ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal18m18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK059537.1| Oryza sativa (japonica cultivar-group) cDNA clon... 264 3e-67
2ref|XM_469368.1| Oryza sativa (japonica cultivar-group), mRNA 256 7e-65
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 115 2e-22
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
5gb|AC123974.6| Oryza sativa chromosome 3 BAC OSJNBb0021P10 genom... 115 2e-22
6ref|NM_122525.2| Arabidopsis thaliana CLC-D; anion channel/ volt... 68 3e-08
7dbj|AK117364.1| Arabidopsis thaliana At5g26240 mRNA for putative... 68 3e-08
8emb|Z71450.1|ATCLCD A.thaliana mRNA for CLC-d chloride channel p... 68 3e-08
9gb|AC005965.1| Arabidopsis thaliana BAC T19G15, from chromosome ... 48 0.030
10emb|CR932964.2| Medicago truncatula chromosome 5 clone mte1-60l1... 48 0.030
11gb|AF077407.1|F9D12 Arabidopsis thaliana BAC F9D12 48 0.030
12emb|BX936291.25| Zebrafish DNA sequence from clone DKEY-250A11 i... 44 0.47
13ref|NM_001982.2| Homo sapiens v-erb-b2 erythroblastic leukemia v... 44 0.47
14gb|BC082992.1| Homo sapiens v-erb-b2 erythroblastic leukemia vir... 44 0.47
15gb|BC041579.1| Homo sapiens v-erb-b2 erythroblastic leukemia vir... 44 0.47
16gb|BC002706.2| Homo sapiens v-erb-b2 erythroblastic leukemia vir... 44 0.47
17emb|CR858836.1| Pongo pygmaeus mRNA; cDNA DKFZp469G124 (from clo... 44 0.47
18dbj|AK125028.1| Homo sapiens cDNA FLJ43038 fis, clone BRTHA30029... 44 0.47
19dbj|AK124710.1| Homo sapiens cDNA FLJ42720 fis, clone BRAMY40000... 44 0.47
20gb|AC034102.32| Homo sapiens 12 BAC RP11-603J24 (Roswell Park Ca... 44 0.47
21emb|AL954847.17| Zebrafish DNA sequence from clone DKEY-68G8 in ... 44 0.47
22gb|M34309.1|HUMHER3A Human epidermal growth factor receptor (HER... 44 0.47
23gb|M29366.1|HUMEGFRBB3 Human epidermal growth factor receptor (E... 44 0.47
24emb|AL162373.16| Human DNA sequence from clone RP11-272M24 on ch... 42 1.9
25emb|AL449063.13| Human DNA sequence from clone RP11-413P11 on ch... 40 7.4
26emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome 40 7.4
27gb|AC093559.2| Homo sapiens chromosome 1 clone RP11-138K16, comp... 40 7.4
28emb|BX284616.13| Zebrafish DNA sequence from clone DKEY-192I20 i... 40 7.4
29dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
30dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome 40 7.4
31dbj|AP006268.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
32dbj|AP003817.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
33dbj|AP004343.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
34emb|AL929290.5| Zebrafish DNA sequence from clone CH211-67N1, co... 40 7.4
35gb|AF146687.1|FRNINE1 Fugu rubripes U2 small nuclear ribonucleop... 40 7.4
36emb|BX293540.5| Zebrafish DNA sequence from clone DKEY-255N2 in ... 40 7.4
37emb|AL953905.8| Zebrafish DNA sequence from clone CH211-79L10, c... 40 7.4 
>dbj|AK059537.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-E03, full
           insert sequence
          Length = 1234

 Score =  264 bits (133), Expect = 3e-67
 Identities = 237/272 (87%)
 Strand = Plus / Minus

                                                                       
Query: 266 cttacactggtcgactggagctctgttgtcgcagtattgccgtcctcctcgagtaagaga 325
           |||||||| |||||||||||||| |||||| || ||||||||| |||||| ||||| |||
Sbjct: 729 cttacactagtcgactggagctcagttgtcacattattgccgttctcctcaagtaaaaga 670

                                                                       
Query: 326 tcttttcttgttatcagtcctacgacacgagaaggccgaggaacgacgaagatatgcctc 385
           |||| ||||||||| | ||| || |||||||||||||| ||||| || || ||||| | |
Sbjct: 669 tcttgtcttgttattaatccaacaacacgagaaggccgtggaacaacaaatatatgtcgc 610

