ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal18m18 |
|---|---|
| Clone Library Name | barley_pub |
>CLCD_ARATH (P92943) Chloride channel protein CLC-d (AtCLC-d)| Length = 792 Score = 153 bits (386), Expect = 3e-37 Identities = 79/118 (66%), Positives = 97/118 (82%), Gaps = 3/118 (2%) Frame = -1 Query: 540 SSKGKSIDDIHLTXEELGLYLDLAPFLNPSPYIVPEDMSLAKVYNLFRQLGLRHIFVVPR 361 SSKG I+DIHLT ++L +Y+DLAPFLNPSPY+VPEDMSL KVYNLFRQLGLRH+FVVPR Sbjct: 678 SSKGLCIEDIHLTSDDLEMYIDLAPFLNPSPYVVPEDMSLTKVYNLFRQLGLRHLFVVPR 737 Query: 360 PSRVVGLITRKDLLLEEDGNTATTEL-QSTSVRAYLNGKTAGGSVHLE--RPLLDSLM 196 PSRV+GLITRKDLL+EE+G ++ EL QSTSVR G+ + + ++ RPLLD L+ Sbjct: 738 PSRVIGLITRKDLLIEENGESSAVELQQSTSVR----GRYSETATRMDAARPLLDDLL 791
>CLCG_ARATH (P60300) Putative chloride channel-like protein CLC-g| Length = 763 Score = 81.3 bits (199), Expect = 2e-15 Identities = 40/79 (50%), Positives = 54/79 (68%), Gaps = 3/79 (3%) Frame = -1 Query: 540 SSKGKSIDDIHLTXEELGLYLDLAPFLNPSPYIVPEDMSLAKVYNLFRQLGLRHIFVVPR 361 S + I+D+ L+ EEL +YLDL PF N SPY V E MSLAK LFR++G+RH+ V+P+ Sbjct: 660 SGRSDKIEDVELSEEELNMYLDLHPFSNASPYTVVETMSLAKALILFREVGIRHLLVIPK 719 Query: 360 PSR---VVGLITRKDLLLE 313 S VVG++TR D + E Sbjct: 720 TSNRPPVVGILTRHDFMPE 738
>CLCN7_HUMAN (P51798) Chloride channel protein 7 (ClC-7)| Length = 805 Score = 79.7 bits (195), Expect = 5e-15 Identities = 39/80 (48%), Positives = 53/80 (66%) Frame = -1 Query: 522 IDDIHLTXEELGLYLDLAPFLNPSPYIVPEDMSLAKVYNLFRQLGLRHIFVVPRPSRVVG 343 I IH++ +E +DL+ F+NPSPY VP++ SL +V+ LFR LGLRH+ VV ++VVG Sbjct: 721 IQSIHVSQDERECTMDLSEFMNPSPYTVPQEASLPRVFKLFRALGLRHLVVVDNRNQVVG 780 Query: 342 LITRKDLLLEEDGNTATTEL 283 L+TRKDL G EL Sbjct: 781 LVTRKDLARYRLGKRGLEEL 800
>CLCN7_RAT (P51799) Chloride channel protein 7 (ClC-7)| Length = 803 Score = 79.3 bits (194), Expect = 6e-15 Identities = 39/80 (48%), Positives = 53/80 (66%) Frame = -1 Query: 522 IDDIHLTXEELGLYLDLAPFLNPSPYIVPEDMSLAKVYNLFRQLGLRHIFVVPRPSRVVG 343 I IH++ +E +DL+ F+NPSPY VP++ SL +V+ LFR LGLRH+ VV ++VVG Sbjct: 719 IQSIHVSQDERECTMDLSEFMNPSPYTVPQEASLPRVFKLFRALGLRHLVVVDNHNQVVG 778 Query: 342 LITRKDLLLEEDGNTATTEL 283 L+TRKDL G EL Sbjct: 779 LVTRKDLARYRLGKGGLEEL 798
>CLCN7_MOUSE (O70496) Chloride channel protein 7 (ClC-7)| Length = 803 Score = 79.3 bits (194), Expect = 6e-15 Identities = 39/80 (48%), Positives = 53/80 (66%) Frame = -1 Query: 522 IDDIHLTXEELGLYLDLAPFLNPSPYIVPEDMSLAKVYNLFRQLGLRHIFVVPRPSRVVG 343 I IH++ +E +DL+ F+NPSPY VP++ SL +V+ LFR LGLRH+ VV ++VVG Sbjct: 719 IQSIHVSQDERECTMDLSEFMNPSPYTVPQEASLPRVFKLFRALGLRHLVVVDNHNQVVG 778 Query: 342 LITRKDLLLEEDGNTATTEL 283 L+TRKDL G EL Sbjct: 779 LVTRKDLARYRLGKGGLEEL 798
