgacgcactc 680
           |||| ||||||||||||||||||||||  ||||||||||||||||||||||| || ||||
Sbjct: 613 gcacagttgtaaccttgccccatgttgcccgctgataatccatgctccagcgtcgaactc 672

                                       
Query: 681 tagttgacaactgcttgatccagtcatc 708
           || ||| || |||||| ||||| |||||
Sbjct: 673 tatttgtcatctgctttatccactcatc 700



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>gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0486C01,
             complete sequence
          Length = 146432

 Score =  262 bits (132), Expect = 1e-66
 Identities = 330/396 (83%)
 Strand = Plus / Plus

                                                                         
Query: 307   gtactgattaagtgatcactttgctgctccttcaaacaagtgctggatatgtgcctcgac 366
             |||||||| || ||||||||| ||||||||||||||||||||||||||   |||||| ||
Sbjct: 41912 gtactgatcaactgatcacttagctgctccttcaaacaagtgctggatgcatgcctcaac 41971

                                                                         
Query: 367   atcttctggggtgtacttgatgtacaagtcacgtccggtttctggagctgattttaacct 426
             ||||||||||||||| ||||||||||||||| | | || ||| || | |||||| || ||
Sbjct: 41972 atcttctggggtgtatttgatgtacaagtcatgcctggcttcgggggatgatttcaatct 42031

                                                                         
Query: 427   ggcaatcaaagccgcatatgctggcattactgaatcctccactgctgacctaacgtccat 486
              | |||||| || | |||| |||||||||| |  ||| ||||||||| |||||| |||| 
Sbjct: 42032 agaaatcaaggctgtatatactggcattacagcttccgccactgctgccctaacatccac 42091

                                                                         
Query: 487   tcgcaactgatcatcggctaccatccattctgattgtactgcatagatctcctcaaagta 546
              |||| ||| ||||| |||| || |||||||||||||||| |||||||||||| ||||||
Sbjct: 42092 ccgcagctgttcatctgctatcacccattctgattgtacttcatagatctcctgaaagta 42151

                                                                         
Query: 547   ggtattaaacatccgcaatttctgcagcattgccttggctgggagtgcaccaacgcctga 606
             ||||||||||||||| | |||||||  ||||||| |||| |||||| |||| || || | 
Sbjct: 42152 ggtattaaacatccggagtttctgcttcattgccgtggcagggagtccacctactccagg 42211

                                                                         
Query: 607   accaccaatctgcagcacggttgtaaccttgccccatgttgaacgctgataatccatgct 666
             ||| ||| ||||||  || ||||| |||||||||||||||   ||||| |||||||||||
Sbjct: 42212 accgccagtctgcaatactgttgtgaccttgccccatgttacccgctggtaatccatgct 42271

                                                 
Query: 667   ccagcgacgcactctagttgacaactgcttgatcca 702
             ||| || ||||||||  ||| ||  |||||||||||
Sbjct: 42272 ccaacgccgcactctgtttgtcatttgcttgatcca 42307



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 158   atttcttcatggaggacaacatacaaa 184
             ||||||||||||||||||| |||||||
Sbjct: 41757 atttcttcatggaggacaaaatacaaa 41783



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  262 bits (132), Expect = 1e-66
 Identities = 330/396 (83%)
 Strand = Plus / Plus

                                                                            
Query: 307      gtactgattaagtgatcactttgctgctccttcaaacaagtgctggatatgtgcctcgac 366
                |||||||| || ||||||||| ||||||||||||||||||||||||||   |||||| ||
Sbjct: 23110137 gtactgatcaactgatcacttagctgctccttcaaacaagtgctggatgcatgcctcaac 23110196

                                                                            
Query: 367      atcttctggggtgtacttgatgtacaagtcacgtccggtttctggagctgattttaacct 426
                ||||||||||||||| ||||||||||||||| | | || ||| || | |||||| || ||
Sbjct: 23110197 atcttctggggtgtatttgatgtacaagtcatgcctggcttcgggggatgatttcaatct 23110256

                                                                            
Query: 427      ggcaatcaaagccgcatatgctggcattactgaatcctccactgctgacctaacgtccat 486
                 | |||||| || | |||| |||||||||| |  ||| ||||||||| |||||| |||| 
Sbjct: 23110257 agaaatcaaggctgtatatactggcattacagcttccgccactgctgccctaacatccac 23110316

