ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal19b15 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF118149.1|AF118149 Secale cereale ribosomal protein S7 mRNA, complete cds Length = 819 Score = 829 bits (418), Expect = 0.0 Identities = 536/574 (93%), Gaps = 6/574 (1%) Strand = Plus / Minus Query: 2 aattttgattttttgagtacatgatccaaataacaaagagctcaagcaagcggttgcata 61 ||||||||||||| | |||||||||||| |||||| ||| |||||||| ||| ||| | Sbjct: 718 aattttgatttttcaaatacatgatccaagtaacaacgagatcaagcaa--ggtcgcaaa 661 Query: 62 ttcaatacatgaacaagagagccagccaatatgcaaatcaagaaggatcttcaagcagtt 121 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| Sbjct: 660 ttcaatacatgaacaagag----ggccaatatgcaaatcaagatggatcttcaagcagtt 605 Query: 122 tcagcaacggggtactcgtataccacatccttgccacaaagcctgcggtacactgaagtg 181 || ||||| || ||||| || |||||||| ||||||||||||||||||||||||| |||| Sbjct: 604 tcggcaaccggatactcatacaccacatctttgccacaaagcctgcggtacactgcagtg 545 Query: 182 aaggtatccaacttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatg 241 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 544 aaggtatccaacttgtactctgtgttgttgcgttccattgggtccaagaagatcttaatg 485 Query: 242 attttcgagccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaaca 301 || ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 484 atcttcgagccatctagacgatatctgacacgtttccccacaatctcagctgggtacaca 425 Query: 302 acatcctccaaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaaca 361 |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 424 acatcctccaaaaggccatcatgaacagcagtcaaagttctggtacgagggcgaacaaca 365 Query: 362 gcagaaccttttttgggtggcctcacaatccgccttgttgcaacaataacaacgtccttg 421 |||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 364 gcagaacccttcttgggtggcctcacaatccgccttgtagcaacaataacaacgtccttg 305 Query: 422 ccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaaggacttg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 304 ccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaagttcttg 245 Query: 482 cggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatccatctgg 541 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 cggagcctatacggcacgtggatgaccacggccttcctgttccctgcaacatccatctgg 185 Query: 542 aaggcggcgttgatgtagaggtctttgacgtcgc 575 |||||||||||||||||||||||||| ||||||| Sbjct: 184 aaggcggcgttgatgtagaggtctttaacgtcgc 151
>gb|AY846832.1| Triticum aestivum ribosomal protein S7 mRNA, complete cds Length = 600 Score = 375 bits (189), Expect = e-100 Identities = 363/421 (86%) Strand = Plus / Minus Query: 155 ccacaaagcctgcggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgt 214 ||||||||||||||||| |||| || |||||| |||| ||||||||| ||||||||||| Sbjct: 553 ccacaaagcctgcggtagactgcagagaaggtctccagcttgtactcagtgttgttgcgc 494 Query: 215 tcctttgggtccaagaagatcttgatgattttcgagccatcaagacgatatctgacacgt 274 ||||| ||||||||| |||||||||||| || | ||||| | ||| || |||||||| Sbjct: 493 tccttcgggtccaagtagatcttgatgaccttggcaccatccaaacggtacctgacacgc 434 Query: 275 ttccccacaatctcagctgggtaaacaacatcctccaaaagaccatcatgaacagcagtc 334 ||||||||||||||||||||||| |||||||||||||| | ||||||||||||||| ||| Sbjct: 433 ttccccacaatctcagctgggtacacaacatcctccaagataccatcatgaacagctgtc 374 Query: 335 aaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggcctcacaatccgc 394 | || || || |||||||| |||||||||||| || |||||||||||||| |||| Sbjct: 373 agggtcctggtgcgagggcgctgaacagcagaacccttcttgggtggcctcacgatcctt 314 Query: 395 cttgttgcaacaataacaacgtccttgccgctgaacttcttctcgagctccctgacgagc 454 ||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 313 cttgttgcaacaaagacaacatccttgccgctaaacttcttctcgagctccctgacgagc 254 Query: 455 ctgacgtggatcttcctgaaggacttgcggagcctgtacgggacgtggatgaccacggcc 514 ||||| |||||||||||||||| |||||| || | ||| || || ||||| ||||||||| Sbjct: 253 ctgacatggatcttcctgaagggcttgcgcagacggtatggcacatggatcaccacggcc 194 Query: 515 ttcctgttccctgcaacatccatctggaaggcggcgttgatgtagaggtctttgacgtcg 574 ||||||||||| ||||||||||||||| || | ||||||||| ||||| |||| |||| Sbjct: 193 ttcctgttcccaacaacatccatctggattgcagtgttgatgtacaggtccttgaggtcg 134 Query: 575 c 575 | Sbjct: 133 c 133
>gb|BT016582.1| Zea mays clone Contig415 mRNA sequence Length = 907 Score = 359 bits (181), Expect = 7e-96 Identities = 370/433 (85%) Strand = Plus / Minus Query: 143 accacatccttgccacaaagcctgcggtacactgaagtgaaggtatccaacttgtactct 202 |||||||| || ||||| ||||||||||| || | |||| |||| |||| |||||| || Sbjct: 653 accacatctttcccacacagcctgcggtagaccgcagtgcaggtctccagcttgtattca 594 Query: 203 gtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagccatcaagacga 262 |||||||| | ||||||||||||||||| |||||||| || || || ||||| ||||| Sbjct: 593 gtgttgttcctctcctttgggtccaagaaaatcttgataatcttggaaccatccagacgg 534 Query: 263 tatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaaaagaccatca 322 ||||||||||| ||||||||||||||||||||||| |||||||||||||| | ||||| Sbjct: 533 tatctgacacgcttccccacaatctcagctgggtagacaacatcctccaagatgccatcg 474 Query: 323 tgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggc 382 ||||||||||||| ||| || || |||||||| | |||||| ||||| || ||||||||| Sbjct: 473 tgaacagcagtcagagtcctggtgcgagggcgcagaacagctgaacccttcttgggtggc 414 Query: 383 ctcacaatccgccttgttgcaacaataacaacgtccttgccgctgaacttcttctcgagc 442 |||||||||| |||||| |||||||| || || |||||||||||||| |||||||| ||| Sbjct: 413 ctcacaatcctccttgtagcaacaattaccacatccttgccgctgaatttcttctccagc 354 Query: 443 tccctgacgagcctgacgtggatcttcctgaaggacttgcggagcctgtacgggacgtgg 502 ||||||||||| ||||| |||||||||||||||| |||||| || | ||| ||||||||| Sbjct: 353 tccctgacgagtctgacatggatcttcctgaaggccttgcgcaggcggtatgggacgtgg 294 Query: 503 atgaccacggccttcctgttccctgcaacatccatctggaaggcggcgttgatgtagagg 562 ||||| || ||||||||| |||| | |||||||||||||| || ||||||||| ||| Sbjct: 293 atgacaacagccttcctgctcccggtaacatccatctggatagcattgttgatgtacagg 234 Query: 563 tctttgacgtcgc 575 || |||| ||||| Sbjct: 233 tccttgaggtcgc 221
>gb|AY103554.1| Zea mays PCO154340 mRNA sequence Length = 1075 Score = 359 bits (181), Expect = 7e-96 Identities = 370/433 (85%) Strand = Plus / Minus Query: 143 accacatccttgccacaaagcctgcggtacactgaagtgaaggtatccaacttgtactct 202 |||||||| || ||||| ||||||||||| || | |||| |||| |||| |||||| || Sbjct: 692 accacatctttcccacacagcctgcggtagaccgcagtgcaggtctccagcttgtattca 633 Query: 203 gtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagccatcaagacga 262 |||||||| | ||||||||||||||||| |||||||| || || || ||||| ||||| Sbjct: 632 gtgttgttcctctcctttgggtccaagaaaatcttgataatcttggaaccatccagacgg 573 Query: 263 tatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaaaagaccatca 322 ||||||||||| ||||||||||||||||||||||| |||||||||||||| | ||||| Sbjct: 572 tatctgacacgcttccccacaatctcagctgggtagacaacatcctccaagatgccatcg 513 Query: 323 tgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggc 382 ||||||||||||| ||| || || |||||||| | |||||| ||||| || ||||||||| Sbjct: 512 tgaacagcagtcagagtcctggtgcgagggcgcagaacagctgaacccttcttgggtggc 453 Query: 383 ctcacaatccgccttgttgcaacaataacaacgtccttgccgctgaacttcttctcgagc 442 |||||||||| |||||| |||||||| || || |||||||||||||| |||||||| ||| Sbjct: 452 ctcacaatcctccttgtagcaacaattaccacatccttgccgctgaatttcttctccagc 393 Query: 443 tccctgacgagcctgacgtggatcttcctgaaggacttgcggagcctgtacgggacgtgg 502 ||||||||||| ||||| |||||||||||||||| |||||| || | ||| ||||||||| Sbjct: 392 tccctgacgagtctgacatggatcttcctgaaggccttgcgcaggcggtatgggacgtgg 333 Query: 503 atgaccacggccttcctgttccctgcaacatccatctggaaggcggcgttgatgtagagg 562 ||||| || ||||||||| |||| | |||||||||||||| || ||||||||| ||| Sbjct: 332 atgacaacagccttcctgctcccggtaacatccatctggatagcattgttgatgtacagg 273 Query: 563 tctttgacgtcgc 575 || |||| ||||| Sbjct: 272 tccttgaggtcgc 260
>emb|AJ315794.1|HVU315794 Hordeum vulgare mRNA for Ribosomal protein S7 (rps7 gene) Length = 852 Score = 355 bits (179), Expect = 1e-94 Identities = 360/418 (86%), Gaps = 3/418 (0%) Strand = Plus / Minus Query: 158 caaagcctgcggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcc 217 |||||||||||||| |||| || |||||| |||| |||||| || ||||||||||| ||| Sbjct: 596 caaagcctgcggtagactgcagagaaggtctccagcttgtattcagtgttgttgcgctcc 537 Query: 218 tttgggtccaagaagatcttgatgattttcgagccatcaagacgatatctgacacgtttc 277 |||||||||||| |||||||||||| || | ||||| | ||| || ||||| || ||| Sbjct: 536 tttgggtccaagtagatcttgatgaccttggcaccatccaaacggtacctgacgcgcttc 477 Query: 278 cccacaatctcagctgggtaaacaacatcctccaaaagaccatcatgaacagcagtcaaa 337 |||||||||||||||||||| |||||||||||||| | ||||||||||||||| |||| Sbjct: 476 cccacaatctcagctgggtacacaacatcctccaagataccatcatgaacagctgtcagg 417 Query: 338 gttcttgtacgagggcgaacaacagcagaaccttttttgggtggcctcacaatccgcctt 397 ||||| || |||||||| |||||||||||| || ||||||||||||||||||| ||| Sbjct: 416 gttctggtgcgagggcgctgaacagcagaacccttcttgggtggcctcacaatccttctt 357 Query: 398 gttgcaacaataacaacgtccttgccgctgaacttcttctcgagctccctgacgagcctg 457 |||||||||| ||||| ||||||||||| |||| ||||||||||||||||||||||| Sbjct: 356 gttgcaacaaagacaacatccttgccgct-aact--ctctcgagctccctgacgagcctg 300 Query: 458 acgtggatcttcctgaaggacttgcggagcctgtacgggacgtggatgaccacggccttc 517 || |||||||||||||||| ||||||||| | |||||| || ||||| |||||||||||| Sbjct: 299 acatggatcttcctgaagggcttgcggagacggtacggcacatggatcaccacggccttc 240 Query: 518 ctgttccctgcaacatccatctggaaggcggcgttgatgtagaggtctttgacgtcgc 575 |||||||| ||||||||||||||| || | ||||||||| ||||| |||| ||||| Sbjct: 239 ctgttcccaacaacatccatctggatcgcagtgttgatgtacaggtccttgaggtcgc 182
