>dbj|AK111437.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-A03, full
            insert sequence
          Length = 1587

 Score =  254 bits (128), Expect = 2e-64
 Identities = 301/360 (83%)
 Strand = Plus / Minus

                                                                        
Query: 97   agcagcttgcagagcattcgccttctcggcagccactgaagcgtctgcacctctgccctc 156
            |||||| || |||||||| ||||| ||||  || |||||||| |||||| ||||||| | 
Sbjct: 1477 agcagcctgtagagcatttgccttttcggatgcgactgaagcatctgcagctctgccatg 1418

                                                                        
Query: 157  catcgtgtatgctttctccagcaagcgccacaagaaaggcgcgccctgtngnntgctgat 216
            ||  | |||||| ||||||||||||||||||||||| || || |||| | |  | || ||
Sbjct: 1417 caatgagtatgccttctccagcaagcgccacaagaagggtgcaccctctcgtttcctaat 1358

                                                                        
Query: 217  ttgtntgacgagcagctcaattgctgtagacgtctctccagcatttaataagacagtgta 276
            |||| |  |||||| |||||||||| | ||  ||||||| | ||||| ||  ||||||||
Sbjct: 1357 ttgtttctcgagcacctcaattgctctggaactctctccggtatttattagcacagtgta 1298

                                                                        
Query: 277  ccaaacttcattgaagacgtccacttgttcatccgatgcgccaatcattttatagctaag 336
            |||||||||||||||||| |||||||| ||||| ||||| |||||||||||| | || ||
Sbjct: 1297 ccaaacttcattgaagacatccacttgctcatctgatgccccaatcattttacaactgag 1238

                                                                        
Query: 337  cccatcgaaatctggacccagggtgtcaaacaccgccttgtgctctccttttccatattt 396
              |||||||||||||||||| | ||||||| ||   ||||||||||||||||||||||| 
Sbjct: 1237 tgcatcgaaatctggacccaagatgtcaaagactttcttgtgctctccttttccatattc 1178

                                                                        
Query: 397  ataaacagcatctgctagctgaattgccttgtgcatcacttgctgtcttttcgtgtccat 456
            ||| ||||| ||||||||||| |||||||| ||||||||||||||| |||| ||||||||
Sbjct: 1177 atacacagcctctgctagctggattgccttttgcatcacttgctgtttttttgtgtccat 1118

>gb|AC097277.6| Oryza sativa chromosome 3 BAC OSJNBa0022C08 genomic sequence, complete
             sequence
          Length = 150155

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 70/79 (88%)
 Strand = Plus / Minus

                                                                         
Query: 339   catcgaaatctggacccagggtgtcaaacaccgccttgtgctctccttttccatatttat 398
             |||||||||||||||||| | ||||||| ||   ||||||||||||||||||||||| ||
Sbjct: 48389 catcgaaatctggacccaagatgtcaaagactttcttgtgctctccttttccatattcat 48330

                                
Query: 399   aaacagcatctgctagctg 417
             | ||||| |||||||||||
Sbjct: 48329 acacagcctctgctagctg 48311



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                     
Query: 269   acagtgtaccaaacttcattgaagacgtccacttgttcatccgatgcgccaatcat 324
             |||||||||||||||||||||||||| |||||||| ||||| ||||| ||||||||
Sbjct: 48545 acagtgtaccaaacttcattgaagacatccacttgctcatctgatgccccaatcat 48490



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 419   attgccttgtgcatcacttgctgtcttttcgtgtccat 456
             |||||||| ||||||||||||||| |||| ||||||||
Sbjct: 47961 attgccttttgcatcacttgctgtttttttgtgtccat 47924



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 57/70 (81%)
 Strand = Plus / Minus

                                                                         
Query: 174   ccagcaagcgccacaagaaaggcgcgccctgtngnntgctgatttgtntgacgagcagct 233
             ||||||||||||||||||| || || |||| | |  | || |||||| |  |||||| ||
Sbjct: 48729 ccagcaagcgccacaagaagggtgcaccctctcgtttcctaatttgtttctcgagcacct 48670