                                                                            
Query: 487      tcgcaactgatcatcggctaccatccattctgattgtactgcatagatctcctcaaagta 546
                 |||| ||| ||||| |||| || |||||||||||||||| |||||||||||| ||||||
Sbjct: 23110317 ccgcagctgttcatctgctatcacccattctgattgtacttcatagatctcctgaaagta 23110376

                                                                            
Query: 547      ggtattaaacatccgcaatttctgcagcattgccttggctgggagtgcaccaacgcctga 606
                ||||||||||||||| | |||||||  ||||||| |||| |||||| |||| || || | 
Sbjct: 23110377 ggtattaaacatccggagtttctgcttcattgccgtggcagggagtccacctactccagg 23110436

                                                                            
Query: 607      accaccaatctgcagcacggttgtaaccttgccccatgttgaacgctgataatccatgct 666
                ||| ||| ||||||  || ||||| |||||||||||||||   ||||| |||||||||||
Sbjct: 23110437 accgccagtctgcaatactgttgtgaccttgccccatgttacccgctggtaatccatgct 23110496

                                                    
Query: 667      ccagcgacgcactctagttgacaactgcttgatcca 702
                ||| || ||||||||  ||| ||  |||||||||||
Sbjct: 23110497 ccaacgccgcactctgtttgtcatttgcttgatcca 23110532



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 158      atttcttcatggaggacaacatacaaa 184
                ||||||||||||||||||| |||||||
Sbjct: 23109982 atttcttcatggaggacaaaatacaaa 23110008



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>dbj|AK101630.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033054N12, full
            insert sequence
          Length = 2314

 Score =  262 bits (132), Expect = 1e-66
 Identities = 330/396 (83%)
 Strand = Plus / Minus

                                                                        
Query: 307  gtactgattaagtgatcactttgctgctccttcaaacaagtgctggatatgtgcctcgac 366
            |||||||| || ||||||||| ||||||||||||||||||||||||||   |||||| ||
Sbjct: 1980 gtactgatcaactgatcacttagctgctccttcaaacaagtgctggatgcatgcctcaac 1921

                                                                        
Query: 367  atcttctggggtgtacttgatgtacaagtcacgtccggtttctggagctgattttaacct 426
            ||||||||||||||| ||||||||||||||| | | || ||| || | |||||| || ||
Sbjct: 1920 atcttctggggtgtatttgatgtacaagtcatgcctggcttcgggggatgatttcaatct 1861

                                                                        
Query: 427  ggcaatcaaagccgcatatgctggcattactgaatcctccactgctgacctaacgtccat 486
             | |||||| || | |||| |||||||||| |  ||| ||||||||| |||||| |||| 
Sbjct: 1860 agaaatcaaggctgtatatactggcattacagcttccgccactgctgccctaacatccac 1801

                                                                        
Query: 487  tcgcaactgatcatcggctaccatccattctgattgtactgcatagatctcctcaaagta 546
             |||| ||| ||||| |||| || |||||||||||||||| |||||||||||| ||||||
Sbjct: 1800 ccgcagctgttcatctgctatcacccattctgattgtacttcatagatctcctgaaagta 1741

                                                                        
Query: 547  ggtattaaacatccgcaatttctgcagcattgccttggctgggagtgcaccaacgcctga 606
            ||||||||||||||| | |||||||  ||||||| |||| |||||| |||| || || | 
Sbjct: 1740 ggtattaaacatccggagtttctgcttcattgccgtggcagggagtccacctactccagg 1681

                                                                        
Query: 607  accaccaatctgcagcacggttgtaaccttgccccatgttgaacgctgataatccatgct 666
            ||| ||| ||||||  || ||||| |||||||||||||||   ||||| |||||||||||
Sbjct: 1680 accgccagtctgcaatactgttgtgaccttgccccatgttacccgctggtaatccatgct 1621

                                                
Query: 667  ccagcgacgcactctagttgacaactgcttgatcca 702
            ||| || ||||||||  ||| ||  |||||||||||
Sbjct: 1620 ccaacgccgcactctgtttgtcatttgcttgatcca 1585



