ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal18j09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC123517.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBb0074K09, complete sequence Length = 135363 Score = 159 bits (80), Expect = 1e-35 Identities = 116/128 (90%) Strand = Plus / Plus Query: 166 tctgcaggttagttgctaaatacaggccaccaatgccagttttagcagttgtgttcccac 225 |||||||||||||||| || |||| ||||||||||||||| || || ||||| ||||||| Sbjct: 42780 tctgcaggttagttgccaagtacaagccaccaatgccagtgttggccgttgtcttcccac 42839 Query: 226 gcgagggctctgatccatcaaagtggcgttcttatggcacaacgcaggtaagtaacatgc 285 | ||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||| Sbjct: 42840 gtgagggctctgatccaacaaagtggcgttcttacggcacaactcaggtaagtaacatgt 42899 Query: 286 atatctat 293 |||||||| Sbjct: 42900 atatctat 42907 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Plus Query: 15 taggttcgttctgcaatgaaagtaaaagctgctgcgattgttgtgttcaccttctcaggg 74 |||||||| |||||||||| |||||||||||||| || ||||||||||| |||||||| Sbjct: 42641 taggttcgcactgcaatgaaggtaaaagctgctgcaatcgttgtgttcactttctcagga 42700 Query: 75 agagctgccaggt 87 ||||||||||||| Sbjct: 42701 agagctgccaggt 42713 Score = 75.8 bits (38), Expect = 2e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 351 caggcgaggcaatgtttttctgtgagaggtgtgtaccctttgatggggagtactgacgag 410 ||||| |||||||||||| ||| |||||||| ||||||||||||| ||||||||| ||| Sbjct: 42990 caggcaaggcaatgttttgctgcaagaggtgtctaccctttgatggcgagtactgaggag 43049 Query: 411 gtatgt 416 |||||| Sbjct: 43050 gtatgt 43055
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 159 bits (80), Expect = 1e-35 Identities = 116/128 (90%) Strand = Plus / Plus Query: 166 tctgcaggttagttgctaaatacaggccaccaatgccagttttagcagttgtgttcccac 225 |||||||||||||||| || |||| ||||||||||||||| || || ||||| ||||||| Sbjct: 5986697 tctgcaggttagttgccaagtacaagccaccaatgccagtgttggccgttgtcttcccac 5986756 Query: 226 gcgagggctctgatccatcaaagtggcgttcttatggcacaacgcaggtaagtaacatgc 285 | ||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||| Sbjct: 5986757 gtgagggctctgatccaacaaagtggcgttcttacggcacaactcaggtaagtaacatgt 5986816 Query: 286 atatctat 293 |||||||| Sbjct: 5986817 atatctat 5986824 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Plus Query: 15 taggttcgttctgcaatgaaagtaaaagctgctgcgattgttgtgttcaccttctcaggg 74 |||||||| |||||||||| |||||||||||||| || ||||||||||| |||||||| Sbjct: 5986558 taggttcgcactgcaatgaaggtaaaagctgctgcaatcgttgtgttcactttctcagga 5986617 Query: 75 agagctgccaggt 87 ||||||||||||| Sbjct: 5986618 agagctgccaggt 5986630 Score = 75.8 bits (38), Expect = 2e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 351 caggcgaggcaatgtttttctgtgagaggtgtgtaccctttgatggggagtactgacgag 410 ||||| |||||||||||| ||| |||||||| ||||||||||||| ||||||||| ||| Sbjct: 5986907 caggcaaggcaatgttttgctgcaagaggtgtctaccctttgatggcgagtactgaggag 5986966 Query: 411 gtatgt 416 |||||| Sbjct: 5986967 gtatgt 5986972 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 473 aatgtactccctcggttcctaaatataag 501 ||||||||||||| ||||| ||||||||| Sbjct: 24733957 aatgtactccctccgttccaaaatataag 24733929 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 474 atgtactccctcggttcctaaatat 498 |||||||||||| |||||||||||| Sbjct: 18941124 atgtactccctccgttcctaaatat 18941148 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 473 aatgtactccctcggttcctaaatataag 501 ||||||||||||| || |||||||||||| Sbjct: 16450786 aatgtactccctctgtccctaaatataag 16450758 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 480 tccctcggttcctaaatataa 500 ||||||||||||||||||||| Sbjct: 2588183 tccctcggttcctaaatataa 2588163 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 474 atgtactccctcggttcctaaatataag 501 |||||||||||| || |||||||||||| Sbjct: 7459022 atgtactccctccgtccctaaatataag 7459049 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataa 500 ||||||||| |||||||||||||| Sbjct: 6469178 tactccctctgttcctaaatataa 6469201
