ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal19a18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_506860.1| PREDICTED Oryza sativa (japonica cultivar-group... 367 3e-98
2ref|XM_466661.1| Oryza sativa (japonica cultivar-group), mRNA 367 3e-98
3dbj|AK120252.1| Oryza sativa (japonica cultivar-group) cDNA clon... 367 3e-98
4dbj|AK061315.1| Oryza sativa (japonica cultivar-group) cDNA clon... 367 3e-98
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 174 3e-40
6dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic D... 174 3e-40
7dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic D... 174 3e-40
8dbj|AP004881.2| Oryza sativa (japonica cultivar-group) genomic D... 174 3e-40
9dbj|AP005293.2| Oryza sativa (japonica cultivar-group) genomic D... 174 3e-40
10gb|AC007823.38| Homo sapiens 3 BAC RP11-255C15 (Roswell Park Can... 44 0.64
11ref|NM_203176.1| Arabidopsis thaliana unknown protein AT5G48335 ... 42 2.5
12gb|BT015648.1| Arabidopsis thaliana At5g48335 gene, complete cds 42 2.5
13gb|BT015141.1| Arabidopsis thaliana At5g48335 gene, complete cds 42 2.5
14emb|BX833580.1|CNS09Z0C Arabidopsis thaliana Full-length cDNA Co... 42 2.5
15emb|BX005446.8| Mouse DNA sequence from clone RP23-20G23 on chro... 42 2.5
16emb|BX649327.17| Zebrafish DNA sequence from clone CH211-197G15 ... 42 2.5
17ref|NM_179940.1| Arabidopsis thaliana ATGSL08 (GLUCAN SYNTHASE-L... 40 10.0
18ref|NM_001031192.1| Gallus gallus diacylglycerol kinase, zeta 10... 40 10.0
19ref|XM_506661.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 10.0
20ref|XM_960865.1| Encephalitozoon cuniculi GB-M1 hypothetical pro... 40 10.0
21gb|AC122820.4| Mus musculus BAC clone RP23-200M5 from chromosome... 40 10.0
22ref|XM_539636.2| PREDICTED: Canis familiaris similar to Patched ... 40 10.0
23gb|AC121969.3| Mus musculus BAC clone RP24-273J2 from chromosome... 40 10.0
24emb|AL365506.10| Human DNA sequence from clone RP11-640E12 on ch... 40 10.0
25emb|AL365495.14| Human DNA sequence from clone RP11-308K19 on ch... 40 10.0
26emb|AL022313.1|HS1119A7 Human DNA sequence from clone RP5-1119A7... 40 10.0
27emb|BX571774.9| Zebrafish DNA sequence from clone DKEY-250A19 in... 40 10.0
28emb|AL391737.2|CNS06C8G chromosome I of strain GB-M1 of Encephal... 40 10.0
29emb|AJ851406.1| Gallus gallus mRNA for hypothetical protein, clo... 40 10.0
30gb|AC163649.3| Mus musculus BAC clone RP24-372B10 from chromosom... 40 10.0
31dbj|AK123361.1| Homo sapiens cDNA FLJ41367 fis, clone BRCAN2005436 40 10.0
32gb|AC006922.7| Arabidopsis thaliana chromosome 2 clone T1J8 map ... 40 10.0
33dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 10.0
34gb|AC103895.3| Papio anubis clone RP41-397E13, complete sequence 40 10.0
35dbj|AP005702.3| Oryza sativa (japonica cultivar-group) genomic D... 40 10.0
36dbj|AK073073.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 10.0
37dbj|AK072517.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 10.0
38gb|U32945.1|HSU32945 Human immature B cell Ig heavy chain mRNA, ... 40 10.0
39gb|AC124344.6| Mus musculus BAC clone RP24-448A7 from 3, complet... 40 10.0
40gb|AC135237.6| Mus musculus BAC clone RP23-306F11 from chromosom... 40 10.0 
>ref|XM_506860.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0030C08.45
           mRNA
          Length = 1012

 Score =  367 bits (185), Expect = 3e-98
 Identities = 338/387 (87%), Gaps = 4/387 (1%)
 Strand = Plus / Minus

                                                                       
Query: 344 gaagttcatctgatgaggaagtttcatgtgaccttgaccccacgacgatccgccagatcc 403
           ||||||||||||||||||||||||||||||||| |||||||| || ||||| | ||||||
Sbjct: 506 gaagttcatctgatgaggaagtttcatgtgaccatgaccccatgatgatccactagatcc 447

