ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal6o11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_192122.1| Oryza sativa (japonica cultivar-group), predic... 848 0.0
2gb|AF532781.1| Zea mays putative zinc finger protein mRNA, compl... 680 0.0
3dbj|AK068028.1| Oryza sativa (japonica cultivar-group) cDNA clon... 426 e-116
4gb|BT016221.1| Zea mays clone Contig54 mRNA sequence 420 e-114
5gb|AY224508.1| Oryza sativa (japonica cultivar-group) isolate 31... 402 e-109
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 329 7e-87
7dbj|AP003455.2| Oryza sativa (japonica cultivar-group) genomic D... 329 7e-87
8gb|AY103675.1| Zea mays PCO125717 mRNA sequence 311 2e-81
9ref|XM_475859.1| Oryza sativa (japonica cultivar-group), predic... 212 1e-51
10gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome... 163 1e-36
11gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome... 163 1e-36
12dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 163 1e-36
13ref|NM_112713.2| Arabidopsis thaliana EMB2454; protein binding /... 161 4e-36
14gb|AY094471.1| Arabidopsis thaliana AT3g18290/MIE15_8 mRNA, comp... 161 4e-36
15gb|BT005819.1| Arabidopsis thaliana At3g18290/MIE15_8 gene, comp... 161 4e-36
16dbj|AP004915.1| Lotus japonicus genomic DNA, chromosome 4, clone... 76 2e-10
17gb|AC135462.22| Medicago truncatula clone mth2-35o17, complete s... 74 7e-10
18gb|AC150205.5| Medicago truncatula clone mth2-72l17, complete se... 74 7e-10
19dbj|AP000414.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 68 4e-08
20gb|AY110875.1| Zea mays CL7155_-2 mRNA sequence 54 6e-04
21ref|NM_106134.1| Arabidopsis thaliana protein binding / ubiquiti... 46 0.16
22gb|BT011670.1| Arabidopsis thaliana At1g74760 mRNA, complete cds 46 0.16
23gb|DQ086838.1| Arabidopsis thaliana At1g74760 mRNA, complete cds 46 0.16
24gb|AC008263.2|F25A4 Arabidopsis thaliana chromosome 1 BAC F25A4 ... 46 0.16
25gb|AC166932.6| Mus musculus chromosome 7, clone RP23-349I13, com... 42 2.4
26gb|AC113065.16| Mus musculus chromosome 7, clone RP23-263E7, com... 42 2.4
27ref|XM_361436.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 2.4
28gb|AC158340.9| Mus musculus chromosome 1, clone RP24-161N8, comp... 42 2.4
29gb|AC102781.5| Mus musculus chromosome 1, clone RP23-271G2, comp... 42 2.4
30emb|Z96811.2|HS52D1 Human DNA sequence from clone RP1-52D1 on ch... 42 2.4
31emb|AL450336.7| Human DNA sequence from clone RP11-24C14 on chro... 42 2.4
32emb|AL139379.14| Human DNA sequence from clone RP11-358P11 on ch... 42 2.4
33gb|AC174673.2| Mus musculus BAC clone RP24-435P4 from chromosome... 42 2.4
34gb|AC114784.3| Homo sapiens BAC clone RP11-605G9 from 4, complet... 42 2.4
35ref|XM_625447.1| Cryptosporidium parvum Iowa II ORC/CDC6 like AA... 42 2.4
36gb|AC007707.14| Homo sapiens chromosome 11 clone rp11-442e11 map... 42 2.4
37gb|AC154205.1| Mus musculus BAC clone RP24-88I1 from chromosome ... 42 2.4
38gb|AC165150.3| Mus musculus BAC clone RP24-105I10 from chromosom... 42 2.4
39dbj|AP006216.1| Homo sapiens genomic DNA, chromosome 11, clone:R... 42 2.4
40gb|AC174672.2| Mus musculus BAC clone RP24-566B4 from chromosome... 42 2.4
41gb|AC002037.1|AC002037 Human Chromosome 11 Overlapping Cosmids c... 42 2.4
42dbj|AB048971.1| Macaca fascicularis brain cDNA, clone:QnpA-11984 42 2.4
43gb|AC007581.6| Drosophila melanogaster clone BACR03I24, complete... 40 9.6
44gb|AC099037.2| Drosophila melanogaster clone BACR27P17, complete... 40 9.6
45gb|AY528719.1| Homo sapiens estrogen-related receptor gamma (ESR... 40 9.6
46gb|AY330343.1| Odocoileus hemionus prion protein (prnp) gene, co... 40 9.6
47gb|AC122383.4| Mus musculus BAC clone RP23-479O8 from chromosome... 40 9.6
48emb|AL512650.8| Human DNA sequence from clone RP11-23B9 on chrom... 40 9.6
49emb|AL355975.10| Human DNA sequence from clone RP11-468C2 on chr... 40 9.6
50gb|AC099466.7| Rattus norvegicus 4 BAC CH230-63I9 (Children's Ho... 40 9.6
51emb|CR954196.1| Medicago truncatula chromosome 5 clone mth2-157e... 40 9.6
52emb|CR380956.1| Candida glabrata strain CBS138 chromosome J comp... 40 9.6
53emb|AL663039.18| Mouse DNA sequence from clone RP23-50H23 on chr... 40 9.6
54emb|BX649539.6| Mouse DNA sequence from clone RP24-371A24 on chr... 40 9.6
55gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chr... 40 9.6
56dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.6
57gb|AC007925.5|AC007925 Drosophila melanogaster, chromosome 2R, r... 40 9.6
58gb|AC125238.5| Homo sapiens BAC clone RP11-711C24 from 2, comple... 40 9.6
59gb|AC139713.1| Homo sapiens BAC clone RP11-481K16 from 4, comple... 40 9.6
60ref|XM_213729.3| PREDICTED: Rattus norvegicus TAF6 RNA polymeras... 40 9.6
61dbj|AP003620.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.6
62gb|AF225899.1|AF225899 Homo sapiens PAC clone 219d7, complete se... 40 9.6
63gb|AE003465.3| Drosophila melanogaster chromosome 2R, section 72... 40 9.6
64gb|BC100108.1| Rattus norvegicus TAF6 RNA polymerase II, TATA bo... 40 9.6
65gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. F... 40 9.6
66emb|CT571261.1| Medicago truncatula chromosome 5 clone mth2-67l4... 40 9.6
67emb|AL953840.8| Mouse DNA sequence from clone RP23-152F6 on chro... 40 9.6
68emb|CR956622.12| Pig DNA sequence from clone PigE-219N9 on chrom... 40 9.6
69dbj|D49446.1|RATTFIIDSP Rat mRNA for TFIID subunit p80, complete... 40 9.6 
>ref|NM_192122.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3192

 Score =  848 bits (428), Expect = 0.0
 Identities = 557/600 (92%)
 Strand = Plus / Minus

                                                                        
Query: 99   ctagtttggggtagaacaatctgccgtatcagtcttgataactctggtattgtaagaacc 158
            ||||||||| |||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 3192 ctagtttggcgtagaacaatctgctgtatcggtcttgataactctggtattataagaacc 3133

                                                                        
Query: 159  acaggagccgcatttgtggtacagccaatgaaattgagatctcccttttctttcacagtc 218
            ||||||||||||||| ||||||| ||| |||||| |||| ||||||||||||||||| ||
Sbjct: 3132 acaggagccgcatttatggtacaaccagtgaaatcgagacctcccttttctttcacaatc 3073

                                                                        
Query: 219  attacaaagaatatcctgacacctatcacggtattcctcaggaagctcttcggcagccaa 278
            ||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||| 
Sbjct: 3072 attacaaagtatatcctgacaccgatcacggtattcctcaggaagctcttcagcagccag 3013

                                                                        
Query: 279  caacgcatcaagcatgccaaagtacaccgccatatctcccaaggatttgcagcagatagg 338
            ||| || || | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3012 caaggcgtccaacatgccaaagtacaccgccatatctcccaaggatttgcagcagatagg 2953

                                                                        
Query: 339  acaagtgtagtgactgcaagtgtatgcctgaaagcaagctgaatgcatgaagtgaccaca 398
            ||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 2952 acaagtgtagtgactacaagtgtatgcctgaaagcaagctgaatgcatgaaatggccaca 2893

                                                                        
Query: 399  aggaagagctctaactgccgcacttgatgtgaataggaagtcgcaacagattggacagtt 458
             |||||||||||||||||||| |||||||| |||||||| || || ||||||||||||||
Sbjct: 2892 gggaagagctctaactgccgcgcttgatgtaaataggaaatcacagcagattggacagtt 2833

                                                                        
Query: 459  tgtctctagccccttctcccgacatttgtgttctgttagtttcattccaaggcagcaatt 518
            |||||||||||| |||||||| |||||||||||||||| |||||| ||||||||||||||
Sbjct: 2832 tgtctctagccctttctcccggcatttgtgttctgttaatttcatcccaaggcagcaatt 2773

                                                                        
Query: 519  gcacttcatgcaatggaagaaatcaacaccaagacctttaccaagacgacacagattaca 578
            ||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||
Sbjct: 2772 gcacttcatgcaatggaagaaatcaacaccaagacctttcccaagacggcacaaattaca 2713

                                                                        
Query: 579  aaacggacaatgatacacagtcctttcatcatcgaaaaatttgcagatattacagtaata 638
            ||| || |||||||| ||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 2712 aaatgggcaatgataaacagtcctttcatcatcaaaaaatttgcagatgttacagtaata 2653

