ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal18j20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|S68729.1| LHC Ib-20=light-harvesting complex I [Hordeum vulga... 852 0.0
2gb|AF287276.1|AF287276 Hordeum vulgare chlorophyll a/b-binding p... 668 0.0
3ref|XM_482572.1| Oryza sativa (japonica cultivar-group), mRNA 468 e-128
4ref|XM_507585.1| PREDICTED Oryza sativa (japonica cultivar-group... 468 e-128
5ref|XM_507584.1| PREDICTED Oryza sativa (japonica cultivar-group... 468 e-128
6ref|XM_507583.1| PREDICTED Oryza sativa (japonica cultivar-group... 468 e-128
7ref|XM_507582.1| PREDICTED Oryza sativa (japonica cultivar-group... 468 e-128
8ref|XM_507239.2| PREDICTED Oryza sativa (japonica cultivar-group... 468 e-128
9dbj|AK104499.1| Oryza sativa (japonica cultivar-group) cDNA clon... 468 e-128
10dbj|AK104416.1| Oryza sativa (japonica cultivar-group) cDNA clon... 468 e-128
11dbj|AK067809.1| Oryza sativa (japonica cultivar-group) cDNA clon... 468 e-128
12dbj|AK067712.1| Oryza sativa (japonica cultivar-group) cDNA clon... 468 e-128
13dbj|AK060222.1| Oryza sativa (japonica cultivar-group) cDNA clon... 468 e-128
14dbj|AK103921.1| Oryza sativa (japonica cultivar-group) cDNA clon... 452 e-124
15ref|XM_482573.1| Oryza sativa (japonica cultivar-group), mRNA 442 e-121
16gb|AY445626.2| Oryza sativa (japonica cultivar-group) chlorophyl... 438 e-120
17gb|AF094775.1|AF094775 Oryza sativa chlorophyll a/b-binding prot... 420 e-114
18dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 325 9e-86
19dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic D... 325 9e-86
20emb|Z17226.1|PSLHCA411 Pinus sylvestris Lhca4*1-1 gene encoding ... 88 4e-14
21emb|Z16409.1|PSLHCA412 P.sylvestris Lhca4*1-2 mRNA encoding Lhca... 88 4e-14
22emb|X82497.1|NTCAG4 N.tabacum mRNA for light-harvesting Ch1 a/b ... 84 6e-13
23emb|X57706.1|LECAB11 L.esculentum DNA for CAB11 gene 78 3e-11
24emb|AJ579711.2|BVU579711 Beta vulgaris mRNA for chloroplast chlo... 72 2e-09
25emb|AJ309094.1|PPI309094 Pinus pinaster mRNA for putative chloro... 72 2e-09
26gb|BC002118.1| Mus musculus cDNA clone MGC:6623 IMAGE:3491066, c... 72 2e-09
27gb|AY233205.1| Vitis vinifera chlorophyll a/b-binding protein (L... 66 1e-07
28gb|AF359128.1| Pinus sylvestris plus tree E1101 LHC I type IV ch... 52 0.002
29gb|AF359127.1| Pinus sylvestris plus tree E635C LHC I type IV ch... 52 0.002
30ref|NM_114615.3| Arabidopsis thaliana CAB4; chlorophyll binding ... 50 0.008
31gb|BT000093.1| Arabidopsis thaliana chlorophyll A-B binding prot... 50 0.008
32emb|AL132955.1|ATF1P2 Arabidopsis thaliana DNA chromosome 3, BAC... 50 0.008
33gb|AY093080.1| Arabidopsis thaliana chlorophyll A-B binding prot... 50 0.008
34gb|AF325012.2|AF325012 Arabidopsis thaliana AT3g47470 (AT3g47470... 50 0.008
35emb|BX826089.1|CNS0A6C9 Arabidopsis thaliana Full-length cDNA Co... 50 0.008
36emb|BX825536.1|CNS0A6EC Arabidopsis thaliana Full-length cDNA Co... 50 0.008
37emb|BX823268.1|CNS0A6MH Arabidopsis thaliana Full-length cDNA Co... 50 0.008
38gb|AY086470.1| Arabidopsis thaliana clone 2531 mRNA, complete se... 50 0.008
39gb|M63931.1|ATHCABM Arabidopsis thaliana light-harvesting chloro... 50 0.008
40gb|BT015429.1| Arabidopsis thaliana At3g47470 mRNA sequence 48 0.031
41emb|BX824775.1|CNS0A6UB Arabidopsis thaliana Full-length cDNA Co... 48 0.031
42gb|AY109341.1| Zea mays CL4601_3 mRNA sequence 48 0.031
43gb|AC019013.2|AC019013 Genomic Sequence For Arabidopsis thaliana... 46 0.12
44gb|AC007852.9| Drosophila melanogaster clone BACR33A10, complete... 42 1.9
45gb|AC007588.5| Drosophila melanogaster clone BACR30O03, complete... 42 1.9
46gb|BC036687.1| Homo sapiens cDNA clone IMAGE:5259465 42 1.9
47gb|AC159237.2| Mus musculus BAC clone RP24-464G10 from chromosom... 42 1.9
48ref|XM_392275.2| PREDICTED: Apis mellifera similar to ENSANGP000... 42 1.9
49gb|AC090883.1|AC090883 Homo sapiens chromosome 3 clone RP11-117G... 42 1.9
50gb|AF276663.1|AF276663 Drosophila melanogaster comb (cg) gene, c... 42 1.9
51gb|AC027125.5| Homo sapiens chromosome 3 clone RP11-584M7 map 3p... 42 1.9
52dbj|AK027185.1| Homo sapiens cDNA: FLJ23532 fis, clone LNG06911 42 1.9
53emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 42 1.9
54gb|AY107739.1| Zea mays PCO089350 mRNA sequence 42 1.9
55gb|AE003815.4| Drosophila melanogaster chromosome 2R, section 35... 42 1.9
56gb|AC127582.4| Mus musculus BAC clone RP24-89J3 from 12, complet... 42 1.9
57ref|NM_188089.1| Oryza sativa (japonica cultivar-group), Ozsa852... 40 7.6
58gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 7.6
59emb|AL133520.5| Human DNA sequence from clone RP1-101A2 on chrom... 40 7.6
60ref|XM_567806.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 7.6
61gb|AC024608.4| Mus musculus strain C57BL6/J chromosome 5 clone R... 40 7.6
62ref|XM_535195.2| PREDICTED: Canis familiaris similar to inter-al... 40 7.6
63gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 7.6
64gb|AF448525.1| Mytilus galloprovincialis precollagen-P mRNA, com... 40 7.6
65emb|BX469902.7| Zebrafish DNA sequence from clone CH211-277G23 i... 40 7.6
66dbj|AB189167.1| Oryza sativa (japonica cultivar-group) OsIDHa mR... 40 7.6
67gb|S68728.1| LHC Ib-21=light-harvesting complex I [Hordeum vulga... 40 7.6
68gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 7.6
69dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
70gb|AC097525.3| Homo sapiens BAC clone RP11-627E8 from 2, complet... 40 7.6
71dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
72dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 7.6
73dbj|AB122118.1| Chlamydomonas reinhardtii LhcI-5 gene for light-... 40 7.6
74gb|AF218305.1|AF218305 Hordeum vulgare chlorophyll a/b binding p... 40 7.6
75dbj|AK059596.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.6
76gb|AF082100.1|AF082100 Streptomyces sp. MA6548 FK506 peptide syn... 40 7.6 
>gb|S68729.1| LHC Ib-20=light-harvesting complex I [Hordeum vulgare=barley,
           Prato, mRNA Chloroplast, 939 nt]
          Length = 939

 Score =  852 bits (430), Expect = 0.0
 Identities = 505/523 (96%), Gaps = 14/523 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttttaaaata-cacgcatgggtg-atattacaagtacagcctccgtcggaagcc-tgggc 57
           |||||||||| |||||||||||  |||||||||||||||| ||||||||||||| |||||
Sbjct: 901 ttttaaaataacacgcatgggtatatattacaagtacagc-tccgtcggaagccatgggc 843

                                                                       
Query: 58  gaatccacaaggacaaagtttcaccaccggaactttaagattacaacacgtttttgcact 117
           |||||||||||||||||||||||||||||||||      |||||||||||||||||||||
Sbjct: 842 gaatccacaaggacaaagtttcaccaccggaac------attacaacacgtttttgcact 789