>dbj|AK122143.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136J20, full insert sequence Length = 966 Score = 315 bits (159), Expect = 9e-83 Identities = 366/435 (84%) Strand = Plus / Minus Query: 108 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 167 |||||||||||||||||| | |||||||| | | ||||| || ||||||||||||| Sbjct: 655 atcttcaagcagtttcagtcatagggtactcaaaggcaacatctttcccacaaagcctgc 596 Query: 168 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 227 |||| || | | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 595 ggtagaccgcggagaaggtctcgagcttgtattcggtattgttgcgctcctttgggtcca 536 Query: 228 agaagatcttgatgattttcgagccatcaagacgatatctgacacgtttccccacaatct 287 |||| |||||||||| || | ||||| ||||| ||||||| || || || ||||||| Sbjct: 535 agaaaatcttgatgaccttggcaccatccagacggtatctgatgcgcttgccaacaatct 476 Query: 288 cagctgggtaaacaacatcctccaaaagaccatcatgaacagcagtcaaagttcttgtac 347 |||||||||| || ||||||||||| | |||||||||||||||||| | ||||||||| | Sbjct: 475 cagctgggtagactacatcctccaagataccatcatgaacagcagtaagagttcttgtgc 416 Query: 348 gagggcgaacaacagcagaaccttttttgggtggcctcacaatccgccttgttgcaacaa 407 ||||||| |||||| || || || ||||| ||||||||||||| |||||||||||||| Sbjct: 415 gagggcgctgaacagccgagcccttcttgggaggcctcacaatcctccttgttgcaacaa 356 Query: 408 taacaacgtccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatct 467 | || || ||||||||||||||||||||||||||||||||||| |||||||| ||||| | Sbjct: 355 ttaccacatccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattt 296 Query: 468 tcctgaaggacttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctg 527 || |||| | |||||| || | |||||| |||||||| ||||| |||||||||||||| | Sbjct: 295 tcttgaatgccttgcgcagacggtacggcacgtggatcaccacagccttcctgttcccgg 236 Query: 528 caacatccatctgga 542 ||| ||||||||||| Sbjct: 235 caatatccatctgga 221
>dbj|AK059192.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-H09, full insert sequence Length = 830 Score = 315 bits (159), Expect = 9e-83 Identities = 366/435 (84%) Strand = Plus / Minus Query: 108 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 167 |||||||||||||||||| | |||||||| | | ||||| || ||||||||||||| Sbjct: 654 atcttcaagcagtttcagtcatagggtactcaaaggcaacatctttcccacaaagcctgc 595 Query: 168 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 227 |||| || | | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 594 ggtagaccgcggagaaggtctcgagcttgtattcggtattgttgcgctcctttgggtcca 535 Query: 228 agaagatcttgatgattttcgagccatcaagacgatatctgacacgtttccccacaatct 287 |||| |||||||||| || | ||||| ||||| ||||||| || || || ||||||| Sbjct: 534 agaaaatcttgatgaccttggcaccatccagacggtatctgatgcgcttgccaacaatct 475 Query: 288 cagctgggtaaacaacatcctccaaaagaccatcatgaacagcagtcaaagttcttgtac 347 |||||||||| || ||||||||||| | |||||||||||||||||| | ||||||||| | Sbjct: 474 cagctgggtagactacatcctccaagataccatcatgaacagcagtaagagttcttgtgc 415 Query: 348 gagggcgaacaacagcagaaccttttttgggtggcctcacaatccgccttgttgcaacaa 407 ||||||| |||||| || || || ||||| ||||||||||||| |||||||||||||| Sbjct: 414 gagggcgctgaacagccgagcccttcttgggaggcctcacaatcctccttgttgcaacaa 355 Query: 408 taacaacgtccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatct 467 | || || ||||||||||||||||||||||||||||||||||| |||||||| ||||| | Sbjct: 354 ttaccacatccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattt 295 Query: 468 tcctgaaggacttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctg 527 || |||| | |||||| || | |||||| |||||||| ||||| |||||||||||||| | Sbjct: 294 tcttgaatgccttgcgcagacggtacggcacgtggatcaccacagccttcctgttcccgg 235 Query: 528 caacatccatctgga 542 ||| ||||||||||| Sbjct: 234 caatatccatctgga 220
>gb|BT017481.1| Zea mays clone EL01N0409H01.c mRNA sequence Length = 840 Score = 224 bits (113), Expect = 2e-55 Identities = 353/433 (81%) Strand = Plus / Minus Query: 143 accacatccttgccacaaagcctgcggtacactgaagtgaaggtatccaacttgtactct 202 |||||||| || ||||| ||||||||||| || | | || ||| |||| |||||| || Sbjct: 616 accacatctttcccacacagcctgcggtagaccgcaatgcagggctccagcttgtattca 557 Query: 203 gtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagccatcaagacga 262 | |||||| | ||||||||||||||||| |||||||| || || || ||||| | ||| Sbjct: 556 gagttgttcctctcctttgggtccaagaaaatcttgataatcttggacccatccacacgg 497 Query: 263 tatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaaaagaccatca 322 ||| ||||| | |||||| ||||||||| |||||| |||||||||||||||| ||||| Sbjct: 496 tatgtgacatgcttcccctcaatctcagttgggtagacaacatcctccaaaatgccatcg 437 Query: 323 tgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggc 382 ||||||||||||| ||| || || | |||||| | |||||| || || || |||||| | Sbjct: 436 tgaacagcagtcacagtcctggtcctagggcgcagaacagctgaccccttcgtgggtgcc 377 Query: 383 ctcacaatccgccttgttgcaacaataacaacgtccttgccgctgaacttcttctcgagc 442 |||||||||| |||||| |||||||| || || ||||| ||| |||| |||||||| ||| Sbjct: 376 ctcacaatcccccttgtagcaacaattaccacatccttcccgatgaatttcttctccagc 317 Query: 443 tccctgacgagcctgacgtggatcttcctgaaggacttgcggagcctgtacgggacgtgg 502 ||||||| ||| ||||| ||||||||||||||| |||||| || | ||| ||||||||| Sbjct: 316 tccctgaagagtctgacatggatcttcctgaagcccttgcgcagacggtatgggacgtgg 257 Query: 503 atgaccacggccttcctgttccctgcaacatccatctggaaggcggcgttgatgtagagg 562 ||||| | |||||||| |||| | |||||||||||||| || ||||||||| ||| Sbjct: 256 atgacatcacccttcctgctcccggtaacatccatctggatagcattgttgatgtacagg 197 Query: 563 tctttgacgtcgc 575 || |||| ||||| Sbjct: 196 tccttgaggtcgc 184
>gb|AF529175.1| Oryza sativa (japonica cultivar-group) ribosomal protein S7 (RPS7) mRNA, complete cds Length = 919 Score = 153 bits (77), Expect = 8e-34 Identities = 227/277 (81%) Strand = Plus / Minus Query: 193 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 252 ||||||||| ||||||||||| ||||||||||||| ||||||||| |||||||| || Sbjct: 600 cttgtactcggtgttgttgcgctcctttgggtccaggaagatcttcatgatttttctacc 541 Query: 253 atcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaa 312 ||| | | ||||||||||| ||||| |||||||| ||||| || |||||||||||||| Sbjct: 540 atccaagtggtatctgacacgcttcccaacaatctctgctggatacacaacatcctccaa 481 Query: 313 aagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttt 372 | ||||||||||||||||| | || | |||||||||||||||||||| || ||||| Sbjct: 480 gatgccatcatgaacagcagtaagtgtgcgggtacgagggcgaacaacagctgagccttt 421 Query: 373 tttgggtggcctcacaatccgccttgttgcaacaataacaacgtccttgccgctgaactt 432 || || |||||||| || | || |||||||| | ||| || ||||| || ||||| || Sbjct: 420 ctttgggggcctcactattcttctagttgcaaccagaaccacatccttcccactgaattt 361 Query: 433 cttctcgagctccctgacgagcctgacgtggatcttc 469 |||||| || ||||| || ||||| || ||||||||| Sbjct: 360 cttctcaagttccctaacaagcctcacatggatcttc 324
>dbj|AK104191.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-C09, full insert sequence Length = 910 Score = 153 bits (77), Expect = 8e-34 Identities = 227/277 (81%) Strand = Plus / Minus Query: 193 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 252 ||||||||| ||||||||||| ||||||||||||| ||||||||| |||||||| || Sbjct: 611 cttgtactcggtgttgttgcgctcctttgggtccaggaagatcttcatgatttttctacc 552 Query: 253 atcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaa 312 ||| | | ||||||||||| ||||| |||||||| ||||| || |||||||||||||| Sbjct: 551 atccaagtggtatctgacacgcttcccaacaatctctgctggatacacaacatcctccaa 492 Query: 313 aagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttt 372 | ||||||||||||||||| | || | |||||||||||||||||||| || ||||| Sbjct: 491 gatgccatcatgaacagcagtaagtgtgcgggtacgagggcgaacaacagctgagccttt 432 Query: 373 tttgggtggcctcacaatccgccttgttgcaacaataacaacgtccttgccgctgaactt 432 || || |||||||| || | || |||||||| | ||| || ||||| || ||||| || Sbjct: 431 ctttgggggcctcactattcttctagttgcaaccagaaccacatccttcccactgaattt 372 Query: 433 cttctcgagctccctgacgagcctgacgtggatcttc 469 |||||| || ||||| || ||||| || ||||||||| Sbjct: 371 cttctcaagttccctaacaagcctcacatggatcttc 335