                                                                        
Query: 639  ctttgccatggatagcccattgcaagatggagtttggcaattcggaccgacaggttgaac 698
            ||||||||||||||||||||||||||| |||||||| ||||| ||||| |||||||||||
Sbjct: 2652 ctttgccatggatagcccattgcaagacggagtttgacaatttggaccaacaggttgaac 2593
to top
>gb|AF532781.1| Zea mays putative zinc finger protein mRNA, complete cds
          Length = 1561

 Score =  680 bits (343), Expect = 0.0
 Identities = 520/579 (89%)
 Strand = Plus / Minus

                                                                        
Query: 99   ctagtttggggtagaacaatctgccgtatcagtcttgataactctggtattgtaagaacc 158
            ||||||||| ||||| |||||||| ||  ||||||||||||||| ||| ||||| || ||
Sbjct: 1291 ctagtttggtgtagagcaatctgctgtggcagtcttgataactcgggtgttgtacgaccc 1232

                                                                        
Query: 159  acaggagccgcatttgtggtacagccaatgaaattgagatctcccttttctttcacagtc 218
            ||||||||||||||||||||| | |||||||||| || |||| ||||| || ||||||||
Sbjct: 1231 acaggagccgcatttgtggtataaccaatgaaatcgacatctacctttcctctcacagtc 1172

                                                                        
Query: 219  attacaaagaatatcctgacacctatcacggtattcctcaggaagctcttcggcagccaa 278
            ||| ||||| ||||||||||||| ||||||||||||||| ||||||||||| || |||||
Sbjct: 1171 attgcaaagtatatcctgacaccgatcacggtattcctccggaagctcttcagccgccaa 1112

                                                                        
Query: 279  caacgcatcaagcatgccaaagtacaccgccatatctcccaaggatttgcagcagatagg 338
            ||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 1111 caaggcatcaagcatgccaaaataaaccgccatatctcccaaggatttgcagcagatagg 1052

                                                                        
Query: 339  acaagtgtagtgactgcaagtgtatgcctgaaagcaagctgaatgcatgaagtgaccaca 398
             |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 1051 gcaagtgtagtgactacaagtgtatgcctgaaagcaagctgaatgcatggagtggccaca 992

                                                                        
Query: 399  aggaagagctctaactgccgcacttgatgtgaataggaagtcgcaacagattggacagtt 458
            ||| || ||||| ||||| ||||||||||| ||||||||||| || || |||||||| ||
Sbjct: 991  agggagggctctgactgcggcacttgatgtaaataggaagtcacagcatattggacaatt 932

                                                                        
Query: 459  tgtctctagccccttctcccgacatttgtgttctgttagtttcattccaaggcagcaatt 518
             ||||||||||| || |||||||||||||| || |||| |||||||||||||||||| ||
Sbjct: 931  cgtctctagccctttttcccgacatttgtgctcagttaatttcattccaaggcagcagtt 872

                                                                        
Query: 519  gcacttcatgcaatggaagaaatcaacaccaagacctttaccaagacgacacagattaca 578
            ||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 871  gcatttcatgcaatggaagaaatcaacaccaagacctttcccaagacgacacaaattaca 812

                                                                        
Query: 579  aaacggacaatgatacacagtcctttcatcatcgaaaaatttgcagatattacagtaata 638
            ||||||||| || |||||||||||||||||||| |||||||| ||||| |||||||| ||
Sbjct: 811  aaacggacagtggtacacagtcctttcatcatcaaaaaatttacagatgttacagtagta 752

                                                   
Query: 639  ctttgccatggatagcccattgcaagatggagtttggca 677
            ||||||||| ||||| |  ||||||||||| ||||||||
Sbjct: 751  ctttgccatcgatagtctgttgcaagatggggtttggca 713
to top
>dbj|AK068028.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131L14, full
            insert sequence
          Length = 2693

 Score =  426 bits (215), Expect = e-116
 Identities = 494/587 (84%)
 Strand = Plus / Minus

                                                                        
Query: 112  gaacaatctgccgtatcagtcttgataactctggtattgtaagaaccacaggagccgcat 171
            |||||||| ||  ||||| ||||||||||||| || || || ||||| ||| ||||||||
Sbjct: 2592 gaacaatcagctctatcaatcttgataactctagtgttatatgaaccgcagaagccgcat 2533

                                                                        
Query: 172  ttgtggtacagccaatgaaattgagatctcccttttctttcacagtcattacaaagaata 231
            ||||| ||||||||||| ||  |||| || |||||||||||||| || |||||||| |||
Sbjct: 2532 ttgtgatacagccaatggaaccgagaccttccttttctttcacaatcgttacaaagtata 2473

                                                                        
Query: 232  tcctgacacctatcacggtattcctcaggaagctcttcggcagccaacaacgcatcaagc 291
            ||||| ||||  || ||||||||||||||||||||||| || |||| |||  ||||||||
Sbjct: 2472 tcctggcaccggtcccggtattcctcaggaagctcttctgcggccagcaagccatcaagc 2413

                                                                        
Query: 292  atgccaaagtacaccgccatatctcccaaggatttgcagcagataggacaagtgtagtga 351
            ||||||||||| || | ||||||||||||||||||  ||||||| || || |||||||||
Sbjct: 2412 atgccaaagtatactgtcatatctcccaaggatttagagcagattgggcaggtgtagtga 2353

                                                                        
Query: 352  ctgcaagtgtatgcctgaaagcaagctgaatgcatgaagtgaccacaaggaagagctcta 411
            || || ||||| |||||||||||||||||||||||||| || |||||||| ||| || ||
Sbjct: 2352 ctacaggtgtacgcctgaaagcaagctgaatgcatgaaatggccacaaggtagaccttta 2293

                                                                        
Query: 412  actgccgcacttgatgtgaataggaagtcgcaacagattggacagtttgtctctagcccc 471
            ||||| ||||| ||||| |||||||||||||| |||||||| || ||  ||||||||  |
Sbjct: 2292 actgctgcactcgatgtaaataggaagtcgcagcagattgggcaattcatctctagcatc 2233

                                                                        
Query: 472  ttctcccgacatttgtgttctgttagtttcattccaaggcagcaattgcacttcatgcaa 531
            || || |||||||| || ||| | | |||||| || ||||| || |||||||||||||||
Sbjct: 2232 ttttctcgacatttatgctctatcaatttcatgcccaggcaacagttgcacttcatgcaa 2173

                                                                        
Query: 532  tggaagaaatcaacaccaagacctttaccaagacgacacagattacaaaacggacaatga 591
            ||||| ||||||| ||| |  ||||  ||||||||||||| ||| ||||| || ||||| 
Sbjct: 2172 tggaaaaaatcaatacccaatccttgcccaagacgacacaaattgcaaaaggggcaatgg 2113

                                                                        
Query: 592  tacacagtcctttcatcatcgaaaaatttgcagatattacagtaatactttgccatggat 651
            |||||| |||||||||| || ||||| ||||| |   | || ||||||||||||||||||
Sbjct: 2112 tacacactcctttcatcgtcaaaaaacttgcatacgctgcaataatactttgccatggat 2053

                                                           
Query: 652  agcccattgcaagatggagtttggcaattcggaccgacaggttgaac 698
            |||||||||||||| || || |||||||| ||||| || ||||||||
Sbjct: 2052 agcccattgcaagaaggggtctggcaatttggaccaactggttgaac 2006
to top
>gb|BT016221.1| Zea mays clone Contig54 mRNA sequence
          Length = 1555

 Score =  420 bits (212), Expect = e-114
 Identities = 494/588 (84%)
 Strand = Plus / Minus

                                                                        
Query: 111  agaacaatctgccgtatcagtcttgataactctggtattgtaagaaccacaggagccgca 170
            |||||| ||||||||||||||||||||||||||||| ||||||||||||||| | || ||
Sbjct: 1297 agaacactctgccgtatcagtcttgataactctggtgttgtaagaaccacagaaaccaca 1238

                                                                        
Query: 171  tttgtggtacagccaatgaaattgagatctcccttttctttcacagtcattacaaagaat 230
             |||||||| |||||||||||  | || || |||||||| || ||||| ||||| || ||
Sbjct: 1237 cttgtggtagagccaatgaaaccgtgacctgccttttctctcgcagtcgttacacagtat 1178

                                                                        
Query: 231  atcctgacacctatcacggtattcctcaggaagctcttcggcagccaacaacgcatcaag 290
            |||||| ||||  ||  |||||||||| ||||||| ||| ||||||| |||  |||||||
Sbjct: 1177 atcctggcaccggtcctggtattcctctggaagctgttctgcagccagcaaaccatcaag 1118

                                                                        
Query: 291  catgccaaagtacaccgccatatctcccaaggatttgcagcagataggacaagtgtagtg 350
            ||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1117 catgccaaaatacaccgtcatatctcccaaggatttgcagcagattggacaagtgtagtg 1058

                                                                        
Query: 351  actgcaagtgtatgcctgaaagcaagctgaatgcatgaagtgaccacaaggaagagctct 410
              | ||||| ||||||||||| ||||| |||||||||||||| |||||||||||  || |
Sbjct: 1057 ggtacaagtatatgcctgaaaacaagccgaatgcatgaagtggccacaaggaaggccttt 998

                                                                        
Query: 411  aactgccgcacttgatgtgaataggaagtcgcaacagattggacagtttgtctctagccc 470
            ||||| |||||| ||||| || |  |||||||| ||||||||||||||  ||||||||  
Sbjct: 997  aactggcgcactcgatgtaaacaaaaagtcgcagcagattggacagttcatctctagcat 938

                                                                        
Query: 471  cttctcccgacatttgtgttctgttagtttcattccaaggcagcaattgcacttcatgca 530
            ||| ||||| ||||| |||||| | |  || || |||||||| |||||||||||||||||
Sbjct: 937  cttttcccggcatttatgttctatcatctttatgccaaggcaacaattgcacttcatgca 878

