ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal19a07 |
|---|---|
| Clone Library Name | barley_pub |
>CIPK1_ORYSA (Q6X4A2) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1)| Length = 449 Score = 76.3 bits (186), Expect = 5e-14 Identities = 42/126 (33%), Positives = 71/126 (56%), Gaps = 3/126 (2%) Frame = -3 Query: 441 EKMHIAAAXTTEPRIRRIKSMNAFDIIASSPSFDLSGLFEERGE---QLRFVSSAPVNTI 271 E H+ +P SMNAF++I+ + + +L LFE + E + RF S P I Sbjct: 303 EDRHVKEETEDQPT-----SMNAFELISLNQALNLDNLFEAKKEYKRETRFTSQCPPKEI 357 Query: 270 ISKLEEIAGQVSFTARTKDCQVSFXATRNGHKGALAISTKIFQLTPELVMVQVCKKAGDT 91 I+K+EE A + F + K+ ++ + G KG L ++T++FQ+ P L +V++ K GDT Sbjct: 358 ITKIEEAAKPLGFDIQKKNYKMRMENLKAGRKGNLNVATEVFQVAPSLHVVELKKAKGDT 417 Query: 90 AEYRQF 73 E+++F Sbjct: 418 LEFQKF 423
>CPK15_ARATH (P92937) CBL-interacting serine/threonine-protein kinase 15 (EC| 2.7.11.1) (Serine/threonine-protein kinase ATPK10) (SOS2-like protein kinase PKS3) (SOS-interacting protein 2) (SNF1-related kinase 3.1) Length = 421 Score = 72.0 bits (175), Expect = 1e-12 Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 2/125 (1%) Frame = -3 Query: 414 TTEPRIRRIKSMNAFDIIASSPSFDLSGLFE--ERGEQLRFVSSAPVNTIISKLEEIAGQ 241 + E +R ++NAF+II+ S FDLSGLFE E E++RF S+ + I KL EI Sbjct: 293 SAEKEKKRCINLNAFEIISLSTGFDLSGLFEKGEEKEEMRFTSNREASEITEKLVEIGKD 352 Query: 240 VSFTARTKDCQVSFXATRNGHKGALAISTKIFQLTPELVMVQVCKKAGDTAEYRQFCGSE 61 + R K+ + + A + ++F++ P MV + K GDTAEY++ Sbjct: 353 LKMKVRKKEHEWRVKMSAE----ATVVEAEVFEIAPSYHMVVLKKSGGDTAEYKRVMKES 408 Query: 60 LKPGL 46 ++P L Sbjct: 409 IRPAL 413
>CPK24_ARATH (Q9LDI3) CBL-interacting serine/threonine-protein kinase 24 (EC| 2.7.11.1) (SNF1-related kinase 3.11) (SALT OVERLY SENSITIVE 2 protein) Length = 446 Score = 70.1 bits (170), Expect = 4e-12 Identities = 43/127 (33%), Positives = 69/127 (54%), Gaps = 7/127 (5%) Frame = -3 Query: 381 MNAFDIIASSPSFDLSGLFEERGE----QLRFVSSAPVNTIISKLEEIAGQVSFTARTKD 214 MNAF++I S +LS LF+ R + Q RFVS + II+ +E +A + F + T++ Sbjct: 310 MNAFEMITLSQGLNLSALFDRRQDFVKRQTRFVSRREPSEIIANIEAVANSMGFKSHTRN 369 Query: 213 CQVSFXATRNGHKGALAISTKIFQLTPELVMVQVCKKAGDTAEYRQF---CGSELKPGLR 43 + + G LA+ +I+++ P L MV V K AG+T EY +F S+L+ + Sbjct: 370 FKTRLEGLSSIKAGQLAVVIEIYEVAPSLFMVDVRKAAGETLEYHKFYKKLCSKLENIIW 429 Query: 42 GLVEGLP 22 EG+P Sbjct: 430 RATEGIP 436
>CIPK1_ARATH (Q8RWC9) CBL-interacting serine/threonine-protein kinase 1 (EC| 2.7.11.1) (SOS2-like protein kinase PKS13) (SNF1-related kinase 3.16) Length = 444 Score = 61.2 bits (147), Expect = 2e-09 Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 5/114 (4%) Frame = -3 Query: 381 MNAFDIIASSPSFDLSGLFEERG---EQLRFVSSAPVNTIISKLEEIAGQVSFTARTKDC 211 +NAF +I S DLSG FE+ ++RF S++ ++ K+E ++ F+ + K Sbjct: 318 INAFQLIGMSSFLDLSGFFEQENVSERRIRFTSNSSAKDLLEKIETAVTEMGFSVQKKHA 377 Query: 210 QVSFXATRNGHKG--ALAISTKIFQLTPELVMVQVCKKAGDTAEYRQFCGSELK 55 ++ KG L+++ ++F++ P L +V++ K GD+ YRQ LK Sbjct: 378 KLRVKQEERNQKGQVGLSVTAEVFEIKPSLNVVELRKSYGDSCLYRQLYERLLK 431