                                                                       
Query: 118 gccacctactcctccacactttgtacatcctcagcaccccaaaataataattcagaccac 177
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 gccacctactcctccacactttgtacatcctcagcaccccaaaataataattcagaccac 729

                                                                       
Query: 178 ctgaaacctccttggtcggtgaaatcgacggatttattggccggagatggtctggatgat 237
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 ct-aaacctccttggtcggtgaaatcgacggatttattggccggagatggtctggatgat 670

                                                                       
Query: 238 ggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccggt 297
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 669 ggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccgtg 610

                                                                       
Query: 298 cacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcgag 357
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 cacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcgag 550

                                                                       
Query: 358 ctccttctccttgttctcgagggtgggggcgaagttgagggggttgaagacgctgccggg 417
           |||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||
Sbjct: 549 ctccttctccttgttctcgag---gggggcgaagttgagggggttgaagactctgccggg 493

                                                                       
Query: 418 gtagccgcactcgtggggcgggaggctgtagctcttgaagatggggtcctggttgacgga 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gtagccgcactcgtggggcgggaggctgtagctcttgaagatggggtcctggttgacgga 433

                                                      
Query: 478 gcccgggttcttgatgtcctgccaccgccggatctcgacgtag 520
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gcccgggttcttgatgtcctgccaccgccggatctcgacgtag 390
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>gb|AF287276.1|AF287276 Hordeum vulgare chlorophyll a/b-binding protein precursor (Lhca4)
           mRNA, partial cds; nuclear gene for chloroplast product
          Length = 687

 Score =  668 bits (337), Expect = 0.0
 Identities = 337/337 (100%)
 Strand = Plus / Minus

                                                                       
Query: 211 ttattggccggagatggtctggatgatggtgttgtgccatgggtcggccaggtgctgctg 270
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 ttattggccggagatggtctggatgatggtgttgtgccatgggtcggccaggtgctgctg 628

                                                                       
Query: 271 caggttctcgaacggccccttcccggtcacgttgtgctgcaccaggaaccccaggaacgc 330
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 caggttctcgaacggccccttcccggtcacgttgtgctgcaccaggaaccccaggaacgc 568

                                                                       
Query: 331 cagcatggccagtctcccgttggcgagctccttctccttgttctcgagggtgggggcgaa 390
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 cagcatggccagtctcccgttggcgagctccttctccttgttctcgagggtgggggcgaa 508

                                                                       
Query: 391 gttgagggggttgaagacgctgccggggtagccgcactcgtggggcgggaggctgtagct 450
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gttgagggggttgaagacgctgccggggtagccgcactcgtggggcgggaggctgtagct 448

                                                                       
Query: 451 cttgaagatggggtcctggttgacggagcccgggttcttgatgtcctgccaccgccggat 510
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 cttgaagatggggtcctggttgacggagcccgggttcttgatgtcctgccaccgccggat 388

                                                
Query: 511 ctcgacgtagtggaagaggatgaactcgatgacgaag 547
           |||||||||||||||||||||||||||||||||||||
Sbjct: 387 ctcgacgtagtggaagaggatgaactcgatgacgaag 351
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>ref|XM_482572.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1070

 Score =  468 bits (236), Expect = e-128
 Identities = 299/320 (93%)
 Strand = Plus / Minus

                                                                       
Query: 227 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 286
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 787 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 728

                                                                       
Query: 287 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 346
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 727 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 668

                                                                       
Query: 347 ccgttggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaag 406
           ||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||
Sbjct: 667 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagggggttgaag 608

                                                                       
Query: 407 acgctgccggggtagccgcactcgtggggcgggaggctgtagctcttgaagatggggtcc 466
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 607 acgctgccggggtagccgcactcgtgcggcgggaggctgtagctcttgaagatggggtcc 548

                                                                       
Query: 467 tggttgacggagcccgggttcttgatgtcctgccaccgccggatctcgacgtagtggaag 526
           ||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 547 tggttgacgcagccagggttcttgatgtcctgccaccgccggatctccacgtagtggaac 488

                               
Query: 527 aggatgaactcgatgacgaa 546
           ||||||||||||||||||||
Sbjct: 487 aggatgaactcgatgacgaa 468
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>ref|XM_507585.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA
          Length = 1138

 Score =  468 bits (236), Expect = e-128
 Identities = 299/320 (93%)
 Strand = Plus / Minus

                                                                       
Query: 227 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 286
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 791 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 732

                                                                       
Query: 287 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 346
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 731 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 672

                                                                       
Query: 347 ccgttggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaag 406
           ||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||
Sbjct: 671 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagggggttgaag 612

                                                                       
Query: 407 acgctgccggggtagccgcactcgtggggcgggaggctgtagctcttgaagatggggtcc 466
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 611 acgctgccggggtagccgcactcgtgcggcgggaggctgtagctcttgaagatggggtcc 552

                                                                       
Query: 467 tggttgacggagcccgggttcttgatgtcctgccaccgccggatctcgacgtagtggaag 526
           ||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 551 tggttgacgcagccagggttcttgatgtcctgccaccgccggatctccacgtagtggaac 492

                               
Query: 527 aggatgaactcgatgacgaa 546
           ||||||||||||||||||||
Sbjct: 491 aggatgaactcgatgacgaa 472
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>ref|XM_507584.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA
          Length = 1138

 Score =  468 bits (236), Expect = e-128
 Identities = 299/320 (93%)
 Strand = Plus / Minus

                                                                       
Query: 227 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 286
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 791 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 732

                                                                       
Query: 287 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 346
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 731 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 672

                                                                       
Query: 347 ccgttggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaag 406
           ||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||
Sbjct: 671 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagggggttgaag 612

                                                                       
Query: 407 acgctgccggggtagccgcactcgtggggcgggaggctgtagctcttgaagatggggtcc 466
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 611 acgctgccggggtagccgcactcgtgcggcgggaggctgtagctcttgaagatggggtcc 552

                                                                       
Query: 467 tggttgacggagcccgggttcttgatgtcctgccaccgccggatctcgacgtagtggaag 526
           ||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 551 tggttgacgcagccagggttcttgatgtcctgccaccgccggatctccacgtagtggaac 492

                               
Query: 527 aggatgaactcgatgacgaa 546
           ||||||||||||||||||||
Sbjct: 491 aggatgaactcgatgacgaa 472
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>ref|XM_507583.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA
          Length = 1178

 Score =  468 bits (236), Expect = e-128
 Identities = 299/320 (93%)
 Strand = Plus / Minus

                                                                       
Query: 227 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 286
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 788 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 729

                                                                       
Query: 287 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 346
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 728 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 669

                                                                       
Query: 347 ccgttggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaag 406
           ||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||
Sbjct: 668 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagggggttgaag 609

                                                                       
Query: 407 acgctgccggggtagccgcactcgtggggcgggaggctgtagctcttgaagatggggtcc 466
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 608 acgctgccggggtagccgcactcgtgcggcgggaggctgtagctcttgaagatggggtcc 549

                                                                       
Query: 467 tggttgacggagcccgggttcttgatgtcctgccaccgccggatctcgacgtagtggaag 526
           ||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 548 tggttgacgcagccagggttcttgatgtcctgccaccgccggatctccacgtagtggaac 489

                               
Query: 527 aggatgaactcgatgacgaa 546
           ||||||||||||||||||||
Sbjct: 488 aggatgaactcgatgacgaa 469
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>ref|XM_507582.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA
          Length = 1188

 Score =  468 bits (236), Expect = e-128
 Identities = 299/320 (93%)
 Strand = Plus / Minus

                                                                       
Query: 227 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 286
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 787 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 728

                                                                       
Query: 287 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 346
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 727 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 668

                                                                       
Query: 347 ccgttggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaag 406
           ||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||
Sbjct: 667 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagggggttgaag 608

                                                                       
Query: 407 acgctgccggggtagccgcactcgtggggcgggaggctgtagctcttgaagatggggtcc 466
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 607 acgctgccggggtagccgcactcgtgcggcgggaggctgtagctcttgaagatggggtcc 548

                                                                       
Query: 467 tggttgacggagcccgggttcttgatgtcctgccaccgccggatctcgacgtagtggaag 526
           ||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 547 tggttgacgcagccagggttcttgatgtcctgccaccgccggatctccacgtagtggaac 488