                                                                       
Query: 386 aatcctagttggcggaagagattgtacacctttgccaaagacatgtcctctggcactatg 445
           ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| 
Sbjct: 609 aatcctagttggcggaagagattgtacacctttgctaaggacatgtcctctggcactata 550

                                                                       
Query: 446 taaggagacggatttagaaatggggcaagatctaaatacaaaccaagttcctcatncgtc 505
           |||||||| ||||||||||||||||| ||||| |||||||  || || || || |  |||
Sbjct: 549 taaggagaaggatttagaaatggggcgagatccaaatacagccctagctcatcttctgtc 490

                                           
Query: 506 aaatgaatatcatcaatcgacttccccttact 537
           ||||||||||||||||| ||||| || |||||
Sbjct: 489 aaatgaatatcatcaattgactttcctttact 458
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>ref|XM_469368.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2349

 Score =  256 bits (129), Expect = 7e-65
 Identities = 233/268 (86%)
 Strand = Plus / Minus

                                                                        
Query: 270  cactggtcgactggagctctgttgtcgcagtattgccgtcctcctcgagtaagagatctt 329
            |||| |||||||||||||| |||||| || ||||||||| |||||| ||||| |||||||
Sbjct: 2290 cactagtcgactggagctcagttgtcacattattgccgttctcctcaagtaaaagatctt 2231

                                                                        
Query: 330  ttcttgttatcagtcctacgacacgagaaggccgaggaacgacgaagatatgcctcaatc 389
             ||||||||| | ||| || |||||||||||||| ||||| || || ||||| | |||||
Sbjct: 2230 gtcttgttattaatccaacaacacgagaaggccgtggaacaacaaatatatgtcgcaatc 2171

                                                                        
Query: 390  ctagttggcggaagagattgtacacctttgccaaagacatgtcctctggcactatgtaag 449
            ||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||
Sbjct: 2170 ctagttggcggaagagattgtacacctttgctaaggacatgtcctctggcactatataag 2111

                                                                        
Query: 450  gagacggatttagaaatggggcaagatctaaatacaaaccaagttcctcatncgtcaaat 509
            |||| ||||||||||||||||| ||||| |||||||  || || || || |  |||||||
Sbjct: 2110 gagaaggatttagaaatggggcgagatccaaatacagccctagctcatcttctgtcaaat 2051

                                        
Query: 510  gaatatcatcaatcgacttccccttact 537
            ||||||||||||| ||||| || |||||
Sbjct: 2050 gaatatcatcaattgactttcctttact 2023
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  115 bits (58), Expect = 2e-22
 Identities = 108/125 (86%)
 Strand = Plus / Plus

                                                                            
Query: 413      acctttgccaaagacatgtcctctggcactatgtaaggagacggatttagaaatggggca 472
                |||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||| 
Sbjct: 27571666 acctttgctaaggacatgtcctctggcactatataaggagaaggatttagaaatggggcg 27571725

                                                                            
Query: 473      agatctaaatacaaaccaagttcctcatncgtcaaatgaatatcatcaatcgacttcccc 532
                ||||| |||||||  || || || || |  |||||||||||||||||||| ||||| || 
Sbjct: 27571726 agatccaaatacagccctagctcatcttctgtcaaatgaatatcatcaattgactttcct 27571785

                     
Query: 533      ttact 537
                |||||
Sbjct: 27571786 ttact 27571790



 Score =  105 bits (53), Expect = 1e-19
 Identities = 92/105 (87%)
 Strand = Plus / Plus

                                                                            
Query: 312      cctcgagtaagagatcttttcttgttatcagtcctacgacacgagaaggccgaggaacga 371
                |||| ||||| ||||||| ||||||||| | ||| || |||||||||||||| ||||| |
Sbjct: 27571467 cctcaagtaaaagatcttgtcttgttattaatccaacaacacgagaaggccgtggaacaa 27571526

                                                             
Query: 372      cgaagatatgcctcaatcctagttggcggaagagattgtacacct 416
                | || ||||| | ||||||||||||||||||||||||||||||||
Sbjct: 27571527 caaatatatgtcgcaatcctagttggcggaagagattgtacacct 27571571



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                                 
Query: 266      cttacactggtcgactggagctctgttgtcgcagtattgccgtcctcct 314
                |||||||| |||||||||||||| |||||| || ||||||||| |||||
Sbjct: 27571331 cttacactagtcgactggagctcagttgtcacattattgccgttctcct 27571379
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  115 bits (58), Expect = 2e-22
 Identities = 108/125 (86%)
 Strand = Plus / Plus

