ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal19a12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|AL662993.3|OSJN00195 Oryza sativa genomic DNA, chromosome 4,... 84 8e-13
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 84 8e-13
3ref|XM_474977.1| Oryza sativa (japonica cultivar-group), predic... 52 0.003
4emb|AL606996.3|OSJN00123 Oryza sativa genomic DNA, chromosome 4,... 52 0.003
5dbj|AK120507.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.003
6ref|NM_196029.1| Oryza sativa (japonica cultivar-group) putative... 48 0.042
7gb|AC083945.3| Oryza sativa (japonica cultivar-group) chromosome... 48 0.042
8dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.042
9dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.042
10dbj|AP004070.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.042
11dbj|AP004857.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.042
12gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 48 0.042
13ref|XM_474969.1| Oryza sativa (japonica cultivar-group), predic... 46 0.16
14ref|XM_472794.1| Oryza sativa (japonica cultivar-group), predic... 46 0.16
15gb|AC109832.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.16
16dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.16
17dbj|AK107498.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.16
18dbj|AK065195.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.16
19gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.16
20emb|AL606653.3|OSJN00104 Oryza sativa genomic DNA, chromosome 4,... 46 0.16
21ref|XM_474975.1| Oryza sativa (japonica cultivar-group), predic... 44 0.65
22gb|AC009412.6| Homo sapiens BAC clone RP11-425P5 from 7, complet... 44 0.65
23emb|AL590408.15| Human DNA sequence from clone RP11-227F8 on chr... 44 0.65
24gb|AC140197.4| Mus musculus BAC clone RP23-253A22 from chromosom... 42 2.6
25gb|DQ158857.1| Bigelowiella natans nucleomorph chromosome 2, par... 42 2.6
26gb|AF530159.1| Nicotiana glutinosa tousled-like protein kinase (... 42 2.6
27gb|AC010063.7| Drosophila melanogaster 3L BAC RP98-16A3 (Roswell... 42 2.6
28gb|AC091222.3| Drosophila melanogaster 3L BAC RP98-11G24 (Roswel... 42 2.6
29gb|AC122129.9| Homo sapiens chromosome 17, clone RP1-253P7, comp... 42 2.6
30dbj|AP004085.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.6
31gb|DQ208194.1| Mayetiola destructor Mde8i18_1 gene, partial cds;... 42 2.6
32gb|AC149599.3| Mus musculus BAC clone RP23-193A3 from 18, comple... 42 2.6
33gb|AE003473.3| Drosophila melanogaster chromosome 3L, section 7 ... 42 2.6
34emb|AL354000.7|HS253P07 Homo from PAC RP1-253P07 and PAC RP1-28... 42 2.6

>emb|AL662993.3|OSJN00195 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015G09,
             complete sequence
          Length = 123375

 Score = 83.8 bits (42), Expect = 8e-13
 Identities = 74/84 (88%), Gaps = 3/84 (3%)
 Strand = Plus / Minus

                                                                         
Query: 657   gagaaaccttgctgacccaaaatcaccaacccttgcagtcatgtcatagtccaaaagaac 716
             ||||||| ||||||| |||||||||||||   |||| ||||| ||||||||||| |||||
Sbjct: 35365 gagaaactttgctgagccaaaatcaccaa---ttgcggtcatatcatagtccaatagaac 35309

                                     
Query: 717   attgcctggcttcaaatcgcagtg 740
             ||||| |||||||||||| |||||
Sbjct: 35308 attgcttggcttcaaatcacagtg 35285



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                      
Query: 294   cattcccggtcgatctttaggcgattccatggaacacaggagggcaacttcaaccaa 350
             |||||| ||||||||||| || ||||||||||| |||| |||| |||||||||||||
Sbjct: 51179 cattcctggtcgatctttcggtgattccatggagcacaagaggccaacttcaaccaa 51235



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                         
Query: 273   aattctggcacaaacttcccccattcccggtcgatctttaggcgattccatggaacacag 332
             |||| ||||||||||||||| |||||| || | ||| || || |||||| ||||||||||
Sbjct: 89306 aattttggcacaaacttccctcattcctggcctatcatttggtgattccttggaacacag 89247

                           
Query: 333   gagggcaacttcaa 346
              ||| ||| |||||
Sbjct: 89246 aaggccaatttcaa 89233