                               
Query: 527 aggatgaactcgatgacgaa 546
           ||||||||||||||||||||
Sbjct: 487 aggatgaactcgatgacgaa 468
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>ref|XM_507239.2| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA
          Length = 1191

 Score =  468 bits (236), Expect = e-128
 Identities = 299/320 (93%)
 Strand = Plus / Minus

                                                                       
Query: 227 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 286
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 790 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 731

                                                                       
Query: 287 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 346
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 730 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 671

                                                                       
Query: 347 ccgttggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaag 406
           ||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||
Sbjct: 670 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagggggttgaag 611

                                                                       
Query: 407 acgctgccggggtagccgcactcgtggggcgggaggctgtagctcttgaagatggggtcc 466
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 610 acgctgccggggtagccgcactcgtgcggcgggaggctgtagctcttgaagatggggtcc 551

                                                                       
Query: 467 tggttgacggagcccgggttcttgatgtcctgccaccgccggatctcgacgtagtggaag 526
           ||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 550 tggttgacgcagccagggttcttgatgtcctgccaccgccggatctccacgtagtggaac 491

                               
Query: 527 aggatgaactcgatgacgaa 546
           ||||||||||||||||||||
Sbjct: 490 aggatgaactcgatgacgaa 471
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>dbj|AK104499.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E04, full
           insert sequence
          Length = 1140

 Score =  468 bits (236), Expect = e-128
 Identities = 299/320 (93%)
 Strand = Plus / Minus

                                                                       
Query: 227 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 286
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 791 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 732

                                                                       
Query: 287 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 346
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 731 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 672

                                                                       
Query: 347 ccgttggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaag 406
           ||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||
Sbjct: 671 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagggggttgaag 612

                                                                       
Query: 407 acgctgccggggtagccgcactcgtggggcgggaggctgtagctcttgaagatggggtcc 466
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 611 acgctgccggggtagccgcactcgtgcggcgggaggctgtagctcttgaagatggggtcc 552

                                                                       
Query: 467 tggttgacggagcccgggttcttgatgtcctgccaccgccggatctcgacgtagtggaag 526
           ||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 551 tggttgacgcagccagggttcttgatgtcctgccaccgccggatctccacgtagtggaac 492

                               
Query: 527 aggatgaactcgatgacgaa 546
           ||||||||||||||||||||
Sbjct: 491 aggatgaactcgatgacgaa 472
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>dbj|AK104416.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-G03, full
           insert sequence
          Length = 1177

 Score =  468 bits (236), Expect = e-128
 Identities = 299/320 (93%)
 Strand = Plus / Minus

                                                                       
Query: 227 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 286
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 788 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 729

                                                                       
Query: 287 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 346
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 728 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 669

                                                                       
Query: 347 ccgttggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaag 406
           ||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||
Sbjct: 668 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagggggttgaag 609

                                                                       
Query: 407 acgctgccggggtagccgcactcgtggggcgggaggctgtagctcttgaagatggggtcc 466
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 608 acgctgccggggtagccgcactcgtgcggcgggaggctgtagctcttgaagatggggtcc 549

                                                                       
Query: 467 tggttgacggagcccgggttcttgatgtcctgccaccgccggatctcgacgtagtggaag 526
           ||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 548 tggttgacgcagccagggttcttgatgtcctgccaccgccggatctccacgtagtggaac 489

                               
Query: 527 aggatgaactcgatgacgaa 546
           ||||||||||||||||||||
Sbjct: 488 aggatgaactcgatgacgaa 469
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>dbj|AK067809.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013121A03, full
           insert sequence
          Length = 1190

 Score =  468 bits (236), Expect = e-128
 Identities = 299/320 (93%)
 Strand = Plus / Minus

                                                                       
Query: 227 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 286
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 789 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 730

                                                                       
Query: 287 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 346
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 729 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 670

                                                                       
Query: 347 ccgttggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaag 406
           ||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||
Sbjct: 669 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagggggttgaag 610

                                                                       
Query: 407 acgctgccggggtagccgcactcgtggggcgggaggctgtagctcttgaagatggggtcc 466
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 609 acgctgccggggtagccgcactcgtgcggcgggaggctgtagctcttgaagatggggtcc 550

                                                                       
Query: 467 tggttgacggagcccgggttcttgatgtcctgccaccgccggatctcgacgtagtggaag 526
           ||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 549 tggttgacgcagccagggttcttgatgtcctgccaccgccggatctccacgtagtggaac 490

                               
Query: 527 aggatgaactcgatgacgaa 546
           ||||||||||||||||||||
Sbjct: 489 aggatgaactcgatgacgaa 470
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>dbj|AK067712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120A20, full
           insert sequence
          Length = 1138

 Score =  468 bits (236), Expect = e-128
 Identities = 299/320 (93%)
 Strand = Plus / Minus

                                                                       
Query: 227 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 286
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 791 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 732

                                                                       
Query: 287 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 346
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 731 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 672

                                                                       
Query: 347 ccgttggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaag 406
           ||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||
Sbjct: 671 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagggggttgaag 612

                                                                       
Query: 407 acgctgccggggtagccgcactcgtggggcgggaggctgtagctcttgaagatggggtcc 466
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 611 acgctgccggggtagccgcactcgtgcggcgggaggctgtagctcttgaagatggggtcc 552

                                                                       
Query: 467 tggttgacggagcccgggttcttgatgtcctgccaccgccggatctcgacgtagtggaag 526
           ||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 551 tggttgacgcagccagggttcttgatgtcctgccaccgccggatctccacgtagtggaac 492

                               
Query: 527 aggatgaactcgatgacgaa 546
           ||||||||||||||||||||
Sbjct: 491 aggatgaactcgatgacgaa 472
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>dbj|AK060222.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-F08, full
           insert sequence
          Length = 1078

 Score =  468 bits (236), Expect = e-128
 Identities = 299/320 (93%)
 Strand = Plus / Minus

                                                                       
Query: 227 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 286
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 796 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 737

                                                                       
Query: 287 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 346
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 736 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 677

                                                                       
Query: 347 ccgttggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaag 406
           ||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||
Sbjct: 676 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagggggttgaag 617

                                                                       
Query: 407 acgctgccggggtagccgcactcgtggggcgggaggctgtagctcttgaagatggggtcc 466
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 616 acgctgccggggtagccgcactcgtgcggcgggaggctgtagctcttgaagatggggtcc 557

                                                                       
Query: 467 tggttgacggagcccgggttcttgatgtcctgccaccgccggatctcgacgtagtggaag 526
           ||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 556 tggttgacgcagccagggttcttgatgtcctgccaccgccggatctccacgtagtggaac 497

                               
Query: 527 aggatgaactcgatgacgaa 546
           ||||||||||||||||||||
Sbjct: 496 aggatgaactcgatgacgaa 477
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>dbj|AK103921.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B07, full
           insert sequence
          Length = 1193

 Score =  452 bits (228), Expect = e-124
 Identities = 297/320 (92%)
 Strand = Plus / Minus

                                                                       
Query: 227 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 286
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 792 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 733

                                                                       
Query: 287 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 346
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 732 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 673

                                                                       
Query: 347 ccgttggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaag 406
           ||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||
Sbjct: 672 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagggggttgaag 613

                                                                       
Query: 407 acgctgccggggtagccgcactcgtggggcgggaggctgtagctcttgaagatggggtcc 466
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 612 acgctgccggggtagccgcactcgtgcggcgggaggctgtagctcttgaagatggggtcc 553

                                                                       
Query: 467 tggttgacggagcccgggttcttgatgtcctgccaccgccggatctcgacgtagtggaag 526
           ||||||||| |||| |||| ||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 552 tggttgacgcagccagggtccttgatgtcctgccaccgccggatctccacgtagtggaac 493

                               
Query: 527 aggatgaactcgatgacgaa 546
            |||||||||||||||||||
Sbjct: 492 gggatgaactcgatgacgaa 473
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>ref|XM_482573.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 576

 Score =  442 bits (223), Expect = e-121
 Identities = 293/315 (93%), Gaps = 1/315 (0%)
 Strand = Plus / Plus

                                                                       
Query: 233 atgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttc 292
           ||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||||||||
Sbjct: 1   atgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggccccttc 60