>CPK11_ARATH (O22932) CBL-interacting serine/threonine-protein kinase 11 (EC| 2.7.11.1) (SOS2-like protein kinase PKS5) (SOS-interacting protein 4) (SNF1-related kinase 3.22) Length = 435 Score = 54.3 bits (129), Expect = 2e-07 Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 4/122 (3%) Frame = -3 Query: 408 EPRIRRIKSMNAFDIIASSPSFDLSGLF----EERGEQLRFVSSAPVNTIISKLEEIAGQ 241 E + +KS+NAFD+I+ S DLSGLF GE RF+S + ++E A + Sbjct: 298 ESSLEAVKSLNAFDLISYSSGLDLSGLFAGCSNSSGESERFLSEKSPEMLAEEVEGFARE 357 Query: 240 VSFTARTKDCQVSFXATRNGHKGALAISTKIFQLTPELVMVQVCKKAGDTAEYRQFCGSE 61 + + K + + G G I I +L LV+V+ ++ GD Y++ + Sbjct: 358 ENLRMKKKK-EEEYGFEMEGQNGKFGIGICISRLNDLLVVVEARRRGGDGDCYKEMWNGK 416 Query: 60 LK 55 L+ Sbjct: 417 LR 418
>PPCK_CHLLI (Q08262) Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) (PEP| carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK) Length = 618 Score = 35.0 bits (79), Expect = 0.14 Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 25/118 (21%) Frame = +1 Query: 142 LEYLGGYGQRSLVPISCRLEAHLAILGARREANLPRDLLQLGDDGVHRRAGHETQLLAA- 318 + Y GY +L+ C +A AR E L +L LG V AG + + AA Sbjct: 212 VSYSSGYNGNTLLGKKC-FALRIASSMARDEGWLAEHMLILG---VESPAGEKDYVAAAF 267 Query: 319 ----------LLKQPGQIEAWR---GGDDVE--------RVHALDPSYAWLG---GTS 420 ++ PG++E W+ GDD+ R+HA++P Y + G GTS Sbjct: 268 PSACGKTNFAMIIPPGEMEGWKITTVGDDIRLDQQGKDGRLHAINPEYGFFGVAPGTS 325
>RPOB_DEHSC (Q3ZX01) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1273 Score = 33.1 bits (74), Expect = 0.52 Identities = 19/52 (36%), Positives = 28/52 (53%) Frame = +1 Query: 82 VFSSVSGFLAYLDHDELRRELEYLGGYGQRSLVPISCRLEAHLAILGARREA 237 +FS + + +L+HD+ R L +G QR VP+ R EA + G REA Sbjct: 595 IFSVAASLIPFLEHDDANRAL--MGANMQRQAVPL-LRAEAPMVATGMEREA 643
>RPOB_DEHE1 (Q3Z8V4) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1272 Score = 33.1 bits (74), Expect = 0.52 Identities = 19/52 (36%), Positives = 28/52 (53%) Frame = +1 Query: 82 VFSSVSGFLAYLDHDELRRELEYLGGYGQRSLVPISCRLEAHLAILGARREA 237 +FS + + +L+HD+ R L +G QR VP+ R EA + G REA Sbjct: 595 IFSVAASLIPFLEHDDANRAL--MGANMQRQAVPL-LRAEAPMVATGMEREA 643
>Y047_MYCBO (P59967) Hypothetical protein Mb0047c| Length = 367 Score = 32.7 bits (73), Expect = 0.68 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Frame = -3 Query: 399 IRRIKSMNAFDIIASSPSFDLS-GLFEERGEQLRFVSSAPVNTIISKLEEIAGQVSFTAR 223 +R +K + AFD+ A FDLS +F ++ AP N I+ + + G + A Sbjct: 59 VRDVKFVAAFDVDAKKVGFDLSDAIFASENNTIKIADVAPTNVIVQRGPTLDGIGKYYAD 118 Query: 222 T 220 T Sbjct: 119 T 119
>Y046_MYCTU (P71703) Hypothetical protein Rv0046c/MT0052| Length = 367 Score = 32.7 bits (73), Expect = 0.68 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Frame = -3 Query: 399 IRRIKSMNAFDIIASSPSFDLS-GLFEERGEQLRFVSSAPVNTIISKLEEIAGQVSFTAR 223 +R +K + AFD+ A FDLS +F ++ AP N I+ + + G + A Sbjct: 59 VRDVKFVAAFDVDAKKVGFDLSDAIFASENNTIKIADVAPTNVIVQRGPTLDGIGKYYAD 118 Query: 222 T 220 T Sbjct: 119 T 119
