ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal7d08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_195864.1| Oryza sativa (japonica cultivar-group) unknown ... 96 2e-16
2gb|AC119148.2| Oryza sativa (japonica cultivar-group) chromosome... 96 2e-16
3tpg|BK000084.1| TPA: TPA_exp: Oryza sativa cellulose synthase-li... 96 2e-16
4dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-16
5gb|AF435646.1| Oryza sativa CSLH1 mRNA, partial cds 96 2e-16
6dbj|AK121003.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 2e-16
7dbj|AK069071.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 2e-16
8dbj|AK061162.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 2e-16
9dbj|AK060286.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 2e-16
10gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 96 2e-16
11ref|NM_185228.2| Oryza sativa (japonica cultivar-group), predic... 90 1e-14
12emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clon... 90 1e-14
13dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 90 1e-14
14ref|XM_472496.1| Oryza sativa (japonica cultivar-group), predic... 74 6e-10
15tpg|BK000085.1| TPA: TPA_exp: Oryza sativa (indica cultivar-grou... 74 6e-10
16gb|AC154739.2| Mus musculus BAC clone RP23-117B4 from 9, complet... 48 0.037
17gb|AC136735.7| Mus musculus chromosome 3, clone RP23-175G2, comp... 46 0.14
18ref|XM_479649.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.57
19ref|XM_507416.1| PREDICTED Oryza sativa (japonica cultivar-group... 44 0.57
20ref|XM_506615.2| PREDICTED Oryza sativa (japonica cultivar-group... 44 0.57
21gb|AF484556.1| Streptomyces atroolivaceus leinamycin biosyntheti... 44 0.57
22emb|CR691646.2|CNS0FWMI Tetraodon nigroviridis full-length cDNA 44 0.57
23emb|CR684390.2|CNS0FR0Y Tetraodon nigroviridis full-length cDNA 44 0.57
24emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete ... 44 0.57
25dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.57
26dbj|AP004654.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.57
27dbj|AP005406.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.57
28dbj|AK104211.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.57
29dbj|AK070102.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.57
30dbj|AK061172.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.57
31gb|AC117803.12| Mus musculus chromosome 17, clone RP24-562I11, c... 42 2.3
32ref|XM_461620.1| Debaryomyces hansenii CBS767 hypothetical prote... 42 2.3
33gb|AC055772.16| Mus musculus chromosome 12, clone RP23-291K4, co... 42 2.3
34emb|AL049557.19|HSJ773A18 Human DNA sequence from clone RP4-773A... 42 2.3
35emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS... 42 2.3
36gb|AE011857.1| Xanthomonas axonopodis pv. citri str. 306, secti... 42 2.3
37dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
38dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
39dbj|AK072914.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.3
40gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.3
41gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.3
42emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa... 42 2.3
43emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa... 42 2.3
44emb|CT010483.12| Mouse DNA sequence from clone RP23-281L8 on chr... 42 2.3
45gb|AF007560.1|AF007560 Mus musculus presenilin-1 gene, alternati... 42 2.3
46ref|XM_511908.1| PREDICTED: Pan troglodytes similar to Heat shoc... 40 8.9
47ref|XM_480199.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.9
48gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 8.9
49gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.9
50emb|AJ315970.1|PFL315970 Platichthys flesus microsatellite DNA, ... 40 8.9
51emb|BX927114.16| Zebrafish DNA sequence from clone DKEY-1C7 in l... 40 8.9
52gb|AC130202.1| Mus musculus BAC clone RP24-480M3 from 9, complet... 40 8.9
53gb|AC159272.2| Mus musculus BAC clone RP23-423J20 from chromosom... 40 8.9
54gb|CP000318.1| Polaromonas sp. JS666 plasmid 2, complete sequence 40 8.9
55gb|AC105631.4| Rattus norvegicus 1 BAC CH230-132J4 (Children's H... 40 8.9
56emb|Z93338.1|ASZ93338 A.simplex ksdI genes and three open readin... 40 8.9
57gb|AC122371.4| Mus musculus BAC clone RP23-459C10 from chromosom... 40 8.9
58gb|AC159886.2| Mus musculus BAC clone RP24-397P9 from chromosome... 40 8.9
59gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 8.9
60dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 8.9
61emb|BX088698.22| Mouse DNA sequence from clone RP23-309D15 on ch... 40 8.9
62gb|AC084732.1|AC084732 Homo sapiens BAC clone RP11-368G2 from 4,... 40 8.9
63dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
64dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
65gb|AC097484.3| Homo sapiens BAC clone RP11-147K6 from 4, complet... 40 8.9
66gb|AC079889.20| Oryza sativa chromosome 3 BAC OSJNBa0092M19 geno... 40 8.9
67gb|AC159270.2| Mus musculus BAC clone RP23-450E17 from chromosom... 40 8.9
68gb|AC008747.5|AC008747 Homo sapiens chromosome 19 clone CTD-2588... 40 8.9
69dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 8.9
70dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 8.9
71dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
72dbj|AP005559.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
73dbj|AP004698.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
74dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
75dbj|AP005157.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
76dbj|AK109080.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.9
77gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete... 40 8.9 
>ref|NM_195864.1| Oryza sativa (japonica cultivar-group) unknown protein
            (OSJNBa0035F15.9), mRNA
          Length = 2742