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 159 bits (80), Expect = 1e-35 Identities = 116/128 (90%) Strand = Plus / Plus Query: 166 tctgcaggttagttgctaaatacaggccaccaatgccagttttagcagttgtgttcccac 225 |||||||||||||||| || |||| ||||||||||||||| || || ||||| ||||||| Sbjct: 6053174 tctgcaggttagttgccaagtacaagccaccaatgccagtgttggccgttgtcttcccac 6053233 Query: 226 gcgagggctctgatccatcaaagtggcgttcttatggcacaacgcaggtaagtaacatgc 285 | ||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||| Sbjct: 6053234 gtgagggctctgatccaacaaagtggcgttcttacggcacaactcaggtaagtaacatgt 6053293 Query: 286 atatctat 293 |||||||| Sbjct: 6053294 atatctat 6053301 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Plus Query: 15 taggttcgttctgcaatgaaagtaaaagctgctgcgattgttgtgttcaccttctcaggg 74 |||||||| |||||||||| |||||||||||||| || ||||||||||| |||||||| Sbjct: 6053035 taggttcgcactgcaatgaaggtaaaagctgctgcaatcgttgtgttcactttctcagga 6053094 Query: 75 agagctgccaggt 87 ||||||||||||| Sbjct: 6053095 agagctgccaggt 6053107 Score = 75.8 bits (38), Expect = 2e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 351 caggcgaggcaatgtttttctgtgagaggtgtgtaccctttgatggggagtactgacgag 410 ||||| |||||||||||| ||| |||||||| ||||||||||||| ||||||||| ||| Sbjct: 6053384 caggcaaggcaatgttttgctgcaagaggtgtctaccctttgatggcgagtactgaggag 6053443 Query: 411 gtatgt 416 |||||| Sbjct: 6053444 gtatgt 6053449 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 473 aatgtactccctcggttcctaaatataag 501 ||||||||||||| ||||| ||||||||| Sbjct: 25045627 aatgtactccctccgttccaaaatataag 25045599 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 474 atgtactccctcggttcctaaatat 498 |||||||||||| |||||||||||| Sbjct: 19099773 atgtactccctccgttcctaaatat 19099797 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 473 aatgtactccctcggttcctaaatataag 501 ||||||||||||| || |||||||||||| Sbjct: 16541790 aatgtactccctctgtccctaaatataag 16541762 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 480 tccctcggttcctaaatataa 500 ||||||||||||||||||||| Sbjct: 2597214 tccctcggttcctaaatataa 2597194 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 474 atgtactccctcggttcctaaatataag 501 |||||||||||| || |||||||||||| Sbjct: 7529108 atgtactccctccgtccctaaatataag 7529135 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataa 500 ||||||||| |||||||||||||| Sbjct: 6535645 tactccctctgttcctaaatataa 6535668
>gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete sequence Length = 102433 Score = 125 bits (63), Expect = 2e-25 Identities = 87/95 (91%) Strand = Plus / Minus Query: 476 gtactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacg 535 ||||| |||| |||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 14654 gtacttcctccgttcctaaatataagtcttttaagcaatttcactaaaggtctacatacg 14595 Query: 536 gagcaaaatgagtgaatctaaactctatagtatgt 570 ||||||||||| |||||||| |||||| ||||||| Sbjct: 14594 gagcaaaatgattgaatctatactctaaagtatgt 14560 Score = 123 bits (62), Expect = 8e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| |||||||||||||||||||||||| |||||||||| |||||||||| || Sbjct: 89143 tactccctccgttcctaaatataagtcttttaagcgatttcactaagggtctacatatgg 89202 Query: 537 agcaaaatgagtgaatctaaactctatagtatgt 570 |||||||||| |||||||| |||||| ||||||| Sbjct: 89203 agcaaaatgattgaatctatactctaaagtatgt 89236 Score = 97.6 bits (49), Expect = 5e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| ||||||||||||||||||||| ||| |||| |||| ||| |||||||||| Sbjct: 81136 tactccctccgttcctaaatataagtctttttagaaattttactaaagggctacatacgg 81195 Query: 537 agcaaaatgagtgaatctaaactctatagtatg 569 |||||||| | |||||||| ||| || |||||| Sbjct: 