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 158  atttcttcatggaggacaacatacaaa 184
            ||||||||||||||||||| |||||||
Sbjct: 2135 atttcttcatggaggacaaaatacaaa 2109



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>dbj|AK059362.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-E02, full
            insert sequence
          Length = 1302

 Score =  262 bits (132), Expect = 1e-66
 Identities = 330/396 (83%)
 Strand = Plus / Minus

                                                                        
Query: 307  gtactgattaagtgatcactttgctgctccttcaaacaagtgctggatatgtgcctcgac 366
            |||||||| || ||||||||| ||||||||||||||||||||||||||   |||||| ||
Sbjct: 1022 gtactgatcaactgatcacttagctgctccttcaaacaagtgctggatgcatgcctcaac 963

                                                                        
Query: 367  atcttctggggtgtacttgatgtacaagtcacgtccggtttctggagctgattttaacct 426
            ||||||||||||||| ||||||||||||||| | | || ||| || | |||||| || ||
Sbjct: 962  atcttctggggtgtatttgatgtacaagtcatgcctggcttcgggggatgatttcaatct 903

                                                                        
Query: 427  ggcaatcaaagccgcatatgctggcattactgaatcctccactgctgacctaacgtccat 486
             | |||||| || | |||| |||||||||| |  ||| ||||||||| |||||| |||| 
Sbjct: 902  agaaatcaaggctgtatatactggcattacagcttccgccactgctgccctaacatccac 843

                                                                        
Query: 487  tcgcaactgatcatcggctaccatccattctgattgtactgcatagatctcctcaaagta 546
             |||| ||| ||||| |||| || |||||||||||||||| |||||||||||| ||||||
Sbjct: 842  ccgcagctgttcatctgctatcacccattctgattgtacttcatagatctcctgaaagta 783

                                                                        
Query: 547  ggtattaaacatccgcaatttctgcagcattgccttggctgggagtgcaccaacgcctga 606
            ||||||||||||||| | |||||||  ||||||| |||| |||||| |||| || || | 
Sbjct: 782  ggtattaaacatccggagtttctgcttcattgccgtggcagggagtccacctactccagg 723

                                                                        
Query: 607  accaccaatctgcagcacggttgtaaccttgccccatgttgaacgctgataatccatgct 666
            ||| ||| ||||||  || ||||| |||||||||||||||   ||||| |||||||||||
Sbjct: 722  accgccagtctgcaatactgttgtgaccttgccccatgttacccgctggtaatccatgct 663

                                                
Query: 667  ccagcgacgcactctagttgacaactgcttgatcca 702
            ||| || ||||||||  ||| ||  |||||||||||
Sbjct: 662  ccaacgccgcactctgtttgtcatttgcttgatcca 627



 Score = 44.1 bits (22), Expect = 0.62
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 159  tttcttcatggaggacaacatacaaa 184
            |||||||||||||||||| |||||||
Sbjct: 1176 tttcttcatggaggacaaaatacaaa 1151



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>ref|NM_190417.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1959

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                        
Query: 333  ctccttcaaacaagtgctggatatgtgcctcgacatcttctggggtgtacttgatgtaca 392
            |||||||||||| |||||||||  |||| ||||||||||||||||  | ||||||| |||
Sbjct: 1948 ctccttcaaacaggtgctggattcgtgcttcgacatcttctggggaatgcttgatgaaca 1889

                
Query: 393  agtc 396
            ||||
Sbjct: 1888 agtc 1885



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                            
Query: 333      ctccttcaaacaagtgctggatatgtgcctcgacatcttctggggtgtacttgatgtaca 392
                |||||||||||| |||||||||  |||| ||||||||||||||||  | ||||||| |||
Sbjct: 35404694 ctccttcaaacaggtgctggattcgtgcttcgacatcttctggggaatgcttgatgaaca 35404635

                    
Query: 393      agtc 396
                ||||
Sbjct: 35404634 agtc 35404631



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>dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1088C09
          Length = 154084

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                         
Query: 333   ctccttcaaacaagtgctggatatgtgcctcgacatcttctggggtgtacttgatgtaca 392
             |||||||||||| |||||||||  |||| ||||||||||||||||  | ||||||| |||
Sbjct: 28643 ctccttcaaacaggtgctggattcgtgcttcgacatcttctggggaatgcttgatgaaca 28584