                       
Query: 234   caattgctgt 243
             ||||||||||
Sbjct: 48669 caattgctgt 48660

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 70/79 (88%)
 Strand = Plus / Plus

                                                                            
Query: 339      catcgaaatctggacccagggtgtcaaacaccgccttgtgctctccttttccatatttat 398
                |||||||||||||||||| | ||||||| ||   ||||||||||||||||||||||| ||
Sbjct: 27256006 catcgaaatctggacccaagatgtcaaagactttcttgtgctctccttttccatattcat 27256065

                                   
Query: 399      aaacagcatctgctagctg 417
                | ||||| |||||||||||
Sbjct: 27256066 acacagcctctgctagctg 27256084



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                        
Query: 269      acagtgtaccaaacttcattgaagacgtccacttgttcatccgatgcgccaatcat 324
                |||||||||||||||||||||||||| |||||||| ||||| ||||| ||||||||
Sbjct: 27255850 acagtgtaccaaacttcattgaagacatccacttgctcatctgatgccccaatcat 27255905



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                      
Query: 419      attgccttgtgcatcacttgctgtcttttcgtgtccat 456
                |||||||| ||||||||||||||| |||| ||||||||
Sbjct: 27256434 attgccttttgcatcacttgctgtttttttgtgtccat 27256471



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 57/70 (81%)
 Strand = Plus / Plus

                                                                            
Query: 174      ccagcaagcgccacaagaaaggcgcgccctgtngnntgctgatttgtntgacgagcagct 233
                ||||||||||||||||||| || || |||| | |  | || |||||| |  |||||| ||
Sbjct: 27255666 ccagcaagcgccacaagaagggtgcaccctctcgtttcctaatttgtttctcgagcacct 27255725

                          
Query: 234      caattgctgt 243
                ||||||||||
Sbjct: 27255726 caattgctgt 27255735



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 171      tctccagcaagcgccacaag 190
                ||||||||||||||||||||
Sbjct: 22106483 tctccagcaagcgccacaag 22106464

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 70/79 (88%)
 Strand = Plus / Plus

                                                                            
Query: 339      catcgaaatctggacccagggtgtcaaacaccgccttgtgctctccttttccatatttat 398
                |||||||||||||||||| | ||||||| ||   ||||||||||||||||||||||| ||
Sbjct: 27347329 catcgaaatctggacccaagatgtcaaagactttcttgtgctctccttttccatattcat 27347388

                                   
Query: 399      aaacagcatctgctagctg 417
                | ||||| |||||||||||
Sbjct: 27347389 acacagcctctgctagctg 27347407



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                        
Query: 269      acagtgtaccaaacttcattgaagacgtccacttgttcatccgatgcgccaatcat 324
                |||||||||||||||||||||||||| |||||||| ||||| ||||| ||||||||
Sbjct: 27347173 acagtgtaccaaacttcattgaagacatccacttgctcatctgatgccccaatcat 27347228



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                      
Query: 419      attgccttgtgcatcacttgctgtcttttcgtgtccat 456
                |||||||| ||||||||||||||| |||| ||||||||
Sbjct: 27347757 attgccttttgcatcacttgctgtttttttgtgtccat 27347794



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 57/70 (81%)
 Strand = Plus / Plus

                                                                            
Query: 174      ccagcaagcgccacaagaaaggcgcgccctgtngnntgctgatttgtntgacgagcagct 233
                ||||||||||||||||||| || || |||| | |  | || |||||| |  |||||| ||
Sbjct: 27346989 ccagcaagcgccacaagaagggtgcaccctctcgtttcctaatttgtttctcgagcacct 27347048

                          
Query: 234      caattgctgt 243
                ||||||||||
Sbjct: 27347049 caattgctgt 27347058