                                                                       
Query: 404 agcgtacattactggtttatcaggggaatcatttg---ggtcattatacatgttcattgc 460
           || |||||| || || |||||||||||||||| ||   | ||||| |||| |||||||||
Sbjct: 446 agagtacatcaccggcttatcaggggaatcatatgactgatcattgtacaagttcattgc 387

                                                                       
Query: 461 agcagcccaacgttcactgagaagctgtgaagcctcactggcagaacatccttccaatgg 520
            ||||||||||| ||| |||||||||| | ||||||||||||| ||||||| ||||| ||
Sbjct: 386 tgcagcccaacggtcattgagaagctgggcagcctcactggcacaacatccctccaaggg 327

                                                                       
Query: 521 tactaatcttgcatggctgtaatcattttgagcattgctgacaaaagcatcatgatggat 580
           || ||||||||  || ||||||||||| |||| |||||||| |||||  |||||| ||||
Sbjct: 326 tattaatcttgtttgactgtaatcattctgaggattgctgaaaaaagtctcatgagggat 267

                                                                       
Query: 581 aattggaggaaggttctttagtgaaggaacatggctcttctctccatcattgttgtatga 640
           |||||| ||||||||||||| ||||||| |||||||||||||||||||||| |||||  |
Sbjct: 266 aattggtggaaggttctttaatgaaggagcatggctcttctctccatcattattgtacaa 207

                                                                       
Query: 641 atagttggctttctcagccctatctccagccttgcggcgattgtttgcacgattcctgtg 700
           |||  | || ||||||||||||||||||| |||||| |||||||| ||||| ||||||||
Sbjct: 206 ataactagccttctcagccctatctccagacttgcgtcgattgttagcacggttcctgtg 147

                                      
Query: 701 cacgggagggcgtgtatctcttgatgc 727
           |||||||||| ||||||||||||||||
Sbjct: 146 cacgggaggg-gtgtatctcttgatgc 121



 Score = 40.1 bits (20), Expect = 10.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 260 gcagcttgactttaattagttccaggtgttga 291
           |||||||||  || ||||||||||||||||||
Sbjct: 590 gcagcttgagcttgattagttccaggtgttga 559
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>ref|XM_466661.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 890

 Score =  367 bits (185), Expect = 3e-98
 Identities = 338/387 (87%), Gaps = 4/387 (1%)
 Strand = Plus / Minus

                                                                       
Query: 344 gaagttcatctgatgaggaagtttcatgtgaccttgaccccacgacgatccgccagatcc 403
           ||||||||||||||||||||||||||||||||| |||||||| || ||||| | ||||||
Sbjct: 531 gaagttcatctgatgaggaagtttcatgtgaccatgaccccatgatgatccactagatcc 472

                                                                       
Query: 404 agcgtacattactggtttatcaggggaatcatttg---ggtcattatacatgttcattgc 460
           || |||||| || || |||||||||||||||| ||   | ||||| |||| |||||||||
Sbjct: 471 agagtacatcaccggcttatcaggggaatcatatgactgatcattgtacaagttcattgc 412

                                                                       
Query: 461 agcagcccaacgttcactgagaagctgtgaagcctcactggcagaacatccttccaatgg 520
            ||||||||||| ||| |||||||||| | ||||||||||||| ||||||| ||||| ||
Sbjct: 411 tgcagcccaacggtcattgagaagctgggcagcctcactggcacaacatccctccaaggg 352

                                                                       
Query: 521 tactaatcttgcatggctgtaatcattttgagcattgctgacaaaagcatcatgatggat 580
           || ||||||||  || ||||||||||| |||| |||||||| |||||  |||||| ||||
Sbjct: 351 tattaatcttgtttgactgtaatcattctgaggattgctgaaaaaagtctcatgagggat 292

                                                                       
Query: 581 aattggaggaaggttctttagtgaaggaacatggctcttctctccatcattgttgtatga 640
           |||||| ||||||||||||| ||||||| |||||||||||||||||||||| |||||  |
Sbjct: 291 aattggtggaaggttctttaatgaaggagcatggctcttctctccatcattattgtacaa 232

                                                                       
Query: 641 atagttggctttctcagccctatctccagccttgcggcgattgtttgcacgattcctgtg 700
           |||  | || ||||||||||||||||||| |||||| |||||||| ||||| ||||||||
Sbjct: 231 ataactagccttctcagccctatctccagacttgcgtcgattgttagcacggttcctgtg 172

                                      
Query: 701 cacgggagggcgtgtatctcttgatgc 727
           |||||||||| ||||||||||||||||
Sbjct: 171 cacgggaggg-gtgtatctcttgatgc 146