                                                                        
Query: 531  atggaagaaatcaacaccaagacctttaccaagacgacacagattacaaaacggacaatg 590
            ||| || ||||||   || || ||  | ||||| |||||||  || ||||| ||||||||
Sbjct: 877  atgaaaaaaatcagtgcccagtccgctcccaaggcgacacaagttgcaaaaaggacaatg 818

                                                                        
Query: 591  atacacagtcctttcatcatcgaaaaatttgcagatattacagtaatactttgccatgga 650
             || ||| |||||||||||||||| || ||||| ||  |||| |||||||| ||||||||
Sbjct: 817  gtagacactcctttcatcatcgaagaacttgcatatgctacaataatacttggccatgga 758

                                                            
Query: 651  tagcccattgcaagatggagtttggcaattcggaccgacaggttgaac 698
             || ||||||||||| || | ||||||||| ||||| |||||||||||
Sbjct: 757  cagtccattgcaagaaggggattggcaatttggaccaacaggttgaac 710
to top
>gb|AY224508.1| Oryza sativa (japonica cultivar-group) isolate 31185 putative zinc
            finger protein mRNA, partial cds
          Length = 1222

 Score =  402 bits (203), Expect = e-109
 Identities = 492/587 (83%), Gaps = 1/587 (0%)
 Strand = Plus / Minus

                                                                        
Query: 112  gaacaatctgccgtatcagtcttgataactctggtattgtaagaaccacaggagccgcat 171
            |||||||| ||  ||||| ||||||||||||| || || || ||||| ||| ||||||||
Sbjct: 1081 gaacaatcagctctatcaatcttgataactctagtgttatatgaaccgcagaagccgcat 1022

                                                                        
Query: 172  ttgtggtacagccaatgaaattgagatctcccttttctttcacagtcattacaaagaata 231
            ||||| ||||||||||| ||  |||| || |||||||||||||| || |||||||| |||
Sbjct: 1021 ttgtgatacagccaatggaaccgagaccttccttttctttcacaatcgttacaaagtata 962

                                                                        
Query: 232  tcctgacacctatcacggtattcctcaggaagctcttcggcagccaacaacgcatcaagc 291
            ||||| ||||  || ||||||||||||||||||||||| || |||| |||  ||||||||
Sbjct: 961  tcctggcaccggtcccggtattcctcaggaagctcttctgcggccagcaagccatcaagc 902

                                                                        
Query: 292  atgccaaagtacaccgccatatctcccaaggatttgcagcagataggacaagtgtagtga 351
            ||||||||||| |  | ||||||||||||||||||  ||||||| || || |||||||||
Sbjct: 901  atgccaaagtatat-gtcatatctcccaaggatttagagcagattgggcaggtgtagtga 843

                                                                        
Query: 352  ctgcaagtgtatgcctgaaagcaagctgaatgcatgaagtgaccacaaggaagagctcta 411
            || || ||||| |||||||||||||||||||||||||| || |||||||| ||| || ||
Sbjct: 842  ctacaggtgtacgcctgaaagcaagctgaatgcatgaaatggccacaaggtagaccttta 783

                                                                        
Query: 412  actgccgcacttgatgtgaataggaagtcgcaacagattggacagtttgtctctagcccc 471
            ||||| ||||| ||||| |||||||||||||| |||||||| || ||  ||||||||  |
Sbjct: 782  actgctgcactcgatgtaaataggaagtcgcagcagattgggcaattcatctctagcatc 723

                                                                        
Query: 472  ttctcccgacatttgtgttctgttagtttcattccaaggcagcaattgcacttcatgcaa 531
            || || |||||||| || ||| | | |||||| || ||||| || |||||||||||||||
Sbjct: 722  ttttctcgacatttatgctctatcaatttcatgcccaggcaacagttgcacttcatgcaa 663

                                                                        
Query: 532  tggaagaaatcaacaccaagacctttaccaagacgacacagattacaaaacggacaatga 591
            ||||| ||||||| ||| |  ||||  ||||||||||||| ||| | ||| || ||||| 
Sbjct: 662  tggaaaaaatcaatacccaatccttgcccaagacgacacaaattgccaaaggggcaatgg 603

                                                                        
Query: 592  tacacagtcctttcatcatcgaaaaatttgcagatattacagtaatactttgccatggat 651
            |||||| |||||||||| || ||||| ||||| |   | || ||||||||||||||||||
Sbjct: 602  tacacactcctttcatcgtcaaaaaacttgcatacgctgcaataatactttgccatggat 543

                                                           
Query: 652  agcccattgcaagatggagtttggcaattcggaccgacaggttgaac 698
            |||||||||||||| || || |||||||| ||||| || ||||||||
Sbjct: 542  agcccattgcaagaaggggtctggcaatttggaccaactggttgaac 496
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  329 bits (166), Expect = 7e-87
 Identities = 220/238 (92%)
 Strand = Plus / Plus

                                                                            
Query: 365      cctgaaagcaagctgaatgcatgaagtgaccacaaggaagagctctaactgccgcacttg 424
                ||||||||||||||||||||||||| || ||||| |||||||||||||||||||| ||||
Sbjct: 28442917 cctgaaagcaagctgaatgcatgaaatggccacagggaagagctctaactgccgcgcttg 28442976

                                                                            
Query: 425      atgtgaataggaagtcgcaacagattggacagtttgtctctagccccttctcccgacatt 484
                |||| |||||||| || || |||||||||||||||||||||||||| |||||||| ||||
Sbjct: 28442977 atgtaaataggaaatcacagcagattggacagtttgtctctagccctttctcccggcatt 28443036

                                                                            
Query: 485      tgtgttctgttagtttcattccaaggcagcaattgcacttcatgcaatggaagaaatcaa 544
                |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 28443037 tgtgttctgttaatttcatcccaaggcagcaattgcacttcatgcaatggaagaaatcaa 28443096

                                                                          
Query: 545      caccaagacctttaccaagacgacacagattacaaaacggacaatgatacacagtcct 602
                ||||||||||||| |||||||| |||| ||||||||| || |||||||| ||||||||
Sbjct: 28443097 caccaagacctttcccaagacggcacaaattacaaaatgggcaatgataaacagtcct 28443154



 Score =  188 bits (95), Expect = 2e-44
 Identities = 128/139 (92%)
 Strand = Plus / Plus

                                                                            
Query: 99       ctagtttggggtagaacaatctgccgtatcagtcttgataactctggtattgtaagaacc 158
                ||||||||| |||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 28441416 ctagtttggcgtagaacaatctgctgtatcggtcttgataactctggtattataagaacc 28441475

                                                                            
Query: 159      acaggagccgcatttgtggtacagccaatgaaattgagatctcccttttctttcacagtc 218
                ||||||||||||||| ||||||| ||| |||||| |||| ||||||||||||||||| ||
Sbjct: 28441476 acaggagccgcatttatggtacaaccagtgaaatcgagacctcccttttctttcacaatc 28441535

                                   
Query: 219      attacaaagaatatcctga 237
                ||||||||| |||||||||
Sbjct: 28441536 attacaaagtatatcctga 28441554



 Score =  149 bits (75), Expect = 1e-32
 Identities = 93/99 (93%)
 Strand = Plus / Plus

                                                                            
Query: 600      cctttcatcatcgaaaaatttgcagatattacagtaatactttgccatggatagcccatt 659
                |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 28444189 cctttcatcatcaaaaaatttgcagatgttacagtaatactttgccatggatagcccatt 28444248

                                                       
Query: 660      gcaagatggagtttggcaattcggaccgacaggttgaac 698
                |||||| |||||||| ||||| ||||| |||||||||||
Sbjct: 28444249 gcaagacggagtttgacaatttggaccaacaggttgaac 28444287



 Score =  121 bits (61), Expect = 3e-24
 Identities = 64/65 (98%)
 Strand = Plus / Plus

                                                                            
Query: 304      accgccatatctcccaaggatttgcagcagataggacaagtgtagtgactgcaagtgtat 363
                |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 28442566 accgccatatctcccaaggatttgcagcagataggacaagtgtagtgactacaagtgtat 28442625

                     
Query: 364      gcctg 368
                |||||
Sbjct: 28442626 gcctg 28442630



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 67/74 (90%)
 Strand = Plus / Plus

                                                                            
Query: 233      cctgacacctatcacggtattcctcaggaagctcttcggcagccaacaacgcatcaagca 292
                ||||||||| ||||||||||||||||||||||||||| ||||||| ||| || || | ||
Sbjct: 28441629 cctgacaccgatcacggtattcctcaggaagctcttcagcagccagcaaggcgtccaaca 28441688

                              
Query: 293      tgccaaagtacacc 306
                ||||||||||||||
Sbjct: 28441689 tgccaaagtacacc 28441702
to top
>dbj|AP003455.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0519D04
          Length = 193068

 Score =  329 bits (166), Expect = 7e-87
 Identities = 220/238 (92%)
 Strand = Plus / Plus

                                                                          
Query: 365    cctgaaagcaagctgaatgcatgaagtgaccacaaggaagagctctaactgccgcacttg 424
              ||||||||||||||||||||||||| || ||||| |||||||||||||||||||| ||||
Sbjct: 158017 cctgaaagcaagctgaatgcatgaaatggccacagggaagagctctaactgccgcgcttg 158076

                                                                          
Query: 425    atgtgaataggaagtcgcaacagattggacagtttgtctctagccccttctcccgacatt 484
              |||| |||||||| || || |||||||||||||||||||||||||| |||||||| ||||
Sbjct: 158077 atgtaaataggaaatcacagcagattggacagtttgtctctagccctttctcccggcatt 158136