>dbj|AK061627.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-B02, full insert sequence Length = 910 Score = 153 bits (77), Expect = 8e-34 Identities = 227/277 (81%) Strand = Plus / Minus Query: 193 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 252 ||||||||| ||||||||||| ||||||||||||| ||||||||| |||||||| || Sbjct: 611 cttgtactcggtgttgttgcgctcctttgggtccaggaagatcttcatgatttttctacc 552 Query: 253 atcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaa 312 ||| | | ||||||||||| ||||| |||||||| ||||| || |||||||||||||| Sbjct: 551 atccaagtggtatctgacacgcttcccaacaatctctgctggatacacaacatcctccaa 492 Query: 313 aagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttt 372 | ||||||||||||||||| | || | |||||||||||||||||||| || ||||| Sbjct: 491 gatgccatcatgaacagcagtaagtgtgcgggtacgagggcgaacaacagctgagccttt 432 Query: 373 tttgggtggcctcacaatccgccttgttgcaacaataacaacgtccttgccgctgaactt 432 || || |||||||| || | || |||||||| | ||| || ||||| || ||||| || Sbjct: 431 ctttgggggcctcactattcttctagttgcaaccagaaccacatccttcccactgaattt 372 Query: 433 cttctcgagctccctgacgagcctgacgtggatcttc 469 |||||| || ||||| || ||||| || ||||||||| Sbjct: 371 cttctcaagttccctaacaagcctcacatggatcttc 335
>dbj|AK103081.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118F01, full insert sequence Length = 903 Score = 145 bits (73), Expect = 2e-31 Identities = 226/277 (81%) Strand = Plus / Minus Query: 193 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 252 ||||||||| ||||||||||| ||||||||||||| ||||||||| |||||||| || Sbjct: 611 cttgtactcggtgttgttgcgctcctttgggtccaggaagatcttcatgatttttctacc 552 Query: 253 atcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaa 312 | | | | ||||||||||| ||||| |||||||| ||||| || |||||||||||||| Sbjct: 551 acccaagtggtatctgacacgcttcccaacaatctctgctggatacacaacatcctccaa 492 Query: 313 aagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttt 372 | ||||||||||||||||| | || | |||||||||||||||||||| || ||||| Sbjct: 491 gatgccatcatgaacagcagtaagtgtgcgggtacgagggcgaacaacagctgagccttt 432 Query: 373 tttgggtggcctcacaatccgccttgttgcaacaataacaacgtccttgccgctgaactt 432 || || |||||||| || | || |||||||| | ||| || ||||| || ||||| || Sbjct: 431 ctttgggggcctcactattcttctagttgcaaccagaaccacatccttcccactgaattt 372 Query: 433 cttctcgagctccctgacgagcctgacgtggatcttc 469 |||||| || ||||| || ||||| || ||||||||| Sbjct: 371 cttctcaagttccctaacaagcctcacatggatcttc 335
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 137 bits (69), Expect = 4e-29 Identities = 111/125 (88%) Strand = Plus / Minus Query: 417 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaagg 476 |||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| | Sbjct: 10366335 ccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaatg 10366276 Query: 477 acttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcca 536 |||||| || | |||||| |||||||| ||||| |||||||||||||| |||| ||||| Sbjct: 10366275 ccttgcgcagacggtacggcacgtggatcaccacagccttcctgttcccggcaatatcca 10366216 Query: 537 tctgg 541 ||||| Sbjct: 10366215 tctgg 10366211 Score = 131 bits (66), Expect = 3e-27 Identities = 135/158 (85%) Strand = Plus / Minus Query: 251 ccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctcc 310 ||||| ||||| ||||||| || || || ||||||||||||||||| || ||||||||| Sbjct: 10367112 ccatccagacggtatctgatgcgcttgccaacaatctcagctgggtagactacatcctcc 10367053 Query: 311 aaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaacct 370 || | |||||||||||||||||| | ||||||||| |||||||| |||||| || || Sbjct: 10367052 aagataccatcatgaacagcagtaagagttcttgtgcgagggcgctgaacagccgagccc 10366993 Query: 371 tttttgggtggcctcacaatccgccttgttgcaacaat 408 || ||||| ||||||||||||| ||||||||||||||| Sbjct: 10366992 ttcttgggaggcctcacaatcctccttgttgcaacaat 10366955 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Minus Query: 417 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaagg 476 |||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| | Sbjct: 10370579 ccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaatg 10370520 Query: 477 acttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcca 536 |||||| || | |||||| ||||| || ||||| |||||||||||||| |||| ||||| Sbjct: 10370519 ccttgcgcagacggtacggcacgtgaatcaccacagccttcctgttcccggcaatatcca 10370460 Query: 537 tctgg 541 ||||| Sbjct: 10370459 tctgg 10370455 Score = 115 bits (58), Expect = 2e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 251 ccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctcc 310 ||||| ||||| ||||||| || || || ||||||||||||||||| || ||||||||| Sbjct: 10371367 ccatccagacggtatctgatgcgcttgccaacaatctcagctgggtagactacatcctcc 10371308 Query: 311 aaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaacct 370 || | || |||||||||||| || | ||||||||| |||||||| |||||| || || Sbjct: 10371307 aagatacaatcatgaacagcggtaagagttcttgtgcgagggcgctgaacagccgagccc 10371248 Query: 371 tttttgggtggcctcacaatccgccttgttgcaacaat 408 || ||||| ||||||||||||| ||||||||||||||| Sbjct: 10371247 ttcttgggaggcctcacaatcctccttgttgcaacaat 10371210 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Minus Query: 108 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 167 |||||||||||||||||| | ||||||||| | | ||||| || ||||||||||||| Sbjct: 10371759 atcttcaagcagtttcagtcatagggtactcgaaggcaacatctttcccacaaagcctgc 10371700 Query: 168 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 227 |||| |||| | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 10371699 ggtagactgcggagaaggtctcaagcttgtattcggtattgttgcgctcctttgggtcca 10371640 Query: 228 agaagatct 236 |||| |||| Sbjct: 10371639 agaaaatct 10371631 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Minus Query: 108 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 167 |||||||||||||||||| | |||||||| | | ||||| || ||||||||||||| Sbjct: 10367503 atcttcaagcagtttcagtcatagggtactcaaaggcaacatctttcccacaaagcctgc 10367444 Query: 168 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 227 |||| || | | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 10367443 ggtagaccgcggagaaggtctcgagcttgtattcggtattgttgcgctcctttgggtcca 10367384 Query: 228 agaagatct 236 |||| |||| Sbjct: 10367383 agaaaatct 10367375
>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0039F10, complete sequence Length = 139714 Score = 137 bits (69), Expect = 4e-29 Identities = 111/125 (88%) Strand = Plus / Minus Query: 417 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaagg 476 |||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| | Sbjct: 22888 ccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaatg 22829 Query: 477 acttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcca 536 |||||| || | |||||| |||||||| ||||| |||||||||||||| |||| ||||| Sbjct: 22828 ccttgcgcagacggtacggcacgtggatcaccacagccttcctgttcccggcaatatcca 22769 Query: 537 tctgg 541 ||||| Sbjct: 22768 tctgg 22764 Score = 131 bits (66), Expect = 3e-27 Identities = 135/158 (85%) Strand = Plus / Minus Query: 251 ccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctcc 310 ||||| ||||| ||||||| || || || ||||||||||||||||| || ||||||||| Sbjct: 23665 ccatccagacggtatctgatgcgcttgccaacaatctcagctgggtagactacatcctcc 23606 Query: 311 aaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaacct 370 || | |||||||||||||||||| | ||||||||| |||||||| |||||| || || Sbjct: 23605 aagataccatcatgaacagcagtaagagttcttgtgcgagggcgctgaacagccgagccc 23546 Query: 371 tttttgggtggcctcacaatccgccttgttgcaacaat 408 || ||||| ||||||||||||| ||||||||||||||| Sbjct: 23545 ttcttgggaggcctcacaatcctccttgttgcaacaat 23508 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Minus Query: 417 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaagg 476 |||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| | Sbjct: 27132 ccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaatg 27073 Query: 477 acttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcca 536 |||||| || | |||||| ||||| || ||||| |||||||||||||| |||| ||||| Sbjct: 27072 ccttgcgcagacggtacggcacgtgaatcaccacagccttcctgttcccggcaatatcca 27013 Query: 537 tctgg 541 ||||| Sbjct: 27012 tctgg 27008 Score = 115 bits (58), Expect = 2e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 251 ccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctcc 310 ||||| ||||| ||||||| || || || ||||||||||||||||| || ||||||||| Sbjct: 27920 ccatccagacggtatctgatgcgcttgccaacaatctcagctgggtagactacatcctcc 27861 Query: 311 aaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaacct 370 || | || |||||||||||| || | ||||||||| |||||||| |||||| || || Sbjct: 27860 aagatacaatcatgaacagcggtaagagttcttgtgcgagggcgctgaacagccgagccc 27801 Query: 371 tttttgggtggcctcacaatccgccttgttgcaacaat 408 || ||||| ||||||||||||| ||||||||||||||| Sbjct: 27800 ttcttgggaggcctcacaatcctccttgttgcaacaat 27763 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Minus Query: 108 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 167 |||||||||||||||||| | ||||||||| | | ||||| || ||||||||||||| Sbjct: 28312 atcttcaagcagtttcagtcatagggtactcgaaggcaacatctttcccacaaagcctgc 28253 Query: 168 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 227 |||| |||| | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 28252 ggtagactgcggagaaggtctcaagcttgtattcggtattgttgcgctcctttgggtcca 28193 Query: 228 agaagatct 236 |||| |||| Sbjct: 28192 agaaaatct 28184 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Minus Query: 108 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 167 |||||||||||||||||| | |||||||| | | ||||| || ||||||||||||| Sbjct: 24056 atcttcaagcagtttcagtcatagggtactcaaaggcaacatctttcccacaaagcctgc 23997 Query: 168 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 227 |||| || | | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 23996 ggtagaccgcggagaaggtctcgagcttgtattcggtattgttgcgctcctttgggtcca 23937 Query: 228 agaagatct 236 |||| |||| Sbjct: 23936 agaaaatct 23928
>gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare stain, clone OSJNBb0036D03, from chromosome 3, complete sequence Length = 125800 Score = 137 bits (69), Expect = 4e-29 Identities = 111/125 (88%) Strand = Plus / Minus Query: 417 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaagg 476 |||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| | Sbjct: 79801 ccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaatg 79742 Query: 477 acttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcca 536 |||||| || | |||||| |||||||| ||||| |||||||||||||| |||| ||||| Sbjct: 79741 ccttgcgcagacggtacggcacgtggatcaccacagccttcctgttcccggcaatatcca 79682 Query: 537 tctgg 541 ||||| Sbjct: 79681 tctgg 79677 Score = 131 bits (66), Expect = 3e-27 Identities = 135/158 (85%) Strand = Plus / Minus Query: 251 ccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctcc 310 ||||| ||||| ||||||| || || || ||||||||||||||||| || ||||||||| Sbjct: 80578 ccatccagacggtatctgatgcgcttgccaacaatctcagctgggtagactacatcctcc 80519 Query: 311 aaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaacct 370 || | |||||||||||||||||| | ||||||||| |||||||| |||||| || || Sbjct: 80518 aagataccatcatgaacagcagtaagagttcttgtgcgagggcgctgaacagccgagccc 80459 Query: 371 tttttgggtggcctcacaatccgccttgttgcaacaat 408 || ||||| ||||||||||||| ||||||||||||||| Sbjct: 80458 ttcttgggaggcctcacaatcctccttgttgcaacaat 80421 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Minus Query: 417 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaagg 476 |||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| | Sbjct: 84045 ccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaatg 83986 Query: 477 acttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcca 536 |||||| || | |||||| ||||| || ||||| |||||||||||||| |||| ||||| Sbjct: 83985 ccttgcgcagacggtacggcacgtgaatcaccacagccttcctgttcccggcaatatcca 83926 Query: 537 tctgg 541 ||||| Sbjct: 83925 tctgg 83921 Score = 115 bits (58), Expect = 2e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 251 ccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctcc 310 ||||| ||||| ||||||| || || || ||||||||||||||||| || ||||||||| Sbjct: 84833 ccatccagacggtatctgatgcgcttgccaacaatctcagctgggtagactacatcctcc 84774 Query: 311 aaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaacct 370 || | || |||||||||||| || | ||||||||| |||||||| |||||| || || Sbjct: 84773 aagatacaatcatgaacagcggtaagagttcttgtgcgagggcgctgaacagccgagccc 84714 Query: 371 tttttgggtggcctcacaatccgccttgttgcaacaat 408 || ||||| ||||||||||||| ||||||||||||||| Sbjct: 84713 ttcttgggaggcctcacaatcctccttgttgcaacaat 84676 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Minus Query: 108 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 167 |||||||||||||||||| | ||||||||| | | ||||| || ||||||||||||| Sbjct: 85225 atcttcaagcagtttcagtcatagggtactcgaaggcaacatctttcccacaaagcctgc 85166 Query: 168 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 227 |||| |||| | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 85165 ggtagactgcggagaaggtctcaagcttgtattcggtattgttgcgctcctttgggtcca 85106 Query: 228 agaagatct 236 |||| |||| Sbjct: 85105 agaaaatct 85097 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Minus Query: 108 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 167 |||||||||||||||||| | |||||||| | | ||||| || ||||||||||||| Sbjct: 80969 atcttcaagcagtttcagtcatagggtactcaaaggcaacatctttcccacaaagcctgc 80910 Query: 168 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 227 |||| || | | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 80909 ggtagaccgcggagaaggtctcgagcttgtattcggtattgttgcgctcctttgggtcca 80850 Query: 228 agaagatct 236 |||| |||| Sbjct: 80849 agaaaatct 80841
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 137 bits (69), Expect = 4e-29 Identities = 111/125 (88%) Strand = Plus / Minus Query: 417 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaagg 476 |||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| | Sbjct: 10364436 ccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaatg 10364377 Query: 477 acttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcca 536 |||||| || | |||||| |||||||| ||||| |||||||||||||| |||| ||||| Sbjct: 10364376 ccttgcgcagacggtacggcacgtggatcaccacagccttcctgttcccggcaatatcca 10364317 Query: 537 tctgg 541 ||||| Sbjct: 10364316 tctgg 10364312 Score = 131 bits (66), Expect = 3e-27 Identities = 135/158 (85%) Strand = Plus / Minus Query: 251 ccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctcc 310 ||||| ||||| ||||||| || || || ||||||||||||||||| || ||||||||| Sbjct: 10365213 ccatccagacggtatctgatgcgcttgccaacaatctcagctgggtagactacatcctcc 10365154 Query: 311 aaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaacct 370 || | |||||||||||||||||| | ||||||||| |||||||| |||||| || || Sbjct: 10365153 aagataccatcatgaacagcagtaagagttcttgtgcgagggcgctgaacagccgagccc 10365094 Query: 371 tttttgggtggcctcacaatccgccttgttgcaacaat 408 || ||||| ||||||||||||| ||||||||||||||| Sbjct: 10365093 ttcttgggaggcctcacaatcctccttgttgcaacaat 10365056 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Minus Query: 417 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaagg 476 |||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| | Sbjct: 10368680 ccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaatg 10368621 Query: 477 acttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcca 536 |||||| || | |||||| ||||| || ||||| |||||||||||||| |||| ||||| Sbjct: 10368620 ccttgcgcagacggtacggcacgtgaatcaccacagccttcctgttcccggcaatatcca 10368561 Query: 537 tctgg 541 ||||| Sbjct: 10368560 tctgg 10368556 Score = 115 bits (58), Expect = 2e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 251 ccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctcc 310 ||||| ||||| ||||||| || || || ||||||||||||||||| || ||||||||| Sbjct: 10369468 ccatccagacggtatctgatgcgcttgccaacaatctcagctgggtagactacatcctcc 10369409 Query: 311 aaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaacct 370 || | || |||||||||||| || | ||||||||| |||||||| |||||| || || Sbjct: 10369408 aagatacaatcatgaacagcggtaagagttcttgtgcgagggcgctgaacagccgagccc 10369349 Query: 371 tttttgggtggcctcacaatccgccttgttgcaacaat 408 || ||||| ||||||||||||| ||||||||||||||| Sbjct: 10369348 ttcttgggaggcctcacaatcctccttgttgcaacaat 10369311 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Minus Query: 108 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 167 |||||||||||||||||| | ||||||||| | | ||||| || ||||||||||||| Sbjct: 10369860 atcttcaagcagtttcagtcatagggtactcgaaggcaacatctttcccacaaagcctgc 10369801 Query: 168 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 227 |||| |||| | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 10369800 ggtagactgcggagaaggtctcaagcttgtattcggtattgttgcgctcctttgggtcca 10369741 Query: 228 agaagatct 236 |||| |||| Sbjct: 10369740 agaaaatct 10369732 Score = 65.9 bits (33), Expect = 1e-07 Identities = 105/129 (81%) Strand = Plus / Minus Query: 108 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 167 |||||||||||||||||| | |||||||| | | ||||| || ||||||||||||| Sbjct: 10365604 atcttcaagcagtttcagtcatagggtactcaaaggcaacatctttcccacaaagcctgc 10365545 Query: 168 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 227 |||| || | | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 10365544 ggtagaccgcggagaaggtctcgagcttgtattcggtattgttgcgctcctttgggtcca 10365485 Query: 228 agaagatct 236 |||| |||| Sbjct: 10365484 agaaaatct 10365476
>dbj|AK061276.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-E11, full insert sequence Length = 811 Score = 133 bits (67), Expect = 7e-28 Identities = 112/127 (88%) Strand = Plus / Minus Query: 416 tccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaag 475 ||||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| Sbjct: 357 tccttgccgctgaacttcttctcgagctccctgacaagcctgacatggattttcttgaat 298 Query: 476 gacttgcggagcctgtacgggacgtggatgaccacggccttcctgttccctgcaacatcc 535 | |||||| || | |||||| ||||| || ||||| |||||||||||||| |||| |||| Sbjct: 297 gccttgcgcagacggtacggcacgtgaatcaccacagccttcctgttcccggcaatatcc 238 Query: 536 atctgga 542 ||||||| Sbjct: 237 atctgga 231 Score = 113 bits (57), Expect = 7e-22 Identities = 168/205 (81%) Strand = Plus / Minus Query: 108 atcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcctgc 167 |||||||||||||||||| | ||||||||| | | ||||| || ||||||||||||| Sbjct: 577 atcttcaagcagtttcagtcatagggtactcgaaggcaacatctttcccacaaagcctgc 518 Query: 168 ggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtcca 227 |||| |||| | |||||| || | |||||| || || |||||||| ||||||||||||| Sbjct: 517 ggtagactgcggagaaggtctcaagcttgtattcggtattgttgcgctcctttgggtcca 458 Query: 228 agaagatcttgatgattttcgagccatcaagacgatatctgacacgtttccccacaatct 287 |||| |||||||||| || | ||||| ||||| ||||||| || || || ||||||| Sbjct: 457 agaaaatcttgatgaccttggcaccatccagacggtatctgatgcgcttgccaacaatct 398 Query: 288 cagctgggtaaacaacatcctccaa 312 |||||||||| || ||||| ||||| Sbjct: 397 cagctgggtagactacatcttccaa 373