 Score = 40.1 bits (20), Expect = 10.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 260 gcagcttgactttaattagttccaggtgttga 291
           |||||||||  || ||||||||||||||||||
Sbjct: 615 gcagcttgagcttgattagttccaggtgttga 584
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>dbj|AK120252.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045I01, full
           insert sequence
          Length = 890

 Score =  367 bits (185), Expect = 3e-98
 Identities = 338/387 (87%), Gaps = 4/387 (1%)
 Strand = Plus / Minus

                                                                       
Query: 344 gaagttcatctgatgaggaagtttcatgtgaccttgaccccacgacgatccgccagatcc 403
           ||||||||||||||||||||||||||||||||| |||||||| || ||||| | ||||||
Sbjct: 531 gaagttcatctgatgaggaagtttcatgtgaccatgaccccatgatgatccactagatcc 472

                                                                       
Query: 404 agcgtacattactggtttatcaggggaatcatttg---ggtcattatacatgttcattgc 460
           || |||||| || || |||||||||||||||| ||   | ||||| |||| |||||||||
Sbjct: 471 agagtacatcaccggcttatcaggggaatcatatgactgatcattgtacaagttcattgc 412

                                                                       
Query: 461 agcagcccaacgttcactgagaagctgtgaagcctcactggcagaacatccttccaatgg 520
            ||||||||||| ||| |||||||||| | ||||||||||||| ||||||| ||||| ||
Sbjct: 411 tgcagcccaacggtcattgagaagctgggcagcctcactggcacaacatccctccaaggg 352

                                                                       
Query: 521 tactaatcttgcatggctgtaatcattttgagcattgctgacaaaagcatcatgatggat 580
           || ||||||||  || ||||||||||| |||| |||||||| |||||  |||||| ||||
Sbjct: 351 tattaatcttgtttgactgtaatcattctgaggattgctgaaaaaagtctcatgagggat 292

                                                                       
Query: 581 aattggaggaaggttctttagtgaaggaacatggctcttctctccatcattgttgtatga 640
           |||||| ||||||||||||| ||||||| |||||||||||||||||||||| |||||  |
Sbjct: 291 aattggtggaaggttctttaatgaaggagcatggctcttctctccatcattattgtacaa 232

                                                                       
Query: 641 atagttggctttctcagccctatctccagccttgcggcgattgtttgcacgattcctgtg 700
           |||  | || ||||||||||||||||||| |||||| |||||||| ||||| ||||||||
Sbjct: 231 ataactagccttctcagccctatctccagacttgcgtcgattgttagcacggttcctgtg 172

                                      
Query: 701 cacgggagggcgtgtatctcttgatgc 727
           |||||||||| ||||||||||||||||
Sbjct: 171 cacgggaggg-gtgtatctcttgatgc 146



 Score = 40.1 bits (20), Expect = 10.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 260 gcagcttgactttaattagttccaggtgttga 291
           |||||||||  || ||||||||||||||||||
Sbjct: 615 gcagcttgagcttgattagttccaggtgttga 584
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>dbj|AK061315.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-D01, full
           insert sequence
          Length = 1014

 Score =  367 bits (185), Expect = 3e-98
 Identities = 338/387 (87%), Gaps = 4/387 (1%)
 Strand = Plus / Minus

                                                                       
Query: 344 gaagttcatctgatgaggaagtttcatgtgaccttgaccccacgacgatccgccagatcc 403
           ||||||||||||||||||||||||||||||||| |||||||| || ||||| | ||||||
Sbjct: 506 gaagttcatctgatgaggaagtttcatgtgaccatgaccccatgatgatccactagatcc 447

                                                                       
Query: 404 agcgtacattactggtttatcaggggaatcatttg---ggtcattatacatgttcattgc 460
           || |||||| || || |||||||||||||||| ||   | ||||| |||| |||||||||
Sbjct: 446 agagtacatcaccggcttatcaggggaatcatatgactgatcattgtacaagttcattgc 387

                                                                       
Query: 461 agcagcccaacgttcactgagaagctgtgaagcctcactggcagaacatccttccaatgg 520
            ||||||||||| ||| |||||||||| | ||||||||||||| ||||||| ||||| ||
Sbjct: 386 tgcagcccaacggtcattgagaagctgggcagcctcactggcacaacatccctccaaggg 327

                                                                       
Query: 521 tactaatcttgcatggctgtaatcattttgagcattgctgacaaaagcatcatgatggat 580
           || ||||||||  || ||||||||||| |||| |||||||| |||||  |||||| ||||
Sbjct: 326 tattaatcttgtttgactgtaatcattctgaggattgctgaaaaaagtctcatgagggat 267

