| Clone Name | rbaal19c11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT018513.1| Zea mays clone EL01N0430C01.d mRNA sequence Length = 1245 Score = 274 bits (138), Expect = 4e-70 Identities = 327/390 (83%) Strand = Plus / Minus Query: 321 atcactttgctgctccttcaaacaagtgctggatatgtgcctcgacatcttctggggtgt 380 |||||||||||||||||||||||||||||||||| || || | ||||| |||||||||| Sbjct: 942 atcactttgctgctccttcaaacaagtgctggatgtgggctacaacatcctctggggtgt 883 Query: 381 acttgatgtacaagtcacgtccggtttctggagctgattttaacctggcaatcaaagccg 440 | ||||||||||| ||||| || ||||| |||| || |||||| ||||||| |||| | Sbjct: 882 atttgatgtacaaatcacgcccagtttcaggagaagactttaacttggcaattaaagagg 823 Query: 441 catatgctggcattactgaatcctccactgctgacctaacgtccattcgcaactgatcat 500 | || ||||||| |||| |||||||| |||| ||||| ||| | | ||| |||| Sbjct: 822 cgtaaactggcatcactgtctcctccaccgctgccctaatgtcaacctttagctggtcat 763 Query: 501 cggctaccatccattctgattgtactgcatagatctcctcaaagtaggtattaaacatcc 560 | |||| || ||||||||| ||| | ||||||||||||||||| || ||||||||||| | Sbjct: 762 ctgctatcacccattctgactgtgccgcatagatctcctcaaaatatgtattaaacattc 703 Query: 561 gcaatttctgcagcattgccttggctgggagtgcaccaacgcctgaaccaccaatctgca 620 ||| |||||||||||||||||||||||||||| |||||| ||||| | ||| | |||| Sbjct: 702 gcagtttctgcagcattgccttggctgggagtccaccaatgcctggagtgccactttgca 643 Query: 621 gcacggttgtaaccttgccccatgttgaacgctgataatccatgctccagcgacgcactc 680 |||| |||||||||||||||||||||| ||||||||||||||||||||||| || |||| Sbjct: 642 gcacagttgtaaccttgccccatgttgcccgctgataatccatgctccagcgtcgaactc 583 Query: 681 tagttgacaactgcttgatccagtcatcgc 710 || ||| || |||||| ||||| ||||||| Sbjct: 582 tatttgtcatctgctttatccactcatcgc 553
>gb|AY112090.1| Zea mays CL7841_1 mRNA sequence Length = 834 Score = 270 bits (136), Expect = 6e-69 Identities = 325/388 (83%) Strand = Plus / Plus Query: 321 atcactttgctgctccttcaaacaagtgctggatatgtgcctcgacatcttctggggtgt 380 ||||||||||||||||||||||||||||||||||||| || | ||||| ||||| |||| Sbjct: 313 atcactttgctgctccttcaaacaagtgctggatatgggctacaacatcctctggagtgt 372 Query: 381 acttgatgtacaagtcacgtccggtttctggagctgattttaacctggcaatcaaagccg 440 | ||||||||||| || || || ||||| |||| || || ||| ||||||| |||| | Sbjct: 373 atttgatgtacaaatcccgcccagtttcaggagaagacttcaacttggcaattaaagagg 432 Query: 441 catatgctggcattactgaatcctccactgctgacctaacgtccattcgcaactgatcat 500 | || ||||||| |||| ||||||||||||| ||||| ||||| | | ||| |||| Sbjct: 433 cgtaaactggcatcactgtctcctccactgctgccctaatgtccacccttagctggtcat 492 Query: 501 cggctaccatccattctgattgtactgcatagatctcctcaaagtaggtattaaacatcc 560 | |||| || |||||| || ||| | ||||| |||||||||||||| ||||||||||| | Sbjct: 493 ctgctatcacccattccgactgtgccgcatatatctcctcaaagtacgtattaaacattc 552 Query: 561 gcaatttctgcagcattgccttggctgggagtgcaccaacgcctgaaccaccaatctgca 620 ||| |||||||||||||||||||||||||||| |||||| ||||| | ||| | |||| Sbjct: 553 gcagtttctgcagcattgccttggctgggagtccaccaatgcctggagtgccactttgca 612 Query: 621 gcacggttgtaaccttgccccatgttgaacgctgataatccatgctccagcgacgcactc 680 |||| |||||||||||||||||||||| ||||||||||||||||||||||| || |||| Sbjct: 613 gcacagttgtaaccttgccccatgttgcccgctgataatccatgctccagcgtcgaactc 672 Query: 681 tagttgacaactgcttgatccagtcatc 708 || ||| || |||||| ||||| ||||| Sbjct: 673 tatttgtcatctgctttatccactcatc 700
>gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0486C01, complete sequence Length = 146432 Score = 262 bits (132), Expect = 1e-66 Identities = 330/396 (83%) Strand = Plus / Plus Query: 307 gtactgattaagtgatcactttgctgctccttcaaacaagtgctggatatgtgcctcgac 366 |||||||| || ||||||||| |||||||||||||||||||||||||| |||||| || Sbjct: 41912 gtactgatcaactgatcacttagctgctccttcaaacaagtgctggatgcatgcctcaac 41971 Query: 367 atcttctggggtgtacttgatgtacaagtcacgtccggtttctggagctgattttaacct 426 ||||||||||||||| ||||||||||||||| | | || ||| || | |||||| || || Sbjct: 41972 atcttctggggtgtatttgatgtacaagtcatgcctggcttcgggggatgatttcaatct 42031 Query: 427 ggcaatcaaagccgcatatgctggcattactgaatcctccactgctgacctaacgtccat 486 | |||||| || | |||| |||||||||| | ||| ||||||||| |||||| |||| Sbjct: 42032 agaaatcaaggctgtatatactggcattacagcttccgccactgctgccctaacatccac 42091 Query: 487 tcgcaactgatcatcggctaccatccattctgattgtactgcatagatctcctcaaagta 546 |||| ||| ||||| |||| || |||||||||||||||| |||||||||||| |||||| Sbjct: 42092 ccgcagctgttcatctgctatcacccattctgattgtacttcatagatctcctgaaagta 42151 Query: 547 ggtattaaacatccgcaatttctgcagcattgccttggctgggagtgcaccaacgcctga 606 ||||||||||||||| | ||||||| ||||||| |||| |||||| |||| || || | Sbjct: 42152 ggtattaaacatccggagtttctgcttcattgccgtggcagggagtccacctactccagg 42211 Query: 607 accaccaatctgcagcacggttgtaaccttgccccatgttgaacgctgataatccatgct 666 ||| ||| |||||| || ||||| ||||||||||||||| ||||| ||||||||||| Sbjct: 42212 accgccagtctgcaatactgttgtgaccttgccccatgttacccgctggtaatccatgct 42271 Query: 667 ccagcgacgcactctagttgacaactgcttgatcca 702 ||| || |||||||| ||| || ||||||||||| Sbjct: 42272 ccaacgccgcactctgtttgtcatttgcttgatcca 42307 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Plus Query: 158 atttcttcatggaggacaacatacaaa 184 ||||||||||||||||||| ||||||| Sbjct: 41757 atttcttcatggaggacaaaatacaaa 41783
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 262 bits (132), Expect = 1e-66 Identities = 330/396 (83%) Strand = Plus / Plus Query: 307 gtactgattaagtgatcactttgctgctccttcaaacaagtgctggatatgtgcctcgac 366 |||||||| || ||||||||| |||||||||||||||||||||||||| |||||| || Sbjct: 23110137 gtactgatcaactgatcacttagctgctccttcaaacaagtgctggatgcatgcctcaac 23110196 Query: 367 atcttctggggtgtacttgatgtacaagtcacgtccggtttctggagctgattttaacct 426 ||||||||||||||| ||||||||||||||| | | || ||| || | |||||| || || Sbjct: 23110197 atcttctggggtgtatttgatgtacaagtcatgcctggcttcgggggatgatttcaatct 23110256 Query: 427 ggcaatcaaagccgcatatgctggcattactgaatcctccactgctgacctaacgtccat 486 | |||||| || | |||| |||||||||| | ||| ||||||||| |||||| |||| Sbjct: 23110257 agaaatcaaggctgtatatactggcattacagcttccgccactgctgccctaacatccac 23110316 Query: 487 tcgcaactgatcatcggctaccatccattctgattgtactgcatagatctcctcaaagta 546 |||| ||| ||||| |||| || |||||||||||||||| |||||||||||| |||||| Sbjct: 23110317 ccgcagctgttcatctgctatcacccattctgattgtacttcatagatctcctgaaagta 23110376 Query: 547 ggtattaaacatccgcaatttctgcagcattgccttggctgggagtgcaccaacgcctga 606 ||||||||||||||| | ||||||| ||||||| |||| |||||| |||| || || | Sbjct: 23110377 ggtattaaacatccggagtttctgcttcattgccgtggcagggagtccacctactccagg 23110436 Query: 607 accaccaatctgcagcacggttgtaaccttgccccatgttgaacgctgataatccatgct 666 ||| ||| |||||| || ||||| ||||||||||||||| ||||| ||||||||||| Sbjct: 23110437 accgccagtctgcaatactgttgtgaccttgccccatgttacccgctggtaatccatgct 23110496 Query: 667 ccagcgacgcactctagttgacaactgcttgatcca 702 ||| || |||||||| ||| || ||||||||||| Sbjct: 23110497 ccaacgccgcactctgtttgtcatttgcttgatcca 23110532 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Plus Query: 158 atttcttcatggaggacaacatacaaa 184 ||||||||||||||||||| ||||||| Sbjct: 23109982 atttcttcatggaggacaaaatacaaa 23110008