                                                                            
Query: 413      acctttgccaaagacatgtcctctggcactatgtaaggagacggatttagaaatggggca 472
                |||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||| 
Sbjct: 27662989 acctttgctaaggacatgtcctctggcactatataaggagaaggatttagaaatggggcg 27663048

                                                                            
Query: 473      agatctaaatacaaaccaagttcctcatncgtcaaatgaatatcatcaatcgacttcccc 532
                ||||| |||||||  || || || || |  |||||||||||||||||||| ||||| || 
Sbjct: 27663049 agatccaaatacagccctagctcatcttctgtcaaatgaatatcatcaattgactttcct 27663108

                     
Query: 533      ttact 537
                |||||
Sbjct: 27663109 ttact 27663113



 Score =  105 bits (53), Expect = 1e-19
 Identities = 92/105 (87%)
 Strand = Plus / Plus

                                                                            
Query: 312      cctcgagtaagagatcttttcttgttatcagtcctacgacacgagaaggccgaggaacga 371
                |||| ||||| ||||||| ||||||||| | ||| || |||||||||||||| ||||| |
Sbjct: 27662790 cctcaagtaaaagatcttgtcttgttattaatccaacaacacgagaaggccgtggaacaa 27662849

                                                             
Query: 372      cgaagatatgcctcaatcctagttggcggaagagattgtacacct 416
                | || ||||| | ||||||||||||||||||||||||||||||||
Sbjct: 27662850 caaatatatgtcgcaatcctagttggcggaagagattgtacacct 27662894



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                                 
Query: 266      cttacactggtcgactggagctctgttgtcgcagtattgccgtcctcct 314
                |||||||| |||||||||||||| |||||| || ||||||||| |||||
Sbjct: 27662654 cttacactagtcgactggagctcagttgtcacattattgccgttctcct 27662702
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>gb|AC123974.6| Oryza sativa chromosome 3 BAC OSJNBb0021P10 genomic sequence, complete
             sequence
          Length = 136982

 Score =  115 bits (58), Expect = 2e-22
 Identities = 108/125 (86%)
 Strand = Plus / Plus

                                                                         
Query: 413   acctttgccaaagacatgtcctctggcactatgtaaggagacggatttagaaatggggca 472
             |||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||| 
Sbjct: 13363 acctttgctaaggacatgtcctctggcactatataaggagaaggatttagaaatggggcg 13422

                                                                         
Query: 473   agatctaaatacaaaccaagttcctcatncgtcaaatgaatatcatcaatcgacttcccc 532
             ||||| |||||||  || || || || |  |||||||||||||||||||| ||||| || 
Sbjct: 13423 agatccaaatacagccctagctcatcttctgtcaaatgaatatcatcaattgactttcct 13482

                  
Query: 533   ttact 537
             |||||
Sbjct: 13483 ttact 13487



 Score =  105 bits (53), Expect = 1e-19
 Identities = 92/105 (87%)
 Strand = Plus / Plus

                                                                         
Query: 312   cctcgagtaagagatcttttcttgttatcagtcctacgacacgagaaggccgaggaacga 371
             |||| ||||| ||||||| ||||||||| | ||| || |||||||||||||| ||||| |
Sbjct: 13164 cctcaagtaaaagatcttgtcttgttattaatccaacaacacgagaaggccgtggaacaa 13223

                                                          
Query: 372   cgaagatatgcctcaatcctagttggcggaagagattgtacacct 416
             | || ||||| | ||||||||||||||||||||||||||||||||
Sbjct: 13224 caaatatatgtcgcaatcctagttggcggaagagattgtacacct 13268



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                              
Query: 266   cttacactggtcgactggagctctgttgtcgcagtattgccgtcctcct 314
             |||||||| |||||||||||||| |||||| || ||||||||| |||||
Sbjct: 13028 cttacactagtcgactggagctcagttgtcacattattgccgttctcct 13076
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>ref|NM_122525.2| Arabidopsis thaliana CLC-D; anion channel/ voltage-gated chloride
            channel AT5G26240 (CLC-D) mRNA, complete cds
          Length = 2861

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 106/130 (81%)
 Strand = Plus / Minus