81196 agcaaaataaatgaatctatactttaaagtatg 81228 Score = 83.8 bits (42), Expect = 7e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 476 gtactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacg 535 |||||||||| |||||||||||||||||||| |||||||||||||| || ||||||||| Sbjct: 89307 gtactccctccgttcctaaatataagtctttctagagatttcactagtggactacatacg 89248 Query: 536 ga 537 || Sbjct: 89247 ga 89246 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| |||||||||||||||||||| |||||||||||||| || |||||||||| Sbjct: 14490 tactccctccgttcctaaatataagtctttgtagagatttcactagtggactacatacgg 14549 Query: 537 a 537 | Sbjct: 14550 a 14550 Score = 71.9 bits (36), Expect = 3e-09 Identities = 67/76 (88%), Gaps = 1/76 (1%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| ||||||||||||||| | ||| | | ||||||||| || |||||||||| Sbjct: 66767 tactccctccgttcctaaatataagaccttttacaaatttcactataga-ctacatacgg 66709 Query: 537 agcaaaatgagtgaat 552 |||||||||||||||| Sbjct: 66708 agcaaaatgagtgaat 66693 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 492 taaatataagtcttttaagagatttcactagaggtctacatacggagcaaaatgagtgaa 551 ||||||||||| |||| |||||||| |||||| || ||||||||| |||||||||||| Sbjct: 83613 taaatataagttttttttaagatttcattagaggactgcatacggagtaaaatgagtgaa 83554 Query: 552 tctaaactcta 562 |||| |||||| Sbjct: 83553 tctacactcta 83543 Score = 67.9 bits (34), Expect = 4e-08 Identities = 56/62 (90%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactaga-ggtctacatacg 535 |||| |||| |||||||||||||||||||||||||| |||||||| | || ||||||||| Sbjct: 81300 tacttcctccgttcctaaatataagtcttttaagaggtttcactaaatggactacatacg 81241 Query: 536 ga 537 || Sbjct: 81240 ga 81239 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 476 gtactccctcggttcctaaatataagtcttttaagagatttc 517 |||||| ||| ||||||||||||||||||||| ||||||||| Sbjct: 83464 gtactctctccgttcctaaatataagtctttttagagatttc 83505 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcacta 521 ||||||||| ||||||||||||||| | ||| |||||| |||||| Sbjct: 66606 tactccctccgttcctaaatataagaccttttagagatctcacta 66650
>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete sequence Length = 101158 Score = 123 bits (62), Expect = 8e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| |||||||||||||||||||||||| |||||||||| ||||||||| ||| Sbjct: 73866 tactccctccgttcctaaatataagtcttttaagcgatttcactaagggtctacattcgg 73925 Query: 537 agcaaaatgagtgaatctaaactctatagtatgt 570 |||||||||| |||||||| |||||| ||||||| Sbjct: 73926 agcaaaatgattgaatctatactctaaagtatgt 73959 Score = 97.6 bits (49), Expect = 5e-17 Identities = 70/77 (90%) Strand = Plus / Plus Query: 476 gtactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacg 535 |||| ||||| ||||||||||||||||||||| ||| |||||| |||||| ||||||||| Sbjct: 71690 gtaccccctccgttcctaaatataagtctttttagacatttcaatagaggactacatacg 71749 Query: 536 gagcaaaatgagtgaat 552 |||||||||||||||| Sbjct: 71750 aagcaaaatgagtgaat 71766 Score = 83.8 bits (42), Expect = 7e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 476 gtactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacg 535 |||||||||| |||||||||||||||||||| |||||||||||||| || ||||||||| Sbjct: 90895 gtactccctccgttcctaaatataagtctttgtagagatttcactagtggactacatacg 90836 Query: 536 ga 537 || Sbjct: 90835 ga 90834 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| |||||||||||||||||||| ||||||||||||| | |||||||||| Sbjct: 71854 tactccctccgttcctaaatataagtctttctagagatttcactattgaactacatacgg 71795 Query: 537 a 537 | Sbjct: 71794 a 71794
>gb|DQ201147.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome C (PhyC 1a) pseudogene, complete sequence Length = 1112 Score = 123 bits (62), Expect = 8e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| |||||||||||||||||||||||| |||||||||| ||||||||| ||| Sbjct: 817 tactccctccgttcctaaatataagtcttttaagcgatttcactaagggtctacattcgg 876 Query: 537 agcaaaatgagtgaatctaaactctatagtatgt 570 |||||||||| |||||||| |||||| ||||||| Sbjct: 877 agcaaaatgattgaatctatactctaaagtatgt 910