>ref|XM_465276.1| Oryza sativa (japonica cultivar-group), mRNA Length = 339 Score = 119 bits (60), Expect = 1e-23 Identities = 144/172 (83%) Strand = Plus / Minus Query: 303 catcctccaaaagaccatcatgaacagcagtcaaagttcttgtacgagggcgaacaacag 362 |||||||||| | ||||||||||||| | ||||||||||||||||||| || ||||| Sbjct: 235 catcctccaagattccatcatgaacagtaatcaaagttcttgtacgaggatgatgaacag 176 Query: 363 cagaaccttttttgggtggcctcacaatccgccttgttgcaacaataacaacgtccttgc 422 | ||||| || ||| | ||||||||||||| |||||||||| ||| || || ||||||| Sbjct: 175 ctgaacccttattgagaggcctcacaatcctccttgttgcatcaaagaccacatccttgc 116 Query: 423 cgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaa 474 | |||||||||||||| |||||| |||| ||||| || ||||| ||| |||| Sbjct: 115 cactgaacttcttctcaagctccttgacaagcctaacatggattttcttgaa 64
>gb|AF542971.1| Triticum aestivum ribosomal protein S7 mRNA, partial cds Length = 392 Score = 109 bits (55), Expect = 1e-20 Identities = 145/175 (82%) Strand = Plus / Minus Query: 106 ggatcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcct 165 ||||||||| || ||||||| || |||||||| | || || || || ||||||||||| Sbjct: 177 ggatcttcaggcggtttcagtcacagggtactcaaagacaacgtctttcccacaaagcct 118 Query: 166 gcggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtc 225 |||||| |||| || |||||| |||| |||||| || ||||||||||| ||||||||||| Sbjct: 117 gcggtagactgcagagaaggtctccagcttgtattcagtgttgttgcgctcctttgggtc 58 Query: 226 caagaagatcttgatgattttcgagccatcaagacgatatctgacacgtttcccc 280 |||| |||||||||||| || | ||||| | ||| ||||||||||| |||||| Sbjct: 57 caagtagatcttgatgaccttggcaccatccaaacggtatctgacacgcttcccc 3
>gb|AY290724.1| Triticum aestivum ribosomal protein S7-like mRNA, partial sequence Length = 393 Score = 109 bits (55), Expect = 1e-20 Identities = 145/175 (82%) Strand = Plus / Minus Query: 106 ggatcttcaagcagtttcagcaacggggtactcgtataccacatccttgccacaaagcct 165 ||||||||| || ||||||| || |||||||| | || || || || ||||||||||| Sbjct: 178 ggatcttcaggcggtttcagtcacagggtactcaaagacaacgtctttcccacaaagcct 119 Query: 166 gcggtacactgaagtgaaggtatccaacttgtactctgtgttgttgcgttcctttgggtc 225 |||||| |||| || |||||| |||| |||||| || ||||||||||| ||||||||||| Sbjct: 118 gcggtagactgcagagaaggtctccagcttgtattcagtgttgttgcgctcctttgggtc 59 Query: 226 caagaagatcttgatgattttcgagccatcaagacgatatctgacacgtttcccc 280 |||| |||||||||||| || | ||||| | ||| ||||||||||| |||||| Sbjct: 58 caagtagatcttgatgaccttggcaccatccaaacggtatctgacacgcttcccc 4
>gb|AC134928.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1164G01, complete sequence Length = 151938 Score = 97.6 bits (49), Expect = 4e-17 Identities = 106/125 (84%) Strand = Plus / Plus Query: 263 tatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaaaagaccatca 322 ||||||||||| ||||| |||||||| ||||| || |||||||||||||| | |||||| Sbjct: 15621 tatctgacacgcttcccaacaatctctgctggatacacaacatcctccaagatgccatca 15680 Query: 323 tgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggc 382 ||||||||||| | || | |||||||||||||||||||| || ||||| || || ||| Sbjct: 15681 tgaacagcagtaagtgtgcgggtacgagggcgaacaacagctgagcctttctttgggggc 15740 Query: 383 ctcac 387 ||||| Sbjct: 15741 ctcac 15745 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 193 cttgtactctgtgttgttgcgttcctttgggtccaagaagatct 236 ||||||||| ||||||||||| ||||||||||||| |||||||| Sbjct: 14995 cttgtactcggtgttgttgcgctcctttgggtccaggaagatct 15038
>gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1036C05, complete sequence Length = 143400 Score = 97.6 bits (49), Expect = 4e-17 Identities = 106/125 (84%) Strand = Plus / Plus Query: 263 tatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaaaagaccatca 322 ||||||||||| ||||| |||||||| ||||| || |||||||||||||| | |||||| Sbjct: 119434 tatctgacacgcttcccaacaatctctgctggatacacaacatcctccaagatgccatca 119493 Query: 323 tgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggc 382 ||||||||||| | || | |||||||||||||||||||| || ||||| || || ||| Sbjct: 119494 tgaacagcagtaagtgtgcgggtacgagggcgaacaacagctgagcctttctttgggggc 119553 Query: 383 ctcac 387 ||||| Sbjct: 119554 ctcac 119558 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 193 cttgtactctgtgttgttgcgttcctttgggtccaagaagatct 236 ||||||||| ||||||||||| ||||||||||||| |||||||| Sbjct: 118808 cttgtactcggtgttgttgcgctcctttgggtccaggaagatct 118851
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 97.6 bits (49), Expect = 4e-17 Identities = 106/125 (84%) Strand = Plus / Plus Query: 263 tatctgacacgtttccccacaatctcagctgggtaaacaacatcctccaaaagaccatca 322 ||||||||||| ||||| |||||||| ||||| || |||||||||||||| | |||||| Sbjct: 16168264 tatctgacacgcttcccaacaatctctgctggatacacaacatcctccaagatgccatca 16168323 Query: 323 tgaacagcagtcaaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggc 382 ||||||||||| | || | |||||||||||||||||||| || ||||| || || ||| Sbjct: 16168324 tgaacagcagtaagtgtgcgggtacgagggcgaacaacagctgagcctttctttgggggc 16168383 Query: 383 ctcac 387 ||||| Sbjct: 16168384 ctcac 16168388 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 193 cttgtactctgtgttgttgcgttcctttgggtccaagaagatct 236 ||||||||| ||||||||||| ||||||||||||| |||||||| Sbjct: 16167638 cttgtactcggtgttgttgcgctcctttgggtccaggaagatct 16167681
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 97.6 bits (49), Expect = 4e-17 Identities = 110/129 (85%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 275 ttccccacaatctcagctgggtaaacaacatcctccaaaagaccatcatgaacagcagtc 334 ||||| ||||||||||||||| | || ||||||||||| | ||||||||||||| | || Sbjct: 13024659 ttcccaacaatctcagctggg-agactacatcctccaagattccatcatgaacagtaatc 13024717 Query: 335 aaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggcctcacaatccgc 394 ||||||||||||||||| || |||||| ||||| || ||| | ||||||||||||| | Sbjct: 13024718 aaagttcttgtacgaggatgatgaacagctgaacccttattgagaggcctcacaatcctc 13024777 Query: 395 cttgttgca 403 ||||||||| Sbjct: 13024778 cttgttgca 13024786 Score = 60.0 bits (30), Expect = 8e-06 Identities = 75/90 (83%) Strand = Plus / Plus Query: 146 acatccttgccacaaagcctgcggtacactgaagtgaaggtatccaacttgtactctgtg 205 ||||| || ||||||||||| ||||| |||| | |||||| |||| |||||| || | Sbjct: 13024255 acatctttcccacaaagcctacggtagactgcaaagaaggtctccagcttgtattcgata 13024314 Query: 206 ttgttgcgttcctttgggtccaagaagatc 235 |||||||| |||||||| |||||||||||| Sbjct: 13024315 ttgttgcgctcctttggatccaagaagatc 13024344 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 417 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaa 474 ||||||| |||||||||||||| |||||| |||| ||||| || ||||| ||| |||| Sbjct: 13025424 ccttgccactgaacttcttctcaagctccttgacaagcctaacatggattttcttgaa 13025481
>dbj|AP004890.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0688H12 Length = 139279 Score = 97.6 bits (49), Expect = 4e-17 Identities = 110/129 (85%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 275 ttccccacaatctcagctgggtaaacaacatcctccaaaagaccatcatgaacagcagtc 334 ||||| ||||||||||||||| | || ||||||||||| | ||||||||||||| | || Sbjct: 134302 ttcccaacaatctcagctggg-agactacatcctccaagattccatcatgaacagtaatc 134360 Query: 335 aaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggcctcacaatccgc 394 ||||||||||||||||| || |||||| ||||| || ||| | ||||||||||||| | Sbjct: 134361 aaagttcttgtacgaggatgatgaacagctgaacccttattgagaggcctcacaatcctc 134420 Query: 395 cttgttgca 403 ||||||||| Sbjct: 134421 cttgttgca 134429 Score = 60.0 bits (30), Expect = 8e-06 Identities = 75/90 (83%) Strand = Plus / Plus Query: 146 acatccttgccacaaagcctgcggtacactgaagtgaaggtatccaacttgtactctgtg 205 ||||| || ||||||||||| ||||| |||| | |||||| |||| |||||| || | Sbjct: 133898 acatctttcccacaaagcctacggtagactgcaaagaaggtctccagcttgtattcgata 133957 Query: 206 ttgttgcgttcctttgggtccaagaagatc 235 |||||||| |||||||| |||||||||||| Sbjct: 133958 ttgttgcgctcctttggatccaagaagatc 133987 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 417 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaa 474 ||||||| |||||||||||||| |||||| |||| ||||| || ||||| ||| |||| Sbjct: 135067 ccttgccactgaacttcttctcaagctccttgacaagcctaacatggattttcttgaa 135124