                                                                       
Query: 293 ccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctccc-gtt 351
              |||||||||||||||||||||||||||| |||||||||||| ||||| ||||| |||
Sbjct: 61  tgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctccctgtt 120

                                                                       
Query: 352 ggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaagacgct 411
           |||||||||||||||||||  ||||||||||||  |||||||||||||||||||||||||
Sbjct: 121 ggcgagctccttctccttggcctcgagggtgggctcgaagttgagggggttgaagacgct 180

                                                                       
Query: 412 gccggggtagccgcactcgtggggcgggaggctgtagctcttgaagatggggtcctggtt 471
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gccggggtagccgcactcgtgcggcgggaggctgtagctcttgaagatggggtcctggtt 240

                                                                       
Query: 472 gacggagcccgggttcttgatgtcctgccaccgccggatctcgacgtagtggaagaggat 531
           |||| |||| |||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 241 gacgcagccagggttcttgatgtcctgccaccgccggatctccacgtagtggaacaggat 300

                          
Query: 532 gaactcgatgacgaa 546
           |||||||||||||||
Sbjct: 301 gaactcgatgacgaa 315
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>gb|AY445626.2| Oryza sativa (japonica cultivar-group) chlorophyll a/b binding
           protein presusor mRNA, complete cds; nuclear gene for
           chloroplast product
          Length = 1128

 Score =  438 bits (221), Expect = e-120
 Identities = 298/321 (92%), Gaps = 2/321 (0%)
 Strand = Plus / Minus

                                                                       
Query: 227 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 286
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 767 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 708

                                                                       
Query: 287 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 346
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 707 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 648

                                                                       
Query: 347 ccgttggcgagctccttctccttgttctcgagggtgggggcgaagttgaggggg-ttgaa 405
           ||||||||||||||||||||||||  ||||||||||||  |||||||||||||| |||||
Sbjct: 647 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgaggggggttgaa 588

                                                                       
Query: 406 gacgctgccggggtagccgcactcgtggggcgggaggctgtagctcttgaagatggggtc 465
           |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 587 gacgctgccggg-tagccgcactcgtgcggcgggaggctgtagctcttgaagatggggtc 529

                                                                       
Query: 466 ctggttgacggagcccgggttcttgatgtcctgccaccgccggatctcgacgtagtggaa 525
           |||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 528 ctggttgacgcagccagggttcttgatgtcctgccaccgccggatctccacgtagtggaa 469

                                
Query: 526 gaggatgaactcgatgacgaa 546
            ||||||||||||||||||||
Sbjct: 468 caggatgaactcgatgacgaa 448
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>gb|AF094775.1|AF094775 Oryza sativa chlorophyll a/b-binding protein presursor (Cab27)
           mRNA, nuclear gene encoding chloroplast protein,
           complete cds
          Length = 1162

 Score =  420 bits (212), Expect = e-114
 Identities = 293/320 (91%)
 Strand = Plus / Minus

                                                                       
Query: 227 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 286
           ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 754 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 695

                                                                       
Query: 287 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 346
           ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 694 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 635

                                                                       
Query: 347 ccgttggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaag 406
           ||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||
Sbjct: 634 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagggggttgaag 575

                                                                       
Query: 407 acgctgccggggtagccgcactcgtggggcgggaggctgtagctcttgaagatggggtcc 466
           ||||||||||||||||||||||||| |   ||||| ||||||||||||||||||||||||
Sbjct: 574 acgctgccggggtagccgcactcgtcgctggggagtctgtagctcttgaagatggggtcc 515

                                                                       
Query: 467 tggttgacggagcccgggttcttgatgtcctgccaccgccggatctcgacgtagtggaag 526
           ||||||||| |||| ||||||||||||||||||||| | |||||||| ||||||||||| 
Sbjct: 514 tggttgacgcagccagggttcttgatgtcctgccactggcggatctccacgtagtggaac 455

                               
Query: 527 aggatgaactcgatgacgaa 546
           ||||||||||||||||||||
Sbjct: 454 aggatgaactcgatgacgaa 435
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  325 bits (164), Expect = 9e-86
 Identities = 191/200 (95%)
 Strand = Plus / Plus

                                                                            
Query: 347      ccgttggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaag 406
                ||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||
Sbjct: 21164651 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagggggttgaag 21164710

                                                                            
Query: 407      acgctgccggggtagccgcactcgtggggcgggaggctgtagctcttgaagatggggtcc 466
                |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 21164711 acgctgccggggtagccgcactcgtgcggcgggaggctgtagctcttgaagatggggtcc 21164770

                                                                            
Query: 467      tggttgacggagcccgggttcttgatgtcctgccaccgccggatctcgacgtagtggaag 526
                ||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 21164771 tggttgacgcagccagggttcttgatgtcctgccaccgccggatctccacgtagtggaac 21164830

                                    
Query: 527      aggatgaactcgatgacgaa 546
                ||||||||||||||||||||
Sbjct: 21164831 aggatgaactcgatgacgaa 21164850



 Score =  147 bits (74), Expect = 5e-32
 Identities = 110/122 (90%)
 Strand = Plus / Plus

                                                                            
Query: 227      gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 286
                ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 21164438 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 21164497

                                                                            
Query: 287      cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 346
                ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 21164498 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 21164557

                  
Query: 347      cc 348
                ||
Sbjct: 21164558 cc 21164559
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>dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0413H11
          Length = 147655

 Score =  325 bits (164), Expect = 9e-86
 Identities = 191/200 (95%)
 Strand = Plus / Plus

                                                                          
Query: 347    ccgttggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaag 406
              ||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||||
Sbjct: 135861 ccgttggcgagctccttctccttggcctcgagggtgggctcgaagttgagggggttgaag 135920

                                                                          
Query: 407    acgctgccggggtagccgcactcgtggggcgggaggctgtagctcttgaagatggggtcc 466
              |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 135921 acgctgccggggtagccgcactcgtgcggcgggaggctgtagctcttgaagatggggtcc 135980

                                                                          
Query: 467    tggttgacggagcccgggttcttgatgtcctgccaccgccggatctcgacgtagtggaag 526
              ||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 135981 tggttgacgcagccagggttcttgatgtcctgccaccgccggatctccacgtagtggaac 136040

                                  
Query: 527    aggatgaactcgatgacgaa 546
              ||||||||||||||||||||
Sbjct: 136041 aggatgaactcgatgacgaa 136060



 Score =  147 bits (74), Expect = 5e-32
 Identities = 110/122 (90%)
 Strand = Plus / Plus

                                                                          
Query: 227    gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 286
              ||||||||||||||||||||||| ||||| | |||||||||| ||||||| ||||| |||
Sbjct: 135648 gtctggatgatggtgttgtgccacgggtcagacaggtgctgcagcaggttgtcgaagggc 135707

                                                                          
Query: 287    cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 346
              ||||||   |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 135708 cccttctgcgtcacgttgtgctgcaccaggaaccccaagaacgccagcatcgccagcctc 135767

                
Query: 347    cc 348
              ||
Sbjct: 135768 cc 135769
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>emb|Z17226.1|PSLHCA411 Pinus sylvestris Lhca4*1-1 gene encoding Lhca4 protein (type 4
           protein of light-harvesting complex of photosystem I)
          Length = 1013

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 140/172 (81%)
 Strand = Plus / Minus

                                                                       
Query: 236 atggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccg 295
           ||||||||||||||||| || | ||| || ||| ||| ||| |||||||| ||||| || 
Sbjct: 735 atggtgttgtgccatggatcagacagatgttgcagcaagttgtcgaacgggccctttcct 676

                                                                       
Query: 296 gtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcg 355
           || || ||||| ||||| |  || |||||||| || | ||| |||| |||||| ||||||
Sbjct: 675 gttacattgtgttgcactacaaatcccaggaatgctaacattgccaatctcccattggcg 616

                                                               
Query: 356 agctccttctccttgttctcgagggtgggggcgaagttgagggggttgaaga 407
           |||||||||||||||  ||| | ||  |||| ||||||||| ||||||||||
Sbjct: 615 agctccttctccttggcctccatggatggggagaagttgagagggttgaaga 564
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>emb|Z16409.1|PSLHCA412 P.sylvestris Lhca4*1-2 mRNA encoding Lhca4 protein (type 4 protein
           of light-harvesting complex of photosystem I) (partial)
          Length = 968