>dbj|AK101789.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033065I20, full insert sequence Length = 1878 Score = 119 bits (60), Expect = 1e-23 Identities = 93/104 (89%) Strand = Plus / Plus Query: 170 caggttagttgctaaatacaggccaccaatgccagttttagcagttgtgttcccacgcga 229 |||||||||||| || |||| ||||||||||||||| || || ||||| |||||||| || Sbjct: 1376 caggttagttgccaagtacaagccaccaatgccagtgttggccgttgtcttcccacgtga 1435 Query: 230 gggctctgatccatcaaagtggcgttcttatggcacaacgcagg 273 ||||||||||||| |||||||||||||||| |||||||| |||| Sbjct: 1436 gggctctgatccaacaaagtggcgttcttacggcacaactcagg 1479 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 25 ctgcaatgaaagtaaaagctgctgcgattgttgtgttcaccttctcagggagagctgcca 84 |||||||||| |||||||||||||| || ||||||||||| |||||||| |||||||||| Sbjct: 1318 ctgcaatgaaggtaaaagctgctgcaatcgttgtgttcactttctcaggaagagctgcca 1377 Query: 85 ggt 87 ||| Sbjct: 1378 ggt 1380 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 351 caggcgaggcaatgtttttctgtgagaggtgtgtaccctttgatggggagtactgacgag 410 ||||| |||||||||||| ||| |||||||| ||||||||||||| ||||||||| ||| Sbjct: 1476 caggcaaggcaatgttttgctgcaagaggtgtctaccctttgatggcgagtactgaggag 1535 Query: 411 g 411 | Sbjct: 1536 g 1536
>dbj|AK060466.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-C12, full insert sequence Length = 1723 Score = 119 bits (60), Expect = 1e-23 Identities = 93/104 (89%) Strand = Plus / Plus Query: 170 caggttagttgctaaatacaggccaccaatgccagttttagcagttgtgttcccacgcga 229 |||||||||||| || |||| ||||||||||||||| || || ||||| |||||||| || Sbjct: 1127 caggttagttgccaagtacaagccaccaatgccagtgttggccgttgtcttcccacgtga 1186 Query: 230 gggctctgatccatcaaagtggcgttcttatggcacaacgcagg 273 ||||||||||||| |||||||||||||||| |||||||| |||| Sbjct: 1187 gggctctgatccaacaaagtggcgttcttacggcacaactcagg 1230 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 25 ctgcaatgaaagtaaaagctgctgcgattgttgtgttcaccttctcagggagagctgcca 84 |||||||||| |||||||||||||| || ||||||||||| |||||||| |||||||||| Sbjct: 1069 ctgcaatgaaggtaaaagctgctgcaatcgttgtgttcactttctcaggaagagctgcca 1128 Query: 85 ggt 87 ||| Sbjct: 1129 ggt 1131 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 351 caggcgaggcaatgtttttctgtgagaggtgtgtaccctttgatggggagtactgacgag 410 ||||| |||||||||||| ||| |||||||| ||||||||||||| ||||||||| ||| Sbjct: 1227 caggcaaggcaatgttttgctgcaagaggtgtctaccctttgatggcgagtactgaggag 1286 Query: 411 g 411 | Sbjct: 1287 g 1287
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence Length = 114996 Score = 117 bits (59), Expect = 5e-23 Identities = 86/95 (90%) Strand = Plus / Plus Query: 476 gtactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacg 535 |||||||||| |||||||||||||||||||||||| |||||||||| || ||||||| Sbjct: 93728 gtactccctccgttcctaaatataagtcttttaagcgatttcactaagggattacataca 93787 Query: 536 gagcaaaatgagtgaatctaaactctatagtatgt 570 |||||||||||||||||||| |||||| ||||||| Sbjct: 93788 gagcaaaatgagtgaatctacactctaaagtatgt 93822 Score = 95.6 bits (48), Expect = 2e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 487 gttcctaaatataagtcttttaagagatttcactagaggtctacatacggagcaaaatga 546 |||||||||||||||||||||||| |||||||||| | ||||||||||| |||||||||| Sbjct: 67795 gttcctaaatataagtcttttaagcgatttcactatatgtctacatacgaagcaaaatga 67854 Query: 547 gtgaatctaaactcta 562 ||||| || |||||| Sbjct: 67855 ttgaatgtacactcta 67870 Score = 85.7 bits (43), Expect = 2e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| || |||||||||||||||||||| | |||| |||||| ||| |||||||| Sbjct: 55558 tactccctccgtacctaaatataagtcttttaaaatattttactagatgtccacatacgg 