>dbj|AP004789.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476C12 Length = 157570 Score = 97.6 bits (49), Expect = 4e-17 Identities = 110/129 (85%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 275 ttccccacaatctcagctgggtaaacaacatcctccaaaagaccatcatgaacagcagtc 334 ||||| ||||||||||||||| | || ||||||||||| | ||||||||||||| | || Sbjct: 1236 ttcccaacaatctcagctggg-agactacatcctccaagattccatcatgaacagtaatc 1294 Query: 335 aaagttcttgtacgagggcgaacaacagcagaaccttttttgggtggcctcacaatccgc 394 ||||||||||||||||| || |||||| ||||| || ||| | ||||||||||||| | Sbjct: 1295 aaagttcttgtacgaggatgatgaacagctgaacccttattgagaggcctcacaatcctc 1354 Query: 395 cttgttgca 403 ||||||||| Sbjct: 1355 cttgttgca 1363 Score = 60.0 bits (30), Expect = 8e-06 Identities = 75/90 (83%) Strand = Plus / Plus Query: 146 acatccttgccacaaagcctgcggtacactgaagtgaaggtatccaacttgtactctgtg 205 ||||| || ||||||||||| ||||| |||| | |||||| |||| |||||| || | Sbjct: 832 acatctttcccacaaagcctacggtagactgcaaagaaggtctccagcttgtattcgata 891 Query: 206 ttgttgcgttcctttgggtccaagaagatc 235 |||||||| |||||||| |||||||||||| Sbjct: 892 ttgttgcgctcctttggatccaagaagatc 921 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 417 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttcctgaa 474 ||||||| |||||||||||||| |||||| |||| ||||| || ||||| ||| |||| Sbjct: 2001 ccttgccactgaacttcttctcaagctccttgacaagcctaacatggattttcttgaa 2058
>ref|NM_103777.2| Arabidopsis thaliana structural constituent of ribosome AT1G48830 transcript variant AT1G48830.1 mRNA, complete cds Length = 842 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 193 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgatttt 246 |||||||||||||||||| | |||||||||||||||||||| ||| |||||||| Sbjct: 601 cttgtactctgtgttgttcctttcctttgggtccaagaagaccttcatgatttt 548
>ref|NM_179455.2| Arabidopsis thaliana structural constituent of ribosome AT1G48830 transcript variant AT1G48830.2 mRNA, complete cds Length = 837 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 193 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgatttt 246 |||||||||||||||||| | |||||||||||||||||||| ||| |||||||| Sbjct: 541 cttgtactctgtgttgttcctttcctttgggtccaagaagaccttcatgatttt 488
>gb|AY072617.1| Arabidopsis thaliana At1g48830/T24P22_5 mRNA, complete cds Length = 576 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 193 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgatttt 246 |||||||||||||||||| | |||||||||||||||||||| ||| |||||||| Sbjct: 498 cttgtactctgtgttgttcctttcctttgggtccaagaagaccttcatgatttt 445
>gb|AF412048.1|AF412048 Arabidopsis thaliana At1g48830/T24P22_5 mRNA, complete cds Length = 814 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 193 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgatttt 246 |||||||||||||||||| | |||||||||||||||||||| ||| |||||||| Sbjct: 595 cttgtactctgtgttgttcctttcctttgggtccaagaagaccttcatgatttt 542
>gb|AY086866.1| Arabidopsis thaliana clone 28739 mRNA, complete sequence Length = 841 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 193 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgatttt 246 |||||||||||||||||| | |||||||||||||||||||| ||| |||||||| Sbjct: 599 cttgtactctgtgttgttcctttcctttgggtccaagaagaccttcatgatttt 546 Score = 40.1 bits (20), Expect = 7.8 Identities = 35/40 (87%) Strand = Plus / Minus Query: 365 gaaccttttttgggtggcctcacaatccgccttgttgcaa 404 ||||| || ||||| ||||||||||||| |||||| |||| Sbjct: 427 gaacccttcttgggcggcctcacaatcctccttgtagcaa 388
>gb|DQ228355.1| Solanum tuberosum clone 153A08 ribosomal protein S7-like protein mRNA, complete cds Length = 881 Score = 71.9 bits (36), Expect = 2e-09 Identities = 120/148 (81%) Strand = Plus / Minus Query: 182 aaggtatccaacttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatg 241 ||||| |||||||| |||||||||||||| |||||||| ||||||||| | | ||| || Sbjct: 602 aaggtctccaacttatactctgtgttgtttcgttccttggggtccaagtacaccttcatt 543 Query: 242 attttcgagccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaaca 301 || || |||||||||| |||||| || ||| ||||| |||||||| || ||| ||| Sbjct: 542 atcttggagccatcaacacgatacctagtacgcttcccaacaatctccgcagggacaacc 483 Query: 302 acatcctccaaaagaccatcatgaacag 329 | ||||||||| | |||||||||||| Sbjct: 482 aaatcctccaatatggcatcatgaacag 455
>gb|DQ200382.1| Solanum tuberosum clone 063A09 unknown mRNA Length = 817 Score = 71.9 bits (36), Expect = 2e-09 Identities = 120/148 (81%) Strand = Plus / Minus Query: 182 aaggtatccaacttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatg 241 ||||| |||||||| |||||||||||||| |||||||| ||||||||| | | ||| || Sbjct: 589 aaggtctccaacttatactctgtgttgtttcgttccttggggtccaagtacaccttcatt 530 Query: 242 attttcgagccatcaagacgatatctgacacgtttccccacaatctcagctgggtaaaca 301 || || |||||||||| |||||| || ||| ||||| |||||||| || ||| ||| Sbjct: 529 atcttggagccatcaacacgatacctagtacgcttcccaacaatctccgcagggacaacc 470 Query: 302 acatcctccaaaagaccatcatgaacag 329 | ||||||||| | |||||||||||| Sbjct: 469 aaatcctccaatatggcatcatgaacag 442
>gb|AC073555.9|AC073555 Arabidopsis thaliana chromosome 1 BAC F11I4 genomic sequence, complete sequence Length = 80561 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 193 cttgtactctgtgttgttgcgttcctttgggtccaagaaga 233 |||||||||||||||||| | |||||||||||||||||||| Sbjct: 2112 cttgtactctgtgttgttcctttcctttgggtccaagaaga 2072
>gb|AC084242.4|AC084242 Arabidopsis thaliana chromosome 1 BAC T24P22 genomic sequence, complete sequence Length = 18062 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 193 cttgtactctgtgttgttgcgttcctttgggtccaagaaga 233 |||||||||||||||||| | |||||||||||||||||||| Sbjct: 15801 cttgtactctgtgttgttcctttcctttgggtccaagaaga 15761
>gb|DQ191636.1| Solanum tuberosum 40S ribosomal protein S7-like protein mRNA, complete cds Length = 893 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 182 aaggtatccaacttgtactctgtgttgttgcgttcctttgggtccaag 229 ||||| |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 585 aaggtctccaacttatactctgtgttgtttcgttccttggggtccaag 538
>ref|XM_784661.1| PREDICTED: Strongylocentrotus purpuratus similar to 40S ribosomal protein S7 (S8) (LOC584812), mRNA Length = 667 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 418 cttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatcttc 469 ||||||||||||||||||||| ||||| | ||| |||||||| ||||||||| Sbjct: 290 cttgccgctgaacttcttctcaagctctcggactagcctgacctggatcttc 239
>dbj|AP004915.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT16G15, TM0073, complete sequence Length = 90077 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 188 tccaacttgtactctgtgttgttgcgttcctttgggtccaagaa 231 |||| ||||||||| |||||||| |||||||||||||||||||| Sbjct: 14984 tccagcttgtactcagtgttgtttcgttcctttgggtccaagaa 14941 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Minus Query: 417 ccttgccgctgaacttcttctcgagctccctgac 450 ||||||| || ||||||||||| ||||||||||| Sbjct: 14053 ccttgccactaaacttcttctcaagctccctgac 14020 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 251 ccatcaagacgatatctgacacgtttccccacaatctcagc 291 ||||||| ||||| || ||||||||||| ||||||||||| Sbjct: 14772 ccatcaactcgatacctcacacgtttcccaacaatctcagc 14732 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 cgttcctttgggtccaagaa 231 |||||||||||||||||||| Sbjct: 43270 cgttcctttgggtccaagaa 43251 Score = 40.1 bits (20), Expect = 7.8 Identities = 35/40 (87%) Strand = Plus / Minus Query: 417 ccttgccgctgaacttcttctcgagctccctgacgagcct 456 ||||||| || |||||||||| ||||||||||| ||||| Sbjct: 24439 ccttgccactaaacttcttcttaagctccctgactagcct 24400
>gb|DQ241830.1| Solanum tuberosum clone 174B09 40S ribosomal protein S7-like protein-like mRNA, complete cds Length = 894 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 182 aaggtatccaacttgtactctgtgttgttgcgttcctttgggtccaag 229 ||||| |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 592 aaggtctccaacttatactctgtgttgtttcgttccttggggtccaag 545
>emb|CR940311.11| M.truncatula DNA sequence from clone MTH2-17E17 on chromosome 3, complete sequence Length = 122868 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 417 ccttgccgctgaacttcttctcgagctccctgacgagcctgacgtggatctt 468 |||| |||||||| ||||||||||||||||| || |||||||| || ||||| Sbjct: 45492 cctttccgctgaatttcttctcgagctccctaacaagcctgacatgaatctt 45441
>gb|DQ377970.1| Populus x canadensis putative 40S ribosomal protein S7 mRNA, partial cds Length = 546 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 198 actctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagccatcaa 257 |||| ||||||||||| ||||| || ||||||||||||||| | ||||| || ||||||| Sbjct: 546 actcagtgttgttgcgctccttgggatccaagaagatcttgctaattttggacccatcaa 487
>gb|DQ415921.1| Cleome spinosa clone BAC Cs2, complete sequence Length = 132380 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 417 ccttgccgctgaacttcttctcgagctccct 447 ||||||| ||||||||||||||||||||||| Sbjct: 125704 ccttgccactgaacttcttctcgagctccct 125674