                                                                          
Query: 485    tgtgttctgttagtttcattccaaggcagcaattgcacttcatgcaatggaagaaatcaa 544
              |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 158137 tgtgttctgttaatttcatcccaaggcagcaattgcacttcatgcaatggaagaaatcaa 158196

                                                                        
Query: 545    caccaagacctttaccaagacgacacagattacaaaacggacaatgatacacagtcct 602
              ||||||||||||| |||||||| |||| ||||||||| || |||||||| ||||||||
Sbjct: 158197 caccaagacctttcccaagacggcacaaattacaaaatgggcaatgataaacagtcct 158254



 Score =  188 bits (95), Expect = 2e-44
 Identities = 128/139 (92%)
 Strand = Plus / Plus

                                                                          
Query: 99     ctagtttggggtagaacaatctgccgtatcagtcttgataactctggtattgtaagaacc 158
              ||||||||| |||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 156516 ctagtttggcgtagaacaatctgctgtatcggtcttgataactctggtattataagaacc 156575

                                                                          
Query: 159    acaggagccgcatttgtggtacagccaatgaaattgagatctcccttttctttcacagtc 218
              ||||||||||||||| ||||||| ||| |||||| |||| ||||||||||||||||| ||
Sbjct: 156576 acaggagccgcatttatggtacaaccagtgaaatcgagacctcccttttctttcacaatc 156635

                                 
Query: 219    attacaaagaatatcctga 237
              ||||||||| |||||||||
Sbjct: 156636 attacaaagtatatcctga 156654



 Score =  149 bits (75), Expect = 1e-32
 Identities = 93/99 (93%)
 Strand = Plus / Plus

                                                                          
Query: 600    cctttcatcatcgaaaaatttgcagatattacagtaatactttgccatggatagcccatt 659
              |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 159289 cctttcatcatcaaaaaatttgcagatgttacagtaatactttgccatggatagcccatt 159348

                                                     
Query: 660    gcaagatggagtttggcaattcggaccgacaggttgaac 698
              |||||| |||||||| ||||| ||||| |||||||||||
Sbjct: 159349 gcaagacggagtttgacaatttggaccaacaggttgaac 159387



 Score =  121 bits (61), Expect = 3e-24
 Identities = 64/65 (98%)
 Strand = Plus / Plus

                                                                          
Query: 304    accgccatatctcccaaggatttgcagcagataggacaagtgtagtgactgcaagtgtat 363
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 157666 accgccatatctcccaaggatttgcagcagataggacaagtgtagtgactacaagtgtat 157725

                   
Query: 364    gcctg 368
              |||||
Sbjct: 157726 gcctg 157730



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 67/74 (90%)
 Strand = Plus / Plus

                                                                          
Query: 233    cctgacacctatcacggtattcctcaggaagctcttcggcagccaacaacgcatcaagca 292
              ||||||||| ||||||||||||||||||||||||||| ||||||| ||| || || | ||
Sbjct: 156729 cctgacaccgatcacggtattcctcaggaagctcttcagcagccagcaaggcgtccaaca 156788

                            
Query: 293    tgccaaagtacacc 306
              ||||||||||||||
Sbjct: 156789 tgccaaagtacacc 156802
to top
>gb|AY103675.1| Zea mays PCO125717 mRNA sequence
          Length = 1581

 Score =  311 bits (157), Expect = 2e-81
 Identities = 403/485 (83%)
 Strand = Plus / Minus

                                                                        
Query: 214  cagtcattacaaagaatatcctgacacctatcacggtattcctcaggaagctcttcggca 273
            ||||| ||||| || |||||||| ||||  ||  |||||||||| ||||||| ||| |||
Sbjct: 1581 cagtcgttacacagtatatcctggcaccggtcctggtattcctctggaagctgttctgca 1522

                                                                        
Query: 274  gccaacaacgcatcaagcatgccaaagtacaccgccatatctcccaaggatttgcagcag 333
            |||| |||  |||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 1521 gccagcaaaccatcaagcatgccaaaatacaccgtcatatctcccaaggatttgcagcag 1462

                                                                        
Query: 334  ataggacaagtgtagtgactgcaagtgtatgcctgaaagcaagctgaatgcatgaagtga 393
            || ||||||||||||||  | ||||| ||||||||||| ||||| |||||||||||||| 
Sbjct: 1461 attggacaagtgtagtgggtacaagtatatgcctgaaaacaagccgaatgcatgaagtgg 1402

                                                                        
Query: 394  ccacaaggaagagctctaactgccgcacttgatgtgaataggaagtcgcaacagattgga 453
            |||||||||||  || |||||| |||||| ||||| || |  |||||||| |||||||||
Sbjct: 1401 ccacaaggaaggcctttaactggcgcactcgatgtaaacaaaaagtcgcagcagattgga 1342

                                                                        
Query: 454  cagtttgtctctagccccttctcccgacatttgtgttctgttagtttcattccaaggcag 513
            |||||  ||||||||  ||| ||||| ||||| |||||| | |  || || |||||||| 
Sbjct: 1341 cagttcatctctagcatcttttcccggcatttatgttctatcatctttatgccaaggcaa 1282

                                                                        
Query: 514  caattgcacttcatgcaatggaagaaatcaacaccaagacctttaccaagacgacacaga 573
            |||||||||||||||||||| || ||||||   || |  ||  | ||||| |||||||  
Sbjct: 1281 caattgcacttcatgcaatgaaaaaaatcagtgcccaatccgctcccaaggcgacacaag 1222

                                                                        
Query: 574  ttacaaaacggacaatgatacacagtcctttcatcatcgaaaaatttgcagatattacag 633
            || ||||| |||||||| || ||| |||||||||||||||| || ||||| ||  |||| 
Sbjct: 1221 ttgcaaaaaggacaatggtagacactcctttcatcatcgaagaacttgcatatgctacaa 1162

                                                                        
Query: 634  taatactttgccatggatagcccattgcaagatggagtttggcaattcggaccgacaggt 693
            |||||||| |||||||| || ||||||||||| || | ||| ||||| ||||| ||||||
Sbjct: 1161 taatacttggccatggacagtccattgcaagaaggggattgacaatttggaccaacaggt 1102

                 
Query: 694  tgaac 698
            |||||
Sbjct: 1101 tgaac 1097
to top
>ref|XM_475859.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2988

 Score =  212 bits (107), Expect = 1e-51
 Identities = 206/239 (86%)
 Strand = Plus / Minus

                                                                        
Query: 247  cggtattcctcaggaagctcttcggcagccaacaacgcatcaagcatgccaaagtacacc 306
            ||||||||||||||||||||||| || |||| |||  ||||||||||||||||||| || 
Sbjct: 2840 cggtattcctcaggaagctcttctgcggccagcaagccatcaagcatgccaaagtatact 2781

                                                                        
Query: 307  gccatatctcccaaggatttgcagcagataggacaagtgtagtgactgcaagtgtatgcc 366
            | ||||||||||||||||||  ||||||| || || ||||||||||| || ||||| |||
Sbjct: 2780 gtcatatctcccaaggatttagagcagattgggcaggtgtagtgactacaggtgtacgcc 2721

                                                                        
Query: 367  tgaaagcaagctgaatgcatgaagtgaccacaaggaagagctctaactgccgcacttgat 426
            ||||||||||||||||||||||| || |||||||| ||| || ||||||| ||||| |||
Sbjct: 2720 tgaaagcaagctgaatgcatgaaatggccacaaggtagacctttaactgctgcactcgat 2661

                                                                       
Query: 427  gtgaataggaagtcgcaacagattggacagtttgtctctagccccttctcccgacattt 485
            || |||||||||||||| |||||||| || ||  ||||||||  ||| || ||||||||
Sbjct: 2660 gtaaataggaagtcgcagcagattgggcaattcatctctagcatcttttctcgacattt 2602
to top
>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0079H23, complete sequence
          Length = 191765

 Score =  163 bits (82), Expect = 1e-36
 Identities = 199/238 (83%)
 Strand = Plus / Minus

                                                                         
Query: 365   cctgaaagcaagctgaatgcatgaagtgaccacaaggaagagctctaactgccgcacttg 424
             ||||||||||||||||||||||||| || |||||||| ||| || ||||||| ||||| |
Sbjct: 36126 cctgaaagcaagctgaatgcatgaaatggccacaaggtagacctttaactgctgcactcg 36067

                                                                         
Query: 425   atgtgaataggaagtcgcaacagattggacagtttgtctctagccccttctcccgacatt 484
             |||| |||||||||||||| |||||||| || ||  ||||||||  ||| || |||||||
Sbjct: 36066 atgtaaataggaagtcgcagcagattgggcaattcatctctagcatcttttctcgacatt 36007

                                                                         
Query: 485   tgtgttctgttagtttcattccaaggcagcaattgcacttcatgcaatggaagaaatcaa 544
             | || ||| | | |||||| || ||||| || |||||||||||||||||||| |||||||
Sbjct: 36006 tatgctctatcaatttcatgcccaggcaacagttgcacttcatgcaatggaaaaaatcaa 35947

                                                                       
Query: 545   caccaagacctttaccaagacgacacagattacaaaacggacaatgatacacagtcct 602
              ||| |  ||||  ||||||||||||| ||| ||||| || ||||| |||||| ||||
Sbjct: 35946 tacccaatccttgcccaagacgacacaaattgcaaaaggggcaatggtacacactcct 35889



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 106/125 (84%)
 Strand = Plus / Minus

                                                                         
Query: 112   gaacaatctgccgtatcagtcttgataactctggtattgtaagaaccacaggagccgcat 171
             |||||||| ||  ||||| ||||||||||||| || || || ||||| ||| ||||||||
Sbjct: 36709 gaacaatcagctctatcaatcttgataactctagtgttatatgaaccgcagaagccgcat 36650