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 140/172 (81%)
 Strand = Plus / Minus

                                                                       
Query: 236 atggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccg 295
           ||||||||||||||||| || | ||| || ||| ||| ||| |||||||| ||||| || 
Sbjct: 712 atggtgttgtgccatggatcagacagatgttgcagcaagttgtcgaacgggccctttcct 653

                                                                       
Query: 296 gtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcg 355
           || || ||||| ||||| |  || |||||||| || | ||| |||| |||||| ||||||
Sbjct: 652 gttacattgtgttgcactacaaatcccaggaatgctaacattgccaatctcccattggcg 593

                                                               
Query: 356 agctccttctccttgttctcgagggtgggggcgaagttgagggggttgaaga 407
           |||||||||||||||  ||| | ||  |||| ||||||||| ||||||||||
Sbjct: 592 agctccttctccttggcctccatggatggggagaagttgagagggttgaaga 541
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>emb|X82497.1|NTCAG4 N.tabacum mRNA for light-harvesting Ch1 a/b binding protein
          Length = 726

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 89/105 (84%)
 Strand = Plus / Minus

                                                                       
Query: 442 gctgtagctcttgaagatggggtcctggttgacggagcccgggttcttgatgtcctgcca 501
           ||||||| |||||||||||||| | ||||| ||    || |||||||||||||| |||||
Sbjct: 375 gctgtagttcttgaagatggggncttggttaacacttcctgggttcttgatgtcttgcca 316

                                                        
Query: 502 ccgccggatctcgacgtagtggaagaggatgaactcgatgacgaa 546
           ||  | |||||||||||||||||| | |||||||||||| |||||
Sbjct: 315 ccttctgatctcgacgtagtggaacaagatgaactcgatcacgaa 271



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 236 atggtgttgtgccatgggtcgg 257
           ||||||||||||||||||||||
Sbjct: 581 atggtgttgtgccatgggtcgg 560
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>emb|X57706.1|LECAB11 L.esculentum DNA for CAB11 gene
          Length = 1393

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                        
Query: 230  tggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggcccc 289
            |||||||||||||||||||||||||| |  ||||||||| | ||||| || || || |||
Sbjct: 1192 tggatgatggtgttgtgccatgggtcagagaggtgctgcagaaggttgtcaaaaggtccc 1133

                                   
Query: 290  ttcccggtcacgttgtgctgcac 312
            ||||| ||||| |||||||||||
Sbjct: 1132 ttcccagtcacattgtgctgcac 1110



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 84/99 (84%)
 Strand = Plus / Minus

                                                                       
Query: 442 gctgtagctcttgaagatggggtcctggttgacggagcccgggttcttgatgtcctgcca 501
           ||||||| |||||||||| ||||| ||||||||    || |||||||| ||||| |||||
Sbjct: 903 gctgtagttcttgaagatagggtcttggttgacacttcctgggttcttaatgtcttgcca 844

                                                  
Query: 502 ccgccggatctcgacgtagtggaagaggatgaactcgat 540
           ||  | |||||||||||||||||| | ||||||||||||
Sbjct: 843 ccttctgatctcgacgtagtggaacaagatgaactcgat 805
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>emb|AJ579711.2|BVU579711 Beta vulgaris mRNA for chloroplast chlorophyll a/b binding protein
           (cab11 gene)
          Length = 1062

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 117/144 (81%)
 Strand = Plus / Minus

                                                                       
Query: 227 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 286
           ||||| || |||||||||||||||||||| |  || |||||| | ||||| || || |||
Sbjct: 857 gtctgaataatggtgttgtgccatgggtctgatagatgctgcagaaggttatcaaaaggc 798

                                                                       
Query: 287 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 346
           ||||| || ||||| ||||| ||||| | ||| || | ||| |||| ||| |||| ||||
Sbjct: 797 ccctttccagtcacattgtgttgcacaatgaatcctaagaatgccaacattgccaatctc 738

                                   
Query: 347 ccgttggcgagctccttctccttg 370
           || || || |||||||||||||||
Sbjct: 737 ccattagcaagctccttctccttg 714



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 482 gggttcttgatgtcctgccaccgccggatctcgacgtagtggaagaggatgaactc 537
           |||||||||||||||||||| | ||  ||||| || |||||||| | |||||||||
Sbjct: 602 gggttcttgatgtcctgccatctccttatctccacatagtggaataagatgaactc 547
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>emb|AJ309094.1|PPI309094 Pinus pinaster mRNA for putative chlorophyll a/b-binding protein
           type 4
          Length = 819

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 138/172 (80%)
 Strand = Plus / Minus

                                                                       
Query: 236 atggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccg 295
           ||||||||||||||||| || | ||| || ||| ||| ||| |||||||| ||||| || 
Sbjct: 743 atggtgttgtgccatggatcagacagatgttgcagcaagttgtcgaacgggccctttcct 684

                                                                       
Query: 296 gtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcg 355
           || || ||||| ||||| |  || |||||||| || | ||| ||||  ||||| ||||| 
Sbjct: 683 gttacattgtgttgcactacaaatcccaggaatgctaacattgccaacctcccattggca 624

                                                               
Query: 356 agctccttctccttgttctcgagggtgggggcgaagttgagggggttgaaga 407
           |||||||||||||||  ||| | ||  |||| ||||||||| ||||||||||
Sbjct: 623 agctccttctccttggcctccatggatggggagaagttgagcgggttgaaga 572
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>gb|BC002118.1| Mus musculus cDNA clone MGC:6623 IMAGE:3491066, complete cds
          Length = 1008

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 117/144 (81%)
 Strand = Plus / Minus

                                                                       
Query: 227 gtctggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggc 286
           ||||| || |||||||||||||||||||| |  || |||||| | ||||| || || |||
Sbjct: 773 gtctgaataatggtgttgtgccatgggtctgatagatgctgcagaaggttatcaaaaggc 714

                                                                       
Query: 287 cccttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctc 346
           ||||| || ||||| ||||| ||||| | ||| || | ||| |||| ||| |||| ||||
Sbjct: 713 ccctttccagtcacattgtgttgcacaatgaatcctaagaatgccaacattgccaatctc 654

                                   
Query: 347 ccgttggcgagctccttctccttg 370
           || || || |||||||||||||||
Sbjct: 653 ccattagcaagctccttctccttg 630



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 482 gggttcttgatgtcctgccaccgccggatctcgacgtagtggaagaggatgaactc 537
           |||||||||||||||||||| | ||  ||||| || |||||||| | |||||||||
Sbjct: 518 gggttcttgatgtcctgccatctccttatctccacatagtggaataagatgaactc 463
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>gb|AY233205.1| Vitis vinifera chlorophyll a/b-binding protein (Lhca1) mRNA,
           partial cds; nuclear gene for chloroplast product
          Length = 476

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 213/273 (78%)
 Strand = Plus / Minus

                                                                       
Query: 230 tggatgatggtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggcccc 289
           |||||||||||||||||||||||||| |  | |||||||   ||||| || || ||||| 
Sbjct: 273 tggatgatggtgttgtgccatgggtctgagatgtgctgcaagaggttgtcaaatggccct 214

                                                                       
Query: 290 ttcccggtcacgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccg 349
           || || ||||||||||| || || |  ||||||||||| |||| ||| || | |||||||
Sbjct: 213 tttccagtcacgttgtgttgaacaataaaccccaggaatgccaacattgctaatctcccg 154

                                                                       
Query: 350 ttggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaagacg 409
           || || || ||||| ||||||  |||    || || || ||||| ||||||||||| |  
Sbjct: 153 ttagcaagttccttttccttggcctcctcagttggtgcaaagttcagggggttgaaaata 94

                                                                       
Query: 410 ctgccggggtagccgcactcgtggggcgggaggctgtagctcttgaagatggggtcctgg 469
           |  |||||||| ||   ||| | ||| || | ||||||| ||||||| ||||| ||||||
Sbjct: 93  ccaccggggtaacccacctcattgggaggtaagctgtagttcttgaaaatgggatcctgg 34

                                            
Query: 470 ttgacggagcccgggttcttgatgtcctgccac 502
           || ||    || |||||||||||||||||||||
Sbjct: 33  ttcacacttcctgggttcttgatgtcctgccac 1
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>gb|AF359128.1| Pinus sylvestris plus tree E1101 LHC I type IV chlorophyll binding
           protein (LHCA4) gene, partial cds; nuclear gene for
           chloroplast product
          Length = 498