>dbj|AK101630.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033054N12, full insert sequence Length = 2314 Score = 262 bits (132), Expect = 1e-66 Identities = 330/396 (83%) Strand = Plus / Minus Query: 307 gtactgattaagtgatcactttgctgctccttcaaacaagtgctggatatgtgcctcgac 366 |||||||| || ||||||||| |||||||||||||||||||||||||| |||||| || Sbjct: 1980 gtactgatcaactgatcacttagctgctccttcaaacaagtgctggatgcatgcctcaac 1921 Query: 367 atcttctggggtgtacttgatgtacaagtcacgtccggtttctggagctgattttaacct 426 ||||||||||||||| ||||||||||||||| | | || ||| || | |||||| || || Sbjct: 1920 atcttctggggtgtatttgatgtacaagtcatgcctggcttcgggggatgatttcaatct 1861 Query: 427 ggcaatcaaagccgcatatgctggcattactgaatcctccactgctgacctaacgtccat 486 | |||||| || | |||| |||||||||| | ||| ||||||||| |||||| |||| Sbjct: 1860 agaaatcaaggctgtatatactggcattacagcttccgccactgctgccctaacatccac 1801 Query: 487 tcgcaactgatcatcggctaccatccattctgattgtactgcatagatctcctcaaagta 546 |||| ||| ||||| |||| || |||||||||||||||| |||||||||||| |||||| Sbjct: 1800 ccgcagctgttcatctgctatcacccattctgattgtacttcatagatctcctgaaagta 1741 Query: 547 ggtattaaacatccgcaatttctgcagcattgccttggctgggagtgcaccaacgcctga 606 ||||||||||||||| | ||||||| ||||||| |||| |||||| |||| || || | Sbjct: 1740 ggtattaaacatccggagtttctgcttcattgccgtggcagggagtccacctactccagg 1681 Query: 607 accaccaatctgcagcacggttgtaaccttgccccatgttgaacgctgataatccatgct 666 ||| ||| |||||| || ||||| ||||||||||||||| ||||| ||||||||||| Sbjct: 1680 accgccagtctgcaatactgttgtgaccttgccccatgttacccgctggtaatccatgct 1621 Query: 667 ccagcgacgcactctagttgacaactgcttgatcca 702 ||| || |||||||| ||| || ||||||||||| Sbjct: 1620 ccaacgccgcactctgtttgtcatttgcttgatcca 1585 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 158 atttcttcatggaggacaacatacaaa 184 ||||||||||||||||||| ||||||| Sbjct: 2135 atttcttcatggaggacaaaatacaaa 2109
>dbj|AK059362.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-E02, full insert sequence Length = 1302 Score = 262 bits (132), Expect = 1e-66 Identities = 330/396 (83%) Strand = Plus / Minus Query: 307 gtactgattaagtgatcactttgctgctccttcaaacaagtgctggatatgtgcctcgac 366 |||||||| || ||||||||| |||||||||||||||||||||||||| |||||| || Sbjct: 1022 gtactgatcaactgatcacttagctgctccttcaaacaagtgctggatgcatgcctcaac 963 Query: 367 atcttctggggtgtacttgatgtacaagtcacgtccggtttctggagctgattttaacct 426 ||||||||||||||| ||||||||||||||| | | || ||| || | |||||| || || Sbjct: 962 atcttctggggtgtatttgatgtacaagtcatgcctggcttcgggggatgatttcaatct 903 Query: 427 ggcaatcaaagccgcatatgctggcattactgaatcctccactgctgacctaacgtccat 486 | |||||| || | |||| |||||||||| | ||| ||||||||| |||||| |||| Sbjct: 902 agaaatcaaggctgtatatactggcattacagcttccgccactgctgccctaacatccac 843 Query: 487 tcgcaactgatcatcggctaccatccattctgattgtactgcatagatctcctcaaagta 546 |||| ||| ||||| |||| || |||||||||||||||| |||||||||||| |||||| Sbjct: 842 ccgcagctgttcatctgctatcacccattctgattgtacttcatagatctcctgaaagta 783 Query: 547 ggtattaaacatccgcaatttctgcagcattgccttggctgggagtgcaccaacgcctga 606 ||||||||||||||| | ||||||| ||||||| |||| |||||| |||| || || | Sbjct: 782 