>CLCC_ARATH (Q96282) Chloride channel protein CLC-c (AtCLC-c)| Length = 779 Score = 77.0 bits (188), Expect = 3e-14 Identities = 41/77 (53%), Positives = 54/77 (70%), Gaps = 3/77 (3%) Frame = -1 Query: 534 KGKSIDDIHLTXEELGLYLDLAPFLNPSPYIVPEDMSLAKVYNLFRQLGLRHIFVVPR-P 358 KG I+D+ L+ EE+ +Y+DL P N SPY V E +SLAK LFRQLGLRH+ VVP+ P Sbjct: 690 KGLKIEDLDLSEEEMEMYVDLHPITNTSPYTVLETLSLAKAAILFRQLGLRHLCVVPKTP 749 Query: 357 SR--VVGLITRKDLLLE 313 R +VG++TR D + E Sbjct: 750 GRPPIVGILTRHDFMPE 766
>CLCB_ARATH (P92942) Chloride channel protein CLC-b (AtCLC-b)| Length = 780 Score = 70.9 bits (172), Expect = 2e-12 Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 5/73 (6%) Frame = -1 Query: 525 SIDDIHLTXEELGLYLDLAPFLNPSPYIVPEDMSLAKVYNLFRQLGLRHIFVVPRPSR-- 352 + DD+ +T E+ +Y+DL P N +PY V E+MS+AK LFRQ+GLRH+ +VP+ Sbjct: 687 NFDDVAITSAEMEMYVDLHPLTNTTPYTVMENMSVAKALVLFRQVGLRHLLIVPKIQASG 746 Query: 351 ---VVGLITRKDL 322 VVG++TR+DL Sbjct: 747 MCPVVGILTRQDL 759
>CLCA_ARATH (P92941) Chloride channel protein CLC-a (AtCLC-a)| Length = 775 Score = 70.1 bits (170), Expect = 4e-12 Identities = 34/73 (46%), Positives = 49/73 (67%), Gaps = 5/73 (6%) Frame = -1 Query: 525 SIDDIHLTXEELGLYLDLAPFLNPSPYIVPEDMSLAKVYNLFRQLGLRHIFVVPR----- 361 + DD+ +T E+ LY+DL P N +PY V + MS+AK LFR +GLRH+ VVP+ Sbjct: 682 NFDDVAITSSEMQLYVDLHPLTNTTPYTVVQSMSVAKALVLFRSVGLRHLLVVPKIQASG 741 Query: 360 PSRVVGLITRKDL 322 S V+G++TR+DL Sbjct: 742 MSPVIGILTRQDL 754
>CLCN6_HUMAN (P51797) Chloride channel protein 6 (ClC-6)| Length = 869 Score = 62.4 bits (150), Expect = 8e-10 Identities = 29/70 (41%), Positives = 46/70 (65%) Frame = -1 Query: 522 IDDIHLTXEELGLYLDLAPFLNPSPYIVPEDMSLAKVYNLFRQLGLRHIFVVPRPSRVVG 343 I D+ LT + +D+ P++NPSP+ V + +++V+NLFR +GLRH+ VV +VG Sbjct: 787 IHDLDLTLLNPRMIVDVTPYMNPSPFTVSPNTHVSQVFNLFRTMGLRHLPVVNAVGEIVG 846 Query: 342 LITRKDLLLE 313 +ITR +L E Sbjct: 847 IITRHNLTYE 856
>CLCN6_RABIT (Q9TT16) Chloride channel protein 6 (ClC-6)| Length = 869 Score = 62.0 bits (149), Expect = 1e-09 Identities = 28/70 (40%), Positives = 46/70 (65%) Frame = -1 Query: 522 IDDIHLTXEELGLYLDLAPFLNPSPYIVPEDMSLAKVYNLFRQLGLRHIFVVPRPSRVVG 343 I D+ LT + +D+ P++NPSP+ V + +++V+NLFR +GLRH+ VV +VG Sbjct: 787 IHDLDLTLLNPRMIVDVTPYMNPSPFTVSPNTHVSQVFNLFRTMGLRHLPVVNAVGEIVG 846 Query: 342 LITRKDLLLE 313 ++TR +L E Sbjct: 847 IVTRHNLTYE 856