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                     
Query: 350 ttggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaaga 407
           |||||||||||||||||||||  ||| | ||  |||| ||||||||| ||||||||||
Sbjct: 318 ttggcgagctccttctccttggcctccatggatggggagaagttgagagggttgaaga 261
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>gb|AF359127.1| Pinus sylvestris plus tree E635C LHC I type IV chlorophyll binding
           protein (LHCA4) gene, partial cds; nuclear gene for
           chloroplast product
          Length = 521

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                     
Query: 350 ttggcgagctccttctccttgttctcgagggtgggggcgaagttgagggggttgaaga 407
           |||||||||||||||||||||  ||| | ||  |||| ||||||||| ||||||||||
Sbjct: 318 ttggcgagctccttctccttggcctccatggatggggagaagttgagagggttgaaga 261
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>ref|NM_114615.3| Arabidopsis thaliana CAB4; chlorophyll binding AT3G47470 (CAB4)
           mRNA, complete cds
          Length = 1266

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                       
Query: 482 gggttcttgatgtcctgccaccgccggatctcgacgtagtggaagaggatgaactcgatg 541
           |||||||||||||| |||||||| | |||||| ||||| || || |  ||||||||||| 
Sbjct: 751 gggttcttgatgtcttgccaccgtctgatctcaacgtaatgaaacaatatgaactcgatc 692

                
Query: 542 acgaa 546
           |||||
Sbjct: 691 acgaa 687



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 105/132 (79%)
 Strand = Plus / Minus

                                                                       
Query: 239 gtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccggtc 298
           ||||||||||||||||| | || |||||||  ||| ||||| || || || || || |||
Sbjct: 994 gtgttgtgccatgggtcagacaagtgctgcaacagattctcaaatggtccttttccagtc 935

                                                                       
Query: 299 acgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcgagc 358
           || ||||| || ||||  ||||| | ||| |||| ||| ||||  |||||||| || |||
Sbjct: 934 acattgtgttgaaccacaaaccctaagaatgccaacatcgccaacctcccgtttgctagc 875

                       
Query: 359 tccttctccttg 370
           || |||||||||
Sbjct: 874 tctttctccttg 863
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>gb|BT000093.1| Arabidopsis thaliana chlorophyll A-B binding protein 4 precursor
           homolog (At3g47470) mRNA, complete cds
          Length = 891

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                       
Query: 482 gggttcttgatgtcctgccaccgccggatctcgacgtagtggaagaggatgaactcgatg 541
           |||||||||||||| |||||||| | |||||| ||||| || || |  ||||||||||| 
Sbjct: 491 gggttcttgatgtcttgccaccgtctgatctcaacgtaatgaaacaatatgaactcgatc 432

                
Query: 542 acgaa 546
           |||||
Sbjct: 431 acgaa 427



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 105/132 (79%)
 Strand = Plus / Minus

                                                                       
Query: 239 gtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccggtc 298
           ||||||||||||||||| | || |||||||  ||| ||||| || || || || || |||
Sbjct: 734 gtgttgtgccatgggtcagacaagtgctgcaacagattctcaaatggtccttttccagtc 675

                                                                       
Query: 299 acgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcgagc 358
           || ||||| || ||||  ||||| | ||| |||| ||| ||||  |||||||| || |||
Sbjct: 674 acattgtgttgaaccacaaaccctaagaatgccaacatcgccaacctcccgtttgctagc 615

                       
Query: 359 tccttctccttg 370
           || |||||||||
Sbjct: 614 tctttctccttg 603
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>emb|AL132955.1|ATF1P2 Arabidopsis thaliana DNA chromosome 3, BAC clone F1P2
          Length = 101154

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                        
Query: 482  gggttcttgatgtcctgccaccgccggatctcgacgtagtggaagaggatgaactcgatg 541
            |||||||||||||| |||||||| | |||||| ||||| || || |  ||||||||||| 
Sbjct: 7325 gggttcttgatgtcttgccaccgtctgatctcaacgtaatgaaacaatatgaactcgatc 7384

                 
Query: 542  acgaa 546
            |||||
Sbjct: 7385 acgaa 7389
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>gb|AY093080.1| Arabidopsis thaliana chlorophyll A-B binding protein 4 precursor
           homolog (At3g47470) mRNA, complete cds
          Length = 1055

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                       
Query: 482 gggttcttgatgtcctgccaccgccggatctcgacgtagtggaagaggatgaactcgatg 541
           |||||||||||||| |||||||| | |||||| ||||| || || |  ||||||||||| 
Sbjct: 591 gggttcttgatgtcttgccaccgtctgatctcaacgtaatgaaacaatatgaactcgatc 532

                
Query: 542 acgaa 546
           |||||
Sbjct: 531 acgaa 527



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 105/132 (79%)
 Strand = Plus / Minus

                                                                       
Query: 239 gtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccggtc 298
           ||||||||||||||||| | || |||||||  ||| ||||| || || || || || |||
Sbjct: 834 gtgttgtgccatgggtcagacaagtgctgcaacagattctcaaatggtccttttccagtc 775

                                                                       
Query: 299 acgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcgagc 358
           || ||||| || ||||  ||||| | ||| |||| ||| ||||  |||||||| || |||
Sbjct: 774 acattgtgttgaaccacaaaccctaagaatgccaacatcgccaacctcccgtttgctagc 715

                       
Query: 359 tccttctccttg 370
           || |||||||||
Sbjct: 714 tctttctccttg 703
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>gb|AF325012.2|AF325012 Arabidopsis thaliana AT3g47470 (AT3g47470/F1P2_20) mRNA, complete
           cds
          Length = 715

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                       
Query: 482 gggttcttgatgtcctgccaccgccggatctcgacgtagtggaagaggatgaactcgatg 541
           |||||||||||||| |||||||| | |||||| ||||| || || |  ||||||||||| 
Sbjct: 208 gggttcttgatgtcttgccaccgtctgatctcaacgtaatgaaacaatatgaactcgatc 149

                
Query: 542 acgaa 546
           |||||
Sbjct: 148 acgaa 144



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 105/132 (79%)
 Strand = Plus / Minus

                                                                       
Query: 239 gtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccggtc 298
           ||||||||||||||||| | || |||||||  ||| ||||| || || || || || |||
Sbjct: 451 gtgttgtgccatgggtcagacaagtgctgcaacagattctcaaatggtccttttccagtc 392

                                                                       
Query: 299 acgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcgagc 358
           || ||||| || ||||  ||||| | ||| |||| ||| ||||  |||||||| || |||
Sbjct: 391 acattgtgttgaaccacaaaccctaagaatgccaacatcgccaacctcccgtttgctagc 332

                       
Query: 359 tccttctccttg 370
           || |||||||||
Sbjct: 331 tctttctccttg 320
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>emb|BX826089.1|CNS0A6C9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL84ZA10 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 973

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                       
Query: 482 gggttcttgatgtcctgccaccgccggatctcgacgtagtggaagaggatgaactcgatg 541
           |||||||||||||| |||||||| | |||||| ||||| || || |  ||||||||||| 
Sbjct: 581 gggttcttgatgtcttgccaccgtctgatctcaacgtaatgaaacaatatgaactcgatc 522

                
Query: 542 acgaa 546
           |||||
Sbjct: 521 acgaa 517



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 105/132 (79%)
 Strand = Plus / Minus

                                                                       
Query: 239 gtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccggtc 298
           ||||||||||||||||| | || |||||||  ||| ||||| || || || || || |||
Sbjct: 824 gtgttgtgccatgggtcagacaagtgctgcaacagattctcaaatggtccttttccagtc 765

                                                                       
Query: 299 acgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcgagc 358
           || ||||| || ||||  ||||| | ||| |||| ||| ||||  |||||||| || |||
Sbjct: 764 acattgtgttgaaccacaaaccctaagaatgccaacatcgccaacctcccgtttgctagc 705

                       
Query: 359 tccttctccttg 370
           || |||||||||
Sbjct: 704 tctttctccttg 693
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>emb|BX825536.1|CNS0A6EC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL42ZH07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1035