ggtattaaacatccggagtttctgcttcattgccgtggcagggagtccacctactccagg 723 Query: 607 accaccaatctgcagcacggttgtaaccttgccccatgttgaacgctgataatccatgct 666 ||| ||| |||||| || ||||| ||||||||||||||| ||||| ||||||||||| Sbjct: 722 accgccagtctgcaatactgttgtgaccttgccccatgttacccgctggtaatccatgct 663 Query: 667 ccagcgacgcactctagttgacaactgcttgatcca 702 ||| || |||||||| ||| || ||||||||||| Sbjct: 662 ccaacgccgcactctgtttgtcatttgcttgatcca 627 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 159 tttcttcatggaggacaacatacaaa 184 |||||||||||||||||| ||||||| Sbjct: 1176 tttcttcatggaggacaaaatacaaa 1151
>ref|NM_190417.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1959 Score = 63.9 bits (32), Expect = 7e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 333 ctccttcaaacaagtgctggatatgtgcctcgacatcttctggggtgtacttgatgtaca 392 |||||||||||| ||||||||| |||| |||||||||||||||| | ||||||| ||| Sbjct: 1948 ctccttcaaacaggtgctggattcgtgcttcgacatcttctggggaatgcttgatgaaca 1889 Query: 393 agtc 396 |||| Sbjct: 1888 agtc 1885
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 63.9 bits (32), Expect = 7e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 333 ctccttcaaacaagtgctggatatgtgcctcgacatcttctggggtgtacttgatgtaca 392 |||||||||||| ||||||||| |||| |||||||||||||||| | ||||||| ||| Sbjct: 35404694 ctccttcaaacaggtgctggattcgtgcttcgacatcttctggggaatgcttgatgaaca 35404635 Query: 393 agtc 396 |||| Sbjct: 35404634 agtc 35404631
>dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1088C09 Length = 154084 Score = 63.9 bits (32), Expect = 7e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 333 ctccttcaaacaagtgctggatatgtgcctcgacatcttctggggtgtacttgatgtaca 392 |||||||||||| ||||||||| |||| |||||||||||||||| | ||||||| ||| Sbjct: 28643 ctccttcaaacaggtgctggattcgtgcttcgacatcttctggggaatgcttgatgaaca 28584 Query: 393 agtc 396 |||| Sbjct: 28583 agtc 28580
>dbj|AK111814.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013133L14, full insert sequence Length = 2390 Score = 63.9 bits (32), Expect = 7e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 333 ctccttcaaacaagtgctggatatgtgcctcgacatcttctggggtgtacttgatgtaca 392 |||||||||||| ||||||||| |||| |||||||||||||||| | ||||||| ||| Sbjct: 2146 ctccttcaaacaggtgctggattcgtgcttcgacatcttctggggaatgcttgatgaaca 2087 Query: 393 agtc 396 |||| Sbjct: 2086 agtc 2083
>gb|AC092795.2| Homo sapiens chromosome 3 clone RP11-9J18, complete sequence Length = 142517 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Plus Query: 314 ttaagtgatcactttgctgctcctt 338 ||||||||||||||||||||||||| Sbjct: 79837 ttaagtgatcactttgctgctcctt 79861
>gb|AC008802.7| Homo sapiens chromosome 5 clone CTD-2073O6, complete sequence Length = 92418 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 573 gcattgccttggctgggagtgc 594 |||||||||||||||||||||| Sbjct: 77116 gcattgccttggctgggagtgc 77095
>gb|AC147122.2| Mus musculus BAC clone RP24-163F9 from chromosome 9, complete sequence Length = 153867 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 256 ccagcaacttcacaaacccaaagaa 280 ||||||| ||||||||||||||||| Sbjct: 26563 ccagcaaattcacaaacccaaagaa 26587
>gb|AC131722.4| Mus musculus BAC clone RP23-143M5 from chromosome 9, complete sequence Length = 228144 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 ccagcaacttcacaaacccaaagaa 280 ||||||| ||||||||||||||||| Sbjct: 10513 ccagcaaattcacaaacccaaagaa 10489