>CLCN6_MOUSE (O35454) Chloride channel protein 6 (ClC-6)| Length = 870 Score = 61.6 bits (148), Expect = 1e-09 Identities = 29/70 (41%), Positives = 46/70 (65%) Frame = -1 Query: 522 IDDIHLTXEELGLYLDLAPFLNPSPYIVPEDMSLAKVYNLFRQLGLRHIFVVPRPSRVVG 343 I D+ LT + +D+ P++NPSP+ V + +++V+NLFR +GLRH+ VV +VG Sbjct: 788 IHDLDLTLLNPRMIVDVTPYMNPSPFTVSPNTHVSQVFNLFRTMGLRHLPVVNAVGEIVG 847 Query: 342 LITRKDLLLE 313 +ITR +L E Sbjct: 848 IITRHNLTNE 857
>CLCN4_RAT (P51794) Chloride channel protein 4 (ClC-4)| Length = 747 Score = 43.1 bits (100), Expect = 5e-04 Identities = 23/54 (42%), Positives = 35/54 (64%) Frame = -1 Query: 480 LDLAPFLNPSPYIVPEDMSLAKVYNLFRQLGLRHIFVVPRPSRVVGLITRKDLL 319 L L LN SP+ V + + V ++FR+LGLR +V R R++G+IT+KD+L Sbjct: 678 LKLRRILNLSPFTVTDHTPMETVVDIFRKLGLRQC-LVTRSGRLLGIITKKDVL 730
>CLCN4_HUMAN (P51793) Chloride channel protein 4 (ClC-4)| Length = 760 Score = 43.1 bits (100), Expect = 5e-04 Identities = 23/54 (42%), Positives = 35/54 (64%) Frame = -1 Query: 480 LDLAPFLNPSPYIVPEDMSLAKVYNLFRQLGLRHIFVVPRPSRVVGLITRKDLL 319 L L LN SP+ V + + V ++FR+LGLR +V R R++G+IT+KD+L Sbjct: 691 LKLRRILNLSPFTVTDHTPMETVVDIFRKLGLRQC-LVTRSGRLLGIITKKDVL 743
>CLCN4_MOUSE (Q61418) Chloride channel protein 4 (ClC-4)| Length = 747 Score = 41.6 bits (96), Expect = 0.001 Identities = 22/54 (40%), Positives = 34/54 (62%) Frame = -1 Query: 480 LDLAPFLNPSPYIVPEDMSLAKVYNLFRQLGLRHIFVVPRPSRVVGLITRKDLL 319 L L N SP+ V + + V ++FR+LGLR +V R R++G+IT+KD+L Sbjct: 678 LKLRRIFNLSPFTVTDHTPMETVVDIFRKLGLRQC-LVTRSGRLLGIITKKDVL 730
>CLCN3_PONPY (Q5RDJ7) Chloride channel protein 3 (ClC-3)| Length = 801 Score = 39.3 bits (90), Expect = 0.007 Identities = 21/54 (38%), Positives = 34/54 (62%) Frame = -1 Query: 480 LDLAPFLNPSPYIVPEDMSLAKVYNLFRQLGLRHIFVVPRPSRVVGLITRKDLL 319 L L L+ SP+ V + + V ++FR+LGLR +V R++G+IT+KD+L Sbjct: 732 LKLRSILDMSPFTVTDHTPMEIVVDIFRKLGLRQC-LVTHNGRLLGIITKKDIL 784
>CLCN3_RABIT (O18894) Chloride channel protein 3 (ClC-3)| Length = 760 Score = 39.3 bits (90), Expect = 0.007 Identities = 21/54 (38%), Positives = 34/54 (62%) Frame = -1 Query: 480 LDLAPFLNPSPYIVPEDMSLAKVYNLFRQLGLRHIFVVPRPSRVVGLITRKDLL 319 L L L+ SP+ V + + V ++FR+LGLR +V R++G+IT+KD+L Sbjct: 691 LKLRSILDMSPFTVTDHTPMEIVVDIFRKLGLRQC-LVTHNGRLLGIITKKDIL 743