                 
Query: 393   agtc 396
             ||||
Sbjct: 28583 agtc 28580



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>dbj|AK111814.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013133L14, full
            insert sequence
          Length = 2390

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                        
Query: 333  ctccttcaaacaagtgctggatatgtgcctcgacatcttctggggtgtacttgatgtaca 392
            |||||||||||| |||||||||  |||| ||||||||||||||||  | ||||||| |||
Sbjct: 2146 ctccttcaaacaggtgctggattcgtgcttcgacatcttctggggaatgcttgatgaaca 2087

                
Query: 393  agtc 396
            ||||
Sbjct: 2086 agtc 2083



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>gb|AC092795.2| Homo sapiens chromosome 3 clone RP11-9J18, complete sequence
          Length = 142517

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 314   ttaagtgatcactttgctgctcctt 338
             |||||||||||||||||||||||||
Sbjct: 79837 ttaagtgatcactttgctgctcctt 79861



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>gb|AC008802.7| Homo sapiens chromosome 5 clone CTD-2073O6, complete sequence
          Length = 92418

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 573   gcattgccttggctgggagtgc 594
             ||||||||||||||||||||||
Sbjct: 77116 gcattgccttggctgggagtgc 77095



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>gb|AC147122.2| Mus musculus BAC clone RP24-163F9 from chromosome 9, complete sequence
          Length = 153867

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 256   ccagcaacttcacaaacccaaagaa 280
             ||||||| |||||||||||||||||
Sbjct: 26563 ccagcaaattcacaaacccaaagaa 26587



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>gb|AC131722.4| Mus musculus BAC clone RP23-143M5 from chromosome 9, complete sequence
          Length = 228144

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 256   ccagcaacttcacaaacccaaagaa 280
             ||||||| |||||||||||||||||
Sbjct: 10513 ccagcaaattcacaaacccaaagaa 10489



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>gb|DQ400445.1| Ictalurus punctatus immunoglobulin heavy chain gene locus, partial
              sequence and unknown gene
          Length = 257153

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 305    aggtactgattaagtgatcac 325
              |||||||||||||||||||||
Sbjct: 199069 aggtactgattaagtgatcac 199089



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>gb|AC098935.2| Homo sapiens chromosome 1 clone RP11-564A8, complete sequence
          Length = 192565

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 271   acccaaagaataatagattat 291
             |||||||||||||||||||||
Sbjct: 19403 acccaaagaataatagattat 19383



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>gb|AF402002.1|AF402002 Homo sapiens interleukin 20 (IL20) gene, complete cds
          Length = 6634

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 271  acccaaagaataatagattat 291
            |||||||||||||||||||||
Sbjct: 3841 acccaaagaataatagattat 3821



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>gb|AC097480.3| Homo sapiens BAC clone RP11-123O22 from 4, complete sequence
          Length = 168994

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 308   tactgattaagtgatcactttgctg 332
             |||||||||| ||||||||||||||
Sbjct: 94015 tactgattaaatgatcactttgctg 93991



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>ref|XM_630904.1| Dictyostelium discoideum hypothetical protein (DDB0219507), partial
            mRNA
          Length = 5832

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 275  aaagaataatagattatcaa 294
            ||||||||||||||||||||
Sbjct: 3426 aaagaataatagattatcaa 3445



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>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 175     aacatacaaatgatacagca 194
               ||||||||||||||||||||
Sbjct: 4080811 aacatacaaatgatacagca 4080830



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>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 175     aacatacaaatgatacagca 194
               ||||||||||||||||||||
Sbjct: 4092961 aacatacaaatgatacagca 4092980



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>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 175     aacatacaaatgatacagca 194
               ||||||||||||||||||||
Sbjct: 4093334 aacatacaaatgatacagca 4093353



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>gb|AC125230.4| Homo sapiens BAC clone RP11-1204M14 from 4, complete sequence
          Length = 23447

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 108  acacacaactagacaatcat 127
            ||||||||||||||||||||
Sbjct: 4542 acacacaactagacaatcat 4561



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>ref|XM_947454.1| Theileria annulata strain Ankara N-ethylmaleimide-sensitive factor
           (TA11700) partial mRNA
          Length = 2136