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                       
Query: 658   agaaaccttgctgacccaaaatcaccaacccttgcagtcatgtcatagtccaaaagaa 715
             |||||| | |||||||||||||||||||  | ||  ||||||||||| ||||||||||
Sbjct: 88830 agaaacttagctgacccaaaatcaccaatgcgtgaggtcatgtcataatccaaaagaa 88773



 Score = 48.1 bits (24), Expect = 0.042
 Identities = 111/140 (79%)
 Strand = Plus / Minus

                                                                         
Query: 453   gctaacaagcttgtgcaggctcaggccatcggtgaacatcgcatccgtcggtcgcctacg 512
             |||||||| |||||| ||||| | ||| ||| ||||||| ||||| ||||||| | | | 
Sbjct: 35638 gctaacaaacttgtgaaggctgatgccgtcgatgaacattgcatctgtcggtctcattcc 35579

                                                                         
Query: 513   ggtgagcatttccagaagcaagaccccgaaaccatagacatcacaccctgttgaaacttt 572
              ||||||||||| || || || || || ||||  || |||||||| || || || | |||
Sbjct: 35578 agtgagcatttcaagcagtaacactccaaaactgtacacatcacatccggtcgagatttt 35519

                                 
Query: 573   gtatcccatgcaatactctg 592
             ||||||||| | ||||||||
Sbjct: 35518 gtatcccattccatactctg 35499



 Score = 44.1 bits (22), Expect = 0.65
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 658   agaaaccttgctgacccaaaatcacc 683
             |||||| |||||||||||||||||||
Sbjct: 70776 agaaactttgctgacccaaaatcacc 70751



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 83.8 bits (42), Expect = 8e-13
 Identities = 74/84 (88%), Gaps = 3/84 (3%)
 Strand = Plus / Minus

                                                                           
Query: 657     gagaaaccttgctgacccaaaatcaccaacccttgcagtcatgtcatagtccaaaagaac 716
               ||||||| ||||||| |||||||||||||   |||| ||||| ||||||||||| |||||
Sbjct: 8421990 gagaaactttgctgagccaaaatcaccaa---ttgcggtcatatcatagtccaatagaac 8421934

                                       
Query: 717     attgcctggcttcaaatcgcagtg 740
               ||||| |||||||||||| |||||
Sbjct: 8421933 attgcttggcttcaaatcacagtg 8421910



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                        
Query: 294     cattcccggtcgatctttaggcgattccatggaacacaggagggcaacttcaaccaa 350
               |||||| ||||||||||| || ||||||||||| |||| |||| |||||||||||||
Sbjct: 8437804 cattcctggtcgatctttcggtgattccatggagcacaagaggccaacttcaaccaa 8437860



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                           
Query: 273     aattctggcacaaacttcccccattcccggtcgatctttaggcgattccatggaacacag 332
               |||| ||||||||||||||| |||||| || | ||| || || |||||| ||||||||||
Sbjct: 8475931 aattttggcacaaacttccctcattcctggcctatcatttggtgattccttggaacacag 8475872

                             
Query: 333     gagggcaacttcaa 346
                ||| ||| |||||
Sbjct: 8475871 aaggccaatttcaa 8475858



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                         
Query: 658     agaaaccttgctgacccaaaatcaccaacccttgcagtcatgtcatagtccaaaagaa 715
               |||||| | |||||||||||||||||||  | ||  ||||||||||| ||||||||||
Sbjct: 8475455 agaaacttagctgacccaaaatcaccaatgcgtgaggtcatgtcataatccaaaagaa 8475398



 Score = 48.1 bits (24), Expect = 0.042
 Identities = 111/140 (79%)
 Strand = Plus / Minus

                                                                           
Query: 453     gctaacaagcttgtgcaggctcaggccatcggtgaacatcgcatccgtcggtcgcctacg 512
               |||||||| |||||| ||||| | ||| ||| ||||||| ||||| ||||||| | | | 
Sbjct: 8422263 gctaacaaacttgtgaaggctgatgccgtcgatgaacattgcatctgtcggtctcattcc 8422204

                                                                           
Query: 513     ggtgagcatttccagaagcaagaccccgaaaccatagacatcacaccctgttgaaacttt 572
                ||||||||||| || || || || || ||||  || |||||||| || || || | |||
Sbjct: 8422203 agtgagcatttcaagcagtaacactccaaaactgtacacatcacatccggtcgagatttt 8422144

                                   
Query: 573     gtatcccatgcaatactctg 592
               ||||||||| | ||||||||
Sbjct: 8422143 gtatcccattccatactctg 8422124