>CLCN3_MOUSE (P51791) Chloride channel protein 3 (ClC-3)| Length = 760 Score = 39.3 bits (90), Expect = 0.007 Identities = 21/54 (38%), Positives = 34/54 (62%) Frame = -1 Query: 480 LDLAPFLNPSPYIVPEDMSLAKVYNLFRQLGLRHIFVVPRPSRVVGLITRKDLL 319 L L L+ SP+ V + + V ++FR+LGLR +V R++G+IT+KD+L Sbjct: 691 LKLRSILDMSPFTVTDHTPMEIVVDIFRKLGLRQC-LVTHNGRLLGIITKKDIL 743
>CLCN3_HUMAN (P51790) Chloride channel protein 3 (ClC-3)| Length = 762 Score = 39.3 bits (90), Expect = 0.007 Identities = 21/54 (38%), Positives = 34/54 (62%) Frame = -1 Query: 480 LDLAPFLNPSPYIVPEDMSLAKVYNLFRQLGLRHIFVVPRPSRVVGLITRKDLL 319 L L L+ SP+ V + + V ++FR+LGLR +V R++G+IT+KD+L Sbjct: 693 LKLRSILDMSPFTVTDHTPMEIVVDIFRKLGLRQC-LVTHNGRLLGIITKKDIL 745
>CLCN3_CAVPO (Q9R279) Chloride channel protein 3 (ClC-3)| Length = 760 Score = 39.3 bits (90), Expect = 0.007 Identities = 21/54 (38%), Positives = 34/54 (62%) Frame = -1 Query: 480 LDLAPFLNPSPYIVPEDMSLAKVYNLFRQLGLRHIFVVPRPSRVVGLITRKDLL 319 L L L+ SP+ V + + V ++FR+LGLR +V R++G+IT+KD+L Sbjct: 691 LKLRSILDMSPFTVTDHTPMEIVVDIFRKLGLRQC-LVTHNGRLLGIITKKDIL 743
>CLCN3_RAT (P51792) Chloride channel protein 3 (ClC-3)| Length = 760 Score = 38.9 bits (89), Expect = 0.009 Identities = 21/54 (38%), Positives = 34/54 (62%) Frame = -1 Query: 480 LDLAPFLNPSPYIVPEDMSLAKVYNLFRQLGLRHIFVVPRPSRVVGLITRKDLL 319 L L L+ SP+ V + + V ++FR+LGLR +V R++G+IT+KD+L Sbjct: 691 LKLRSILDMSPFTVTDHTPMEIVVDVFRKLGLRQC-LVTHNGRLLGIITKKDIL 743
>CLCN5_RAT (P51796) Chloride channel protein 5 (ClC-5)| Length = 746 Score = 37.0 bits (84), Expect = 0.036 Identities = 21/54 (38%), Positives = 34/54 (62%) Frame = -1 Query: 480 LDLAPFLNPSPYIVPEDMSLAKVYNLFRQLGLRHIFVVPRPSRVVGLITRKDLL 319 L L L+ SP+ V + + V ++FR+LGLR +V R++G+IT+KD+L Sbjct: 677 LKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQC-LVTHNGRLLGIITKKDVL 729
>CLCN5_MOUSE (Q9WVD4) Chloride channel protein 5 (ClC-5)| Length = 746 Score = 37.0 bits (84), Expect = 0.036 Identities = 21/54 (38%), Positives = 34/54 (62%) Frame = -1 Query: 480 LDLAPFLNPSPYIVPEDMSLAKVYNLFRQLGLRHIFVVPRPSRVVGLITRKDLL 319 L L L+ SP+ V + + V ++FR+LGLR +V R++G+IT+KD+L Sbjct: 677 LKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQC-LVTHNGRLLGIITKKDVL 729
>CLCN5_HUMAN (P51795) Chloride channel protein 5 (ClC-5)| Length = 746 Score = 37.0 bits (84), Expect = 0.036 Identities = 21/54 (38%), Positives = 34/54 (62%) Frame = -1 Query: 480 LDLAPFLNPSPYIVPEDMSLAKVYNLFRQLGLRHIFVVPRPSRVVGLITRKDLL 319 L L L+ SP+ V + + V ++FR+LGLR +V R++G+IT+KD+L Sbjct: 677 LKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQC-LVTHNGRLLGIITKKDVL 729