55617 Query: 537 agcaaaatgagtgaatcta 555 || ||||||| |||||||| Sbjct: 55618 agtaaaatgaatgaatcta 55636 Score = 83.8 bits (42), Expect = 7e-13 Identities = 67/74 (90%), Gaps = 1/74 (1%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 |||||| || ||||||||||||||||||||| ||||||| |||||||| |||||||||| Sbjct: 4733 tactccatccgttcctaaatataagtctttttagagattctactagagg-ctacatacgg 4791 Query: 537 agcaaaatgagtga 550 || ||||||||||| Sbjct: 4792 agaaaaatgagtga 4805 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactag 522 ||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 67948 tactccctccgttcctaaatataagtctttgtagagatttcactag 67903 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| ||||| |||||||||||||| ||||||| ||||||||| |||| ||||| Sbjct: 93892 tactccctccgttccataatataagtctttttagagattgcactagaggactacgtacgg 93833 Query: 537 a 537 | Sbjct: 93832 a 93832 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttt 506 ||||||||| |||||||||||||||||||| Sbjct: 55721 tactccctccgttcctaaatataagtcttt 55692
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 117 bits (59), Expect = 5e-23 Identities = 74/79 (93%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| ||||||||||||||||||||| ||||||||| ||||| | |||||||||| Sbjct: 76975 tactccctccgttcctaaatataagtctttttagagatttcgctagacgactacatacgg 76916 Query: 537 agcaaaatgagtgaatcta 555 ||||||||||||||||||| Sbjct: 76915 agcaaaatgagtgaatcta 76897 Score = 83.8 bits (42), Expect = 7e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 |||||| || ||| |||||||||||||||||||| ||||| |||| ||||||||||| Sbjct: 29997 tactccatccgtttctaaatataagtcttttaagcgattttactaagaatctacatacgg 29938 Query: 537 agcaaaatgagtgaatctaaactcta 562 |||||||||| |||||||| |||||| Sbjct: 29937 agcaaaatgattgaatctacactcta 29912 Score = 73.8 bits (37), Expect = 7e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 474 atgtactccctcggttcctaaatataagtcttttaagagatttcactag 522 |||||||||||| ||||||||||||||||||||| |||| ||||||||| Sbjct: 76809 atgtactccctccgttcctaaatataagtctttttagaggtttcactag 76857 Score = 54.0 bits (27), Expect = 6e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 474 atgtactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacata 533 |||||||||||| |||| ||||||||| | ||| || ||||||| ||| | ||| ||| Sbjct: 23216 atgtactccctccgttctaaaatataagaccttttagggatttcattaggagactatata 23157 Query: 534 cggagcaaaatgagtgaat 552 ||||||||||||| ||||| Sbjct: 23156 cggagcaaaatgaatgaat 23138 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactag 522 ||||||||| ||| ||||||||||||||||| |||| ||| ||||| Sbjct: 29834 tactccctccgtttctaaatataagtctttttagaggttttactag 29879
>gb|AF250934.1|AF250934 Hordeum vulgare germin B (GerB) gene, complete cds Length = 2798 Score = 117 bits (59), Expect = 5e-23 Identities = 74/79 (93%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| ||| ||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 389 tactccctccgtttctaaatataagtcttttaagatatttcactagaagtctacatacgg 448 Query: 537 agcaaaatgagtgaatcta 555 |||||||||||| |||||| Sbjct: 449 agcaaaatgagttaatcta 467 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 475 tgtactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatac 534 ||||||||||| ||||||||||||||| |||| ||||| |||| ||| | |||||||| Sbjct: 554 tgtactccctccgttcctaaatataagactttaaagaggtttctttagtgaactacatac 495 Query: 535 gga 537 ||| Sbjct: 494 gga 492
>gb|U87149.1|HVU87149 Hordeum vulgare nucellin gene, complete cds Length = 3686 Score = 117 bits (59), Expect = 5e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 476 gtactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacg 535 |||||||||| |||||||||||||||||||||||| |||||||||| || ||||||| Sbjct: 2181 gtactccctccgttcctaaatataagtcttttaagcgatttcactaagggattacataca 2122 Query: 536 gagcaaaatgagtgaatctaaactctatagtatgt 570 |||||||||||||||||||| |||||| ||||||| Sbjct: 2121 gagcaaaatgagtgaatctacactctaaagtatgt 2087 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| ||||| |||||||||||||| ||||||| ||||||||| |||| ||||| Sbjct: 2017 tactccctccgttccataatataagtctttttagagattgcactagaggactacgtacgg 2076 Query: 537 a 537 | Sbjct: 2077 a 2077