>IPF1_RAT (P52947) Insulin promoter factor 1 (IPF-1) (Islet/duodenum homeobox| 1) (IDX-1) (Somatostatin-transactivating factor 1) (STF-1) Length = 283 Score = 30.4 bits (67), Expect = 3.4 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 12/66 (18%) Frame = -2 Query: 172 SAGHIHQDIPAHAGARHGP-----------GMQE-SRRHC*IPAILRQ*AQAWSSRSRGG 29 + H+H +PA G H P G++E SR H P + A AW S+ GG Sbjct: 78 AGAHLHHHLPAQLGLAHPPPGPFPNGTETGGLEEPSRVHLPFPWMKSTKAHAWKSQWAGG 137 Query: 28 PAXGWP 11 P Sbjct: 138 AYAAEP 143
>SYN_UREPA (Q9PQC6) Asparaginyl-tRNA synthetase (EC 6.1.1.22)| (Asparagine--tRNA ligase) (AsnRS) Length = 454 Score = 29.6 bits (65), Expect = 5.8 Identities = 18/87 (20%), Positives = 37/87 (42%), Gaps = 1/87 (1%) Frame = -3 Query: 432 HIAAAXTTEPRIRRIKSMNAFDIIASSPSFDLSGLFEERGEQLRFVSSAPVNTIISKLEE 253 H+A EP + + DI+ + + E+ ++L F++ +I KL++ Sbjct: 227 HLAEFWMIEPEMAFVDLKGMQDIVEDLVKHVIKAVLEKNQQELEFLAQRNDENLIKKLQK 286 Query: 252 IAGQVSFTARTKDC-QVSFXATRNGHK 175 + KD ++ A +NGH+ Sbjct: 287 VVESKFERIEYKDAVKILADAVKNGHQ 313
>LATA_LATMA (P23631) Alpha-latrotoxin precursor (Alpha-LTX)| Length = 1401 Score = 29.6 bits (65), Expect = 5.8 Identities = 14/57 (24%), Positives = 28/57 (49%) Frame = +1 Query: 10 KAILRQALHETSKTRLELTAAELPVFSSVSGFLAYLDHDELRRELEYLGGYGQRSLV 180 K +++ + T + + TA ++ + + S + YL + EY YG+RSL+ Sbjct: 1155 KLLIKYGIDVTIRNAYDKTALDIAIDAKFSNIVEYLKTKSGKFRREYKSSYGERSLL 1211
>DYIN_DROME (Q24246) Dynein intermediate chain, cytosolic (DH IC) (Cytoplasmic| dynein intermediate chain) (Protein short wing) Length = 663 Score = 29.6 bits (65), Expect = 5.8 Identities = 15/47 (31%), Positives = 22/47 (46%) Frame = -3 Query: 312 EQLRFVSSAPVNTIISKLEEIAGQVSFTARTKDCQVSFXATRNGHKG 172 E L + APV+ ++S L + S + T+ S AT NG G Sbjct: 56 EMLSSLGVAPVSEVLSSLSSVNSMTSDNSNTQTPDASLQATVNGQSG 102
>L_SENDO (O55528) Large structural protein (Protein L) (Transcriptase)| (Replicase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)] Length = 2228 Score = 29.6 bits (65), Expect = 5.8 Identities = 43/149 (28%), Positives = 55/149 (36%), Gaps = 22/149 (14%) Frame = -3 Query: 390 IKSMNAFDIIASSPSFDLSGLF-EERGEQ----LRFVSSAPV-----------NTIISKL 259 IK++ A ++ SP+ LSGLF E GE+ F+ V N++ Sbjct: 1013 IKNITARSVLQESPNPLLSGLFTETSGEEDLNLASFLMDRKVILPRVAHEILSNSLTGVR 1072 Query: 258 EEIAGQVSFTARTKDCQVSFXATRNG-HKGALAISTKIFQLTPELVMVQVCKKAGDTAEY 82 E IAG + T V R G G L L E + + K D EY Sbjct: 1073 EAIAGMLD----TTKSLVRASVKRGGLSYGILRRLVNYDLLQYETLTRTLRKPVKDNIEY 1128 Query: 81 RQFCGSELKPGLR-----GLVEGLPXDGL 10 C EL GLR L G P GL Sbjct: 1129 EYMCSVELAVGLRQKMWIHLTYGRPIHGL 1157