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 99/116 (85%)
 Strand = Plus / Minus

                                                                        
Query: 499  ttgcgggtgacctcgaacacggtctcagagagccctagtgtcttgaggatcacggtgagg 558
            |||||||||||||||||||| ||||| ||||  ||||  ||||||||||| ||||| || 
Sbjct: 1913 ttgcgggtgacctcgaacacagtctcggagaagcctaaggtcttgaggatgacggtaaga 1854

                                                                    
Query: 559  aaggcgaggagccaggcggaggccgaggtgatgcgttgcatcctgtggttgttcca 614
            || || || ||||| || || || |||||||| |||||||||||||||||||||||
Sbjct: 1853 aatgccagtagccaagcagaagctgaggtgatccgttgcatcctgtggttgttcca 1798
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>gb|AC119148.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0035F15, complete sequence
          Length = 138335

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 99/116 (85%)
 Strand = Plus / Minus

                                                                         
Query: 499   ttgcgggtgacctcgaacacggtctcagagagccctagtgtcttgaggatcacggtgagg 558
             |||||||||||||||||||| ||||| ||||  ||||  ||||||||||| ||||| || 
Sbjct: 67116 ttgcgggtgacctcgaacacagtctcggagaagcctaaggtcttgaggatgacggtaaga 67057

                                                                     
Query: 559   aaggcgaggagccaggcggaggccgaggtgatgcgttgcatcctgtggttgttcca 614
             || || || ||||| || || || |||||||| |||||||||||||||||||||||
Sbjct: 67056 aatgccagtagccaagcagaagctgaggtgatccgttgcatcctgtggttgttcca 67001
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>tpg|BK000084.1| TPA: TPA_exp: Oryza sativa cellulose synthase-like H1 gene, complete
            cds
          Length = 5600

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 99/116 (85%)
 Strand = Plus / Minus

                                                                        
Query: 499  ttgcgggtgacctcgaacacggtctcagagagccctagtgtcttgaggatcacggtgagg 558
            |||||||||||||||||||| ||||| ||||  ||||  ||||||||||| ||||| || 
Sbjct: 5122 ttgcgggtgacctcgaacacagtctcggagaagcctaaggtcttgaggatgacggtaaga 5063

                                                                    
Query: 559  aaggcgaggagccaggcggaggccgaggtgatgcgttgcatcctgtggttgttcca 614
            || || || ||||| || || || |||||||| |||||||||||||||||||||||
Sbjct: 5062 aatgccagtagccaagcagaagctgaggtgatccgttgcatcctgtggttgttcca 5007
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 99/116 (85%)
 Strand = Plus / Minus

                                                                           
Query: 499     ttgcgggtgacctcgaacacggtctcagagagccctagtgtcttgaggatcacggtgagg 558
               |||||||||||||||||||| ||||| ||||  ||||  ||||||||||| ||||| || 
Sbjct: 9579043 ttgcgggtgacctcgaacacagtctcggagaagcctaaggtcttgaggatgacggtaaga 9578984

                                                                       
Query: 559     aaggcgaggagccaggcggaggccgaggtgatgcgttgcatcctgtggttgttcca 614
               || || || ||||| || || || |||||||| |||||||||||||||||||||||
Sbjct: 9578983 aatgccagtagccaagcagaagctgaggtgatccgttgcatcctgtggttgttcca 9578928
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>gb|AF435646.1| Oryza sativa CSLH1 mRNA, partial cds
          Length = 2393

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 99/116 (85%)
 Strand = Plus / Minus

                                                                        
Query: 499  ttgcgggtgacctcgaacacggtctcagagagccctagtgtcttgaggatcacggtgagg 558
            |||||||||||||||||||| ||||| ||||  ||||  ||||||||||| ||||| || 
Sbjct: 1894 ttgcgggtgacctcgaacacagtctcggagaagcctaaggtcttgaggatgacggtaaga 1835

                                                                    
Query: 559  aaggcgaggagccaggcggaggccgaggtgatgcgttgcatcctgtggttgttcca 614
            || || || ||||| || || || |||||||| |||||||||||||||||||||||
Sbjct: 1834 aatgccagtagccaagcagaagctgaggtgatccgttgcatcctgtggttgttcca 1779
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>dbj|AK121003.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023045B21, full
            insert sequence
          Length = 2658

