ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal6o10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BCSA_SALTY (Q93IN2) Cellulose synthase catalytic subunit [UDP-fo... 30 7.9
2BCSA_SALTI (Q8Z291) Cellulose synthase catalytic subunit [UDP-fo... 30 7.9
3FKBP9_MOUSE (Q9Z247) FK506-binding protein 9 precursor (EC 5.2.1... 30 7.9

>BCSA_SALTY (Q93IN2) Cellulose synthase catalytic subunit [UDP-forming] (EC|
           2.4.1.12)
          Length = 874

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -2

Query: 528 IMTPGQEGLLENSRGYIRLGQSQGFLALKCFWTVQRW 418
           ++ P    L E  +GY R G S    AL C WT+  W
Sbjct: 9   LIPPVSARLSERYQGYRRHGASPFSAALGCLWTILAW 45



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>BCSA_SALTI (Q8Z291) Cellulose synthase catalytic subunit [UDP-forming] (EC|
           2.4.1.12)
          Length = 874

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -2

Query: 528 IMTPGQEGLLENSRGYIRLGQSQGFLALKCFWTVQRW 418
           ++ P    L E  +GY R G S    AL C WT+  W
Sbjct: 9   LIPPVSARLSERYQGYRRHGASPFSAALGCLWTILAW 45



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>FKBP9_MOUSE (Q9Z247) FK506-binding protein 9 precursor (EC 5.2.1.8)|
           (Peptidyl-prolyl cis-trans isomerase) (PPIase)
           (Rotamase) (FKBP65RS)
          Length = 570

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 20/59 (33%), Positives = 31/59 (52%)
 Frame = -1

Query: 214 VISPG*PLHMPVILASLWSLNPSIH*YTVV*ISPTSCTRGQLTVKLTGNFIQIYHVNIT 38
           VI P   LH  V+L  +W+    +H  T     P SC R   T++++ +F++ YH N T
Sbjct: 125 VIPPNSVLHFDVLLVDIWNSEDQVHIQTY--FKPPSCPR---TIQVS-DFVR-YHYNGT 176


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,467,566
Number of Sequences: 219361
Number of extensions: 1784820
Number of successful extensions: 3725
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3725
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 5972710590
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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