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 419 tttaacctggcaatcaaagc 438
           ||||||||||||||||||||
Sbjct: 394 tttaacctggcaatcaaagc 413



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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 175     aacatacaaatgatacagca 194
               ||||||||||||||||||||
Sbjct: 4135026 aacatacaaatgatacagca 4135045



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>emb|Z80107.2|HS197J16 Human DNA sequence from clone RP1-197J16 on chromosome X Contains a
             histone H2B family pseudogene, a novel pseudogene and a
             NADH dehydrogenase 6 (MTND6) pseudogene, complete sequence
          Length = 110715

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    ttcttacaaaataatcagct 94
             ||||||||||||||||||||
Sbjct: 18793 ttcttacaaaataatcagct 18774



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>emb|AL356114.12| Human DNA sequence from clone RP11-257I14 on chromosome 10 Contains
             part of the PCDH15 gene for protocadherin 15 and the 3'
             end of a novel gene, complete sequence
          Length = 124856

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 321   atcactttgctgctccttca 340
             ||||||||||||||||||||
Sbjct: 32479 atcactttgctgctccttca 32498



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>emb|AL021978.1|HS147M19 Human DNA sequence from clone RP1-147M19 on chromosome 6p22.1-22.3
             Contains the 3' end of the DTNBP1 gene for dystobrevin
             binding protein 1, complete sequence
          Length = 73087

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    tacttttcttacaaaataat 89
             ||||||||||||||||||||
Sbjct: 42823 tacttttcttacaaaataat 42842



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>ref|XM_774885.1| PREDICTED: Strongylocentrotus purpuratus similar to exocyst complex
            component 7 isoform a (LOC574569), mRNA
          Length = 2046

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 371  tctggggtgtacttgatgta 390
            ||||||||||||||||||||
Sbjct: 2006 tctggggtgtacttgatgta 1987



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>emb|BX569693.1| Synechococcus sp. WH8102 complete genome; segment 5/7
          Length = 349213

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 557    atccgcaatttctgcagcattgcc 580
              |||||||||||||||| |||||||
Sbjct: 230072 atccgcaatttctgcatcattgcc 230049



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>emb|AL672175.7| Mouse DNA sequence from clone RP23-205A9 on chromosome 11 Contains the
             Nog gene for noggin, the 3' end of the gene for a novel
             protein (4932411E22Rik) and one CpG island, complete
             sequence
          Length = 212341

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 149   aactccataatttcttcatg 168
             ||||||||||||||||||||
Sbjct: 22034 aactccataatttcttcatg 22015



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>gb|AC134919.3| Homo sapiens BAC clone RP13-485B10 from 4, complete sequence
          Length = 145992

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 108   acacacaactagacaatcat 127
             ||||||||||||||||||||
Sbjct: 93557 acacacaactagacaatcat 93576



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>gb|AC112695.3| Homo sapiens BAC clone RP11-9B6 from 4, complete sequence
          Length = 109860

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   gatacagcaatacaaggttg 205
             ||||||||||||||||||||
Sbjct: 80252 gatacagcaatacaaggttg 80233



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>gb|AC016700.8| Homo sapiens BAC clone RP11-175A7 from 2, complete sequence
          Length = 177995

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 71    acttttcttacaaaataatcagct 94
             |||||||||||||||||| |||||
Sbjct: 86048 acttttcttacaaaataaacagct 86071



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>emb|BX649525.14| Zebrafish DNA sequence from clone CH211-85E10 in linkage group 22,
             complete sequence
          Length = 180584

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   caatcataagcatgtacacc 140
             ||||||||||||||||||||
Sbjct: 45547 caatcataagcatgtacacc 45566



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>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 175     aacatacaaatgatacagca 194
               ||||||||||||||||||||
Sbjct: 4092834 aacatacaaatgatacagca 4092853



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>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 175     aacatacaaatgatacagca 194
               ||||||||||||||||||||
Sbjct: 4041453 aacatacaaatgatacagca 4041472


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,122,459
Number of Sequences: 3902068
Number of extensions: 6122459
Number of successful extensions: 102657
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102308
Number of HSP's gapped (non-prelim): 342
length of query: 710
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 687
effective length of database: 17,143,297,704
effective search space: 11777445522648
effective search space used: 11777445522648
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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