>L_SENDA (Q9DUD8) Large structural protein (Protein L) (Transcriptase)| (Replicase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)] Length = 2228 Score = 29.6 bits (65), Expect = 5.8 Identities = 43/149 (28%), Positives = 55/149 (36%), Gaps = 22/149 (14%) Frame = -3 Query: 390 IKSMNAFDIIASSPSFDLSGLF-EERGEQ----LRFVSSAPV-----------NTIISKL 259 IK++ A ++ SP+ LSGLF E GE+ F+ V N++ Sbjct: 1013 IKNITARSVLQESPNPLLSGLFTETSGEEDLNLASFLMDRKVILPRVAHEILGNSLTGVR 1072 Query: 258 EEIAGQVSFTARTKDCQVSFXATRNG-HKGALAISTKIFQLTPELVMVQVCKKAGDTAEY 82 E IAG + T V R G G L L E + + K D EY Sbjct: 1073 EAIAGMLD----TTKSLVRASVKRGGLSYGILRRLVNYDLLQYETLTRTLRKPVKDNIEY 1128 Query: 81 RQFCGSELKPGLR-----GLVEGLPXDGL 10 C EL GLR L G P GL Sbjct: 1129 EYMCSVELAVGLRQKMWIHLTYGRPIHGL 1157
>ISPH_STRCO (Q9FBM1) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC| 1.17.1.2) Length = 338 Score = 29.6 bits (65), Expect = 5.8 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 1/69 (1%) Frame = +1 Query: 223 ARREANLPRDLLQLGDDGVHRRAGHETQLLAALLKQPGQIEAWRGGDDVERVHALDPS-Y 399 A R AN D+L +G +G HE +++ + P I+ G +DV +V DPS Sbjct: 115 AVRFANDDYDILLIGHEG------HE-EVIGTSGEAPDHIQLVDGPEDVAKVEVRDPSKV 167 Query: 400 AWLGGTSCS 426 WL T+ S Sbjct: 168 VWLSQTTLS 176
>COAE_DEIRA (Q9RT73) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A| kinase) Length = 207 Score = 29.6 bits (65), Expect = 5.8 Identities = 22/59 (37%), Positives = 26/59 (44%) Frame = +1 Query: 181 PISCRLEAHLAILGARREANLPRDLLQLGDDGVHRRAGHETQLLAALLKQPGQIEAWRG 357 P+ RLE LA G RE L RD QL + RRA +L G +EA G Sbjct: 144 PLELRLERALARGGLTREDILARDARQLSSEEKRRRA-------TIVLDNSGPLEALEG 195
>3MG_ARATH (Q39147) DNA-3-methyladenine glycosylase (EC 3.2.2.21)| (3-methyladenine DNA glycosidase) Length = 254 Score = 29.3 bits (64), Expect = 7.6 Identities = 31/112 (27%), Positives = 45/112 (40%), Gaps = 3/112 (2%) Frame = +1 Query: 52 RLELTAAELPVFSSVSGFLAYLDHDELRRELEYLG---GYGQRSLVPISCRLEAHLAILG 222 R +T PVF YL + L L + G G L+ SC + + + Sbjct: 105 RFGVTPRTAPVFGPGGHAYVYLCYG-LHMMLNIVADKEGVGAAVLIR-SCSPVSGMETIQ 162 Query: 223 ARREANLPRDLLQLGDDGVHRRAGHETQLLAALLKQPGQIEAWRGGDDVERV 378 RR + +L G V + G T+ L PG +E GG+DVE+V Sbjct: 163 ERRGLKTDKPVLLNGPGKVGQALGLSTEWSHHPLYSPGGLELLDGGEDVEKV 214
>RIR4_ECOLI (P37146) Ribonucleoside-diphosphate reductase 2 beta subunit (EC| 1.17.4.1) (Ribonucleotide reductase 2) (R2F protein) Length = 319 Score = 29.3 bits (64), Expect = 7.6 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Frame = +2 Query: 239 TCPAISSSLEMMVFTGA--LDTKRNCSPRSSNSPDRSKLGEEAMMSN 373 T + L M VFTG LDT +N S PD EEA++SN Sbjct: 47 TLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSN 93
>MYH7_RAT (P02564) Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)| Length = 1935 Score = 28.9 bits (63), Expect = 9.9 Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%) Frame = +1 Query: 25 QALHETSKTRLELTAAELPVFSSVSGFLAYLDHDE---LRRELEY 150 +++HE K R +L A +L + S++ A L+H+E LR +LE+ Sbjct: 1521 KSIHELEKIRKQLEAEKLELQSALEEAEASLEHEEGKILRAQLEF 1565