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 171      tctccagcaagcgccacaag 190
                ||||||||||||||||||||
Sbjct: 22099512 tctccagcaagcgccacaag 22099493

>emb|CT863711.2| Medicago truncatula chromosome 5 clone mth2-152j13, COMPLETE SEQUENCE
          Length = 108806

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                              
Query: 273   tgtaccaaacttcattgaagacgtccacttgttcatccgatgcgccaat 321
             ||||||||||||||||||| || || ||||||||||| ||||| |||||
Sbjct: 21687 tgtaccaaacttcattgaatacatcaacttgttcatcagatgctccaat 21735

>gb|AC097263.6| Homo sapiens X BAC RP11-298C3 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 159325

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 258    catttaataagacagtgtacca 279
              ||||||||||||||||||||||
Sbjct: 107385 catttaataagacagtgtacca 107364

>gb|AE017263.1| Mesoplasma florum L1 complete genome
          Length = 793224

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 388    tccatatttataaacagcatctgct 412
              |||||||||||||| ||||||||||
Sbjct: 734750 tccatatttataaaaagcatctgct 734774

>gb|DQ483811.1| Gymnogyps californianus clone 234F microsatellite sequence
          Length = 835

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 418 aattgccttgtgcatcacttg 438
           |||||||||||||||||||||
Sbjct: 701 aattgccttgtgcatcacttg 681

>gb|DQ483782.1| Gymnogyps californianus clone 205F microsatellite sequence
          Length = 669

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 418 aattgccttgtgcatcacttg 438
           |||||||||||||||||||||
Sbjct: 139 aattgccttgtgcatcacttg 159

>emb|AL389915.19| Human DNA sequence from clone RP11-438P9 on chromosome 9 Contains a
              ribosomal protein S16 (RPS16) pseudogene, a peptidylprolyl
              isomerase A (cyclophilin A) (PPIA) pseudogene and a CpG
              island, complete sequence
          Length = 199601

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 380    tctccttttccatatttataa 400
              |||||||||||||||||||||
Sbjct: 186086 tctccttttccatatttataa 186106

>gb|AC114772.5| Homo sapiens BAC clone RP11-427H3 from 2, complete sequence
          Length = 163318

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 50     caaataaatcaccttcagctg 70
              |||||||||||||||||||||
Sbjct: 161195 caaataaatcaccttcagctg 161215

>ref|NM_184794.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 879

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 171 tctccagcaagcgccacaag 190
           ||||||||||||||||||||
Sbjct: 839 tctccagcaagcgccacaag 858

>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete
              sequence
          Length = 1194300

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 453    ccattgaagagactcttgat 472
              ||||||||||||||||||||
Sbjct: 774893 ccattgaagagactcttgat 774912

>gb|AC120176.7| Mus musculus chromosome 18, clone RP24-494J20, complete sequence
          Length = 162180

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 321   tcattttatagctaagcccatcga 344
             ||||||||||| ||||||||||||
Sbjct: 70865 tcattttatagataagcccatcga 70842

>ref|XM_572328.1| Cryptococcus neoformans var. neoformans JEC21 hexokinase (CNH01400)
           partial mRNA
          Length = 1866

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 453 ccattgaagagactcttgat 472
           ||||||||||||||||||||
Sbjct: 442 ccattgaagagactcttgat 461

>ref|XM_572329.1| Cryptococcus neoformans var. neoformans JEC21 hexokinase (CNH01400)
           partial mRNA
          Length = 1953

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 453 ccattgaagagactcttgat 472
           ||||||||||||||||||||
Sbjct: 529 ccattgaagagactcttgat 548

>gb|AC121595.3| Mus musculus BAC clone RP23-299A12 from chromosome X, complete sequence
          Length = 214297

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 254    ccagcatttaataagacagt 273
              ||||||||||||||||||||
Sbjct: 196686 ccagcatttaataagacagt 196705

>gb|AC121781.3| Mus musculus BAC clone RP23-363D24 from chromosome X, complete
            sequence
          Length = 174187