                                                                        
Query: 350  acacgagaaggccgaggaacgacgaagatatgcctcaatcctagttggcggaagagattg 409
            ||||| ||||| || ||||| ||||| | ||| | ||| || ||||| ||||| ||||||
Sbjct: 2320 acacgggaaggacggggaacaacgaatagatgtcgcaacccaagttgccggaaaagattg 2261

                                                                        
Query: 410  tacacctttgccaaagacatgtcctctggcactatgtaaggagacggatttagaaatggg 469
            || ||||||| ||| |||||||| || || || | ||| ||||||||||| | |||||| 
Sbjct: 2260 tatacctttgtcaaggacatgtcttcgggaacaacgtatggagacggattcaaaaatgga 2201

                      
Query: 470  gcaagatcta 479
            ||||||||||
Sbjct: 2200 gcaagatcta 2191
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>dbj|AK117364.1| Arabidopsis thaliana At5g26240 mRNA for putative CLC-d chloride
            channel protein, complete cds, clone: RAFL16-93-G11
          Length = 2771

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 106/130 (81%)
 Strand = Plus / Minus

                                                                        
Query: 350  acacgagaaggccgaggaacgacgaagatatgcctcaatcctagttggcggaagagattg 409
            ||||| ||||| || ||||| ||||| | ||| | ||| || ||||| ||||| ||||||
Sbjct: 2304 acacgggaaggacggggaacaacgaatagatgtcgcaacccaagttgccggaaaagattg 2245

                                                                        
Query: 410  tacacctttgccaaagacatgtcctctggcactatgtaaggagacggatttagaaatggg 469
            || ||||||| ||| |||||||| || || || | ||| ||||||||||| | |||||| 
Sbjct: 2244 tatacctttgtcaaggacatgtcttcgggaacaacgtatggagacggattcaaaaatgga 2185

                      
Query: 470  gcaagatcta 479
            ||||||||||
Sbjct: 2184 gcaagatcta 2175
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>emb|Z71450.1|ATCLCD A.thaliana mRNA for CLC-d chloride channel protein
          Length = 2861

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 106/130 (81%)
 Strand = Plus / Minus

                                                                        
Query: 350  acacgagaaggccgaggaacgacgaagatatgcctcaatcctagttggcggaagagattg 409
            ||||| ||||| || ||||| ||||| | ||| | ||| || ||||| ||||| ||||||
Sbjct: 2320 acacgggaaggacggggaacaacgaatagatgtcgcaacccaagttgccggaaaagattg 2261

                                                                        
Query: 410  tacacctttgccaaagacatgtcctctggcactatgtaaggagacggatttagaaatggg 469
            || ||||||| ||| |||||||| || || || | ||| ||||||||||| | |||||| 
Sbjct: 2260 tatacctttgtcaaggacatgtcttcgggaacaacgtatggagacggattcaaaaatgga 2201

                      
Query: 470  gcaagatcta 479
            ||||||||||
Sbjct: 2200 gcaagatcta 2191
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>gb|AC005965.1| Arabidopsis thaliana BAC T19G15, from chromosome V near 60.5 cM,
             complete sequence
          Length = 77036

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                         
Query: 412   cacctttgccaaagacatgtcctctggcactatgtaaggagacggatttagaaatggggc 471
             |||||||| ||| |||||||| || || || | ||| ||||||||||| | |||||| ||
Sbjct: 49322 cacctttgtcaaggacatgtcttcgggaacaacgtatggagacggattcaaaaatggagc 49263

                     
Query: 472   aagatcta 479
             ||||||||
Sbjct: 49262 aagatcta 49255
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>emb|CR932964.2| Medicago truncatula chromosome 5 clone mte1-60l18, COMPLETE SEQUENCE
          Length = 93777

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 75/92 (81%)
 Strand = Plus / Minus

                                                                         
Query: 325   atcttttcttgttatcagtcctacgacacgagaaggccgaggaacgacgaagatatgcct 384
             ||||||||| |||||||  || |  ||||| || || |||||||| || || | ||||||
Sbjct: 85231 atcttttctggttatcaagccaagaacacgtgacgggcgaggaacaacaaataaatgcct 85172

                                             
Query: 385   caatcctagttggcggaagagattgtacacct 416
             ||| || ||||||||||| |||||||| ||||
Sbjct: 85171 caaaccaagttggcggaaaagattgtatacct 85140
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>gb|AF077407.1|F9D12 Arabidopsis thaliana BAC F9D12
          Length = 112253