>gb|DQ400445.1| Ictalurus punctatus immunoglobulin heavy chain gene locus, partial sequence and unknown gene Length = 257153 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 aggtactgattaagtgatcac 325 ||||||||||||||||||||| Sbjct: 199069 aggtactgattaagtgatcac 199089
>gb|AC098935.2| Homo sapiens chromosome 1 clone RP11-564A8, complete sequence Length = 192565 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 271 acccaaagaataatagattat 291 ||||||||||||||||||||| Sbjct: 19403 acccaaagaataatagattat 19383
>gb|AF402002.1|AF402002 Homo sapiens interleukin 20 (IL20) gene, complete cds Length = 6634 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 271 acccaaagaataatagattat 291 ||||||||||||||||||||| Sbjct: 3841 acccaaagaataatagattat 3821
>gb|AC097480.3| Homo sapiens BAC clone RP11-123O22 from 4, complete sequence Length = 168994 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 308 tactgattaagtgatcactttgctg 332 |||||||||| |||||||||||||| Sbjct: 94015 tactgattaaatgatcactttgctg 93991
>ref|XM_630904.1| Dictyostelium discoideum hypothetical protein (DDB0219507), partial mRNA Length = 5832 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 aaagaataatagattatcaa 294 |||||||||||||||||||| Sbjct: 3426 aaagaataatagattatcaa 3445
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome Length = 5237682 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 aacatacaaatgatacagca 194 |||||||||||||||||||| Sbjct: 4080811 aacatacaaatgatacagca 4080830
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome Length = 5227419 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 aacatacaaatgatacagca 194 |||||||||||||||||||| Sbjct: 4092961 aacatacaaatgatacagca 4092980
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome Length = 5228663 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 aacatacaaatgatacagca 194 |||||||||||||||||||| Sbjct: 4093334 aacatacaaatgatacagca 4093353
>gb|AC125230.4| Homo sapiens BAC clone RP11-1204M14 from 4, complete sequence Length = 23447 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 acacacaactagacaatcat 127 |||||||||||||||||||| Sbjct: 4542 acacacaactagacaatcat 4561
>ref|XM_947454.1| Theileria annulata strain Ankara N-ethylmaleimide-sensitive factor (TA11700) partial mRNA Length = 2136 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 tttaacctggcaatcaaagc 438 |||||||||||||||||||| Sbjct: 394 tttaacctggcaatcaaagc 413
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 aacatacaaatgatacagca 194 |||||||||||||||||||| Sbjct: 4135026 aacatacaaatgatacagca 4135045
>emb|Z80107.2|HS197J16 Human DNA sequence from clone RP1-197J16 on chromosome X Contains a histone H2B family pseudogene, a novel pseudogene and a NADH dehydrogenase 6 (MTND6) pseudogene, complete sequence Length = 110715 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 ttcttacaaaataatcagct 94 |||||||||||||||||||| Sbjct: 18793 ttcttacaaaataatcagct 18774
>emb|AL356114.12| Human DNA sequence from clone RP11-257I14 on chromosome 10 Contains part of the PCDH15 gene for protocadherin 15 and the 3' end of a novel gene, complete sequence Length = 124856 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 atcactttgctgctccttca 340 |||||||||||||||||||| Sbjct: 32479 atcactttgctgctccttca 32498