>gb|AY643842.1|AY643842S1 Hordeum vulgare subsp. vulgare clone BAC 519K7 hardness locus region Length = 12998 Score = 109 bits (55), Expect = 1e-20 Identities = 73/79 (92%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| |||||||||||||||||||||||| |||||||||| | |||||||||| Sbjct: 12669 tactccctccgttcctaaatataagtcttttaagcgatttcactaagagactacatacgg 12728 Query: 537 agcaaaatgagtgaatcta 555 ||||||||||||||||||| Sbjct: 12729 agcaaaatgagtgaatcta 12747 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| ||||| |||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 12832 tactccctccgttccataatataagtctttttagagatttcactagaggactacatacgg 12773 Query: 537 a 537 | Sbjct: 12772 a 12772
>gb|AY107163.1| Zea mays PCO109318 mRNA sequence Length = 1040 Score = 109 bits (55), Expect = 1e-20 Identities = 91/103 (88%) Strand = Plus / Plus Query: 171 aggttagttgctaaatacaggccaccaatgccagttttagcagttgtgttcccacgcgag 230 ||||||||||| || || |||||| |||||||| ||||||||||| | |||||||| || Sbjct: 440 aggttagttgccaagtataggccaacaatgccaattttagcagttatcttcccacgtgaa 499 Query: 231 ggctctgatccatcaaagtggcgttcttatggcacaacgcagg 273 || || |||||||||||||||||||||||||||||||| |||| Sbjct: 500 ggatccgatccatcaaagtggcgttcttatggcacaacacagg 542 Score = 101 bits (51), Expect = 3e-18 Identities = 66/71 (92%) Strand = Plus / Plus Query: 17 ggttcgttctgcaatgaaagtaaaagctgctgcgattgttgtgttcaccttctcagggag 76 |||| |||||||||| ||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 373 ggttggttctgcaatcaaagtaaaagctgctgccattgttgtgttcacattctcagggag 432 Query: 77 agctgccaggt 87 |||||| |||| Sbjct: 433 agctgcgaggt 443 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 350 acaggcgaggcaatgtttttctgtgagaggtgtgtaccctttgatggggagtactgacga 409 |||||| || |||||||| | |||||||| |||||||||||||||||||||||||| || Sbjct: 538 acaggcaagacaatgtttcgcagtgagaggcgtgtaccctttgatggggagtactgatga 597 Query: 410 gg 411 || Sbjct: 598 gg 599
>gb|DQ324801.1| Hordeum vulgare subsp. vulgare germin B (GerB) gene, promoter and partial cds Length = 1326 Score = 109 bits (55), Expect = 1e-20 Identities = 73/79 (92%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| ||| ||||||||||||||||||||| |||||| |||| |||||||||||| Sbjct: 88 tactccctccgtttctaaatataagtcttttaagatatttcagtagaagtctacatacgg 147 Query: 537 agcaaaatgagtgaatcta 555 |||||||||||| |||||| Sbjct: 148 agcaaaatgagttaatcta 166 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 475 tgtactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatac 534 ||||||||||| ||||||||||||||| |||| ||||| |||| ||| | |||||||| Sbjct: 253 tgtactccctccgttcctaaatataagactttaaagaggtttctttagtgaactacatac 194 Query: 535 gga 537 ||| Sbjct: 193 gga 191
>gb|DQ201157.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai cryptochrome 2 (Cry2) gene, partial cds; and stowaway MITE, complete sequence Length = 2686 Score = 107 bits (54), Expect = 5e-20 Identities = 84/94 (89%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| ||||||||||||||||||||||||| ||||||||||| | ||| |||| Sbjct: 1823 tactccctccgttcctaaatataagtcttttaagatatttcactagatgactaaatacaa 1764 Query: 537 agcaaaatgagtgaatctaaactctatagtatgt 570 |||||||||||||||| || |||||| ||||||| Sbjct: 1763 agcaaaatgagtgaatatacactctaaagtatgt 1730 Score = 50.1 bits (25), Expect = 0.010 Identities = 52/61 (85%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| ||||| ||||||||||||| ||||||| |||| ||| |||||||||| Sbjct: 1660 tactccctccgttccataatataagtctttctagagattctactataggactacatacgg 1719 Query: 537 a 537 | Sbjct: 1720 a 1720