>Y525_METKA (P50100) Hypothetical protein MK0525 (OrfX)| Length = 196 Score = 32.0 bits (71), Expect = 1.1 Identities = 16/52 (30%), Positives = 28/52 (53%) Frame = -1 Query: 441 VPEDMSLAKVYNLFRQLGLRHIFVVPRPSRVVGLITRKDLLLEEDGNTATTE 286 V EDM + + L G+R + +V +++G++T +D+L E AT E Sbjct: 83 VEEDMEVNEAVKLMVDKGIRRLPIVDDNGKLIGIVTMQDILQVEPYLVATIE 134
>SYI_DEIRA (Q9RUP8) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 1078 Score = 31.2 bits (69), Expect = 2.0 Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Frame = -1 Query: 540 SSKGKSIDDIHLTXEELGLYLDLAPFLNPSPYIVPEDMSLAKVYNLFRQLGLRHIF---- 373 +S ++I D + E +G +LDL PYI ++ + V+NL R+L + + Sbjct: 127 TSVWETIQDWNELTERMGYWLDLG-----DPYITYQNSYVESVWNLLRRLHEKGLVAQDY 181 Query: 372 -VVPRPSRVVGLITRKDL 322 VVP R+ ++R +L Sbjct: 182 KVVPLSPRISSTLSRAEL 199
>Y452_HAEIN (P44717) Hypothetical UPF0053 protein HI0452| Length = 432 Score = 30.8 bits (68), Expect = 2.6 Identities = 18/61 (29%), Positives = 29/61 (47%) Frame = -1 Query: 468 PFLNPSPYIVPEDMSLAKVYNLFRQLGLRHIFVVPRPSRVVGLITRKDLLLEEDGNTATT 289 P L VP+ +SL +V LF+ G +V + VVG++T D++ G + Sbjct: 284 PKLLRKALFVPDTLSLYEVLELFKSTGEDFAIIVNEYALVVGIVTLNDVMSIVMGELVSN 343 Query: 288 E 286 E Sbjct: 344 E 344
>TOP3_HAEIN (P43704) DNA topoisomerase 3 (EC 5.99.1.2) (DNA topoisomerase III)| Length = 651 Score = 30.8 bits (68), Expect = 2.6 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = +3 Query: 207 QEEDAPGARSPLPFYRSGRLLHWSTGALLSQYCRPPR-VRDLFLLSVL 347 +E+D LP + G++LH G ++S+ +PP+ D LLS + Sbjct: 462 KEDDTENQEPLLPIVKKGQILHCERGEVMSKKTQPPKPFTDATLLSAM 509
>STS1_SCHPO (P36209) Delta(24(24(1)))-sterol reductase (EC 1.3.1.71) (Sterol| delta(24(28))-reductase) (C-24(28) sterol reductase) Length = 453 Score = 30.4 bits (67), Expect = 3.3 Identities = 18/49 (36%), Positives = 25/49 (51%) Frame = -1 Query: 483 YLDLAPFLNPSPYIVPEDMSLAKVYNLFRQLGLRHIFVVPRPSRVVGLI 337 YL N S +I PE ++A N FR LG +I+V P+R L+ Sbjct: 32 YLWACSKFNDSQFIKPESFTIAGFQNFFRTLG-HYIYVGAYPTRYAFLV 79
>YC19_KLEPN (Q48445) Hypothetical UPF0053 protein in cps region (ORF19)| (Fragment) Length = 320 Score = 30.4 bits (67), Expect = 3.3 Identities = 19/60 (31%), Positives = 26/60 (43%) Frame = -1 Query: 480 LDLAPFLNPSPYIVPEDMSLAKVYNLFRQLGLRHIFVVPRPSRVVGLITRKDLLLEEDGN 301 LDL + P + PE + L FRQ FVV V G++T D++ GN Sbjct: 181 LDLQALVR-QPLVFPEGLPLLSALEQFRQARTHFAFVVDEFGSVEGIVTLSDVMETIAGN 239