>MYH7_PIG (P79293) Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)| Length = 1935 Score = 28.9 bits (63), Expect = 9.9 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 3/45 (6%) Frame = +1 Query: 25 QALHETSKTRLELTAAELPVFSSVSGFLAYLDHDE---LRRELEY 150 + +HE K R +L A +L + S++ A L+H+E LR +LE+ Sbjct: 1521 KTIHELEKVRKQLEAEKLELQSALEESEASLEHEEGKILRAQLEF 1565
>L_SENDZ (P06447) Large structural protein (Protein L) (Transcriptase)| (Replicase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)] Length = 2228 Score = 28.9 bits (63), Expect = 9.9 Identities = 43/150 (28%), Positives = 55/150 (36%), Gaps = 23/150 (15%) Frame = -3 Query: 390 IKSMNAFDIIASSPSFDLSGLF-EERGEQ----LRFVSSAPV-----------NTIISKL 259 IK++ A ++ SP+ LSGLF E GE+ F+ V N++ Sbjct: 1013 IKNITARSVLQESPNPLLSGLFTETSGEEDLNLASFLMDRKVILPRVAHEILGNSLTGVR 1072 Query: 258 EEIAGQVSFTARTKDCQVSFXATRNG--HKGALAISTKIFQLTPELVMVQVCKKAGDTAE 85 E IAG + T V R G G L L E + + K D E Sbjct: 1073 EAIAGMLDTTKSLVRASV-----RKGGLSYGILRRLVNYDLLQYETLTRTLRKPVKDNIE 1127 Query: 84 YRQFCGSELKPGLR-----GLVEGLPXDGL 10 Y C EL GLR L G P GL Sbjct: 1128 YEYMCSVELAVGLRQKMWIHLTYGRPIHGL 1157
>L_SENDF (Q06996) Large structural protein (Protein L) (Transcriptase)| (Replicase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)] Length = 2228 Score = 28.9 bits (63), Expect = 9.9 Identities = 43/150 (28%), Positives = 55/150 (36%), Gaps = 23/150 (15%) Frame = -3 Query: 390 IKSMNAFDIIASSPSFDLSGLF-EERGEQ----LRFVSSAPV-----------NTIISKL 259 IK++ A ++ SP+ LSGLF E GE+ F+ V N++ Sbjct: 1013 IKNITARSVLQESPNPLLSGLFTETSGEEDLNLASFLMDRKVILPRVAHEILGNSLTGVR 1072 Query: 258 EEIAGQVSFTARTKDCQVSFXATRNG--HKGALAISTKIFQLTPELVMVQVCKKAGDTAE 85 E IAG + T V R G G L L E + + K D E Sbjct: 1073 EAIAGMLDTTKSLVRASV-----RKGGLSYGILRRLVNYDLLQYETLTRTLRKPVKDNIE 1127 Query: 84 YRQFCGSELKPGLR-----GLVEGLPXDGL 10 Y C EL GLR L G P GL Sbjct: 1128 YEYMCSVELAVGLRQKMWIHLTYGRPIHGL 1157
>L_SENDE (P06829) Large structural protein (Protein L) (Transcriptase)| (Replicase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)] Length = 2228 Score = 28.9 bits (63), Expect = 9.9 Identities = 43/150 (28%), Positives = 55/150 (36%), Gaps = 23/150 (15%) Frame = -3 Query: 390 IKSMNAFDIIASSPSFDLSGLF-EERGEQ----LRFVSSAPV-----------NTIISKL 259 IK++ A ++ SP+ LSGLF E GE+ F+ V N++ Sbjct: 1013 IKNITARSVLQESPNPLLSGLFTETSGEEDLNLASFLMDRKVILPRVAHEILGNSLTGVR 1072 Query: 258 EEIAGQVSFTARTKDCQVSFXATRNG--HKGALAISTKIFQLTPELVMVQVCKKAGDTAE 85 E IAG + T V R G G L L E + + K D E Sbjct: 1073 EAIAGMLDTTKSLVRASV-----RKGGLSYGILRRLVNYDLLQYETLTRTLRKPVKDNIE 1127 Query: 84 YRQFCGSELKPGLR-----GLVEGLPXDGL 10 Y C EL GLR L G P GL Sbjct: 1128 YEYMCSVELAVGLRQKMWIHLTYGRPIHGL 1157 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,751,315 Number of Sequences: 219361 Number of extensions: 1260155 Number of successful extensions: 5029 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 4888 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5013 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4373119116 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