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 107 bits (54), Expect = 5e-20 Identities = 85/94 (90%), Gaps = 1/94 (1%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| ||||||||||| ||||||||||||||||| |||| || |||||||||| Sbjct: 148 tactccctccgttcctaaatacaagtcttttaagagattcaactataga-ctacatacgg 206 Query: 537 agcaaaatgagtgaatctaaactctatagtatgt 570 ||||||||||||||||||| |||||| ||||||| Sbjct: 207 agcaaaatgagtgaatctacactctaaagtatgt 240 Score = 103 bits (52), Expect = 7e-19 Identities = 70/76 (92%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 |||| |||| |||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 194500 tacttcctccgttcctaaatataagtcttttaagcgatttcactagatgtctacatacga 194441 Query: 537 agcaaaatgagtgaat 552 |||||||||| ||||| Sbjct: 194440 agcaaaatgattgaat 194425 Score = 83.8 bits (42), Expect = 7e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| ||||| ||||||||| | ||| || |||||||||| | |||||||||| Sbjct: 1592 tactccctccgttccaaaatataagaccttttaggtatttcactaggagactacatacgg 1651 Query: 537 agcaaaatgagtgaatctaaactcta 562 ||||||||||||||||||| |||||| Sbjct: 1652 agcaaaatgagtgaatctatactcta 1677 Score = 73.8 bits (37), Expect = 7e-10 Identities = 43/45 (95%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcacta 521 ||||||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 309 tactccctccgttcctaaatataagtcttttaagaaatttcacta 265 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcacta 521 ||||||||| ||||||||||||||||||||| | |||| |||||| Sbjct: 136684 tactccctccgttcctaaatataagtctttttaaagatgtcacta 136728 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 527 ctacatacggagcaaaatgagtgaatctaaactcta 562 ||||||||| ||||||||||||||||||| |||||| Sbjct: 217237 ctacatacgaagcaaaatgagtgaatctatactcta 217272 Score = 50.1 bits (25), Expect = 0.010 Identities = 55/64 (85%), Gaps = 2/64 (3%) Strand = Plus / Minus Query: 476 gtactccctcggttcctaaatataagtc--ttttaagagatttcactagaggtctacata 533 |||||| ||| ||||||||||||||||| |||| |||| |||||||| | | ||||||| Sbjct: 143343 gtactcgctccgttcctaaatataagtctttttttagaggtttcactacaagactacata 143284 Query: 534 cgga 537 |||| Sbjct: 143283 cgga 143280 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcacta 521 |||||||| ||||||||||||||||||||| | |||| |||||| Sbjct: 96971 tactcccttcgttcctaaatataagtctttttaaagatgtcacta 97015 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatt 515 ||||||||| ||||||||||||||| | ||| ||||||| Sbjct: 1754 tactccctccgttcctaaatataagaccttttagagatt 1716 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Plus Query: 526 tctacatacggagcaaaatgagtgaatcta 555 |||||||||||||||||| |||| |||||| Sbjct: 143226 tctacatacggagcaaaacgagtaaatcta 143255 Score = 44.1 bits (22), Expect = 0.59 Identities = 37/42 (88%) Strand = Plus / Minus Query: 527 ctacatacggagcaaaatgagtgaatctaaactctatagtat 568 ||||||||||| |||||||||| ||| || |||||| ||||| Sbjct: 142803 ctacatacggaacaaaatgagttaatttatactctaaagtat 142762 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtctttta 508 |||| |||| ||| |||||||||||||||||| Sbjct: 190752 tacttcctccgtttctaaatataagtctttta 190783 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 488 ttcctaaatataagtcttttaaga 511 ||||||||||||||| |||||||| Sbjct: 142670 ttcctaaatataagttttttaaga 142647