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                       
Query: 482 gggttcttgatgtcctgccaccgccggatctcgacgtagtggaagaggatgaactcgatg 541
           |||||||||||||| |||||||| | |||||| ||||| || || |  ||||||||||| 
Sbjct: 578 gggttcttgatgtcttgccaccgtctgatctcaacgtaatgaaacaatatgaactcgatc 519

                
Query: 542 acgaa 546
           |||||
Sbjct: 518 acgaa 514
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>emb|BX823268.1|CNS0A6MH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS18ZF07 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1046

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                       
Query: 482 gggttcttgatgtcctgccaccgccggatctcgacgtagtggaagaggatgaactcgatg 541
           |||||||||||||| |||||||| | |||||| ||||| || || |  ||||||||||| 
Sbjct: 565 gggttcttgatgtcttgccaccgtctgatctcaacgtaatgaaacaatatgaactcgatc 506

                
Query: 542 acgaa 546
           |||||
Sbjct: 505 acgaa 501



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 105/132 (79%)
 Strand = Plus / Minus

                                                                       
Query: 239 gtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccggtc 298
           ||||||||||||||||| | || |||||||  ||| ||||| || || || || || |||
Sbjct: 808 gtgttgtgccatgggtcagacaagtgctgcaacagattctcaaatggtccttttccagtc 749

                                                                       
Query: 299 acgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcgagc 358
           || ||||| || ||||  ||||| | ||| |||| ||| ||||  |||||||| || |||
Sbjct: 748 acattgtgttgaaccacaaaccctaagaatgccaacatcgccaacctcccgtttgctagc 689

                       
Query: 359 tccttctccttg 370
           || |||||||||
Sbjct: 688 tctttctccttg 677
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>gb|AY086470.1| Arabidopsis thaliana clone 2531 mRNA, complete sequence
          Length = 1267

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                       
Query: 482 gggttcttgatgtcctgccaccgccggatctcgacgtagtggaagaggatgaactcgatg 541
           |||||||||||||| |||||||| | |||||| ||||| || || |  ||||||||||| 
Sbjct: 752 gggttcttgatgtcttgccaccgtctgatctcaacgtaatgaaacaatatgaactcgatc 693

                
Query: 542 acgaa 546
           |||||
Sbjct: 692 acgaa 688



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 105/132 (79%)
 Strand = Plus / Minus

                                                                       
Query: 239 gtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccggtc 298
           ||||||||||||||||| | || |||||||  ||| ||||| || || || || || |||
Sbjct: 995 gtgttgtgccatgggtcagacaagtgctgcaacagattctcaaatggtccttttccagtc 936

                                                                       
Query: 299 acgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcgagc 358
           || ||||| || ||||  ||||| | ||| |||| ||| ||||  |||||||| || |||
Sbjct: 935 acattgtgttgaaccacaaaccctaagaatgccaacatcgccaacctcccgtttgctagc 876

                       
Query: 359 tccttctccttg 370
           || |||||||||
Sbjct: 875 tctttctccttg 864
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>gb|M63931.1|ATHCABM Arabidopsis thaliana light-harvesting chlorophyll a/b-binding
           protein (Cab4) mRNA, complete cds
          Length = 1050

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                       
Query: 482 gggttcttgatgtcctgccaccgccggatctcgacgtagtggaagaggatgaactcgatg 541
           |||||||||||||| |||||||| | |||||| ||||| || || |  ||||||||||| 
Sbjct: 561 gggttcttgatgtcttgccaccgtctgatctcaacgtaatgaaacaatatgaactcgatc 502

                
Query: 542 acgaa 546
           |||||
Sbjct: 501 acgaa 497



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 105/132 (79%)
 Strand = Plus / Minus

                                                                       
Query: 239 gtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccggtc 298
           ||||||||||||||||| | || |||||||  ||| ||||| || || || || || |||
Sbjct: 804 gtgttgtgccatgggtcagacaagtgctgcaacagattctcaaatggtccttttccagtc 745

                                                                       
Query: 299 acgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcgagc 358
           || ||||| || ||||  ||||| | ||| |||| ||| ||||  |||||||| || |||
Sbjct: 744 acattgtgttgaaccacaaaccctaagaatgccaacatcgccaacctcccgtttgctagc 685

                       
Query: 359 tccttctccttg 370
           || |||||||||
Sbjct: 684 tctttctccttg 673
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>gb|BT015429.1| Arabidopsis thaliana At3g47470 mRNA sequence
          Length = 405

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 105/132 (79%)
 Strand = Plus / Minus

                                                                       
Query: 239 gtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccggtc 298
           ||||||||||||||||| | || |||||||  ||| ||||| || || || || || |||
Sbjct: 383 gtgttgtgccatgggtcagacaagtgctgcaacagattctcaaatggtccttttccagtc 324

                                                                       
Query: 299 acgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcgagc 358
           || ||||| || ||||  ||||| | ||| |||| ||| ||||  |||||||| || |||
Sbjct: 323 acattgtgttgaaccacaaaccctaagaatgccaacatcgccaacctcccgtttgctagc 264

                       
Query: 359 tccttctccttg 370
           || |||||||||
Sbjct: 263 tctttctccttg 252



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 482 gggttcttgatgtcctgccaccgccggatctcgacgtagtggaagaggatgaactcgat 540
           |||||||||||||| |||||||| | |||||| ||||| || || |  |||||||||||
Sbjct: 140 gggttcttgatgtcttgccaccgtctgatctcaacgtaatgaaacaatatgaactcgat 82
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>emb|BX824775.1|CNS0A6UB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH71ZB01 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 508

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 105/132 (79%)
 Strand = Plus / Minus

                                                                       
Query: 239 gtgttgtgccatgggtcggccaggtgctgctgcaggttctcgaacggccccttcccggtc 298
           ||||||||||||||||| | || |||||||  ||| ||||| || || || || || |||
Sbjct: 297 gtgttgtgccatgggtcagacaagtgctgcaacagattctcaaatggtccttttccagtc 238

                                                                       
Query: 299 acgttgtgctgcaccaggaaccccaggaacgccagcatggccagtctcccgttggcgagc 358
           || ||||| || ||||  ||||| | ||| |||| ||| ||||  |||||||| || |||
Sbjct: 237 acattgtgttgaaccacaaaccctaagaatgccaacatcgccaacctcccgtttgctagc 178

                       
Query: 359 tccttctccttg 370
           || |||||||||
Sbjct: 177 tctttctccttg 166



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 482 gggttcttgatgtcctgccaccgccggatctcgacgta 519
           |||||||||||||| |||||||| | |||||| |||||
Sbjct: 54  gggttcttgatgtcttgccaccgtctgatctcaacgta 17
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>gb|AY109341.1| Zea mays CL4601_3 mRNA sequence
          Length = 1460

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 226 ggtctggatgatggtgttgtgcca 249
           ||||||||||||||||||||||||
Sbjct: 280 ggtctggatgatggtgttgtgcca 303
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>gb|AC019013.2|AC019013 Genomic Sequence For Arabidopsis thaliana, Clone T5E15, Chromosome V,
             complete sequence
          Length = 114056

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 122   cctactcctccacactttgtaca 144
             |||||||||||||||||||||||
Sbjct: 37526 cctactcctccacactttgtaca 37504
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>gb|AC007852.9| Drosophila melanogaster clone BACR33A10, complete sequence
          Length = 186333

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 116   ctgccacctactcctccacac 136
             |||||||||||||||||||||
Sbjct: 11776 ctgccacctactcctccacac 11756
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>gb|AC007588.5| Drosophila melanogaster clone BACR30O03, complete sequence
          Length = 165177

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 116   ctgccacctactcctccacac 136
             |||||||||||||||||||||
Sbjct: 60657 ctgccacctactcctccacac 60677
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>gb|BC036687.1| Homo sapiens cDNA clone IMAGE:5259465
          Length = 3993

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 65   caaggacaaagtttcaccacc 85
            |||||||||||||||||||||
Sbjct: 3765 caaggacaaagtttcaccacc 3785
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>gb|AC159237.2| Mus musculus BAC clone RP24-464G10 from chromosome 12, complete
             sequence
          Length = 222209

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 149   cagcaccccaaaataataatt 169
             |||||||||||||||||||||
Sbjct: 97909 cagcaccccaaaataataatt 97929
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>ref|XM_392275.2| PREDICTED: Apis mellifera similar to ENSANGP00000012777 (LOC408740),
            mRNA
          Length = 1629