>gb|AF056316.1|AF056316 Avicennia marina 40S ribosome protein S7 mRNA, complete cds Length = 833 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 263 tatctgacacgtttccccacaatctcagctgggtaaacaacatcctc 309 ||||| |||||||| || ||||||||||| |||||||||| |||||| Sbjct: 493 tatctaacacgttttccaacaatctcagcagggtaaacaatatcctc 447 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 409 aacaacgtccttgccgctgaacttcttctcgagctccctgacgagcctg 457 |||||| ||||| |||||||||||||| || |||||||| || |||||| Sbjct: 347 aacaacttcctttccgctgaacttcttttcaagctccctcaccagcctg 299
>gb|AF098519.1|AF098519 Avicennia marina unknown mRNA Length = 833 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 263 tatctgacacgtttccccacaatctcagctgggtaaacaacatcctc 309 ||||| |||||||| || ||||||||||| |||||||||| |||||| Sbjct: 493 tatctaacacgttttccaacaatctcagcagggtaaacaatatcctc 447 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 409 aacaacgtccttgccgctgaacttcttctcgagctccctgacgagcctg 457 |||||| ||||| |||||||||||||| || |||||||| || |||||| Sbjct: 347 aacaacttcctttccgctgaacttcttttcaagctccctcaccagcctg 299
>ref|XM_716679.1| Candida albicans SC5314 putative cytosolic ribosomal protein S7 (CaO19_1700), mRNA Length = 561 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 319 atcatgaacagcagtcaaagttcttg 344 |||||||||||||||||||||||||| Sbjct: 357 atcatgaacagcagtcaaagttcttg 332
>ref|XM_716558.1| Candida albicans SC5314 putative cytosolic ribosomal protein S7 (CaO19_9267), mRNA Length = 561 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 319 atcatgaacagcagtcaaagttcttg 344 |||||||||||||||||||||||||| Sbjct: 357 atcatgaacagcagtcaaagttcttg 332
>gb|DQ415922.1| Cleome spinosa clone BAC Cs1, complete sequence Length = 146078 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 417 ccttgccgctgaacttcttctcgagctccct 447 ||||||| |||||||||||||| |||||||| Sbjct: 142888 ccttgccactgaacttcttctccagctccct 142858
>emb|X94942.1|FRRPS7U17 F.rubripes rpS7 and snoRNA U17 genes Length = 4298 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 413 acgtccttgccgctgaacttcttctcgagctccct 447 |||| ||| ||||||||||||||||| |||||||| Sbjct: 2003 acgtgctttccgctgaacttcttctccagctccct 1969
>ref|NM_121618.2| Arabidopsis thaliana structural constituent of ribosome AT5G16130 mRNA, complete cds Length = 878 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Minus Query: 416 tccttgccgctgaacttcttctcgagctccctgacgag 453 ||||| || |||||||||||||| ||||| |||||||| Sbjct: 404 tcctttccactgaacttcttctcaagctctctgacgag 367 Score = 42.1 bits (21), Expect = 2.0 Identities = 57/69 (82%) Strand = Plus / Minus Query: 193 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 252 |||||||||||||||||| |||||| | ||||| |||| ||| ||||| || || || Sbjct: 627 cttgtactctgtgttgttcttttccttggcatccaaaaagaccttcatgatcttggaacc 568 Query: 253 atcaagacg 261 ||||||||| Sbjct: 567 atcaagacg 559
>gb|AY940168.1| Cyanophage P-SSM4, complete genome Length = 178249 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 226 caagaagatcttgatgattttc 247 |||||||||||||||||||||| Sbjct: 153250 caagaagatcttgatgattttc 153271
>ref|XM_963054.1| PREDICTED: Tribolium castaneum similar to CG1883-PA, isoform A (LOC656528), mRNA Length = 653 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 409 aacaacgtccttgccgctgaacttcttctc 438 |||||||| |||||||||||||||||||| Sbjct: 307 aacaacgtgtttgccgctgaacttcttctc 278
>gb|AF402815.1| Ictalurus punctatus 40S ribosomal protein S7 mRNA, complete cds Length = 641 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Minus Query: 418 cttgccgctgaacttcttctcgagctccctgacgagcc 455 |||||| |||||||||||||| ||||||| ||||||| Sbjct: 292 cttgccactgaacttcttctccagctcccgcacgagcc 255
>gb|BT024914.1| Arabidopsis thaliana At5g16130 mRNA, complete cds Length = 573 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Minus Query: 416 tccttgccgctgaacttcttctcgagctccctgacgag 453 ||||| || |||||||||||||| ||||| |||||||| Sbjct: 275 tcctttccactgaacttcttctcaagctctctgacgag 238 Score = 42.1 bits (21), Expect = 2.0 Identities = 57/69 (82%) Strand = Plus / Minus Query: 193 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 252 |||||||||||||||||| |||||| | ||||| |||| ||| ||||| || || || Sbjct: 498 cttgtactctgtgttgttcttttccttggcatccaaaaagaccttcatgatcttggaacc 439 Query: 253 atcaagacg 261 ||||||||| Sbjct: 438 atcaagacg 430
>emb|BX832565.1|CNS09ZKS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH80ZG09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 797 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Minus Query: 416 tccttgccgctgaacttcttctcgagctccctgacgag 453 ||||| || |||||||||||||| ||||| |||||||| Sbjct: 330 tcctttccactgaacttcttctcaagctctctgacgag 293 Score = 42.1 bits (21), Expect = 2.0 Identities = 57/69 (82%) Strand = Plus / Minus Query: 193 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 252 |||||||||||||||||| |||||| | ||||| |||| ||| ||||| || || || Sbjct: 553 cttgtactctgtgttgttcttttccttggcatccaaaaagaccttcatgatcttggaacc 494 Query: 253 atcaagacg 261 ||||||||| Sbjct: 493 atcaagacg 485
>gb|AY086292.1| Arabidopsis thaliana clone 23518 mRNA, complete sequence Length = 872 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Minus Query: 416 tccttgccgctgaacttcttctcgagctccctgacgag 453 ||||| || |||||||||||||| ||||| |||||||| Sbjct: 404 tcctttccactgaacttcttctcaagctctctgacgag 367 Score = 42.1 bits (21), Expect = 2.0 Identities = 57/69 (82%) Strand = Plus / Minus Query: 193 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 252 |||||||||||||||||| |||||| | ||||| |||| ||| ||||| || || || Sbjct: 627 cttgtactctgtgttgttcttttccttggcatccaaaaagaccttcatgatcttggaacc 568 Query: 253 atcaagacg 261 ||||||||| Sbjct: 567 atcaagacg 559
>gb|AF144752.1|AF144752 Brassica oleracea 40S ribosomal protein S7 homolog mRNA, complete cds Length = 798 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 425 ctgaacttcttctcgagctccctgac 450 |||||||||||||||||||| ||||| Sbjct: 347 ctgaacttcttctcgagctctctgac 322 Score = 42.1 bits (21), Expect = 2.0 Identities = 93/117 (79%) Strand = Plus / Minus Query: 193 cttgtactctgtgttgttgcgttcctttgggtccaagaagatcttgatgattttcgagcc 252 ||||||||| |||||||| | ||||| || ||||| | | ||| ||||| || | ||| Sbjct: 579 cttgtactcagtgttgttcctctccttaggctccaaatacaccttcatgatcttggtgcc 520 Query: 253 atcaagacgatatctgacacgtttccccacaatctcagctgggtaaacaacatcctc 309 ||||| ||| |||||| ||| || || ||||||||||| |||||| | |||||||| Sbjct: 519 atcaacacggtatctggtacgctttccaacaatctcagcagggtaagcgacatcctc 463
>emb|AL731836.10| Mouse DNA sequence from clone RP23-119A13 on chromosome 2, complete sequence Length = 83802 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 511 ggccttcctgttccctgcaacatcca 536 |||||||||||| ||||||||||||| Sbjct: 58345 ggccttcctgtttcctgcaacatcca 58370
>gb|AY769321.1| Bombyx mori ribosomal protein S7 (RpS7) mRNA, complete cds Length = 657 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 425 ctgaacttcttctcgagctccctgacgagcctgacgtggatcttc 469 ||||||||||| |||||||| | ||| ||||||| ||||||||| Sbjct: 275 ctgaacttcttttcgagctcacggacaagcctgatctggatcttc 231
>emb|AL353592.9| Human DNA sequence from clone RP11-569O12 on chromosome 13, complete sequence Length = 63325 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 tatccaacttgtactctgtgt 206 ||||||||||||||||||||| Sbjct: 33035 tatccaacttgtactctgtgt 33055
>gb|AF526221.1| Argopecten irradians isolate iolsaicl205ct237cn254 ribosomal protein S7 mRNA, complete cds Length = 651 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 422 ccgctgaacttcttctcgagctccctgac 450 |||||||||||||| || ||||||||||| Sbjct: 276 ccgctgaacttcttttccagctccctgac 248
>emb|AL391148.1|ATT21H19 Arabidopsis thaliana DNA chromosome 5, BAC clone T21H19 (ESSA project) Length = 77311 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 425 ctgaacttcttctcgagctccctgacgag 453 |||||||||||||| ||||| |||||||| Sbjct: 13437 ctgaacttcttctcaagctctctgacgag 13409
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 538 ctggaaggcggcgttgatgtagagg 562 |||||||||||| |||||||||||| Sbjct: 12815416 ctggaaggcggcattgatgtagagg 12815440
>emb|BX822663.1|CNS0A5ZS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB57ZB11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 760 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 281 acaatctcagctgggtaaacaacatcctc 309 ||||||||||| |||||| |||||||||| Sbjct: 477 acaatctcagcagggtaagcaacatcctc 449
>gb|AY130375.1| Branchiostoma lanceolatum ribosomal protein S7 mRNA, partial cds Length = 530 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 418 cttgccgctgaacttcttctcgagctccc 446 |||||| |||||||||||||| ||||||| Sbjct: 241 cttgccactgaacttcttctccagctccc 213
>gb|AC018867.5| Homo sapiens BAC clone RP11-66C4 from 2, complete sequence Length = 78121 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 376 gggtggcctcacaatccgcct 396 ||||||||||||||||||||| Sbjct: 28376 gggtggcctcacaatccgcct 28396
>dbj|AK173962.1| Ciona intestinalis cDNA, clone:cixxx00042, full insert sequence Length = 675 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 419 ttgccgctgaacttcttctcgagctccct 447 |||||||| ||||||||||| |||||||| Sbjct: 361 ttgccgctaaacttcttctctagctccct 389