                                                                       
Query: 581 aattggaggaaggttctttagtgaaggaacatggctcttctctccatcattgttgtatga 640
           |||||| ||||||||||||| ||||||| |||||||||||||||||||||| |||||  |
Sbjct: 266 aattggtggaaggttctttaatgaaggagcatggctcttctctccatcattattgtacaa 207

                                                                       
Query: 641 atagttggctttctcagccctatctccagccttgcggcgattgtttgcacgattcctgtg 700
           |||  | || ||||||||||||||||||| |||||| |||||||| ||||| ||||||||
Sbjct: 206 ataactagccttctcagccctatctccagacttgcgtcgattgttagcacggttcctgtg 147

                                      
Query: 701 cacgggagggcgtgtatctcttgatgc 727
           |||||||||| ||||||||||||||||
Sbjct: 146 cacgggaggg-gtgtatctcttgatgc 121



 Score = 40.1 bits (20), Expect = 10.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 260 gcagcttgactttaattagttccaggtgttga 291
           |||||||||  || ||||||||||||||||||
Sbjct: 590 gcagcttgagcttgattagttccaggtgttga 559
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  174 bits (88), Expect = 3e-40
 Identities = 163/188 (86%)
 Strand = Plus / Minus

                                                                            
Query: 478      tgagaagctgtgaagcctcactggcagaacatccttccaatggtactaatcttgcatggc 537
                |||||||||| | ||||||||||||| ||||||| ||||| |||| ||||||||  || |
Sbjct: 23931108 tgagaagctgggcagcctcactggcacaacatccctccaagggtattaatcttgtttgac 23931049

                                                                            
Query: 538      tgtaatcattttgagcattgctgacaaaagcatcatgatggataattggaggaaggttct 597
                |||||||||| |||| |||||||| |||||  |||||| |||||||||| ||||||||||
Sbjct: 23931048 tgtaatcattctgaggattgctgaaaaaagtctcatgagggataattggtggaaggttct 23930989

                                                                            
Query: 598      ttagtgaaggaacatggctcttctctccatcattgttgtatgaatagttggctttctcag 657
                ||| ||||||| |||||||||||||||||||||| |||||  ||||  | || |||||||
Sbjct: 23930988 ttaatgaaggagcatggctcttctctccatcattattgtacaaataactagccttctcag 23930929

                        
Query: 658      ccctatct 665
                ||||||||
Sbjct: 23930928 ccctatct 23930921



 Score =  174 bits (88), Expect = 3e-40
 Identities = 163/188 (86%)
 Strand = Plus / Plus

                                                                            
Query: 478      tgagaagctgtgaagcctcactggcagaacatccttccaatggtactaatcttgcatggc 537
                |||||||||| | ||||||||||||| ||||||| ||||| |||| ||||||||  || |
Sbjct: 23438479 tgagaagctgggcagcctcactggcacaacatccctccaagggtattaatcttgtttgac 23438538

                                                                            
Query: 538      tgtaatcattttgagcattgctgacaaaagcatcatgatggataattggaggaaggttct 597
                |||||||||| |||| |||||||| |||||  |||||| |||||||||| ||||||||||
Sbjct: 23438539 tgtaatcattctgaggattgctgaaaaaagtctcatgagggataattggtggaaggttct 23438598

                                                                            
Query: 598      ttagtgaaggaacatggctcttctctccatcattgttgtatgaatagttggctttctcag 657
                ||| ||||||| |||||||||||||||||||||| |||||  ||||  | || |||||||
Sbjct: 23438599 ttaatgaaggagcatggctcttctctccatcattattgtacaaataactagccttctcag 23438658

                        
Query: 658      ccctatct 665
                ||||||||
Sbjct: 23438659 ccctatct 23438666



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                            
Query: 353      ctgatgaggaagtttcatgtgaccttgaccccacgacgatccgccagatccagcgtacat 412
                |||||||||||||||||||||||| |||||||| || ||||| | |||||||| ||||||
Sbjct: 23932430 ctgatgaggaagtttcatgtgaccatgaccccatgatgatccactagatccagagtacat 23932371



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                            
Query: 353      ctgatgaggaagtttcatgtgaccttgaccccacgacgatccgccagatccagcgtacat 412
                |||||||||||||||||||||||| |||||||| || ||||| | |||||||| ||||||
Sbjct: 23437159 ctgatgaggaagtttcatgtgaccatgaccccatgatgatccactagatccagagtacat 23437218



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 32/33 (96%), Gaps = 1/33 (3%)
 Strand = Plus / Minus