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 585      atactctggagcgacgtatccaattgttcct 615
                |||||||||| |||||||||||| |||||||
Sbjct: 23269169 atactctggatcgacgtatccaaatgttcct 23269199



 Score = 44.1 bits (22), Expect = 0.65
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 658     agaaaccttgctgacccaaaatcacc 683
               |||||| |||||||||||||||||||
Sbjct: 8457401 agaaactttgctgacccaaaatcacc 8457376



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>ref|XM_474977.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2676

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                        
Query: 273  aattctggcacaaacttcccccattcccggtcgatctttaggcgattccatggaacacag 332
            |||| ||||||||||||||| |||||| || | ||| || || |||||| ||||||||||
Sbjct: 2640 aattttggcacaaacttccctcattcctggcctatcatttggtgattccttggaacacag 2581

                          
Query: 333  gagggcaacttcaa 346
             ||| ||| |||||
Sbjct: 2580 aaggccaatttcaa 2567



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                      
Query: 658  agaaaccttgctgacccaaaatcaccaacccttgcagtcatgtcatagtccaaaagaa 715
            |||||| | |||||||||||||||||||  | ||  ||||||||||| ||||||||||
Sbjct: 2258 agaaacttagctgacccaaaatcaccaatgcgtgaggtcatgtcataatccaaaagaa 2201



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>emb|AL606996.3|OSJN00123 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0071D01,
            complete sequence
          Length = 78794

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                        
Query: 273  aattctggcacaaacttcccccattcccggtcgatctttaggcgattccatggaacacag 332
            |||| ||||||||||||||| |||||| || | ||| || || |||||| ||||||||||
Sbjct: 8500 aattttggcacaaacttccctcattcctggcctatcatttggtgattccttggaacacag 8441

                          
Query: 333  gagggcaacttcaa 346
             ||| ||| |||||
Sbjct: 8440 aaggccaatttcaa 8427



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                      
Query: 658  agaaaccttgctgacccaaaatcaccaacccttgcagtcatgtcatagtccaaaagaa 715
            |||||| | |||||||||||||||||||  | ||  ||||||||||| ||||||||||
Sbjct: 8024 agaaacttagctgacccaaaatcaccaatgcgtgaggtcatgtcataatccaaaagaa 7967



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>dbj|AK120507.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123E09, full
            insert sequence
          Length = 4636

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                      
Query: 658  agaaaccttgctgacccaaaatcaccaacccttgcagtcatgtcatagtccaaaagaa 715
            |||||| | |||||||||||||||||||  | ||  ||||||||||| ||||||||||
Sbjct: 1995 agaaacttagctgacccaaaatcaccaatgcgtgaggtcatgtcataatccaaaagaa 2052



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                        
Query: 273  aattctggcacaaacttcccccattcccggtcgatctttaggcgattccatggaacacag 332
            |||| ||||||||||||||| |||||| || | ||| || || |||||| ||||||||||
Sbjct: 1519 aattttggcacaaacttccctcattcctggcctatcatttggtgattccttggaacacag 1578

                          
Query: 333  gagggcaacttcaa 346
             ||| ||| |||||
Sbjct: 1579 aaggccaatttcaa 1592



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>ref|NM_196029.1| Oryza sativa (japonica cultivar-group) putative protein kinase
           (OSJNBa0058E19.15), mRNA
          Length = 486

 Score = 48.1 bits (24), Expect = 0.042
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 709 aaaagaacattgcctggcttcaaatcgcagtg 740
           ||||| ||||||| ||||||||||||||||||
Sbjct: 347 aaaagtacattgcttggcttcaaatcgcagtg 316



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>gb|AC083945.3| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBa0058E19,
              complete sequence
          Length = 147706

 Score = 48.1 bits (24), Expect = 0.042
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 709    aaaagaacattgcctggcttcaaatcgcagtg 740
              ||||| ||||||| ||||||||||||||||||
Sbjct: 105211 aaaagtacattgcttggcttcaaatcgcagtg 105242



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 48.1 bits (24), Expect = 0.042
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                                
Query: 709      aaaagaacattgcctggcttcaaatcgcagtg 740
                ||||| ||||||| ||||||||||||||||||
Sbjct: 10575640 aaaagtacattgcttggcttcaaatcgcagtg 10575609