>YBP3_ACIAM (P32987) Hypothetical 17.7 kDa protein in bps2 3'region (ORF3)| Length = 164 Score = 30.0 bits (66), Expect = 4.4 Identities = 12/43 (27%), Positives = 27/43 (62%) Frame = -1 Query: 447 YIVPEDMSLAKVYNLFRQLGLRHIFVVPRPSRVVGLITRKDLL 319 Y+V ++++A+ ++ L + V+ +RVVG+IT +D++ Sbjct: 14 YVVKPNVTIAEAAKEMKEHNLGSLVVIDSQNRVVGIITERDIV 56
>MMT1_WOLBI (Q9SWR3) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met| S-methyltransferase) Length = 1088 Score = 29.6 bits (65), Expect = 5.7 Identities = 14/38 (36%), Positives = 25/38 (65%) Frame = -1 Query: 378 IFVVPRPSRVVGLITRKDLLLEEDGNTATTELQSTSVR 265 + V+ +PS +G K++ LE+DG+T T+L T++R Sbjct: 1006 VSVIAKPSAYLG----KNIKLEKDGSTWVTKLDGTNIR 1039
>CLCN1_CANFA (Q9MZT1) Chloride channel protein, skeletal muscle (Chloride| channel protein 1) (ClC-1) Length = 976 Score = 29.6 bits (65), Expect = 5.7 Identities = 17/55 (30%), Positives = 31/55 (56%) Frame = -1 Query: 462 LNPSPYIVPEDMSLAKVYNLFRQLGLRHIFVVPRPSRVVGLITRKDLLLEEDGNT 298 ++ SP+ + E SL K + LF LGL H+ V ++ G++ ++L +G+T Sbjct: 816 IDQSPFQLVEQTSLHKTHTLFSLLGL-HLAYVTSMGKLRGVLALEELQKAIEGHT 869
>MTB3_BACAR (P22772) Modification methylase BanIII (EC 2.1.1.72)| (Adenine-specific methyltransferase BanIII) (M.BanIII) Length = 580 Score = 29.6 bits (65), Expect = 5.7 Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 5/79 (6%) Frame = -1 Query: 519 DDIHLTXEELGLYLDLAPFLNPSPYIVPEDMSLAKVYNLFRQLGLRHIFVVP-----RPS 355 DD E + L + P++ LAK++NL ++ L H F+V +P Sbjct: 123 DDDLSKIEPVDLIIANPPYVRTQVLGADRAQKLAKLFNLKGRVDLYHAFLVAMTLQLKPG 182 Query: 354 RVVGLITRKDLLLEEDGNT 298 ++G+IT L G + Sbjct: 183 GLIGVITSNKYLANSSGES 201
>CORC_PASMU (Q9CM13) Magnesium and cobalt efflux protein corC| Length = 300 Score = 29.6 bits (65), Expect = 5.7 Identities = 19/53 (35%), Positives = 26/53 (49%) Frame = -1 Query: 477 DLAPFLNPSPYIVPEDMSLAKVYNLFRQLGLRHIFVVPRPSRVVGLITRKDLL 319 DL P L P+ IVPE + ++ FR VV V GL+T +D+L Sbjct: 136 DLMPLLRPA-VIVPESKRVDRMLKDFRSERFHMAIVVDEFGAVSGLVTIEDIL 187
>INCE_MOUSE (Q9WU62) Inner centromere protein| Length = 880 Score = 29.6 bits (65), Expect = 5.7 Identities = 15/46 (32%), Positives = 24/46 (52%) Frame = +3 Query: 195 SSDCQEEDAPGARSPLPFYRSGRLLHWSTGALLSQYCRPPRVRDLF 332 +SD +D R P+P + G L + A++ QY PP + +LF Sbjct: 795 NSDDSTDDESHPRKPIPSWAKGTQL---SQAIVHQYYHPPNILELF 837
>IMDH_AQUAE (O67820) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 490 Score = 29.3 bits (64), Expect = 7.5 Identities = 12/40 (30%), Positives = 25/40 (62%) Frame = -1 Query: 438 PEDMSLAKVYNLFRQLGLRHIFVVPRPSRVVGLITRKDLL 319 PE ++L + +FR+ + + +V + ++ GLIT KD++ Sbjct: 167 PEGITLDEAEEIFRKYKIEKLPIVDKEGKIKGLITIKDIV 206
