ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal6o13 |
|---|---|
| Clone Library Name | barley_pub |
>SMG1_CAEBR (Q61CW2) Serine/threonine-protein kinase smg-1 (EC 2.7.11.1)| (Suppressor with morphogenetic effect on genitalia protein 1) Length = 2319 Score = 30.4 bits (67), Expect = 2.6 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 7/64 (10%) Frame = +1 Query: 139 VCTSALHRVCFLQQAPQERRALXXADLXDEQLN-------CCRRLSSI**DSVPNFIEDV 297 VCT+A H V F Q + +DL ++Q + CC +L + S PN + DV Sbjct: 1516 VCTAAPHAVVF-QVVSGAASSTEVSDLEEQQNDDRNRVRACCEQLETKMAQSYPNLVRDV 1574 Query: 298 HLFI 309 F+ Sbjct: 1575 RQFV 1578
>ILVD_HALMA (Q5V545) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)| Length = 575 Score = 30.0 bits (66), Expect = 3.4 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -1 Query: 393 YGKGEHKAVFDTLGPDFDGLSYKMIGASDEQVDV 292 Y K H+A+F +G D + LS MIG ++ D+ Sbjct: 25 YEKAPHRAMFRAMGYDDEDLSSPMIGVANPAADI 58
>SMG1_CAEEL (O01510) Serine/threonine-protein kinase smg-1 (EC 2.7.11.1)| (Suppressor with morphogenetic effect on genitalia protein 1) Length = 2322 Score = 30.0 bits (66), Expect = 3.4 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 7/64 (10%) Frame = +1 Query: 139 VCTSALHRVCFLQQAPQERRALXXADLXDEQLN-------CCRRLSSI**DSVPNFIEDV 297 +CT+A H V F + + +L ++Q + CC +L + S PN ++DV Sbjct: 1517 ICTAAPHAVVFQVVSGAASSSTDGEELEEQQNDDRNRVRACCEKLETNMSQSYPNLVKDV 1576 Query: 298 HLFI 309 F+ Sbjct: 1577 RQFV 1580
>G6PI_BACHK (Q6HC08) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 450 Score = 28.9 bits (63), Expect = 7.6 Identities = 28/98 (28%), Positives = 37/98 (37%), Gaps = 1/98 (1%) Frame = -1 Query: 441 QQVMHKAIQLADAVYKYGKGEHKAVFDTLGPDFDGLSYKMIGASDEQVDVFNEVWYTVLL 262 Q V L + V K GK H+ ++ D DGL+Y + E VD N Y L Sbjct: 316 QYVQEGRRDLFETVLKVGKSTHELTIESEENDLDGLNY----LAGETVDFVNTKAYEGTL 371 Query: 261 NAGETSTAIELLVXQISXXQGA-PFLWRLLEKAYTMEG 151 A L+V + +L EKA M G Sbjct: 372 LAHSDGGVPNLIVNIPELNEYTFGYLVYFFEKACAMSG 409
>G6PI_BACCZ (Q632G4) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 450 Score = 28.9 bits (63), Expect = 7.6 Identities = 28/98 (28%), Positives = 37/98 (37%), Gaps = 1/98 (1%) Frame = -1 Query: 441 QQVMHKAIQLADAVYKYGKGEHKAVFDTLGPDFDGLSYKMIGASDEQVDVFNEVWYTVLL 262 Q V L + V K GK H+ ++ D DGL+Y + E VD N Y L Sbjct: 316 QYVQEGRRDLFETVLKVGKSTHELTIESEENDLDGLNY----LAGETVDFVNTKAYEGTL 371 Query: 261 NAGETSTAIELLVXQISXXQGA-PFLWRLLEKAYTMEG 151 A L+V + +L EKA M G Sbjct: 372 LAHSDGGVPNLIVNIPELNEYTFGYLVYFFEKACAMSG 409
>G6PI_BACCR (Q816G0) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 450 Score = 28.9 bits (63), Expect = 7.6 Identities = 28/98 (28%), Positives = 37/98 (37%), Gaps = 1/98 (1%) Frame = -1 Query: 441 QQVMHKAIQLADAVYKYGKGEHKAVFDTLGPDFDGLSYKMIGASDEQVDVFNEVWYTVLL 262 Q V L + V K GK H+ ++ D DGL+Y + E VD N Y L Sbjct: 316 QYVQEGRRDLFETVLKVGKSTHELTIESEENDLDGLNY----LAGETVDFVNTKAYEGTL 371 Query: 261 NAGETSTAIELLVXQISXXQGA-PFLWRLLEKAYTMEG 151 A L+V + +L EKA M G Sbjct: 372 LAHSDGGVPNLIVNIPELNEYTFGYLVYFFEKACAMSG 409
>G6PI_BACAN (Q81K75) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 450 Score = 28.9 bits (63), Expect = 7.6 Identities = 28/98 (28%), Positives = 37/98 (37%), Gaps = 1/98 (1%) Frame = -1 Query: 441 QQVMHKAIQLADAVYKYGKGEHKAVFDTLGPDFDGLSYKMIGASDEQVDVFNEVWYTVLL 262 Q V L + V K GK H+ ++ D DGL+Y + E VD N Y L Sbjct: 316 QYVQEGRRDLFETVLKVGKSTHELTIESEENDLDGLNY----LAGETVDFVNTKAYEGTL 371 Query: 261 NAGETSTAIELLVXQISXXQGA-PFLWRLLEKAYTMEG 151 A L+V + +L EKA M G Sbjct: 372 LAHSDGGVPNLIVNIPELNEYTFGYLVYFFEKACAMSG 409
>HAL9_YEAST (Q12180) Halotolerance protein 9| Length = 1030 Score = 28.5 bits (62), Expect = 9.9 Identities = 14/42 (33%), Positives = 24/42 (57%) Frame = -1 Query: 387 KGEHKAVFDTLGPDFDGLSYKMIGASDEQVDVFNEVWYTVLL 262 KGE K + D L +D +++G +DEQ+ N W T+++ Sbjct: 787 KGEVKEIIDILKKSYD----RLVGENDEQLLFDNVKWNTLIV 824
>NU5M_POLOR (Q95918) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH| dehydrogenase subunit 5) Length = 613 Score = 28.5 bits (62), Expect = 9.9 Identities = 17/44 (38%), Positives = 25/44 (56%) Frame = +1 Query: 325 FIAKPIEIWTQGVKHRLVLSFSIFINSIC*LNCLVHHLLSFRVH 456 FI KP W VK+ + LSF F++ I + CL +L SF ++ Sbjct: 29 FITKPSNKWPFQVKNAVKLSF--FVSLIPSITCLNLNLQSFTIY 70 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,115,991 Number of Sequences: 219361 Number of extensions: 1067536 Number of successful extensions: 2663 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 2619 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2661 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3362826254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