>dbj|AP005325.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0710F09 Length = 198867 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 538 ctggaaggcggcgttgatgtagagg 562 |||||||||||| |||||||||||| Sbjct: 73540 ctggaaggcggcattgatgtagagg 73564
>dbj|AK112218.1| Ciona intestinalis cDNA, clone:ciad004i11, full insert sequence Length = 730 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 419 ttgccgctgaacttcttctcgagctccct 447 |||||||| ||||||||||| |||||||| Sbjct: 351 ttgccgctaaacttcttctctagctccct 323
>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome Length = 2572079 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ccacatccttgccacaaagc 163 |||||||||||||||||||| Sbjct: 118232 ccacatccttgccacaaagc 118213
>gb|AC120555.9| Mus musculus chromosome 12, clone RP24-311D18, complete sequence Length = 164820 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 aattttgattttttgagtac 21 |||||||||||||||||||| Sbjct: 97930 aattttgattttttgagtac 97911
>ref|XM_581800.2| PREDICTED: Bos taurus similar to 40S ribosomal protein S7 (S8) (LOC505507), mRNA Length = 1138 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 413 acgtccttgccgctgaacttcttctcgagctc 444 |||| ||| ||||||||||||||||| ||||| Sbjct: 803 acgtgcttcccgctgaacttcttctccagctc 772
>ref|XM_425623.1| PREDICTED: Gallus gallus similar to Protocadherin 8 precursor (Arcadlin) (LOC428065), mRNA Length = 3297 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 gtccttgccgctgaacttct 434 |||||||||||||||||||| Sbjct: 2832 gtccttgccgctgaacttct 2813
>gb|AC183987.3| Pan troglodytes BAC clone CH251-265I5 from chromosome 6, complete sequence Length = 162913 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tttgagtacatgatccaaat 32 |||||||||||||||||||| Sbjct: 9958 tttgagtacatgatccaaat 9977
>gb|AC145427.2| Rattus norvegicus chromosome 1 clone RP32-7K9 map q36, complete sequence Length = 154633 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 tcctccaaaagaccatcatg 324 |||||||||||||||||||| Sbjct: 14399 tcctccaaaagaccatcatg 14418
>emb|CR847946.7| Zebrafish DNA sequence from clone CH211-274N1 in linkage group 18, complete sequence Length = 149000 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 355 aacaacagcagaaccttttttggg 378 ||||| |||||||||||||||||| Sbjct: 88104 aacaaaagcagaaccttttttggg 88081
>emb|AL512427.10| Human DNA sequence from clone RP11-325M4 on chromosome 6 Contains a retinoblastoma binding protein 4 (RBBP4) pseudogene, complete sequence Length = 201657 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tttgagtacatgatccaaat 32 |||||||||||||||||||| Sbjct: 173751 tttgagtacatgatccaaat 173732
>gb|AC111321.8| Rattus norvegicus 4 BAC CH230-241A9 (Children's Hospital Oakland Research Institute) complete sequence Length = 227849 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 taattttgattttttgagta 20 |||||||||||||||||||| Sbjct: 132506 taattttgattttttgagta 132525
>emb|AL021368.1|HS55C20 Human DNA sequence from clone XXbac-55C20 on chromosome 6 Contains a beta glucuronidase (GUSB) pseudogene, the gene for a novel protein similar to Spinal Muscular Atrophy region proteins SMA3, 4 and 5, a novel pseudogene, three novel genes and a glyceraldehyde-3-phosphate dehydrogenase (GAPD) pseudogene, complete sequence Length = 188642 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tttgagtacatgatccaaat 32 |||||||||||||||||||| Sbjct: 180539 tttgagtacatgatccaaat 180558
>emb|X85811.1|SCTRNAORF S.cerevisiae tRNA-Leu, and ORF's N2212, N2215, N2219, N2223, N2227, N2231 Length = 14261 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 tgaacagcagtcaaagttct 342 |||||||||||||||||||| Sbjct: 1311 tgaacagcagtcaaagttct 1330
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 acttcttctcgagctccctg 448 |||||||||||||||||||| Sbjct: 105724 acttcttctcgagctccctg 105743 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 acttcttctcgagctccctg 448 |||||||||||||||||||| Sbjct: 66009 acttcttctcgagctccctg 66028
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 tgaacagcagtcaaagttct 342 |||||||||||||||||||| Sbjct: 215257 tgaacagcagtcaaagttct 215238
>gb|DQ066326.1| Ixodes scapularis isolate IS-6-12L-109 40S ribosomal protein S7-like mRNA, partial cds Length = 594 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 421 gccgctgaacttcttctcgagctc 444 |||||||||||||||||| ||||| Sbjct: 300 gccgctgaacttcttctccagctc 277
>gb|AF543540.1| Oncorhynchus mykiss 40S ribosomal protein S7 mRNA, partial cds Length = 132 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 422 ccgctgaacttcttctcgagctccctgacgag 453 |||||||||||||| || |||||||| ||||| Sbjct: 38 ccgctgaacttcttttccagctccctcacgag 7
>ref|XM_317713.2| Anopheles gambiae str. PEST ENSANGP00000010255 (ENSANGG00000007766), partial mRNA Length = 921 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 atcttgatgattttcgagcc 252 |||||||||||||||||||| Sbjct: 713 atcttgatgattttcgagcc 694
>ref|NM_208681.1| Eremothecium gossypii ACL076Wp (ACL076W), mRNA Length = 573 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 tgaacagcagtcaaagttct 342 |||||||||||||||||||| Sbjct: 365 tgaacagcagtcaaagttct 346
>emb|Z71372.1|SCYNL096C S.cerevisiae chromosome XIV reading frame ORF YNL096c Length = 2553 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 tgaacagcagtcaaagttct 342 |||||||||||||||||||| Sbjct: 1248 tgaacagcagtcaaagttct 1267
>gb|DQ333046.1| Synthetic construct Saccharomyces cerevisiae clone FLH005626.01X RPS7B gene, complete sequence Length = 918 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 tgaacagcagtcaaagttct 342 |||||||||||||||||||| Sbjct: 710 tgaacagcagtcaaagttct 691
>emb|CT033777.6| Mouse DNA sequence from clone RP24-267J1 on chromosome 13, complete sequence Length = 36316 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 caaataacaaagagctcaag 47 |||||||||||||||||||| Sbjct: 17426 caaataacaaagagctcaag 17407
>emb|CT032657.1| Platynereis dumerilii EST IB0AAA33DH04EM1 Length = 652 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 ttgccgctgaacttcttctc 438 |||||||||||||||||||| Sbjct: 278 ttgccgctgaacttcttctc 259
>emb|CT032656.1| Platynereis dumerilii EST IB0AAA33DH04FM1 Length = 652 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 ttgccgctgaacttcttctc 438 |||||||||||||||||||| Sbjct: 375 ttgccgctgaacttcttctc 394
>emb|CT032509.1| Platynereis dumerilii EST IB0AAA37AD11EM1 Length = 682 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 ttgccgctgaacttcttctc 438 |||||||||||||||||||| Sbjct: 278 ttgccgctgaacttcttctc 259
>emb|CT032319.1| Platynereis dumerilii EST IB0AAA40DA08EM1 Length = 783 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 ttgccgctgaacttcttctc 438 |||||||||||||||||||| Sbjct: 278 ttgccgctgaacttcttctc 259
>emb|CT032256.1| Platynereis dumerilii EST IB0AAA42AH05EM1 Length = 810 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 ttgccgctgaacttcttctc 438 |||||||||||||||||||| Sbjct: 312 ttgccgctgaacttcttctc 293
>emb|AM159218.1| Oncorhynchus mykiss mRNA for 40S ribosomal protein S7 (rps7 gene) Length = 718 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 422 ccgctgaacttcttctcgagctccctgacgag 453 |||||||||||||| || |||||||| ||||| Sbjct: 399 ccgctgaacttcttttccagctccctcacgag 368
>gb|DQ115393.1| Saccharomyces cerevisiae Pol1p (POL1) gene, partial cds; and Avt4p (AVT4), Ynl100wp (YNL100W), Oca1p (OCA1), Ras2p (RAS2), Ynl097c-bp (YNL097C-B), Pho23p (PHO23), Rps7bp (RPS7B), Ynl095cp (YNL095C), App1p (APP1), Ypt53p (YPT53), Ynl092wp (YNL092W), Nst1p (NST1), Rho2p (RHO2), Ynl089cp (YNL089C), Top2p (TOP2), Tcb2p (TCB2), Ynl086wp (YNL086W), Mkt1p (MKT1), End3p (END3), Sal1p (SAL1), Pms1p (PMS1), Sws2p (SWS2), Ynl080cp (YNL080C), and Tpm1p (TPM1) genes, complete cds Length = 48787 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 tgaacagcagtcaaagttct 342 |||||||||||||||||||| Sbjct: 13003 tgaacagcagtcaaagttct 13022
>dbj|AP003789.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1433G4, complete sequence Length = 175784 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ttttgattttttgagtacat 23 |||||||||||||||||||| Sbjct: 100007 ttttgattttttgagtacat 99988 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,320,973 Number of Sequences: 3902068 Number of extensions: 5320973 Number of successful extensions: 123010 Number of sequences better than 10.0: 96 Number of HSP's better than 10.0 without gapping: 96 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 122611 Number of HSP's gapped (non-prelim): 374 length of query: 575 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 552 effective length of database: 17,143,297,704 effective search space: 9463100332608 effective search space used: 9463100332608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