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 99/116 (85%)
 Strand = Plus / Minus

                                                                        
Query: 499  ttgcgggtgacctcgaacacggtctcagagagccctagtgtcttgaggatcacggtgagg 558
            |||||||||||||||||||| ||||| ||||  ||||  ||||||||||| ||||| || 
Sbjct: 1959 ttgcgggtgacctcgaacacagtctcggagaagcctaaggtcttgaggatgacggtaaga 1900

                                                                    
Query: 559  aaggcgaggagccaggcggaggccgaggtgatgcgttgcatcctgtggttgttcca 614
            || || || ||||| || || || |||||||| |||||||||||||||||||||||
Sbjct: 1899 aatgccagtagccaagcagaagctgaggtgatccgttgcatcctgtggttgttcca 1844
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>dbj|AK069071.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010H01, full
            insert sequence
          Length = 2386

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 99/116 (85%)
 Strand = Plus / Minus

                                                                        
Query: 499  ttgcgggtgacctcgaacacggtctcagagagccctagtgtcttgaggatcacggtgagg 558
            |||||||||||||||||||| ||||| ||||  ||||  ||||||||||| ||||| || 
Sbjct: 1918 ttgcgggtgacctcgaacacagtctcggagaagcctaaggtcttgaggatgacggtaaga 1859

                                                                    
Query: 559  aaggcgaggagccaggcggaggccgaggtgatgcgttgcatcctgtggttgttcca 614
            || || || ||||| || || || |||||||| |||||||||||||||||||||||
Sbjct: 1858 aatgccagtagccaagcagaagctgaggtgatccgttgcatcctgtggttgttcca 1803
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>dbj|AK061162.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-A01, full
           insert sequence
          Length = 1187

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 99/116 (85%)
 Strand = Plus / Minus

                                                                       
Query: 499 ttgcgggtgacctcgaacacggtctcagagagccctagtgtcttgaggatcacggtgagg 558
           |||||||||||||||||||| ||||| ||||  ||||  ||||||||||| ||||| || 
Sbjct: 544 ttgcgggtgacctcgaacacagtctcggagaagcctaaggtcttgaggatgacggtaaga 485

                                                                   
Query: 559 aaggcgaggagccaggcggaggccgaggtgatgcgttgcatcctgtggttgttcca 614
           || || || ||||| || || || |||||||| |||||||||||||||||||||||
Sbjct: 484 aatgccagtagccaagcagaagctgaggtgatccgttgcatcctgtggttgttcca 429
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>dbj|AK060286.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-C08, full
            insert sequence
          Length = 1719

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 99/116 (85%)
 Strand = Plus / Minus

                                                                        
Query: 499  ttgcgggtgacctcgaacacggtctcagagagccctagtgtcttgaggatcacggtgagg 558
            |||||||||||||||||||| ||||| ||||  ||||  ||||||||||| ||||| || 
Sbjct: 1018 ttgcgggtgacctcgaacacagtctcggagaagcctaaggtcttgaggatgacggtaaga 959

                                                                    
Query: 559  aaggcgaggagccaggcggaggccgaggtgatgcgttgcatcctgtggttgttcca 614
            || || || ||||| || || || |||||||| |||||||||||||||||||||||
Sbjct: 958  aatgccagtagccaagcagaagctgaggtgatccgttgcatcctgtggttgttcca 903
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 99/116 (85%)
 Strand = Plus / Minus

                                                                           
Query: 499     ttgcgggtgacctcgaacacggtctcagagagccctagtgtcttgaggatcacggtgagg 558
               |||||||||||||||||||| ||||| ||||  ||||  ||||||||||| ||||| || 
Sbjct: 9585082 ttgcgggtgacctcgaacacagtctcggagaagcctaaggtcttgaggatgacggtaaga 9585023

                                                                       
Query: 559     aaggcgaggagccaggcggaggccgaggtgatgcgttgcatcctgtggttgttcca 614
               || || || ||||| || || || |||||||| |||||||||||||||||||||||
Sbjct: 9585022 aatgccagtagccaagcagaagctgaggtgatccgttgcatcctgtggttgttcca 9584967
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>ref|NM_185228.2| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2379

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 129/157 (82%)
 Strand = Plus / Minus

                                                                        
Query: 496  tccttgcgggtgacctcgaacacggtctcagagagccctagtgtcttgaggatcacggtg 555
            ||||| ||||||||||||||||| ||||| ||||| ||||  |||||||||| ||| || 
Sbjct: 2042 tccttacgggtgacctcgaacacagtctcggagaggcctatggtcttgaggagcacagta 1983