                                                                         
Query: 172   ttgtggtacagccaatgaaattgagatctcccttttctttcacagtcattacaaagaata 231
             ||||| ||||||||||| ||  |||| || |||||||||||||| || |||||||| |||
Sbjct: 36649 ttgtgatacagccaatggaaccgagaccttccttttctttcacaatcgttacaaagtata 36590

                  
Query: 232   tcctg 236
             |||||
Sbjct: 36589 tcctg 36585



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                         
Query: 634   taatactttgccatggatagcccattgcaagatggagtttggcaattcggaccgacaggt 693
             |||||||||||||||||||||||||||||||| || || |||||||| ||||| || |||
Sbjct: 35749 taatactttgccatggatagcccattgcaagaaggggtctggcaatttggaccaactggt 35690

                  
Query: 694   tgaac 698
             |||||
Sbjct: 35689 tgaac 35685



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                     
Query: 247   cggtattcctcaggaagctcttcggcagccaacaacgcatcaagcatgccaaagta 302
             ||||||||||||||||||||||| || |||| |||  |||||||||||||||||||
Sbjct: 36497 cggtattcctcaggaagctcttctgcggccagcaagccatcaagcatgccaaagta 36442



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                         
Query: 309   catatctcccaaggatttgcagcagataggacaagtgtagtgactgcaagtgtatgcctg 368
             ||||||||||||||||||  ||||||| || || ||||||||||| || ||||| |||||
Sbjct: 36274 catatctcccaaggatttagagcagattgggcaggtgtagtgactacaggtgtacgcctg 36215

                
Query: 369   aaa 371
             |||
Sbjct: 36214 aaa 36212
to top
>gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560C03,
             complete sequence
          Length = 177861

 Score =  163 bits (82), Expect = 1e-36
 Identities = 199/238 (83%)
 Strand = Plus / Minus

                                                                         
Query: 365   cctgaaagcaagctgaatgcatgaagtgaccacaaggaagagctctaactgccgcacttg 424
             ||||||||||||||||||||||||| || |||||||| ||| || ||||||| ||||| |
Sbjct: 92554 cctgaaagcaagctgaatgcatgaaatggccacaaggtagacctttaactgctgcactcg 92495

                                                                         
Query: 425   atgtgaataggaagtcgcaacagattggacagtttgtctctagccccttctcccgacatt 484
             |||| |||||||||||||| |||||||| || ||  ||||||||  ||| || |||||||
Sbjct: 92494 atgtaaataggaagtcgcagcagattgggcaattcatctctagcatcttttctcgacatt 92435

                                                                         
Query: 485   tgtgttctgttagtttcattccaaggcagcaattgcacttcatgcaatggaagaaatcaa 544
             | || ||| | | |||||| || ||||| || |||||||||||||||||||| |||||||
Sbjct: 92434 tatgctctatcaatttcatgcccaggcaacagttgcacttcatgcaatggaaaaaatcaa 92375

                                                                       
Query: 545   caccaagacctttaccaagacgacacagattacaaaacggacaatgatacacagtcct 602
              ||| |  ||||  ||||||||||||| ||| ||||| || ||||| |||||| ||||
Sbjct: 92374 tacccaatccttgcccaagacgacacaaattgcaaaaggggcaatggtacacactcct 92317



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 106/125 (84%)
 Strand = Plus / Minus

                                                                         
Query: 112   gaacaatctgccgtatcagtcttgataactctggtattgtaagaaccacaggagccgcat 171
             |||||||| ||  ||||| ||||||||||||| || || || ||||| ||| ||||||||
Sbjct: 93137 gaacaatcagctctatcaatcttgataactctagtgttatatgaaccgcagaagccgcat 93078

                                                                         
Query: 172   ttgtggtacagccaatgaaattgagatctcccttttctttcacagtcattacaaagaata 231
             ||||| ||||||||||| ||  |||| || |||||||||||||| || |||||||| |||
Sbjct: 93077 ttgtgatacagccaatggaaccgagaccttccttttctttcacaatcgttacaaagtata 93018

                  
Query: 232   tcctg 236
             |||||
Sbjct: 93017 tcctg 93013



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                         
Query: 634   taatactttgccatggatagcccattgcaagatggagtttggcaattcggaccgacaggt 693
             |||||||||||||||||||||||||||||||| || || |||||||| ||||| || |||
Sbjct: 92177 taatactttgccatggatagcccattgcaagaaggggtctggcaatttggaccaactggt 92118

                  
Query: 694   tgaac 698
             |||||
Sbjct: 92117 tgaac 92113



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                     
Query: 247   cggtattcctcaggaagctcttcggcagccaacaacgcatcaagcatgccaaagta 302
             ||||||||||||||||||||||| || |||| |||  |||||||||||||||||||
Sbjct: 92925 cggtattcctcaggaagctcttctgcggccagcaagccatcaagcatgccaaagta 92870



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                         
Query: 309   catatctcccaaggatttgcagcagataggacaagtgtagtgactgcaagtgtatgcctg 368
             ||||||||||||||||||  ||||||| || || ||||||||||| || ||||| |||||
Sbjct: 92702 catatctcccaaggatttagagcagattgggcaggtgtagtgactacaggtgtacgcctg 92643

                
Query: 369   aaa 371
             |||
Sbjct: 92642 aaa 92640
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  163 bits (82), Expect = 1e-36
 Identities = 199/238 (83%)
 Strand = Plus / Minus

                                                                            
Query: 365      cctgaaagcaagctgaatgcatgaagtgaccacaaggaagagctctaactgccgcacttg 424
                ||||||||||||||||||||||||| || |||||||| ||| || ||||||| ||||| |
Sbjct: 27161158 cctgaaagcaagctgaatgcatgaaatggccacaaggtagacctttaactgctgcactcg 27161099

                                                                            
Query: 425      atgtgaataggaagtcgcaacagattggacagtttgtctctagccccttctcccgacatt 484
                |||| |||||||||||||| |||||||| || ||  ||||||||  ||| || |||||||
Sbjct: 27161098 atgtaaataggaagtcgcagcagattgggcaattcatctctagcatcttttctcgacatt 27161039

                                                                            
Query: 485      tgtgttctgttagtttcattccaaggcagcaattgcacttcatgcaatggaagaaatcaa 544
                | || ||| | | |||||| || ||||| || |||||||||||||||||||| |||||||
Sbjct: 27161038 tatgctctatcaatttcatgcccaggcaacagttgcacttcatgcaatggaaaaaatcaa 27160979

                                                                          
Query: 545      caccaagacctttaccaagacgacacagattacaaaacggacaatgatacacagtcct 602
                 ||| |  ||||  ||||||||||||| ||| ||||| || ||||| |||||| ||||
Sbjct: 27160978 tacccaatccttgcccaagacgacacaaattgcaaaaggggcaatggtacacactcct 27160921



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 106/125 (84%)
 Strand = Plus / Minus

                                                                            
Query: 112      gaacaatctgccgtatcagtcttgataactctggtattgtaagaaccacaggagccgcat 171
                |||||||| ||  ||||| ||||||||||||| || || || ||||| ||| ||||||||
Sbjct: 27161741 gaacaatcagctctatcaatcttgataactctagtgttatatgaaccgcagaagccgcat 27161682

                                                                            
Query: 172      ttgtggtacagccaatgaaattgagatctcccttttctttcacagtcattacaaagaata 231
                ||||| ||||||||||| ||  |||| || |||||||||||||| || |||||||| |||
Sbjct: 27161681 ttgtgatacagccaatggaaccgagaccttccttttctttcacaatcgttacaaagtata 27161622

                     
Query: 232      tcctg 236
                |||||
Sbjct: 27161621 tcctg 27161617



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                            
Query: 634      taatactttgccatggatagcccattgcaagatggagtttggcaattcggaccgacaggt 693
                |||||||||||||||||||||||||||||||| || || |||||||| ||||| || |||
Sbjct: 27160781 taatactttgccatggatagcccattgcaagaaggggtctggcaatttggaccaactggt 27160722

                     
Query: 694      tgaac 698
                |||||
Sbjct: 27160721 tgaac 27160717



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                        
Query: 247      cggtattcctcaggaagctcttcggcagccaacaacgcatcaagcatgccaaagta 302
                ||||||||||||||||||||||| || |||| |||  |||||||||||||||||||
Sbjct: 27161529 cggtattcctcaggaagctcttctgcggccagcaagccatcaagcatgccaaagta 27161474



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                            
Query: 309      catatctcccaaggatttgcagcagataggacaagtgtagtgactgcaagtgtatgcctg 368
                ||||||||||||||||||  ||||||| || || ||||||||||| || ||||| |||||
Sbjct: 27161306 catatctcccaaggatttagagcagattgggcaggtgtagtgactacaggtgtacgcctg 27161247

                   
Query: 369      aaa 371
                |||
Sbjct: 27161246 aaa 27161244
to top
>ref|NM_112713.2| Arabidopsis thaliana EMB2454; protein binding / ubiquitin-protein
            ligase/ zinc ion binding AT3G18290 (EMB2454) mRNA,
            complete cds
          Length = 4229

 Score =  161 bits (81), Expect = 4e-36
 Identities = 261/321 (81%)
 Strand = Plus / Minus

                                                                        
Query: 144  ggtattgtaagaaccacaggagccgcatttgtggtacagccaatgaaattgagatctccc 203
            |||||||||||||||||||   || ||||| ||||||| |||||| ||  | |   | ||
Sbjct: 4027 ggtattgtaagaaccacagctaccacatttatggtacaaccaatggaaccgtgtagttcc 3968