                                                 
Query: 695      cctgtgcacgggagggcgtgtatctcttgatgc 727
                |||||||||||||||| ||||||||||||||||
Sbjct: 23928971 cctgtgcacgggaggg-gtgtatctcttgatgc 23928940



 Score = 40.1 bits (20), Expect = 10.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 260      gcagcttgactttaattagttccaggtgttga 291
                |||||||||  || ||||||||||||||||||
Sbjct: 23932612 gcagcttgagcttgattagttccaggtgttga 23932581



 Score = 40.1 bits (20), Expect = 10.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 260      gcagcttgactttaattagttccaggtgttga 291
                |||||||||  || ||||||||||||||||||
Sbjct: 23436977 gcagcttgagcttgattagttccaggtgttga 23437008
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>dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1791_B03
          Length = 166214

 Score =  174 bits (88), Expect = 3e-40
 Identities = 163/188 (86%)
 Strand = Plus / Plus

                                                                        
Query: 478  tgagaagctgtgaagcctcactggcagaacatccttccaatggtactaatcttgcatggc 537
            |||||||||| | ||||||||||||| ||||||| ||||| |||| ||||||||  || |
Sbjct: 4162 tgagaagctgggcagcctcactggcacaacatccctccaagggtattaatcttgtttgac 4221

                                                                        
Query: 538  tgtaatcattttgagcattgctgacaaaagcatcatgatggataattggaggaaggttct 597
            |||||||||| |||| |||||||| |||||  |||||| |||||||||| ||||||||||
Sbjct: 4222 tgtaatcattctgaggattgctgaaaaaagtctcatgagggataattggtggaaggttct 4281

                                                                        
Query: 598  ttagtgaaggaacatggctcttctctccatcattgttgtatgaatagttggctttctcag 657
            ||| ||||||| |||||||||||||||||||||| |||||  ||||  | || |||||||
Sbjct: 4282 ttaatgaaggagcatggctcttctctccatcattattgtacaaataactagccttctcag 4341

                    
Query: 658  ccctatct 665
            ||||||||
Sbjct: 4342 ccctatct 4349



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                        
Query: 353  ctgatgaggaagtttcatgtgaccttgaccccacgacgatccgccagatccagcgtacat 412
            |||||||||||||||||||||||| |||||||| || ||||| | |||||||| ||||||
Sbjct: 2842 ctgatgaggaagtttcatgtgaccatgaccccatgatgatccactagatccagagtacat 2901



 Score = 40.1 bits (20), Expect = 10.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 260  gcagcttgactttaattagttccaggtgttga 291
            |||||||||  || ||||||||||||||||||
Sbjct: 2660 gcagcttgagcttgattagttccaggtgttga 2691
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>dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0030C08
          Length = 163423

 Score =  174 bits (88), Expect = 3e-40
 Identities = 163/188 (86%)
 Strand = Plus / Minus

                                                                          
Query: 478    tgagaagctgtgaagcctcactggcagaacatccttccaatggtactaatcttgcatggc 537
              |||||||||| | ||||||||||||| ||||||| ||||| |||| ||||||||  || |
Sbjct: 152774 tgagaagctgggcagcctcactggcacaacatccctccaagggtattaatcttgtttgac 152715

                                                                          
Query: 538    tgtaatcattttgagcattgctgacaaaagcatcatgatggataattggaggaaggttct 597
              |||||||||| |||| |||||||| |||||  |||||| |||||||||| ||||||||||
Sbjct: 152714 tgtaatcattctgaggattgctgaaaaaagtctcatgagggataattggtggaaggttct 152655

                                                                          
Query: 598    ttagtgaaggaacatggctcttctctccatcattgttgtatgaatagttggctttctcag 657
              ||| ||||||| |||||||||||||||||||||| |||||  ||||  | || |||||||
Sbjct: 152654 ttaatgaaggagcatggctcttctctccatcattattgtacaaataactagccttctcag 152595

                      
Query: 658    ccctatct 665
              ||||||||
Sbjct: 152594 ccctatct 152587



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                          
Query: 353    ctgatgaggaagtttcatgtgaccttgaccccacgacgatccgccagatccagcgtacat 412
              |||||||||||||||||||||||| |||||||| || ||||| | |||||||| ||||||
Sbjct: 154096 ctgatgaggaagtttcatgtgaccatgaccccatgatgatccactagatccagagtacat 154037



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 32/33 (96%), Gaps = 1/33 (3%)
 Strand = Plus / Minus

                                               
Query: 695    cctgtgcacgggagggcgtgtatctcttgatgc 727
              |||||||||||||||| ||||||||||||||||
Sbjct: 150637 cctgtgcacgggaggg-gtgtatctcttgatgc 150606