                                                                        
Query: 556  aggaaggcgaggagccaggcggaggccgaggtgatgcgttgcatcctgtggttgttccac 615
            |  || || || ||||| || ||||| ||  |||| |||||||| |||||||||||||||
Sbjct: 1982 aaaaatgctagtagccatgcagaggctgaaatgatccgttgcattctgtggttgttccac 1923

                                                 
Query: 616  caggcgcgggcagagagcccgcacttcttgtactcca 652
            ||||| ||  |||||||||| || | | |||||||||
Sbjct: 1922 caggcacgtacagagagcccacattccatgtactcca 1886
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>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16,
              complete sequence
          Length = 163738

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 129/157 (82%)
 Strand = Plus / Plus

                                                                          
Query: 496    tccttgcgggtgacctcgaacacggtctcagagagccctagtgtcttgaggatcacggtg 555
              ||||| ||||||||||||||||| ||||| ||||| ||||  |||||||||| ||| || 
Sbjct: 110419 tccttacgggtgacctcgaacacagtctcggagaggcctatggtcttgaggagcacagta 110478

                                                                          
Query: 556    aggaaggcgaggagccaggcggaggccgaggtgatgcgttgcatcctgtggttgttccac 615
              |  || || || ||||| || ||||| ||  |||| |||||||| |||||||||||||||
Sbjct: 110479 aaaaatgctagtagccatgcagaggctgaaatgatccgttgcattctgtggttgttccac 110538

                                                   
Query: 616    caggcgcgggcagagagcccgcacttcttgtactcca 652
              ||||| ||  |||||||||| || | | |||||||||
Sbjct: 110539 caggcacgtacagagagcccacattccatgtactcca 110575



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 127/157 (80%)
 Strand = Plus / Plus

                                                                          
Query: 496    tccttgcgggtgacctcgaacacggtctcagagagccctagtgtcttgaggatcacggtg 555
              ||||||| ||||||||| || || || || ||||| ||||  | |||||||| |||||| 
Sbjct: 103921 tccttgccggtgacctcaaaaacagtttcggagaggcctaaggacttgaggagcacggta 103980

                                                                          
Query: 556    aggaaggcgaggagccaggcggaggccgaggtgatgcgttgcatcctgtggttgttccac 615
              || || || ||   |||||| ||| ||||| |||| ||||||||||| || |||||||||
Sbjct: 103981 agaaatgctagtgtccaggcagagaccgagatgatccgttgcatcctatgattgttccac 104040

                                                   
Query: 616    caggcgcgggcagagagcccgcacttcttgtactcca 652
              || || ||||| ||||||||||||  | |||||||||
Sbjct: 104041 catgcacgggcggagagcccgcacgccatgtactcca 104077
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 129/157 (82%)
 Strand = Plus / Plus

                                                                            
Query: 496      tccttgcgggtgacctcgaacacggtctcagagagccctagtgtcttgaggatcacggtg 555
                ||||| ||||||||||||||||| ||||| ||||| ||||  |||||||||| ||| || 
Sbjct: 21296945 tccttacgggtgacctcgaacacagtctcggagaggcctatggtcttgaggagcacagta 21297004

                                                                            
Query: 556      aggaaggcgaggagccaggcggaggccgaggtgatgcgttgcatcctgtggttgttccac 615
                |  || || || ||||| || ||||| ||  |||| |||||||| |||||||||||||||
Sbjct: 21297005 aaaaatgctagtagccatgcagaggctgaaatgatccgttgcattctgtggttgttccac 21297064

                                                     
Query: 616      caggcgcgggcagagagcccgcacttcttgtactcca 652
                ||||| ||  |||||||||| || | | |||||||||
Sbjct: 21297065 caggcacgtacagagagcccacattccatgtactcca 21297101



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 127/157 (80%)
 Strand = Plus / Plus

                                                                            
Query: 496      tccttgcgggtgacctcgaacacggtctcagagagccctagtgtcttgaggatcacggtg 555
                ||||||| ||||||||| || || || || ||||| ||||  | |||||||| |||||| 
Sbjct: 21290447 tccttgccggtgacctcaaaaacagtttcggagaggcctaaggacttgaggagcacggta 21290506

                                                                            
Query: 556      aggaaggcgaggagccaggcggaggccgaggtgatgcgttgcatcctgtggttgttccac 615
                || || || ||   |||||| ||| ||||| |||| ||||||||||| || |||||||||
Sbjct: 21290507 agaaatgctagtgtccaggcagagaccgagatgatccgttgcatcctatgattgttccac 21290566