                                                                        
Query: 204  ttttctttcacagtcattacaaagaatatcctgacacctatcacggtattcctcaggaag 263
            ||| | |||||| |||||||| ||||| |||||||| | ||    ||||||||| |||||
Sbjct: 3967 tttgcgttcacaatcattacatagaatgtcctgacagcgatttttgtattcctctggaag 3908

                                                                        
Query: 264  ctcttcggcagccaacaacgcatcaagcatgccaaagtacaccgccatatctcccaagga 323
             ||||| ||||| ||||  ||||||||||| ||||| || || ||||||||||| || ||
Sbjct: 3907 ttcttctgcagctaacagtgcatcaagcataccaaaataaacagccatatctcctaatga 3848

                                                                        
Query: 324  tttgcagcagataggacaagtgtagtgactgcaagtgtatgcctgaaagcaagctgaatg 383
            ||| |  ||||| ||||| |||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 3847 ttttccacagattggacatgtgtagtgactgcaagtgtaagcctggaagcaagctgagtg 3788

                                                                        
Query: 384  catgaagtgaccacaaggaagagctctaactgccgcacttgatgtgaataggaagtcgca 443
            |||| |||||||||| || |  |||||||||||  |||| |||||||| || || |||||
Sbjct: 3787 catgtagtgaccacatggtaaggctctaactgcttcactcgatgtgaaaagaaattcgca 3728

                                 
Query: 444  acagattggacagtttgtctc 464
             ||||| || || ||||||||
Sbjct: 3727 gcagatggggcaatttgtctc 3707
to top
>gb|AY094471.1| Arabidopsis thaliana AT3g18290/MIE15_8 mRNA, complete cds
          Length = 4229

 Score =  161 bits (81), Expect = 4e-36
 Identities = 261/321 (81%)
 Strand = Plus / Minus

                                                                        
Query: 144  ggtattgtaagaaccacaggagccgcatttgtggtacagccaatgaaattgagatctccc 203
            |||||||||||||||||||   || ||||| ||||||| |||||| ||  | |   | ||
Sbjct: 4027 ggtattgtaagaaccacagctaccacatttatggtacaaccaatggaaccgtgtagttcc 3968

                                                                        
Query: 204  ttttctttcacagtcattacaaagaatatcctgacacctatcacggtattcctcaggaag 263
            ||| | |||||| |||||||| ||||| |||||||| | ||    ||||||||| |||||
Sbjct: 3967 tttgcgttcacaatcattacatagaatgtcctgacagcgatttttgtattcctctggaag 3908

                                                                        
Query: 264  ctcttcggcagccaacaacgcatcaagcatgccaaagtacaccgccatatctcccaagga 323
             ||||| ||||| ||||  ||||||||||| ||||| || || ||||||||||| || ||
Sbjct: 3907 ttcttctgcagctaacagtgcatcaagcataccaaaataaacagccatatctcctaatga 3848

                                                                        
Query: 324  tttgcagcagataggacaagtgtagtgactgcaagtgtatgcctgaaagcaagctgaatg 383
            ||| |  ||||| ||||| |||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 3847 ttttccacagattggacatgtgtagtgactgcaagtgtaagcctggaagcaagctgagtg 3788

                                                                        
Query: 384  catgaagtgaccacaaggaagagctctaactgccgcacttgatgtgaataggaagtcgca 443
            |||| |||||||||| || |  |||||||||||  |||| |||||||| || || |||||
Sbjct: 3787 catgtagtgaccacatggtaaggctctaactgcttcactcgatgtgaaaagaaattcgca 3728

                                 
Query: 444  acagattggacagtttgtctc 464
             ||||| || || ||||||||
Sbjct: 3727 gcagatggggcaatttgtctc 3707
to top
>gb|BT005819.1| Arabidopsis thaliana At3g18290/MIE15_8 gene, complete cds
          Length = 3765

 Score =  161 bits (81), Expect = 4e-36
 Identities = 261/321 (81%)
 Strand = Plus / Minus

                                                                        
Query: 144  ggtattgtaagaaccacaggagccgcatttgtggtacagccaatgaaattgagatctccc 203
            |||||||||||||||||||   || ||||| ||||||| |||||| ||  | |   | ||
Sbjct: 3714 ggtattgtaagaaccacagctaccacatttatggtacaaccaatggaaccgtgtagttcc 3655

                                                                        
Query: 204  ttttctttcacagtcattacaaagaatatcctgacacctatcacggtattcctcaggaag 263
            ||| | |||||| |||||||| ||||| |||||||| | ||    ||||||||| |||||
Sbjct: 3654 tttgcgttcacaatcattacatagaatgtcctgacagcgatttttgtattcctctggaag 3595

                                                                        
Query: 264  ctcttcggcagccaacaacgcatcaagcatgccaaagtacaccgccatatctcccaagga 323
             ||||| ||||| ||||  ||||||||||| ||||| || || ||||||||||| || ||
Sbjct: 3594 ttcttctgcagctaacagtgcatcaagcataccaaaataaacagccatatctcctaatga 3535

                                                                        
Query: 324  tttgcagcagataggacaagtgtagtgactgcaagtgtatgcctgaaagcaagctgaatg 383
            ||| |  ||||| ||||| |||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 3534 ttttccacagattggacatgtgtagtgactgcaagtgtaagcctggaagcaagctgagtg 3475

                                                                        
Query: 384  catgaagtgaccacaaggaagagctctaactgccgcacttgatgtgaataggaagtcgca 443
            |||| |||||||||| || |  |||||||||||  |||| |||||||| || || |||||
Sbjct: 3474 catgtagtgaccacatggtaaggctctaactgcttcactcgatgtgaaaagaaattcgca 3415

                                 
Query: 444  acagattggacagtttgtctc 464
             ||||| || || ||||||||
Sbjct: 3414 gcagatggggcaatttgtctc 3394
to top
>dbj|AP004915.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT16G15, TM0073,
             complete sequence
          Length = 90077

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 80/94 (85%)
 Strand = Plus / Plus

                                                                         
Query: 365   cctgaaagcaagctgaatgcatgaagtgaccacaaggaagagctctaactgccgcacttg 424
             ||||||||||||| ||||||||  |||| |||||||| |||||||| ||||  |||||||
Sbjct: 46257 cctgaaagcaagcagaatgcatatagtggccacaaggtagagctctgactggagcacttg 46316

                                               
Query: 425   atgtgaataggaagtcgcaacagattggacagtt 458
             ||||||||| |  |||||| || ||||| |||||
Sbjct: 46317 atgtgaataagtcgtcgcagcaaattgggcagtt 46350



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                         
Query: 304   accgccatatctcccaaggatttgcagcagataggacaagtgtagtgactgcaagtgtat 363
             ||||||||||||||||| || |||| |||||| ||||| ||||||||||| || ||||||
Sbjct: 46094 accgccatatctcccaatgacttgctgcagattggacatgtgtagtgactacaggtgtat 46153

                 
Query: 364   gcct 367
             ||||
Sbjct: 46154 gcct 46157



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                             
Query: 600   cctttcatcatcgaaaaatttgcagatattacagtaatactttgccat 647
             |||||||||||| ||||||||||| ||||| ||| |||| ||||||||
Sbjct: 52388 cctttcatcatcaaaaaatttgcatatattgcagaaatattttgccat 52435



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                            
Query: 256   tcaggaagctcttcggcagccaacaacgcatcaagcatgccaaagta 302
             ||||||||||| || |||||||| || ||||||||||| ||||||||
Sbjct: 45369 tcaggaagctcctcagcagccaataaggcatcaagcataccaaagta 45415
to top
>gb|AC135462.22| Medicago truncatula clone mth2-35o17, complete sequence
          Length = 118383

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                         
Query: 365   cctgaaagcaagctgaatgcatgaagtgaccacaaggaagagctctaactgccgcacttg 424
             ||||||||||||| ||||||||| |||| |||||||| |||||||| ||||  |||||||
Sbjct: 85592 cctgaaagcaagcagaatgcatgtagtggccacaaggcagagctctgactgtagcacttg 85651

                      
Query: 425   atgtgaata 433
             | |||||||
Sbjct: 85652 acgtgaata 85660



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                         
Query: 304   accgccatatctcccaaggatttgcagcagataggacaagtgtagtgactgcaagtgtat 363
             ||||||||||||||||| || |||| |||||| ||||| ||||||||||| | |||||||
Sbjct: 85438 accgccatatctcccaatgacttgctgcagattggacatgtgtagtgactacgagtgtat 85497

                 
Query: 364   gcct 367
             ||||
Sbjct: 85498 gcct 85501



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                             
Query: 600   cctttcatcatcgaaaaatttgcagatattacagtaatactttgccat 647
             |||||||||||||||||||||||| ||| | || || |||||||||||
Sbjct: 88242 cctttcatcatcgaaaaatttgcatatactgcaatagtactttgccat 88289



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                            
Query: 256   tcaggaagctcttcggcagccaacaacgcatcaagcatgccaaagta 302
             ||||| ||||| || |||||||| || ||||||||||| ||||||||
Sbjct: 85157 tcagggagctcctccgcagccaataaggcatcaagcataccaaagta 85203



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 508   aggcagcaattgcacttcatgcaatg 533
             |||||||||||||| |||||||||||
Sbjct: 85735 aggcagcaattgcatttcatgcaatg 85760



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 144   ggtattgtaagaaccacaggagccgcatttgtggtacagcca 185
             |||||||||||| ||||| || || |||||||| ||||||||
Sbjct: 84890 ggtattgtaagagccacaagatccacatttgtgatacagcca 84931
to top
>gb|AC150205.5| Medicago truncatula clone mth2-72l17, complete sequence
          Length = 130555