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 48.1 bits (24), Expect = 0.042
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                               
Query: 709     aaaagaacattgcctggcttcaaatcgcagtg 740
               ||||| ||||||| ||||||||||||||||||
Sbjct: 7434679 aaaagtacattgcttggcttcaaatcgcagtg 7434710



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 706     tccaaaagaacattgcctggcttca 730
               |||||||||||||||| ||||||||
Sbjct: 6246800 tccaaaagaacattgcttggcttca 6246824



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>dbj|AP004070.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1705_E12
          Length = 191416

 Score = 48.1 bits (24), Expect = 0.042
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 709   aaaagaacattgcctggcttcaaatcgcagtg 740
             ||||| ||||||| ||||||||||||||||||
Sbjct: 28385 aaaagtacattgcttggcttcaaatcgcagtg 28416



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>dbj|AP004857.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1711_D06
          Length = 87613

 Score = 48.1 bits (24), Expect = 0.042
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 709   aaaagaacattgcctggcttcaaatcgcagtg 740
             ||||| ||||||| ||||||||||||||||||
Sbjct: 77720 aaaagtacattgcttggcttcaaatcgcagtg 77751



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 48.1 bits (24), Expect = 0.042
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                                
Query: 709      aaaagaacattgcctggcttcaaatcgcagtg 740
                ||||| ||||||| ||||||||||||||||||
Sbjct: 10581679 aaaagtacattgcttggcttcaaatcgcagtg 10581648



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>ref|XM_474969.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1044

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 110/139 (79%)
 Strand = Plus / Minus

                                                                        
Query: 453  gctaacaagcttgtgcaggctcaggccatcggtgaacatcgcatccgtcggtcgcctacg 512
            |||||||| |||||| ||||| | ||| ||| ||||||| ||||| ||||||| | | | 
Sbjct: 1008 gctaacaaacttgtgaaggctgatgccgtcgatgaacattgcatctgtcggtctcattcc 949

                                                                        
Query: 513  ggtgagcatttccagaagcaagaccccgaaaccatagacatcacaccctgttgaaacttt 572
             ||||||||||| || || || || || ||||  || |||||||| || || || | |||
Sbjct: 948  agtgagcatttcaagcagtaacactccaaaactgtacacatcacatccggtcgagatttt 889

                               
Query: 573  gtatcccatgcaatactct 591
            ||||||||| | |||||||
Sbjct: 888  gtatcccattccatactct 870



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>ref|XM_472794.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1278

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 585 atactctggagcgacgtatccaattgttcct 615
           |||||||||| |||||||||||| |||||||
Sbjct: 912 atactctggatcgacgtatccaaatgttcct 882



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>gb|AC109832.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             P0038B07, complete sequence
          Length = 149697

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 706   tccaaaagaacattgcctggcttcaaatcgcagtg 740
             |||||||||||||||| ||| |||| |||||||||
Sbjct: 14932 tccaaaagaacattgcttggtttcagatcgcagtg 14966



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 706      tccaaaagaacattgcctggcttcaaatcgcagtg 740
                |||||||||||||||| ||| |||| |||||||||
Sbjct: 23680540 tccaaaagaacattgcttggtttcagatcgcagtg 23680574



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>dbj|AK107498.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-D10, full
            insert sequence
          Length = 1668

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 585  atactctggagcgacgtatccaattgttcct 615
            |||||||||| |||||||||||| |||||||
Sbjct: 1106 atactctggatcgacgtatccaaatgttcct 1136



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>dbj|AK065195.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002E14, full
            insert sequence
          Length = 3768

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 706  tccaaaagaacattgcctggcttcaaatcgcagtg 740
            |||||||||||||||| ||| |||| |||||||||
Sbjct: 2877 tccaaaagaacattgcttggtttcagatcgcagtg 2843



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 706      tccaaaagaacattgcctggcttcaaatcgcagtg 740
                |||||||||||||||| ||| |||| |||||||||
Sbjct: 23990563 tccaaaagaacattgcttggtttcagatcgcagtg 23990597



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>emb|AL606653.3|OSJN00104 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0048E02,
              complete sequence
          Length = 121337

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 585    atactctggagcgacgtatccaattgttcct 615
              |||||||||| |||||||||||| |||||||
Sbjct: 107322 atactctggatcgacgtatccaaatgttcct 107352



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>ref|XM_474975.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2616

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 658  agaaaccttgctgacccaaaatcacc 683
            |||||| |||||||||||||||||||
Sbjct: 2183 agaaactttgctgacccaaaatcacc 2158