                                                     
Query: 616      caggcgcgggcagagagcccgcacttcttgtactcca 652
                || || ||||| ||||||||||||  | |||||||||
Sbjct: 21290567 catgcacgggcggagagcccgcacgccatgtactcca 21290603
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>ref|XM_472496.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2289

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 127/157 (80%)
 Strand = Plus / Minus

                                                                        
Query: 496  tccttgcgggtgacctcgaacacggtctcagagagccctagtgtcttgaggatcacggtg 555
            ||||||| ||||||||| || || || || ||||| ||||  | |||||||| |||||| 
Sbjct: 1949 tccttgccggtgacctcaaaaacagtttcggagaggcctaaggacttgaggagcacggta 1890

                                                                        
Query: 556  aggaaggcgaggagccaggcggaggccgaggtgatgcgttgcatcctgtggttgttccac 615
            || || || ||   |||||| ||| ||||| |||| ||||||||||| || |||||||||
Sbjct: 1889 agaaatgctagtgtccaggcagagaccgagatgatccgttgcatcctatgattgttccac 1830

                                                 
Query: 616  caggcgcgggcagagagcccgcacttcttgtactcca 652
            || || ||||| ||||||||||||  | |||||||||
Sbjct: 1829 catgcacgggcggagagcccgcacgccatgtactcca 1793
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>tpg|BK000085.1| TPA: TPA_exp: Oryza sativa (indica cultivar-group) cellulose
            synthase-like H2 gene, complete cds
          Length = 4907

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 127/157 (80%)
 Strand = Plus / Minus

                                                                        
Query: 496  tccttgcgggtgacctcgaacacggtctcagagagccctagtgtcttgaggatcacggtg 555
            ||||||| ||||||||| || || || || ||||| ||||  | |||||||| |||||| 
Sbjct: 4209 tccttgccggtgacctcaaaaacagtttcggagaggcctaaggacttgaggagcacggta 4150

                                                                        
Query: 556  aggaaggcgaggagccaggcggaggccgaggtgatgcgttgcatcctgtggttgttccac 615
            || || || ||   |||||| ||| ||||| |||| ||||||||||| || |||||||||
Sbjct: 4149 agaaatgctagtgtccaggcagagaccgagatgatccgttgcatcctatgattgttccac 4090

                                                 
Query: 616  caggcgcgggcagagagcccgcacttcttgtactcca 652
            || || ||||| ||||||||||||  | |||||||||
Sbjct: 4089 catgcacgggcggagagcccgcacgccatgtactcca 4053
to top
>gb|AC154739.2| Mus musculus BAC clone RP23-117B4 from 9, complete sequence
          Length = 196406

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 15     gagagagattgggagagatagatagata 42
              ||||||||| ||||||||||||||||||
Sbjct: 146175 gagagagatagggagagatagatagata 146148
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>gb|AC136735.7| Mus musculus chromosome 3, clone RP23-175G2, complete sequence
          Length = 182455

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 12     attgagagagattgggagagatagatagata 42
              |||||||||||||| || |||||||||||||
Sbjct: 134689 attgagagagattgagatagatagatagata 134659
to top
>ref|XM_479649.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 968

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 552 ggtgaggaaggcgaggagccag 573
           ||||||||||||||||||||||
Sbjct: 510 ggtgaggaaggcgaggagccag 489
to top
>ref|XM_507416.1| PREDICTED Oryza sativa (japonica cultivar-group), B1147B12.18 mRNA
          Length = 1107

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 552 ggtgaggaaggcgaggagccag 573
           ||||||||||||||||||||||
Sbjct: 520 ggtgaggaaggcgaggagccag 499
to top
>ref|XM_506615.2| PREDICTED Oryza sativa (japonica cultivar-group), B1147B12.18 mRNA
          Length = 1158

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 552 ggtgaggaaggcgaggagccag 573
           ||||||||||||||||||||||
Sbjct: 516 ggtgaggaaggcgaggagccag 495
to top
>gb|AF484556.1| Streptomyces atroolivaceus leinamycin biosynthetic gene cluster,
             complete sequence
          Length = 135638

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 458   cctcgtcggtgccggcgccgcc 479
             ||||||||||||||||||||||
Sbjct: 97793 cctcgtcggtgccggcgccgcc 97772
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>emb|CR691646.2|CNS0FWMI Tetraodon nigroviridis full-length cDNA
          Length = 1458

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 455 cggcctcgtcggtgccggcgcc 476
           ||||||||||||||||||||||
Sbjct: 162 cggcctcgtcggtgccggcgcc 141
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>emb|CR684390.2|CNS0FR0Y Tetraodon nigroviridis full-length cDNA
          Length = 1639

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 455 cggcctcgtcggtgccggcgcc 476
           ||||||||||||||||||||||
Sbjct: 336 cggcctcgtcggtgccggcgcc 315
to top
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29
          Length = 283100