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 61/69 (88%)
 Strand = Plus / Minus

                                                                         
Query: 365   cctgaaagcaagctgaatgcatgaagtgaccacaaggaagagctctaactgccgcacttg 424
             ||||||||||||| ||||||||| |||| |||||||| |||||||| ||||  |||||||
Sbjct: 54992 cctgaaagcaagcagaatgcatgtagtggccacaaggcagagctctgactgtagcacttg 54933

                      
Query: 425   atgtgaata 433
             | |||||||
Sbjct: 54932 acgtgaata 54924



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                         
Query: 304   accgccatatctcccaaggatttgcagcagataggacaagtgtagtgactgcaagtgtat 363
             ||||||||||||||||| || |||| |||||| ||||| ||||||||||| | |||||||
Sbjct: 55146 accgccatatctcccaatgacttgctgcagattggacatgtgtagtgactacgagtgtat 55087

                 
Query: 364   gcct 367
             ||||
Sbjct: 55086 gcct 55083



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                             
Query: 600   cctttcatcatcgaaaaatttgcagatattacagtaatactttgccat 647
             |||||||||||||||||||||||| ||| | || || |||||||||||
Sbjct: 52342 cctttcatcatcgaaaaatttgcatatactgcaatagtactttgccat 52295



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 256   tcaggaagctcttcggcagccaacaacgcatcaagcatgccaaagta 302
             ||||| ||||| || |||||||| || ||||||||||| ||||||||
Sbjct: 55427 tcagggagctcctccgcagccaataaggcatcaagcataccaaagta 55381



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 144   ggtattgtaagaaccacaggagccgcatttgtggtacagcca 185
             |||||||||||| ||||| || || |||||||| ||||||||
Sbjct: 55694 ggtattgtaagagccacaagatccacatttgtgatacagcca 55653



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 508   aggcagcaattgcacttcatgcaatg 533
             |||||||||||||| |||||||||||
Sbjct: 54849 aggcagcaattgcatttcatgcaatg 54824
to top
>dbj|AP000414.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MIE15
          Length = 34067

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                         
Query: 307   gccatatctcccaaggatttgcagcagataggacaagtgtagtgactgcaagtgtatgcc 366
             ||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||| |||
Sbjct: 31959 gccatatctcctaatgattttccacagattggacatgtgtagtgactgcaagtgtaagcc 31900

                   
Query: 367   tgaaag 372
             ||||||
Sbjct: 31899 tgaaag 31894



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 83/100 (83%)
 Strand = Plus / Minus

                                                                         
Query: 365   cctgaaagcaagctgaatgcatgaagtgaccacaaggaagagctctaactgccgcacttg 424
             |||| ||||||||||| |||||| |||||||||| || |  |||||||||||  |||| |
Sbjct: 31814 cctggaagcaagctgagtgcatgtagtgaccacatggtaaggctctaactgcttcactcg 31755

                                                     
Query: 425   atgtgaataggaagtcgcaacagattggacagtttgtctc 464
             ||||||| || || ||||| ||||| || || ||||||||
Sbjct: 31754 atgtgaaaagaaattcgcagcagatggggcaatttgtctc 31715



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                
Query: 249   gtattcctcaggaagctcttcggcagccaacaacgcatcaagcatgccaaa 299
             ||||||||| ||||| ||||| ||||| ||||  ||||||||||| |||||
Sbjct: 32119 gtattcctctggaagttcttctgcagctaacagtgcatcaagcataccaaa 32069



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                          
Query: 144   ggtattgtaagaaccacaggagccgcatttgtggtacagccaatg 188
             |||||||||||||||||||   || ||||| ||||||| ||||||
Sbjct: 32305 ggtattgtaagaaccacagctaccacatttatggtacaaccaatg 32261
to top
>gb|AY110875.1| Zea mays CL7155_-2 mRNA sequence
          Length = 637

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                  
Query: 98  gctagtttggggtagaacaatctgccgtatcagtcttgataactctggtattgta 152
           |||| ||||| || || |||||||| || |||||||||||||||| |||||||||
Sbjct: 366 gctaatttggtgtggagcaatctgcagtgtcagtcttgataactcgggtattgta 312
to top
>ref|NM_106134.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/
           zinc ion binding AT1G74760 mRNA, complete cds
          Length = 768

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 365 cctgaaagcaagctgaatgcatgaagtgaccacaaggaagagc 407
           |||||||||| |  || ||||| ||||||||||||||||||||
Sbjct: 535 cctgaaagcatgtggagtgcatcaagtgaccacaaggaagagc 493
to top
>gb|BT011670.1| Arabidopsis thaliana At1g74760 mRNA, complete cds
          Length = 768

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 365 cctgaaagcaagctgaatgcatgaagtgaccacaaggaagagc 407
           |||||||||| |  || ||||| ||||||||||||||||||||
Sbjct: 535 cctgaaagcatgtggagtgcatcaagtgaccacaaggaagagc 493
to top
>gb|DQ086838.1| Arabidopsis thaliana At1g74760 mRNA, complete cds
          Length = 768

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 365 cctgaaagcaagctgaatgcatgaagtgaccacaaggaagagc 407
           |||||||||| |  || ||||| ||||||||||||||||||||
Sbjct: 535 cctgaaagcatgtggagtgcatcaagtgaccacaaggaagagc 493
to top
>gb|AC008263.2|F25A4 Arabidopsis thaliana chromosome 1 BAC F25A4 sequence, complete sequence
          Length = 115721

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                        
Query: 365   cctgaaagcaagctgaatgcatgaagtgaccacaaggaagagc 407
             |||||||||| |  || ||||| ||||||||||||||||||||
Sbjct: 84830 cctgaaagcatgtggagtgcatcaagtgaccacaaggaagagc 84788
to top
>gb|AC166932.6| Mus musculus chromosome 7, clone RP23-349I13, complete sequence
          Length = 226889

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 481    catttgtgttctgttagtttc 501
              |||||||||||||||||||||
Sbjct: 210244 catttgtgttctgttagtttc 210224



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 481   catttgtgttctgttagtttc 501
             |||||||||||||||||||||
Sbjct: 82157 catttgtgttctgttagtttc 82137
to top
>gb|AC113065.16| Mus musculus chromosome 7, clone RP23-263E7, complete sequence
          Length = 202134

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 481    catttgtgttctgttagtttc 501
              |||||||||||||||||||||
Sbjct: 142730 catttgtgttctgttagtttc 142750
to top
>ref|XM_361436.1| Magnaporthe grisea 70-15 hypothetical protein (MG03910.4) partial
           mRNA
          Length = 876

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 269 cggcagccaacaacgcatcaa 289
           |||||||||||||||||||||
Sbjct: 536 cggcagccaacaacgcatcaa 556
to top
>gb|AC158340.9| Mus musculus chromosome 1, clone RP24-161N8, complete sequence
          Length = 163123

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 198    tctcccttttctttcacagtc 218
              |||||||||||||||||||||
Sbjct: 117129 tctcccttttctttcacagtc 117109
to top
>gb|AC102781.5| Mus musculus chromosome 1, clone RP23-271G2, complete sequence
          Length = 198393

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 198    tctcccttttctttcacagtc 218
              |||||||||||||||||||||
Sbjct: 132420 tctcccttttctttcacagtc 132440
to top
>emb|Z96811.2|HS52D1 Human DNA sequence from clone RP1-52D1 on chromosome Xq21, complete
             sequence
          Length = 148691

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 67    acaaaactagaaaagaaagaa 87
             |||||||||||||||||||||
Sbjct: 27135 acaaaactagaaaagaaagaa 27115
to top
>emb|AL450336.7| Human DNA sequence from clone RP11-24C14 on chromosome 6, complete
             sequence
          Length = 125507

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 62    aagagacaaaactagaaaaga 82
             |||||||||||||||||||||
Sbjct: 66621 aagagacaaaactagaaaaga 66601
to top
>emb|AL139379.14| Human DNA sequence from clone RP11-358P11 on chromosome 13 Contains a CpG
              island, complete sequence
          Length = 166237

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 365    cctgaaagcaagctgaatgca 385
              |||||||||||||||||||||
Sbjct: 152597 cctgaaagcaagctgaatgca 152577
to top
>gb|AC174673.2| Mus musculus BAC clone RP24-435P4 from chromosome 7, complete sequence
          Length = 140309

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 481    catttgtgttctgttagtttc 501
              |||||||||||||||||||||
Sbjct: 103210 catttgtgttctgttagtttc 103190
to top
>gb|AC114784.3| Homo sapiens BAC clone RP11-605G9 from 4, complete sequence
          Length = 49691

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 67    acaaaactagaaaagaaagaa 87
             |||||||||||||||||||||
Sbjct: 30211 acaaaactagaaaagaaagaa 30191
to top
>ref|XM_625447.1| Cryptosporidium parvum Iowa II ORC/CDC6 like AAA+ ATpase
           (cgd4_4320), partial mRNA
          Length = 2607

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 54  atatttacaagagacaaaact 74
           |||||||||||||||||||||
Sbjct: 810 atatttacaagagacaaaact 790
to top
>gb|AC007707.14| Homo sapiens chromosome 11 clone rp11-442e11 map 11q23, complete
             sequence
          Length = 188963

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 62    aagagacaaaactagaaaaga 82
             |||||||||||||||||||||
Sbjct: 38017 aagagacaaaactagaaaaga 38037
to top
>gb|AC154205.1| Mus musculus BAC clone RP24-88I1 from chromosome 14, complete sequence
          Length = 219623