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                         
Query: 412   cacctttgccaaagacatgtcctctggcactatgtaaggagacggatttagaaatggggc 471
             |||||||| ||| |||||||| || || || | ||| ||||||||||| | |||||| ||
Sbjct: 38073 cacctttgtcaaggacatgtcttcgggaacaacgtatggagacggattcaaaaatggagc 38014

                     
Query: 472   aagatcta 479
             ||||||||
Sbjct: 38013 aagatcta 38006
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>emb|BX936291.25| Zebrafish DNA sequence from clone DKEY-250A11 in linkage group 13,
             complete sequence
          Length = 195395

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 171   ttcttctatgtatttactgctc 192
             ||||||||||||||||||||||
Sbjct: 46559 ttcttctatgtatttactgctc 46538
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>ref|NM_001982.2| Homo sapiens v-erb-b2 erythroblastic leukemia viral oncogene homolog
            3 (avian) (ERBB3), transcript variant 1, mRNA
          Length = 5511

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 196  catcagactgtcaagaagagga 217
            ||||||||||||||||||||||
Sbjct: 4589 catcagactgtcaagaagagga 4610
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>gb|BC082992.1| Homo sapiens v-erb-b2 erythroblastic leukemia viral oncogene homolog
            3 (avian), transcript variant 1, mRNA (cDNA clone
            MGC:88033 IMAGE:6147464), complete cds
          Length = 4922

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 196  catcagactgtcaagaagagga 217
            ||||||||||||||||||||||
Sbjct: 4511 catcagactgtcaagaagagga 4532
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>gb|BC041579.1| Homo sapiens v-erb-b2 erythroblastic leukemia viral oncogene homolog
            3 (avian), mRNA (cDNA clone IMAGE:4645144)
          Length = 2730

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 196  catcagactgtcaagaagagga 217
            ||||||||||||||||||||||
Sbjct: 2317 catcagactgtcaagaagagga 2338
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>gb|BC002706.2| Homo sapiens v-erb-b2 erythroblastic leukemia viral oncogene homolog
            3 (avian), mRNA (cDNA clone IMAGE:3629646), complete cds
          Length = 2755

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 196  catcagactgtcaagaagagga 217
            ||||||||||||||||||||||
Sbjct: 2343 catcagactgtcaagaagagga 2364
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>emb|CR858836.1| Pongo pygmaeus mRNA; cDNA DKFZp469G124 (from clone DKFZp469G124)
          Length = 5120

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 196  catcagactgtcaagaagagga 217
            ||||||||||||||||||||||
Sbjct: 4590 catcagactgtcaagaagagga 4611
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>dbj|AK125028.1| Homo sapiens cDNA FLJ43038 fis, clone BRTHA3002955, highly  similar
            to ERBB-3 RECEPTOR PROTEIN-TYROSINE KINASE PRECURSOR (EC
            2.7.1.112)
          Length = 3293

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 196  catcagactgtcaagaagagga 217
            ||||||||||||||||||||||
Sbjct: 2214 catcagactgtcaagaagagga 2235
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>dbj|AK124710.1| Homo sapiens cDNA FLJ42720 fis, clone BRAMY4000095, highly  similar
            to ERBB-3 receptor protein-tyrosine kinase precursor (EC
            2.7.1.112)
          Length = 3238

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 196  catcagactgtcaagaagagga 217
            ||||||||||||||||||||||
Sbjct: 2854 catcagactgtcaagaagagga 2875
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>gb|AC034102.32| Homo sapiens 12 BAC RP11-603J24 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 192203

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 196   catcagactgtcaagaagagga 217
             ||||||||||||||||||||||
Sbjct: 58877 catcagactgtcaagaagagga 58856
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>emb|AL954847.17| Zebrafish DNA sequence from clone DKEY-68G8 in linkage group 13, complete
              sequence
          Length = 278040

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 171    ttcttctatgtatttactgctc 192
              ||||||||||||||||||||||
Sbjct: 169577 ttcttctatgtatttactgctc 169598
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>gb|M34309.1|HUMHER3A Human epidermal growth factor receptor (HER3) mRNA, complete cds
          Length = 4975

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 196  catcagactgtcaagaagagga 217
            ||||||||||||||||||||||
Sbjct: 4594 catcagactgtcaagaagagga 4615
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>gb|M29366.1|HUMEGFRBB3 Human epidermal growth factor receptor (ERBB3) mRNA, complete cds
          Length = 4879