>emb|AL021978.1|HS147M19 Human DNA sequence from clone RP1-147M19 on chromosome 6p22.1-22.3 Contains the 3' end of the DTNBP1 gene for dystobrevin binding protein 1, complete sequence Length = 73087 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 tacttttcttacaaaataat 89 |||||||||||||||||||| Sbjct: 42823 tacttttcttacaaaataat 42842
>ref|XM_774885.1| PREDICTED: Strongylocentrotus purpuratus similar to exocyst complex component 7 isoform a (LOC574569), mRNA Length = 2046 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 tctggggtgtacttgatgta 390 |||||||||||||||||||| Sbjct: 2006 tctggggtgtacttgatgta 1987
>emb|BX569693.1| Synechococcus sp. WH8102 complete genome; segment 5/7 Length = 349213 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 557 atccgcaatttctgcagcattgcc 580 |||||||||||||||| ||||||| Sbjct: 230072 atccgcaatttctgcatcattgcc 230049
>emb|AL672175.7| Mouse DNA sequence from clone RP23-205A9 on chromosome 11 Contains the Nog gene for noggin, the 3' end of the gene for a novel protein (4932411E22Rik) and one CpG island, complete sequence Length = 212341 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 aactccataatttcttcatg 168 |||||||||||||||||||| Sbjct: 22034 aactccataatttcttcatg 22015
>gb|AC134919.3| Homo sapiens BAC clone RP13-485B10 from 4, complete sequence Length = 145992 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 acacacaactagacaatcat 127 |||||||||||||||||||| Sbjct: 93557 acacacaactagacaatcat 93576
>gb|AC112695.3| Homo sapiens BAC clone RP11-9B6 from 4, complete sequence Length = 109860 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 gatacagcaatacaaggttg 205 |||||||||||||||||||| Sbjct: 80252 gatacagcaatacaaggttg 80233
>gb|AC016700.8| Homo sapiens BAC clone RP11-175A7 from 2, complete sequence Length = 177995 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 acttttcttacaaaataatcagct 94 |||||||||||||||||| ||||| Sbjct: 86048 acttttcttacaaaataaacagct 86071
>emb|BX649525.14| Zebrafish DNA sequence from clone CH211-85E10 in linkage group 22, complete sequence Length = 180584 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 caatcataagcatgtacacc 140 |||||||||||||||||||| Sbjct: 45547 caatcataagcatgtacacc 45566
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome Length = 5227293 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 aacatacaaatgatacagca 194 |||||||||||||||||||| Sbjct: 4092834 aacatacaaatgatacagca 4092853
>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome Length = 5224283 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 aacatacaaatgatacagca 194 |||||||||||||||||||| Sbjct: 4041453 aacatacaaatgatacagca 4041472 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,122,459 Number of Sequences: 3902068 Number of extensions: 6122459 Number of successful extensions: 102657 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 37 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 102308 Number of HSP's gapped (non-prelim): 342 length of query: 710 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 687 effective length of database: 17,143,297,704 effective search space: 11777445522648 effective search space used: 11777445522648 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)