 Score = 40.1 bits (20), Expect = 10.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 260    gcagcttgactttaattagttccaggtgttga 291
              |||||||||  || ||||||||||||||||||
Sbjct: 154278 gcagcttgagcttgattagttccaggtgttga 154247
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>dbj|AP004881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0496E03
          Length = 138622

 Score =  174 bits (88), Expect = 3e-40
 Identities = 163/188 (86%)
 Strand = Plus / Minus

                                                                         
Query: 478   tgagaagctgtgaagcctcactggcagaacatccttccaatggtactaatcttgcatggc 537
             |||||||||| | ||||||||||||| ||||||| ||||| |||| ||||||||  || |
Sbjct: 65072 tgagaagctgggcagcctcactggcacaacatccctccaagggtattaatcttgtttgac 65013

                                                                         
Query: 538   tgtaatcattttgagcattgctgacaaaagcatcatgatggataattggaggaaggttct 597
             |||||||||| |||| |||||||| |||||  |||||| |||||||||| ||||||||||
Sbjct: 65012 tgtaatcattctgaggattgctgaaaaaagtctcatgagggataattggtggaaggttct 64953

                                                                         
Query: 598   ttagtgaaggaacatggctcttctctccatcattgttgtatgaatagttggctttctcag 657
             ||| ||||||| |||||||||||||||||||||| |||||  ||||  | || |||||||
Sbjct: 64952 ttaatgaaggagcatggctcttctctccatcattattgtacaaataactagccttctcag 64893

                     
Query: 658   ccctatct 665
             ||||||||
Sbjct: 64892 ccctatct 64885



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                         
Query: 353   ctgatgaggaagtttcatgtgaccttgaccccacgacgatccgccagatccagcgtacat 412
             |||||||||||||||||||||||| |||||||| || ||||| | |||||||| ||||||
Sbjct: 66394 ctgatgaggaagtttcatgtgaccatgaccccatgatgatccactagatccagagtacat 66335



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 32/33 (96%), Gaps = 1/33 (3%)
 Strand = Plus / Minus

                                              
Query: 695   cctgtgcacgggagggcgtgtatctcttgatgc 727
             |||||||||||||||| ||||||||||||||||
Sbjct: 62935 cctgtgcacgggaggg-gtgtatctcttgatgc 62904



 Score = 40.1 bits (20), Expect = 10.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 260   gcagcttgactttaattagttccaggtgttga 291
             |||||||||  || ||||||||||||||||||
Sbjct: 66576 gcagcttgagcttgattagttccaggtgttga 66545
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>dbj|AP005293.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1653_F07, complete sequence
          Length = 110109

 Score =  174 bits (88), Expect = 3e-40
 Identities = 163/188 (86%)
 Strand = Plus / Plus

                                                                         
Query: 478   tgagaagctgtgaagcctcactggcagaacatccttccaatggtactaatcttgcatggc 537
             |||||||||| | ||||||||||||| ||||||| ||||| |||| ||||||||  || |
Sbjct: 57154 tgagaagctgggcagcctcactggcacaacatccctccaagggtattaatcttgtttgac 57213

                                                                         
Query: 538   tgtaatcattttgagcattgctgacaaaagcatcatgatggataattggaggaaggttct 597
             |||||||||| |||| |||||||| |||||  |||||| |||||||||| ||||||||||
Sbjct: 57214 tgtaatcattctgaggattgctgaaaaaagtctcatgagggataattggtggaaggttct 57273

                                                                         
Query: 598   ttagtgaaggaacatggctcttctctccatcattgttgtatgaatagttggctttctcag 657
             ||| ||||||| |||||||||||||||||||||| |||||  ||||  | || |||||||
Sbjct: 57274 ttaatgaaggagcatggctcttctctccatcattattgtacaaataactagccttctcag 57333

                     
Query: 658   ccctatct 665
             ||||||||
Sbjct: 57334 ccctatct 57341



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                         
Query: 353   ctgatgaggaagtttcatgtgaccttgaccccacgacgatccgccagatccagcgtacat 412
             |||||||||||||||||||||||| |||||||| || ||||| | |||||||| ||||||
Sbjct: 55834 ctgatgaggaagtttcatgtgaccatgaccccatgatgatccactagatccagagtacat 55893



 Score = 40.1 bits (20), Expect = 10.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 260   gcagcttgactttaattagttccaggtgttga 291
             |||||||||  || ||||||||||||||||||
Sbjct: 55652 gcagcttgagcttgattagttccaggtgttga 55683
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>gb|AC007823.38| Homo sapiens 3 BAC RP11-255C15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 127759