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 456   ggcctcgtcggtgccggcgccg 477
             ||||||||||||||||||||||
Sbjct: 64001 ggcctcgtcggtgccggcgccg 64022
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
             complete sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 552   ggtgaggaaggcgaggagccag 573
             ||||||||||||||||||||||
Sbjct: 90071 ggtgaggaaggcgaggagccag 90092



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 17      gagagattgggagagataga 36
               ||||||||||||||||||||
Sbjct: 9480196 gagagattgggagagataga 9480215



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 460     tcgtcggtgccggcgccgccatcg 483
               ||||||| ||||||||||||||||
Sbjct: 3488141 tcgtcggagccggcgccgccatcg 3488164
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>dbj|AP004654.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0015C07
          Length = 149079

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 552  ggtgaggaaggcgaggagccag 573
            ||||||||||||||||||||||
Sbjct: 5406 ggtgaggaaggcgaggagccag 5427
to top
>dbj|AP005406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1147B12
          Length = 127902

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 552   ggtgaggaaggcgaggagccag 573
             ||||||||||||||||||||||
Sbjct: 90071 ggtgaggaaggcgaggagccag 90092
to top
>dbj|AK104211.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-D02, full
           insert sequence
          Length = 1107

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 552 ggtgaggaaggcgaggagccag 573
           ||||||||||||||||||||||
Sbjct: 520 ggtgaggaaggcgaggagccag 499
to top
>dbj|AK070102.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047K10, full
           insert sequence
          Length = 968

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 552 ggtgaggaaggcgaggagccag 573
           ||||||||||||||||||||||
Sbjct: 510 ggtgaggaaggcgaggagccag 489
to top
>dbj|AK061172.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-B08, full
           insert sequence
          Length = 1160

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 552 ggtgaggaaggcgaggagccag 573
           ||||||||||||||||||||||
Sbjct: 516 ggtgaggaaggcgaggagccag 495
to top
>gb|AC117803.12| Mus musculus chromosome 17, clone RP24-562I11, complete sequence
          Length = 168136

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                          
Query: 15    gagagagattggg-agagatagatagata 42
             ||||||||||||| |||||||||||||||
Sbjct: 27954 gagagagattggggagagatagatagata 27926
to top
>ref|XM_461620.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G02244g)
           partial mRNA
          Length = 3594

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 95  gttacatgttccaatggtaga 115
           |||||||||||||||||||||
Sbjct: 168 gttacatgttccaatggtaga 188
to top
>gb|AC055772.16| Mus musculus chromosome 12, clone RP23-291K4, complete sequence
          Length = 168350

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 38    agatacattgggtcaaacttccttt 62
             ||||||| |||||||||||||||||
Sbjct: 44847 agatacactgggtcaaacttccttt 44871
to top
>emb|AL049557.19|HSJ773A18 Human DNA sequence from clone RP4-773A18 on chromosome 1p13.2-21.1
             Contains a keratin 18 (KRT18) pseudogene, the 3' end of
             the RAP1A gene for RAP1A member of RAS oncogene family,
             three novel genes, the DDX20 gene for DEAD
             (Asp-Glu-Ala-Asp) box polypeptide 20, the 3' end of the
             KCND3 gene for potassium voltage-gated channel
             Shal-related subfamily member 3 and two CpG islands,
             complete sequence
          Length = 128379

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 464   cggtgccggcgccgccatcgg 484
             |||||||||||||||||||||
Sbjct: 92068 cggtgccggcgccgccatcgg 92088
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>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces
              hansenii
          Length = 2051428

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 95     gttacatgttccaatggtaga 115
              |||||||||||||||||||||
Sbjct: 159635 gttacatgttccaatggtaga 159615
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>gb|AE011857.1| Xanthomonas axonopodis pv. citri str. 306,  section 235 of 469 of the
            complete genome
          Length = 12995

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 462  gtcggtgccggcgccgccatc 482
            |||||||||||||||||||||
Sbjct: 2495 gtcggtgccggcgccgccatc 2515
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 28     agagatagatagatacattgg 48
              |||||||||||||||||||||
Sbjct: 280980 agagatagatagatacattgg 281000
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 28     agagatagatagatacattgg 48
              |||||||||||||||||||||
Sbjct: 260933 agagatagatagatacattgg 260953
to top
>dbj|AK072914.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150I16,
          full insert sequence
          Length = 3183

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 28 agagatagatagatacattgg 48
          |||||||||||||||||||||
Sbjct: 92 agagatagatagatacattgg 72
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 28     agagatagatagatacattgg 48
              |||||||||||||||||||||
Sbjct: 260933 agagatagatagatacattgg 260953
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 28     agagatagatagatacattgg 48
              |||||||||||||||||||||
Sbjct: 280980 agagatagatagatacattgg 281000
to top
>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa from
             chromosome 11 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 160673