>THYG_RAT (P06882) Thyroglobulin precursor| Length = 2768 Score = 29.3 bits (64), Expect = 7.5 Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 10/79 (12%) Frame = +3 Query: 180 VFTARSSDCQEE----------DAPGARSPLPFYRSGRLLHWSTGALLSQYCRPPRVRDL 329 +F A+ C E + PG SP S L +GA L C PPR+++L Sbjct: 357 LFCAKDQSCASERQQALSRLYFETPGYFSPQDLLSSEDRLVPVSGARLDISC-PPRIKEL 415 Query: 330 FLLSVLRHEKAEERRRYAS 386 F+ S L A ER + S Sbjct: 416 FVDSGLLRSIAVERYQQLS 434
>EPSA1_RALSO (P58597) EPS I polysaccharide export outer membrane protein epsA| precursor Length = 381 Score = 29.3 bits (64), Expect = 7.5 Identities = 14/40 (35%), Positives = 23/40 (57%) Frame = -3 Query: 418 KGVQSLPPTRIEAYLRRSSAFSCRRTDNKKRSLTRGGRQY 299 + + +P T +EA L R+ + DN + LTRGG+Q+ Sbjct: 197 QSIDDVPMTLVEA-LNRAGGINTTTGDNSRIRLTRGGKQW 235
>RS3_PYRAE (Q8ZWI0) 30S ribosomal protein S3P| Length = 218 Score = 29.3 bits (64), Expect = 7.5 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = -1 Query: 393 LGLRHIFVVPRPSRVVGLITRKDLLLEEDGNTATTEL 283 LG R + RPSR++G RK +++E N TT+L Sbjct: 47 LGTRIVIYAERPSRIIG---RKGAIVKEISNILTTKL 80
>IMDH_PASMU (Q9L6B7) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 487 Score = 28.9 bits (63), Expect = 9.7 Identities = 17/62 (27%), Positives = 27/62 (43%) Frame = -1 Query: 450 PYIVPEDMSLAKVYNLFRQLGLRHIFVVPRPSRVVGLITRKDLLLEEDGNTATTELQSTS 271 P V +SLA++ L ++ G VV +VG+IT +D D N + + Sbjct: 97 PVTVSPTLSLAELSELVKKNGFASFPVVDDEKNLVGIITGRDTRFVTDLNKTVADFMTPK 156 Query: 270 VR 265 R Sbjct: 157 AR 158
>CLCN1_MOUSE (Q64347) Chloride channel protein, skeletal muscle (Chloride channel| protein 1) (ClC-1) Length = 994 Score = 28.9 bits (63), Expect = 9.7 Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 4/80 (5%) Frame = -1 Query: 462 LNPSPYIVPEDMSLAKVYNLFRQLGLRHIFVVPRPSRVVGLITRKDLLLEEDGNTATTEL 283 ++ SP+ + E +L K + LF LGL H+ V ++ G++ ++L G+T + Sbjct: 827 IDQSPFQLVEQTTLHKTHTLFSLLGL-HLAYVTSMGKLTGVLALEELQKAIKGHTKSGVQ 885 Query: 282 QSTSVRAYLN----GKTAGG 235 + ++ N KT GG Sbjct: 886 LRPPLASFRNTTSIRKTPGG 905 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 82,668,278 Number of Sequences: 219361 Number of extensions: 1749351 Number of successful extensions: 4636 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 4488 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4624 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4315578075 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