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 526   atcttgcatggctgtaatcatt 547
             ||||||||||||||||||||||
Sbjct: 48671 atcttgcatggctgtaatcatt 48650
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>ref|NM_203176.1| Arabidopsis thaliana unknown protein AT5G48335 mRNA, complete cds
          Length = 662

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 455 cattgcagcagcccaacgttcactgagaagctg 487
           ||||||||| | |||||| ||||||||||||||
Sbjct: 336 cattgcagctgtccaacgatcactgagaagctg 304
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>gb|BT015648.1| Arabidopsis thaliana At5g48335 gene, complete cds
          Length = 345

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 455 cattgcagcagcccaacgttcactgagaagctg 487
           ||||||||| | |||||| ||||||||||||||
Sbjct: 258 cattgcagctgtccaacgatcactgagaagctg 226
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>gb|BT015141.1| Arabidopsis thaliana At5g48335 gene, complete cds
          Length = 604

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 455 cattgcagcagcccaacgttcactgagaagctg 487
           ||||||||| | |||||| ||||||||||||||
Sbjct: 324 cattgcagctgtccaacgatcactgagaagctg 292
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>emb|BX833580.1|CNS09Z0C Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL63ZD01 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 632

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 455 cattgcagcagcccaacgttcactgagaagctg 487
           ||||||||| | |||||| ||||||||||||||
Sbjct: 336 cattgcagctgtccaacgatcactgagaagctg 304
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>emb|BX005446.8| Mouse DNA sequence from clone RP23-20G23 on chromosome X, complete
             sequence
          Length = 159892

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 272   taattagttccaggtgttgag 292
             |||||||||||||||||||||
Sbjct: 95220 taattagttccaggtgttgag 95240
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>emb|BX649327.17| Zebrafish DNA sequence from clone CH211-197G15 in linkage group 22,
              complete sequence
          Length = 206348

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 13     ggacattgtgaaggcgagtaa 33
              |||||||||||||||||||||
Sbjct: 111759 ggacattgtgaaggcgagtaa 111739
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>ref|NM_179940.1| Arabidopsis thaliana ATGSL08 (GLUCAN SYNTHASE-LIKE 8);
            1,3-beta-glucan synthase/ transferase, transferring
            glycosyl groups AT2G36850 (ATGSL08) mRNA, complete cds
          Length = 5281

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 331  gcagatcttcaaggaagttcatctgatg 358
            ||||||||||||| ||||||| ||||||
Sbjct: 2743 gcagatcttcaagcaagttcaactgatg 2770
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>ref|NM_001031192.1| Gallus gallus diacylglycerol kinase, zeta 104kDa (DGKZ), mRNA
          Length = 4728

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 644  gttggctttctcagccctat 663
            ||||||||||||||||||||
Sbjct: 2866 gttggctttctcagccctat 2847
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>ref|XM_506661.1| PREDICTED Oryza sativa (japonica cultivar-group), P0027G10.36-1
           mRNA
          Length = 917

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 515 caatggtactaatcttgcat 534
           ||||||||||||||||||||
Sbjct: 758 caatggtactaatcttgcat 739
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>ref|XM_960865.1| Encephalitozoon cuniculi GB-M1 hypothetical protein (ECU01_1200)
            partial mRNA
          Length = 1131

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 533  atggctgtaatcattttgagcatt 556
            |||||||||| |||||||||||||
Sbjct: 1038 atggctgtaaacattttgagcatt 1015
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>gb|AC122820.4| Mus musculus BAC clone RP23-200M5 from chromosome 6, complete sequence
          Length = 215238

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 650   tttctcagccctatctccag 669
             ||||||||||||||||||||
Sbjct: 65360 tttctcagccctatctccag 65341
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>ref|XM_539636.2| PREDICTED: Canis familiaris similar to Patched protein homolog 2
            (PTC2) (LOC482519), mRNA
          Length = 3381

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 291  agcgccgctgccaggcctgt 310
            ||||||||||||||||||||
Sbjct: 1075 agcgccgctgccaggcctgt 1056
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>gb|AC121969.3| Mus musculus BAC clone RP24-273J2 from chromosome 3, complete sequence
          Length = 145945

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 128    tagagaaaccaagcagcctc 147
              ||||||||||||||||||||
Sbjct: 123155 tagagaaaccaagcagcctc 123136
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>emb|AL365506.10| Human DNA sequence from clone RP11-640E12 on chromosome 10, complete
             sequence
          Length = 81831

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 75    ccttccatccgtaaggctac 94
             ||||||||||||||||||||
Sbjct: 64269 ccttccatccgtaaggctac 64288
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>emb|AL365495.14| Human DNA sequence from clone RP11-308K19 on chromosome 10 Contains
             part of the gene for a novel protein (FLJ10210), complete
             sequence
          Length = 185049