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 28    agagatagatagatacattgg 48
             |||||||||||||||||||||
Sbjct: 44060 agagatagatagatacattgg 44040
to top
>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 152222

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 28    agagatagatagatacattgg 48
             |||||||||||||||||||||
Sbjct: 14031 agagatagatagatacattgg 14051
to top
>emb|CT010483.12| Mouse DNA sequence from clone RP23-281L8 on chromosome 17, complete
             sequence
          Length = 189895

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Plus

                                          
Query: 15    gagagagattggg-agagatagatagata 42
             ||||||||||||| |||||||||||||||
Sbjct: 61702 gagagagattggggagagatagatagata 61730
to top
>gb|AF007560.1|AF007560 Mus musculus presenilin-1 gene, alternatively spliced transcripts,
            complete cds
          Length = 48974

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 38   agatacattgggtcaaacttccttt 62
            ||||||| |||||||||||||||||
Sbjct: 1419 agatacactgggtcaaacttccttt 1395
to top
>ref|XM_511908.1| PREDICTED: Pan troglodytes similar to Heat shock transcription
           factor, Y-linked (Heat shock transcription factor 2-like
           protein) (HSF2-like) (LOC455156), mRNA
          Length = 815

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 572 aggcggaggccgaggtgatg 591
           ||||||||||||||||||||
Sbjct: 618 aggcggaggccgaggtgatg 599
to top
>ref|XM_480199.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1291

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 460 tcgtcggtgccggcgccgccatcg 483
           ||||||| ||||||||||||||||
Sbjct: 223 tcgtcggagccggcgccgccatcg 200
to top
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 399    gagcgccgtcaccgggatga 418
              ||||||||||||||||||||
Sbjct: 865385 gagcgccgtcaccgggatga 865404
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 347      cgatgacggcgcgccatgcc 366
                ||||||||||||||||||||
Sbjct: 26497391 cgatgacggcgcgccatgcc 26497410
to top
>emb|AJ315970.1|PFL315970 Platichthys flesus microsatellite DNA, clone StPfl001
          Length = 310

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 15  gagagagattgggagagatagatagata 42
           ||||||||| | ||||||||||||||||
Sbjct: 114 gagagagatagagagagatagatagata 87
to top
>emb|BX927114.16| Zebrafish DNA sequence from clone DKEY-1C7 in linkage group 1, complete
             sequence
          Length = 170755

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 233   catgctttcccctgctgaca 252
             ||||||||||||||||||||
Sbjct: 69048 catgctttcccctgctgaca 69029
to top
>gb|AC130202.1| Mus musculus BAC clone RP24-480M3 from 9, complete sequence
          Length = 178779

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 15     gagagagattgggagagatagatagata 42
              ||||||||| |||| |||||||||||||
Sbjct: 109349 gagagagatagggatagatagatagata 109376
to top
>gb|AC159272.2| Mus musculus BAC clone RP23-423J20 from chromosome 13, complete
             sequence
          Length = 186588

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                         
Query: 15    gagagagattgggagagatagatagata 42
             ||||||||| ||||||||||||||||||
Sbjct: 19666 gagagagat-gggagagatagatagata 19692
to top
>gb|CP000318.1| Polaromonas sp. JS666 plasmid 2, complete sequence
          Length = 338007

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 460    tcgtcggtgccggcgccgcc 479
              ||||||||||||||||||||
Sbjct: 270308 tcgtcggtgccggcgccgcc 270327
to top
>gb|AC105631.4| Rattus norvegicus 1 BAC CH230-132J4 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 211624

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 15    gagagagattgggagagatagatagata 42
             ||||||||||| |||||||||| |||||
Sbjct: 88835 gagagagattgagagagatagagagata 88862
to top
>emb|Z93338.1|ASZ93338 A.simplex ksdI genes and three open reading frames
          Length = 3289

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 460 tcgtcggtgccggcgccgccatcg 483
           |||||| |||||||||||||||||
Sbjct: 860 tcgtcgatgccggcgccgccatcg 883
to top
>gb|AC122371.4| Mus musculus BAC clone RP23-459C10 from chromosome 13, complete
             sequence
          Length = 177577

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                         
Query: 15    gagagagattgggagagatagatagata 42
             ||||||||| ||||||||||||||||||
Sbjct: 30578 gagagagat-gggagagatagatagata 30552
to top
>gb|AC159886.2| Mus musculus BAC clone RP24-397P9 from chromosome 9, complete sequence
          Length = 191328

