ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal18j13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YVTA_BACSU (Q9R9I1) Probable serine protease yvtA (EC 3.4.21.-) 32 2.1
2GR61A_DROME (Q9W0M2) Putative gustatory receptor 61a 31 2.8
3Y161_RICPR (Q9ZE02) Hypothetical zinc metalloprotease RP161 (EC ... 31 3.6
4DEGP_SALTY (P26982) Protease do precursor (EC 3.4.21.-) 31 3.6
5DEGP_ECOLI (P0C0V0) Protease do precursor (EC 3.4.21.-) 31 3.6
6DEGP_ECO57 (P0C0V1) Protease do precursor (EC 3.4.21.-) 31 3.6
7Y1964_AQUAE (O67776) Hypothetical zinc metalloprotease aq_1964 (... 30 6.2
8HTOA_HAEIN (P45129) Probable periplasmic serine protease do/hhoA... 30 6.2
9DEGP_CHLTR (P18584) Probable serine protease do-like precursor (... 30 8.1
10DEGP_CHLMU (Q9PL97) Probable serine protease do-like precursor (... 30 8.1

>YVTA_BACSU (Q9R9I1) Probable serine protease yvtA (EC 3.4.21.-)|
          Length = 458

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = -2

Query: 651 SNAEKIGIREGDVIESFNGKYVSTTIELEQML 556
           S AEK GI+  DVI   NGK V ++ ++ Q+L
Sbjct: 391 SPAEKAGIKSEDVIVKLNGKDVESSADIRQIL 422



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>GR61A_DROME (Q9W0M2) Putative gustatory receptor 61a|
          Length = 436

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +3

Query: 84  QLCTNFSTKLVAISNLAYRFCSARKYILCALS*AASTVQRHPQFKVFVW 230
           +LC   S    ++SN+ +  C+   Y++C  + A  T  RHP   V+ W
Sbjct: 290 RLCELASLVEASMSNIVFVSCANNVYVICNQALAIFTKLRHPINYVYFW 338



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>Y161_RICPR (Q9ZE02) Hypothetical zinc metalloprotease RP161 (EC 3.4.24.-)|
          Length = 359

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = -2

Query: 651 SNAEKIGIREGDVIESFNGKYVSTTIELEQMLI 553
           S AE+ G++EGD I   N KYV   +++++ ++
Sbjct: 140 SPAERAGLKEGDKIVKVNNKYVKDFVDVQKEIL 172



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>DEGP_SALTY (P26982) Protease do precursor (EC 3.4.21.-)|
          Length = 475

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = -2

Query: 651 SNAEKIGIREGDVIESFNGKYVST 580
           S+A K GI+ GDVI S NGK +S+
Sbjct: 324 SSAAKAGIKAGDVITSLNGKPISS 347



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>DEGP_ECOLI (P0C0V0) Protease do precursor (EC 3.4.21.-)|
          Length = 474

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = -2

Query: 651 SNAEKIGIREGDVIESFNGKYVST 580
           S+A K GI+ GDVI S NGK +S+
Sbjct: 323 SSAAKAGIKAGDVITSLNGKPISS 346



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>DEGP_ECO57 (P0C0V1) Protease do precursor (EC 3.4.21.-)|
          Length = 474

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = -2

Query: 651 SNAEKIGIREGDVIESFNGKYVST 580
           S+A K GI+ GDVI S NGK +S+
Sbjct: 323 SSAAKAGIKAGDVITSLNGKPISS 346



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>Y1964_AQUAE (O67776) Hypothetical zinc metalloprotease aq_1964 (EC 3.4.24.-)|
          Length = 429

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = -2

Query: 651 SNAEKIGIREGDVIESFNGKYVSTTIEL 568
           S A+++GI+ GD+I   NGK ++T  EL
Sbjct: 218 SPADQVGIKPGDLILEVNGKKINTWYEL 245



 Score = 29.6 bits (65), Expect = 8.1
 Identities = 17/38 (44%), Positives = 21/38 (55%)
 Frame = -2

Query: 651 SNAEKIGIREGDVIESFNGKYVSTTIELEQMLIDICWD 538
           S A+KIGI+ GD I   NG  V T  +L   LI +  D
Sbjct: 133 SIAQKIGIKPGDKIIKINGYEVRTWEDLRDALIRLSLD 170



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>HTOA_HAEIN (P45129) Probable periplasmic serine protease do/hhoA-like|
           precursor (EC 3.4.21.-)
          Length = 466

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = -2

Query: 651 SNAEKIGIREGDVIESFNGKYVSTTIEL 568
           S AEK G++ GD+I + NG+ +S+  E+
Sbjct: 313 SAAEKAGLKAGDIITAMNGQKISSFAEI 340



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>DEGP_CHLTR (P18584) Probable serine protease do-like precursor (EC 3.4.21.-)|
           (59 kDa immunogenic protein) (SK59)
          Length = 497

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -2

Query: 651 SNAEKIGIREGDVIESFNGKYVSTTIELEQML 556
           S AEK G+R+ DVI ++NGK V +   L   +
Sbjct: 334 SPAEKAGLRQEDVIVAYNGKEVESLSALRNAI 365



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>DEGP_CHLMU (Q9PL97) Probable serine protease do-like precursor (EC 3.4.21.-)|
          Length = 497

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -2

Query: 651 SNAEKIGIREGDVIESFNGKYVSTTIELEQML 556
           S AEK G+R+ DVI ++NGK V +   L   +
Sbjct: 334 SPAEKAGLRQEDVIVAYNGKEVESLSALRNAI 365


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,052,274
Number of Sequences: 219361
Number of extensions: 1720772
Number of successful extensions: 3984
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3983
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6143359464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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