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>gb|AC009412.6| Homo sapiens BAC clone RP11-425P5 from 7, complete sequence
          Length = 212827

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 6     ttctagaaatatactctagata 27
             ||||||||||||||||||||||
Sbjct: 35566 ttctagaaatatactctagata 35587



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>emb|AL590408.15| Human DNA sequence from clone RP11-227F8 on chromosome 1 Contains the
             5' end of a novel gene (DKFZP586L151), a novel gene, the
             5' end of the gene for C-terminal PDZ domain ligand of
             neuronal nitric oxide synthase (CAPON) and two CpG
             islands, complete sequence
          Length = 103523

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 123   tagagttctgatgcttttcaaa 144
             ||||||||||||||||||||||
Sbjct: 83226 tagagttctgatgcttttcaaa 83205



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>gb|AC140197.4| Mus musculus BAC clone RP23-253A22 from chromosome 18, complete
             sequence
          Length = 192563

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 144   atattaataactagaggtctg 164
             |||||||||||||||||||||
Sbjct: 65631 atattaataactagaggtctg 65651



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>gb|DQ158857.1| Bigelowiella natans nucleomorph chromosome 2, partial sequence
          Length = 134144

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 132    gatgcttttcaaatattaata 152
              |||||||||||||||||||||
Sbjct: 119760 gatgcttttcaaatattaata 119780



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>gb|AF530159.1| Nicotiana glutinosa tousled-like protein kinase (TLK1) mRNA,
           partial cds
          Length = 931

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 714 aacattgcctggcttcaaatc 734
           |||||||||||||||||||||
Sbjct: 306 aacattgcctggcttcaaatc 286



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>gb|AC010063.7| Drosophila melanogaster 3L BAC RP98-16A3 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 194006

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 138   tttcaaatattaataactaga 158
             |||||||||||||||||||||
Sbjct: 45258 tttcaaatattaataactaga 45278



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>gb|AC091222.3| Drosophila melanogaster 3L BAC RP98-11G24 (Roswell Park Cancer
            Institute Drosophila BAC Library) complete sequence
          Length = 144056

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 138  tttcaaatattaataactaga 158
            |||||||||||||||||||||
Sbjct: 4674 tttcaaatattaataactaga 4654



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>gb|AC122129.9| Homo sapiens chromosome 17, clone RP1-253P7, complete sequence
          Length = 159868

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 634   tctggagtaccaggaactgaa 654
             |||||||||||||||||||||
Sbjct: 12459 tctggagtaccaggaactgaa 12439



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>dbj|AP004085.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1267_F10
          Length = 162669

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 706   tccaaaagaacattgcctggcttca 730
             |||||||||||||||| ||||||||
Sbjct: 44187 tccaaaagaacattgcttggcttca 44211



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>gb|DQ208194.1| Mayetiola destructor Mde8i18_1 gene, partial cds; Mde8i18_2,
            Mde8i18_3, Mde8i18_4, and Mde8i18_5 genes, complete cds;
            and Mde8i18_6 gene, partial cds
          Length = 42642

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 722  ctggcttcaaatcgcagtgga 742
            |||||||||||||||||||||
Sbjct: 4003 ctggcttcaaatcgcagtgga 3983



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>gb|AC149599.3| Mus musculus BAC clone RP23-193A3 from 18, complete sequence
          Length = 208349

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 144  atattaataactagaggtctg 164
            |||||||||||||||||||||
Sbjct: 1852 atattaataactagaggtctg 1872



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>gb|AE003473.3| Drosophila melanogaster chromosome 3L, section 7 of 83 of the complete
              sequence
          Length = 315108

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 138    tttcaaatattaataactaga 158
              |||||||||||||||||||||
Sbjct: 186637 tttcaaatattaataactaga 186617



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>emb|AL354000.7|HS253P07 Homo from PAC RP1-253P07 and  PAC RP1-281I13 (complete covert by PAC
              RP1-253P07), complete sequence
          Length = 159876

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 634    tctggagtaccaggaactgaa 654
              |||||||||||||||||||||
Sbjct: 147417 tctggagtaccaggaactgaa 147437


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,808,590
Number of Sequences: 3902068
Number of extensions: 6808590
Number of successful extensions: 129225
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 128748
Number of HSP's gapped (non-prelim): 471
length of query: 742
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 719
effective length of database: 17,143,297,704
effective search space: 12326031049176
effective search space used: 12326031049176
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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