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 527   tcttgcatggctgtaatcat 546
             ||||||||||||||||||||
Sbjct: 98111 tcttgcatggctgtaatcat 98092
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>emb|AL022313.1|HS1119A7 Human DNA sequence from clone RP5-1119A7 on chromosome 22q12.2-12.3,
             complete sequence
          Length = 127145

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 605   aggaacatggctcttctctc 624
             ||||||||||||||||||||
Sbjct: 20348 aggaacatggctcttctctc 20367
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>emb|BX571774.9| Zebrafish DNA sequence from clone DKEY-250A19 in linkage group 9,
             complete sequence
          Length = 140812

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 232   tctgataaatctgttgcact 251
             ||||||||||||||||||||
Sbjct: 55339 tctgataaatctgttgcact 55320
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>emb|AL391737.2|CNS06C8G chromosome I of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 209982

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 533    atggctgtaatcattttgagcatt 556
              |||||||||| |||||||||||||
Sbjct: 142981 atggctgtaaacattttgagcatt 143004
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>emb|AJ851406.1| Gallus gallus mRNA for hypothetical protein, clone 1p14
          Length = 4728

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 644  gttggctttctcagccctat 663
            ||||||||||||||||||||
Sbjct: 2866 gttggctttctcagccctat 2847
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>gb|AC163649.3| Mus musculus BAC clone RP24-372B10 from chromosome 3, complete sequence
          Length = 154740

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    ctacaggaagaaatgatttt 110
             ||||||||||||||||||||
Sbjct: 44453 ctacaggaagaaatgatttt 44434
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>dbj|AK123361.1| Homo sapiens cDNA FLJ41367 fis, clone BRCAN2005436
          Length = 2039

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 605  aggaacatggctcttctctc 624
            ||||||||||||||||||||
Sbjct: 1038 aggaacatggctcttctctc 1019
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>gb|AC006922.7| Arabidopsis thaliana chromosome 2 clone T1J8 map g6825, complete
             sequence
          Length = 134151

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 331   gcagatcttcaaggaagttcatctgatg 358
             ||||||||||||| ||||||| ||||||
Sbjct: 21373 gcagatcttcaagcaagttcaactgatg 21346
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 515      caatggtactaatcttgcat 534
                ||||||||||||||||||||
Sbjct: 12781051 caatggtactaatcttgcat 12781032
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>gb|AC103895.3| Papio anubis clone RP41-397E13, complete sequence
          Length = 166686

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 445    tatacatgttcattgcagca 464
              ||||||||||||||||||||
Sbjct: 137711 tatacatgttcattgcagca 137730
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>dbj|AP005702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0027G10
          Length = 184759

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 515   caatggtactaatcttgcat 534
             ||||||||||||||||||||
Sbjct: 88828 caatggtactaatcttgcat 88809
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>dbj|AK073073.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033007M03, full
           insert sequence
          Length = 917

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 515 caatggtactaatcttgcat 534
           ||||||||||||||||||||
Sbjct: 758 caatggtactaatcttgcat 739
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>dbj|AK072517.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133J02, full
           insert sequence
          Length = 4013

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 515 caatggtactaatcttgcat 534
           ||||||||||||||||||||
Sbjct: 781 caatggtactaatcttgcat 762
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>gb|U32945.1|HSU32945 Human immature B cell Ig heavy chain mRNA, third
           complementarity-determining region, clone MBT-10,
           partial cds
          Length = 98

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 559 tgacaaaagcatcatgatgg 578
           ||||||||||||||||||||
Sbjct: 64  tgacaaaagcatcatgatgg 45
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>gb|AC124344.6| Mus musculus BAC clone RP24-448A7 from 3, complete sequence
          Length = 219818

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 91     ctacaggaagaaatgatttt 110
              ||||||||||||||||||||
Sbjct: 154868 ctacaggaagaaatgatttt 154849
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>gb|AC135237.6| Mus musculus BAC clone RP23-306F11 from chromosome 3, complete sequence
          Length = 199436

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   tagagaaaccaagcagcctc 147
             ||||||||||||||||||||
Sbjct: 99740 tagagaaaccaagcagcctc 99721


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,823,964
Number of Sequences: 3902068
Number of extensions: 6823964
Number of successful extensions: 132701
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 132492
Number of HSP's gapped (non-prelim): 198
length of query: 728
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 705
effective length of database: 17,143,297,704
effective search space: 12086024881320
effective search space used: 12086024881320
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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