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 196  catcagactgtcaagaagagga 217
            ||||||||||||||||||||||
Sbjct: 4495 catcagactgtcaagaagagga 4516
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>emb|AL162373.16| Human DNA sequence from clone RP11-272M24 on chromosome 13 Contains a
              novel pseudogene, complete sequence
          Length = 176797

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 142    ttatcaaaattgtcttttgag 162
              |||||||||||||||||||||
Sbjct: 137295 ttatcaaaattgtcttttgag 137275
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>emb|AL449063.13| Human DNA sequence from clone RP11-413P11 on chromosome 1 Contains a
             novel gene, complete sequence
          Length = 125422

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 157   tttgagacatcttgttcttctatg 180
             ||||||| ||||||||||||||||
Sbjct: 57937 tttgagaaatcttgttcttctatg 57914
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>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 104     ttggtttgtgtaccattcag 123
               ||||||||||||||||||||
Sbjct: 4608433 ttggtttgtgtaccattcag 4608452
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>gb|AC093559.2| Homo sapiens chromosome 1 clone RP11-138K16, complete sequence
          Length = 175909

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 157   tttgagacatcttgttcttctatg 180
             ||||||| ||||||||||||||||
Sbjct: 40003 tttgagaaatcttgttcttctatg 39980
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>emb|BX284616.13| Zebrafish DNA sequence from clone DKEY-192I20 in linkage group 19,
             complete sequence
          Length = 223573

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 133   aactgcttgttatcaaaattgtct 156
             |||||||||||||||||| |||||
Sbjct: 92833 aactgcttgttatcaaaaatgtct 92810
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 160      gagacatcttgttcttctat 179
                ||||||||||||||||||||
Sbjct: 28538055 gagacatcttgttcttctat 28538036
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>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 104     ttggtttgtgtaccattcag 123
               ||||||||||||||||||||
Sbjct: 4684472 ttggtttgtgtaccattcag 4684491
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>dbj|AP006268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0037D09
          Length = 140470

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 160    gagacatcttgttcttctat 179
              ||||||||||||||||||||
Sbjct: 103807 gagacatcttgttcttctat 103788
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>dbj|AP003817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1167_G06
          Length = 112386

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 160  gagacatcttgttcttctat 179
            ||||||||||||||||||||
Sbjct: 4013 gagacatcttgttcttctat 3994
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>dbj|AP004343.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0618H09
          Length = 142306

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   gagacatcttgttcttctat 179
             ||||||||||||||||||||
Sbjct: 95596 gagacatcttgttcttctat 95577
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>emb|AL929290.5| Zebrafish DNA sequence from clone CH211-67N1, complete sequence
          Length = 168517

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 502   cgtcaaatgaatatcatcaa 521
             ||||||||||||||||||||
Sbjct: 64477 cgtcaaatgaatatcatcaa 64458
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>gb|AF146687.1|FRNINE1 Fugu rubripes U2 small nuclear ribonucleoprotein auxiliary factor
             subunit-related protein (U2AF1-RS2), 19 kDa Golgi adaptor
             protein adaptin (AP19), and phosphorylase kinase alpha 2
             subunit (PHKA2) genes, complete cds; kelch protein
             (KELCH1) and kelch protein (KELCH2) genes, partial cds;
             and protein phosphatase 1 (PPEF-1), X-linked juvenile
             retinoschisis precursor protein (XLRS1), and
             serine-threonine kinase 9 (STK9) genes, complete cds
          Length = 62576

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 145   tcaaaattgtcttttgagacatct 168
             ||||| ||||||||||||||||||
Sbjct: 16359 tcaaacttgtcttttgagacatct 16336
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>emb|BX293540.5| Zebrafish DNA sequence from clone DKEY-255N2 in linkage group 8, complete
              sequence
          Length = 181168

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 133    aactgcttgttatcaaaattgtct 156
              |||||||||||||||||| |||||
Sbjct: 134867 aactgcttgttatcaaaaatgtct 134890
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>emb|AL953905.8| Zebrafish DNA sequence from clone CH211-79L10, complete sequence
          Length = 163506

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 502    cgtcaaatgaatatcatcaa 521
              ||||||||||||||||||||
Sbjct: 157535 cgtcaaatgaatatcatcaa 157516


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,332,612
Number of Sequences: 3902068
Number of extensions: 4332612
Number of successful extensions: 69681
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69530
Number of HSP's gapped (non-prelim): 146
length of query: 543
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 520
effective length of database: 17,143,297,704
effective search space: 8914514806080
effective search space used: 8914514806080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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