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 15     gagagagattgggagagatagatagata 42
              ||||||||  ||||||||||||||||||
Sbjct: 102569 gagagagagagggagagatagatagata 102596
to top
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 460     tcgtcggtgccggcgccgcc 479
               ||||||||||||||||||||
Sbjct: 3908153 tcgtcggtgccggcgccgcc 3908134
to top
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 455    cggcctcgtcggtgccggcgccgc 478
              |||||||||||||| |||||||||
Sbjct: 548213 cggcctcgtcggtgacggcgccgc 548236
to top
>emb|BX088698.22| Mouse DNA sequence from clone RP23-309D15 on chromosome X, complete
              sequence
          Length = 184201

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 15     gagagagattgggagagatagata 38
              |||||||||||||||||| |||||
Sbjct: 165813 gagagagattgggagagagagata 165836
to top
>gb|AC084732.1|AC084732 Homo sapiens BAC clone RP11-368G2 from 4, complete sequence
          Length = 181576

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 15    gagagagattgggagagatagatagata 42
             ||||||||  ||||||||||||||||||
Sbjct: 80347 gagagagacagggagagatagatagata 80320
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 23       ttgggagagatagatagata 42
                ||||||||||||||||||||
Sbjct: 16870552 ttgggagagatagatagata 16870533
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 347      cgatgacggcgcgccatgcc 366
                ||||||||||||||||||||
Sbjct: 26588714 cgatgacggcgcgccatgcc 26588733
to top
>gb|AC097484.3| Homo sapiens BAC clone RP11-147K6 from 4, complete sequence
          Length = 170217

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 15   gagagagattgggagagatagatagata 42
            ||||||||  ||||||||||||||||||
Sbjct: 5734 gagagagacagggagagatagatagata 5761
to top
>gb|AC079889.20| Oryza sativa chromosome 3 BAC OSJNBa0092M19 genomic sequence, complete
             sequence
          Length = 136712

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 347   cgatgacggcgcgccatgcc 366
             ||||||||||||||||||||
Sbjct: 20205 cgatgacggcgcgccatgcc 20224
to top
>gb|AC159270.2| Mus musculus BAC clone RP23-450E17 from chromosome 12, complete sequence
          Length = 174186

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 15     gagagagattgggagagatagatagata 42
              |||||| || ||||||||||||||||||
Sbjct: 113242 gagagacatagggagagatagatagata 113269
to top
>gb|AC008747.5|AC008747 Homo sapiens chromosome 19 clone CTD-2588C8, complete sequence
          Length = 159597

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 14     tgagagagattgggagagat 33
              ||||||||||||||||||||
Sbjct: 102568 tgagagagattgggagagat 102587
to top
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 557    ggaaggcgaggagccaggcg 576
              ||||||||||||||||||||
Sbjct: 680334 ggaaggcgaggagccaggcg 680353
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 463     tcggtgccggcgccgccatc 482
               ||||||||||||||||||||
Sbjct: 4093650 tcggtgccggcgccgccatc 4093669
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>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9,
           PAC clone:P0488D02
          Length = 154537

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 23  ttgggagagatagatagata 42
           ||||||||||||||||||||
Sbjct: 365 ttgggagagatagatagata 346
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>dbj|AP005559.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1163_C07
          Length = 107121

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    ttgggagagatagatagata 42
             ||||||||||||||||||||
Sbjct: 68243 ttgggagagatagatagata 68224
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>dbj|AP004698.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0498E12
          Length = 153523

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 460    tcgtcggtgccggcgccgccatcg 483
              ||||||| ||||||||||||||||
Sbjct: 121560 tcgtcggagccggcgccgccatcg 121583
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>dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0672D01
          Length = 146954

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 460   tcgtcggtgccggcgccgccatcg 483
             ||||||| ||||||||||||||||
Sbjct: 43858 tcgtcggagccggcgccgccatcg 43881
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>dbj|AP005157.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0005L24
          Length = 155365

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    gagagattgggagagataga 36
             ||||||||||||||||||||
Sbjct: 10226 gagagattgggagagataga 10245
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>dbj|AK109080.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-H03, full
           insert sequence
          Length = 1291

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 460 tcgtcggtgccggcgccgccatcg 483
           ||||||| ||||||||||||||||
Sbjct: 223 tcgtcggagccggcgccgccatcg 200
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>gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete sequence
          Length = 412348

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 484  gacgtgctgctttccttgcg 503
            ||||||||||||||||||||
Sbjct: 5174 gacgtgctgctttccttgcg 5155


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,958,035
Number of Sequences: 3902068
Number of extensions: 5958035
Number of successful extensions: 107568
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 106454
Number of HSP's gapped (non-prelim): 1114
length of query: 652
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 629
effective length of database: 17,143,297,704
effective search space: 10783134255816
effective search space used: 10783134255816
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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