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 39     agattctgtaagactatattt 59
              |||||||||||||||||||||
Sbjct: 133957 agattctgtaagactatattt 133937
to top
>gb|AC165150.3| Mus musculus BAC clone RP24-105I10 from chromosome 7, complete sequence
          Length = 210763

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 481   catttgtgttctgttagtttc 501
             |||||||||||||||||||||
Sbjct: 77047 catttgtgttctgttagtttc 77027
to top
>dbj|AP006216.1| Homo sapiens genomic DNA, chromosome 11, clone:RP11-87O6, complete
             sequence
          Length = 177334

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 62    aagagacaaaactagaaaaga 82
             |||||||||||||||||||||
Sbjct: 41396 aagagacaaaactagaaaaga 41416
to top
>gb|AC174672.2| Mus musculus BAC clone RP24-566B4 from chromosome 7, complete sequence
          Length = 167219

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 481    catttgtgttctgttagtttc 501
              |||||||||||||||||||||
Sbjct: 107452 catttgtgttctgttagtttc 107472
to top
>gb|AC002037.1|AC002037 Human Chromosome 11 Overlapping Cosmids cSRL72g7 and cSRL140b8,
            complete sequence
          Length = 53897

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 62   aagagacaaaactagaaaaga 82
            |||||||||||||||||||||
Sbjct: 5193 aagagacaaaactagaaaaga 5173
to top
>dbj|AB048971.1| Macaca fascicularis brain cDNA, clone:QnpA-11984
          Length = 1949

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 199  ctcccttttctttcacagtca 219
            |||||||||||||||||||||
Sbjct: 1283 ctcccttttctttcacagtca 1303
to top
>gb|AC007581.6| Drosophila melanogaster clone BACR03I24, complete sequence
          Length = 163517

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 669    agtttggcaattcggaccgacagg 692
              |||||||||||| |||||||||||
Sbjct: 141058 agtttggcaattgggaccgacagg 141035
to top
>gb|AC099037.2| Drosophila melanogaster clone BACR27P17, complete sequence
          Length = 193320

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 669    agtttggcaattcggaccgacagg 692
              |||||||||||| |||||||||||
Sbjct: 144901 agtttggcaattgggaccgacagg 144924
to top
>gb|AY528719.1| Homo sapiens estrogen-related receptor gamma (ESRRG) gene, complete cds
          Length = 590284

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     tacaagagacaaaactagaa 78
              ||||||||||||||||||||
Sbjct: 561263 tacaagagacaaaactagaa 561244
to top
>gb|AY330343.1| Odocoileus hemionus prion protein (prnp) gene, complete cds
          Length = 65476

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    tatttacaagagacaaaact 74
             ||||||||||||||||||||
Sbjct: 16803 tatttacaagagacaaaact 16784
to top
>gb|AC122383.4| Mus musculus BAC clone RP23-479O8 from chromosome 7, complete sequence
          Length = 196195

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 147    attgtaagaaccacaggagc 166
              ||||||||||||||||||||
Sbjct: 116443 attgtaagaaccacaggagc 116462
to top
>emb|AL512650.8| Human DNA sequence from clone RP11-23B9 on chromosome 1 Contains part
             of the ESRRG gene for  estrogen-related receptor gamma,
             complete sequence
          Length = 57317

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    tacaagagacaaaactagaa 78
             ||||||||||||||||||||
Sbjct: 16350 tacaagagacaaaactagaa 16369
to top
>emb|AL355975.10| Human DNA sequence from clone RP11-468C2 on chromosome 9, complete
             sequence
          Length = 131705

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    tctgtaagactatatttaca 62
             ||||||||||||||||||||
Sbjct: 68264 tctgtaagactatatttaca 68245
to top
>gb|AC099466.7| Rattus norvegicus 4 BAC CH230-63I9 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 227298

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    agacaaaactagaaaagaaa 84
             ||||||||||||||||||||
Sbjct: 48878 agacaaaactagaaaagaaa 48897
to top
>emb|CR954196.1| Medicago truncatula chromosome 5 clone mth2-157e5, COMPLETE SEQUENCE
          Length = 132419

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 133   ttgataactctggtattgtaagaaccac 160
             |||| ||| |||||||||||||||||||
Sbjct: 13162 ttgacaacactggtattgtaagaaccac 13135
to top
>emb|CR380956.1| Candida glabrata strain CBS138 chromosome J complete sequence
          Length = 1192501

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 671    tttggcaattcggaccgacaggtt 694
              |||||||||||||||||| |||||
Sbjct: 359108 tttggcaattcggaccgaaaggtt 359131
to top
>emb|AL663039.18| Mouse DNA sequence from clone RP23-50H23 on chromosome 11 Contains a
              novel gene and a CpG island, complete sequence
          Length = 219899

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 65     agacaaaactagaaaagaaa 84
              ||||||||||||||||||||
Sbjct: 140786 agacaaaactagaaaagaaa 140767
to top
>emb|BX649539.6| Mouse DNA sequence from clone RP24-371A24 on chromosome 4 Contains a
             ribosomal protein S2 (Rps2) pseudogene, complete sequence
          Length = 198964

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 482   atttgtgttctgttagtttc 501
             ||||||||||||||||||||
Sbjct: 91645 atttgtgttctgttagtttc 91664
to top
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete
               sequence
          Length = 4332241

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 68      caaaactagaaaagaaagaatatt 91
               |||||||| |||||||||||||||
Sbjct: 3804357 caaaactaaaaaagaaagaatatt 3804334
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 419      cacttgatgtgaataggaag 438
                ||||||||||||||||||||
Sbjct: 17342166 cacttgatgtgaataggaag 17342185
to top
>gb|AC007925.5|AC007925 Drosophila melanogaster, chromosome 2R, region 60E-60E, BAC clone
             BACR03B07, complete sequence
          Length = 170089

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 669   agtttggcaattcggaccgacagg 692
             |||||||||||| |||||||||||
Sbjct: 63109 agtttggcaattgggaccgacagg 63086
to top
>gb|AC125238.5| Homo sapiens BAC clone RP11-711C24 from 2, complete sequence
          Length = 196622

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 535    aagaaatcaacaccaagacc 554
              ||||||||||||||||||||
Sbjct: 161060 aagaaatcaacaccaagacc 161041
to top
>gb|AC139713.1| Homo sapiens BAC clone RP11-481K16 from 4, complete sequence
          Length = 196020

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 63     agagacaaaactagaaaaga 82
              ||||||||||||||||||||
Sbjct: 117100 agagacaaaactagaaaaga 117081
to top
>ref|XM_213729.3| PREDICTED: Rattus norvegicus TAF6 RNA polymerase II, TATA box binding
            protein (TBP)-associated factor (predicted)
            (Taf6_predicted), mRNA
          Length = 2253

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 545  caccaagacctttaccaaga 564
            ||||||||||||||||||||
Sbjct: 1281 caccaagacctttaccaaga 1300
to top
>dbj|AP003620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0596H06
          Length = 142832

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 419   cacttgatgtgaataggaag 438
             ||||||||||||||||||||
Sbjct: 78759 cacttgatgtgaataggaag 78778
to top
>gb|AF225899.1|AF225899 Homo sapiens PAC clone 219d7, complete sequence
          Length = 106539

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 535    aagaaatcaacaccaagacc 554
              ||||||||||||||||||||
Sbjct: 103666 aagaaatcaacaccaagacc 103647
to top
>gb|AE003465.3| Drosophila melanogaster chromosome 2R, section 72 of 73 of the complete
             sequence
          Length = 343833

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 669   agtttggcaattcggaccgacagg 692
             |||||||||||| |||||||||||
Sbjct: 25262 agtttggcaattgggaccgacagg 25239
to top
>gb|BC100108.1| Rattus norvegicus TAF6 RNA polymerase II, TATA box binding protein
            (TBP)-associated factor, mRNA (cDNA clone MGC:112914
            IMAGE:7379862), complete cds
          Length = 2127

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 545  caccaagacctttaccaaga 564
            ||||||||||||||||||||
Sbjct: 1161 caccaagacctttaccaaga 1180
to top
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome
               I, complete sequence
          Length = 4277185

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 68      caaaactagaaaagaaagaatatt 91
               |||||||| |||||||||||||||
Sbjct: 3749765 caaaactaaaaaagaaagaatatt 3749742
to top
>emb|CT571261.1| Medicago truncatula chromosome 5 clone mth2-67l4, COMPLETE SEQUENCE
          Length = 136545

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 66    gacaaaactagaaaagaaag 85
             ||||||||||||||||||||
Sbjct: 46238 gacaaaactagaaaagaaag 46257
to top
>emb|AL953840.8| Mouse DNA sequence from clone RP23-152F6 on chromosome X, complete
             sequence
          Length = 138599

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 479   gacatttgtgttctgttagt 498
             ||||||||||||||||||||
Sbjct: 53686 gacatttgtgttctgttagt 53705
to top
>emb|CR956622.12| Pig DNA sequence from clone PigE-219N9 on chromosome 6, complete
             sequence
          Length = 174170

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 619   ttgcagatattacagtaata 638
             ||||||||||||||||||||
Sbjct: 60080 ttgcagatattacagtaata 60099
to top
>dbj|D49446.1|RATTFIIDSP Rat mRNA for TFIID subunit p80, complete cds
          Length = 2251

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 545  caccaagacctttaccaaga 564
            ||||||||||||||||||||
Sbjct: 1132 caccaagacctttaccaaga 1151


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,048,370
Number of Sequences: 3902068
Number of extensions: 7048370
Number of successful extensions: 211908
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 211435
Number of HSP's gapped (non-prelim): 468
length of query: 699
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 676
effective length of database: 17,143,297,704
effective search space: 11588869247904
effective search space used: 11588869247904
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top