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 362  ttctccttgttctcgagggtg 382
            |||||||||||||||||||||
Sbjct: 1022 ttctccttgttctcgagggtg 1002
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>gb|AC090883.1|AC090883 Homo sapiens chromosome 3 clone RP11-117G9 map 3p, complete sequence
          Length = 172400

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 65     caaggacaaagtttcaccacc 85
              |||||||||||||||||||||
Sbjct: 170063 caaggacaaagtttcaccacc 170083
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>gb|AF276663.1|AF276663 Drosophila melanogaster comb (cg) gene, complete cds, alternatively
            spliced
          Length = 9504

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 116  ctgccacctactcctccacac 136
            |||||||||||||||||||||
Sbjct: 4304 ctgccacctactcctccacac 4324
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>gb|AC027125.5| Homo sapiens chromosome 3 clone RP11-584M7 map 3p, complete sequence
          Length = 173842

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 65     caaggacaaagtttcaccacc 85
              |||||||||||||||||||||
Sbjct: 111543 caaggacaaagtttcaccacc 111563
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>dbj|AK027185.1| Homo sapiens cDNA: FLJ23532 fis, clone LNG06911
          Length = 3189

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 65   caaggacaaagtttcaccacc 85
            |||||||||||||||||||||
Sbjct: 2950 caaggacaaagtttcaccacc 2970
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>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 223    gatggtctggatgatggtgtt 243
              |||||||||||||||||||||
Sbjct: 631602 gatggtctggatgatggtgtt 631582
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>gb|AY107739.1| Zea mays PCO089350 mRNA sequence
          Length = 645

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 421 gccgcactcgtggggcgggaggctg 445
           |||||||||||||||| ||||||||
Sbjct: 310 gccgcactcgtggggctggaggctg 286
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>gb|AE003815.4| Drosophila melanogaster chromosome 2R, section 35 of 73 of the complete
             sequence
          Length = 229685

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 116   ctgccacctactcctccacac 136
             |||||||||||||||||||||
Sbjct: 31518 ctgccacctactcctccacac 31538
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>gb|AC127582.4| Mus musculus BAC clone RP24-89J3 from 12, complete sequence
          Length = 217949

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 149  cagcaccccaaaataataatt 169
            |||||||||||||||||||||
Sbjct: 9849 cagcaccccaaaataataatt 9829
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>ref|NM_188089.1| Oryza sativa (japonica cultivar-group), Ozsa8521 predicted mRNA
          Length = 1089

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 219  cggagatggtctggatgatggtgttgtg 246
            ||||||||||||||| ||||| ||||||
Sbjct: 1009 cggagatggtctggaggatggcgttgtg 982
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>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete
              sequence
          Length = 1019846

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 351    tggcgagctccttctccttg 370
              ||||||||||||||||||||
Sbjct: 363820 tggcgagctccttctccttg 363839
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>emb|AL133520.5| Human DNA sequence from clone RP1-101A2 on chromosome 20, complete
             sequence
          Length = 47325

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 304   gtgctgcaccaggaaccccaggaa 327
             |||| |||||||||||||||||||
Sbjct: 32871 gtgcagcaccaggaaccccaggaa 32848
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>ref|XM_567806.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
            (CNK01210) partial mRNA
          Length = 1432

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 351  tggcgagctccttctccttg 370
            ||||||||||||||||||||
Sbjct: 1096 tggcgagctccttctccttg 1077
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>gb|AC024608.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-333I24, complete
              sequence
          Length = 215829

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 143    catcctcagcaccccaaaat 162
              ||||||||||||||||||||
Sbjct: 132164 catcctcagcaccccaaaat 132183
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>ref|XM_535195.2| PREDICTED: Canis familiaris similar to inter-alpha globulin
           inhibitor H2 polypeptide (LOC478011), mRNA
          Length = 2941

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 225 tggtctggatgatggtgttg 244
           ||||||||||||||||||||
Sbjct: 377 tggtctggatgatggtgttg 358
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 226    ggtctggatgatggtgttgt 245
              ||||||||||||||||||||
Sbjct: 172999 ggtctggatgatggtgttgt 172980
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>gb|AF448525.1| Mytilus galloprovincialis precollagen-P mRNA, complete cds
          Length = 2781

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 310  caccaggaaccccaggaacgccag 333
            ||||||||||||||||||| ||||
Sbjct: 1066 caccaggaaccccaggaacaccag 1089
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>emb|BX469902.7| Zebrafish DNA sequence from clone CH211-277G23 in linkage group 9,
             complete sequence
          Length = 179135

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 152   caccccaaaataataattca 171
             ||||||||||||||||||||
Sbjct: 16903 caccccaaaataataattca 16922
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>dbj|AB189167.1| Oryza sativa (japonica cultivar-group) OsIDHa mRNA for NAD-dependent
            isocitrate dehydrogenase a, complete cds
          Length = 1424

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 219  cggagatggtctggatgatggtgttgtg 246
            ||||||||||||||| ||||| ||||||
Sbjct: 1135 cggagatggtctggaggatggcgttgtg 1108
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>gb|S68728.1| LHC Ib-21=light-harvesting complex I [Hordeum vulgare=barley,
           Prato, mRNA Chloroplast, 878 nt]
          Length = 878

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 316 gaaccccaggaacgccagcatggccagtctcccgtt 351
           |||||||| |||||||||||| ||||| | ||||||
Sbjct: 543 gaaccccacgaacgccagcatcgccagccgcccgtt 508
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 254    tcggccaggtgctgctgcag 273
              ||||||||||||||||||||
Sbjct: 665703 tcggccaggtgctgctgcag 665722
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 219     cggagatggtctggatgatggtgttgtg 246
               ||||||||||||||| ||||| ||||||
Sbjct: 9668714 cggagatggtctggaggatggcgttgtg 9668687
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>gb|AC097525.3| Homo sapiens BAC clone RP11-627E8 from 2, complete sequence
          Length = 55514

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    catgggtgatattacaagta 34
             ||||||||||||||||||||
Sbjct: 11077 catgggtgatattacaagta 11096
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>dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0038F12
          Length = 190014

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 219    cggagatggtctggatgatggtgttgtg 246
              ||||||||||||||| ||||| ||||||
Sbjct: 106717 cggagatggtctggaggatggcgttgtg 106690
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 218     ccggagatggtctggatgatggtg 241
               ||||||||||||||||||| ||||
Sbjct: 5018847 ccggagatggtctggatgagggtg 5018824
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>dbj|AB122118.1| Chlamydomonas reinhardtii LhcI-5 gene for light-harvesting
            chlorophyll-a/b protein of photosystem I, complete cds
          Length = 1886

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 453  tgaagatggggtcctggttgacggagcc 480
            ||||||||||||||||||  ||||||||
Sbjct: 1085 tgaagatggggtcctggtccacggagcc 1058
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>gb|AF218305.1|AF218305 Hordeum vulgare chlorophyll a/b binding protein precursor (lhca1)
           mRNA, complete cds; nuclear gene for chloroplast product
          Length = 784

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 316 gaaccccaggaacgccagcatggccagtctcccgtt 351
           |||||||| |||||||||||| ||||| | ||||||
Sbjct: 661 gaaccccacgaacgccagcatcgccagccgcccgtt 626
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>dbj|AK059596.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-D11, full
            insert sequence
          Length = 1522

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 219  cggagatggtctggatgatggtgttgtg 246
            ||||||||||||||| ||||| ||||||
Sbjct: 1149 cggagatggtctggaggatggcgttgtg 1122
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>gb|AF082100.1|AF082100 Streptomyces sp. MA6548 FK506 peptide synthetase (fkbP), FK506
            oxidase (fkbO), and FK506 polyketide synthase (fkbB)
            genes, complete cds
          Length = 28732

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 252  ggtcggccaggtgctgctgcaggt 275
            ||||| ||||||||||||||||||
Sbjct: 3454 ggtcgtccaggtgctgctgcaggt 3431


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,856,862
Number of Sequences: 3902068
Number of extensions: 4856862
Number of successful extensions: 90558
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90202
Number of HSP's gapped (non-prelim): 347
length of query: 558
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 535
effective length of database: 17,143,297,704
effective search space: 9171664271640
effective search space used: 9171664271640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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