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 254  ccagcatttaataagacagt 273
            ||||||||||||||||||||
Sbjct: 4494 ccagcatttaataagacagt 4513

>gb|AC007364.3| Homo sapiens BAC clone RP11-329H24 from 2, complete sequence
          Length = 200908

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 428    tgcatcacttgctgtctttt 447
              ||||||||||||||||||||
Sbjct: 173822 tgcatcacttgctgtctttt 173803

>gb|AC091783.9| Genomic sequence for Mus musculus, clone RP23-16G10, complete
           sequence
          Length = 228160

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 371 gccttgtgctctccttttcc 390
           ||||||||||||||||||||
Sbjct: 593 gccttgtgctctccttttcc 612

>emb|AL139009.14| Human DNA sequence from clone RP5-976H8 on chromosome 10p14-15.3,
              complete sequence
          Length = 172657

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 380    tctccttttccatatttata 399
              ||||||||||||||||||||
Sbjct: 156984 tctccttttccatatttata 156965

>gb|AC115837.1| Homo sapiens chromosome 8, clone RP11-730G20, complete sequence
          Length = 160709

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 374   ttgtgctctccttttccata 393
             ||||||||||||||||||||
Sbjct: 70004 ttgtgctctccttttccata 70023

>gb|AC022905.7| Homo sapiens chromosome 8, clone RP11-656G20, complete sequence
          Length = 184311

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 374    ttgtgctctccttttccata 393
              ||||||||||||||||||||
Sbjct: 167844 ttgtgctctccttttccata 167863

>gb|AC163646.2| Mus musculus BAC clone RP23-207D1 from chromosome 14, complete
            sequence
          Length = 185289

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 371  gccttgtgctctccttttcc 390
            ||||||||||||||||||||
Sbjct: 3463 gccttgtgctctccttttcc 3444

>gb|AC093865.2| Homo sapiens BAC clone RP11-560C24 from 2, complete sequence
          Length = 186218

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 373    cttgtgctctccttttccatattt 396
              ||||| ||||||||||||||||||
Sbjct: 161347 cttgttctctccttttccatattt 161324

>gb|AC011003.7|AC011003 Homo sapiens chromosome 8 clone RP11-86O15, complete sequence
          Length = 189042

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 374   ttgtgctctccttttccata 393
             ||||||||||||||||||||
Sbjct: 63635 ttgtgctctccttttccata 63654

>gb|AC109602.6| Oryza sativa chromosome 3 BAC OSJNBa0087M10 genomic sequence, complete
             sequence
          Length = 167397

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 171   tctccagcaagcgccacaag 190
             ||||||||||||||||||||
Sbjct: 41799 tctccagcaagcgccacaag 41818

>gb|AC090874.9| Oryza sativa chromosome 3 BAC OJ1523_A02 genomic sequence, complete
              sequence
          Length = 132987

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 171    tctccagcaagcgccacaag 190
              ||||||||||||||||||||
Sbjct: 118379 tctccagcaagcgccacaag 118398

>emb|BX005240.7| Mouse DNA sequence from clone RP23-185M16 on chromosome X, complete
              sequence
          Length = 197310

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 254    ccagcatttaataagacagt 273
              ||||||||||||||||||||
Sbjct: 131929 ccagcatttaataagacagt 131910

>gb|M55616.1|MUSPROTA Mus musculus mouse mast cell protease-4 gene, complete cds
          Length = 4644

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 371  gccttgtgctctccttttcc 390
            ||||||||||||||||||||
Sbjct: 2703 gccttgtgctctccttttcc 2684


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,514,136
Number of Sequences: 3902068
Number of extensions: 3514136
Number of successful extensions: 59328
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59190
Number of HSP's gapped (non-prelim): 134
length of query: 486
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 464
effective length of database: 17,147,199,772
effective search space: 7956300694208
effective search space used: 7956300694208
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)