>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes, complete cds Length = 65979 Score = 107 bits (54), Expect = 5e-20 Identities = 84/94 (89%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 47280 tactccctccgttcctaaatataagtcttttaagagatttcactaagggtttacatacga 47339 Query: 537 agcaaaatgagtgaatctaaactctatagtatgt 570 || |||||||||||||| | ||| || ||||||| Sbjct: 47340 agtaaaatgagtgaatcaacactttaaagtatgt 47373 Score = 69.9 bits (35), Expect = 1e-08 Identities = 53/59 (89%) Strand = Plus / Minus Query: 476 gtactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatac 534 |||||||||| |||| |||||||||||||||| |||| ||||||||||| |||||||| Sbjct: 47444 gtactccctccgttcgtaaatataagtctttttagaggtttcactagagaactacatac 47386 Score = 61.9 bits (31), Expect = 3e-06 Identities = 68/79 (86%), Gaps = 1/79 (1%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| ||||||||||||||| | ||| | ||||| ||||| | ||| |||||| Sbjct: 61170 tactccctccgttcctaaatataagaccttttaaagattacactataaa-ctagatacgg 61112 Query: 537 agcaaaatgagtgaatcta 555 ||||||||||||||||||| Sbjct: 61111 agcaaaatgagtgaatcta 61093 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataa 500 ||||||||| |||||||||||||| Sbjct: 60938 tactccctccgttcctaaatataa 60961
>gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotransposon Sandra5, complete sequence; splicing factor SF2-like protein (SF2) and universal stress protein (USP1) genes and Hv receptor-kinase-like pseudogene, complete cds; and retrotransposons Sandra6 and Sandra7, complete sequence Length = 82293 Score = 103 bits (52), Expect = 7e-19 Identities = 70/76 (92%) Strand = Plus / Minus Query: 480 tccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacggagc 539 |||||| ||||||| ||||||||||||||||| |||||||||| ||||||||||| ||| Sbjct: 50628 tccctccgttcctagatataagtcttttaagatatttcactaggagtctacatacgaagc 50569 Query: 540 aaaatgagtgaatcta 555 |||||||||||||||| Sbjct: 50568 aaaatgagtgaatcta 50553 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttt 506 ||||||||| |||| ||||||||||||||| Sbjct: 50469 tactccctccgttcttaaatataagtcttt 50498
>emb|Y14573.1|HVCH4H Hordeum vulgare DNA for chromosome 4H Length = 59748 Score = 101 bits (51), Expect = 3e-18 Identities = 72/79 (91%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| |||||||||||||||||||||||| ||||||||| | ||||||||| | Sbjct: 23274 tactccctccgttcctaaatataagtcttttaaggaatttcactaatgatctacatacag 23333 Query: 537 agcaaaatgagtgaatcta 555 ||||||||||||||||||| Sbjct: 23334 agcaaaatgagtgaatcta 23352 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcacta 521 ||||||||| |||||||||||||||||||| | ||||||||||| Sbjct: 23437 tactccctctgttcctaaatataagtctttctaaagatttcacta 23393 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Minus Query: 494 aatataagtcttttaagagatttca 518 ||||||||||||||||||||||||| Sbjct: 23088 aatataagtcttttaagagatttca 23064
>gb|AY008692.1| Hordeum vulgare transcription factor GAMyb (Gamyb) gene, complete cds Length = 6228 Score = 101 bits (51), Expect = 3e-18 Identities = 72/79 (91%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| |||||||||||||||||||||||| |||||||||| | |||||||| || Sbjct: 5156 tactccctccgttcctaaatataagtcttttaagcgatttcactaaggatctacataggg 5215 Query: 537 agcaaaatgagtgaatcta 555 |||||||||| |||||||| Sbjct: 5216 agcaaaatgattgaatcta 5234 Score = 91.7 bits (46), Expect = 3e-15 Identities = 82/94 (87%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| || || ||||||||||||||||||| |||||||| | |||| ||||||| Sbjct: 5396 tactccctccgtaccaaaatataagtcttttaagatatttcactgggtgtctgcatacgg 5337 Query: 537 agcaaaatgagtgaatctaaactctatagtatgt 570 |||||||||| |||||||| ||| || ||||||| Sbjct: 5336 agcaaaatgaatgaatctatactttaaagtatgt 5303 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 491 ctaaatataagtcttttaagagatttcactagaggtctacatacgga 537 |||||||||||||||| |||||||| ||||| || ||||||||||| Sbjct: 5467 ctaaatataagtctttctagagattttactagtggactacatacgga 5421 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagt 502 ||||||||| |||||||||||||||| Sbjct: 5233 tactccctccgttcctaaatataagt 5258
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence Length = 108608 Score = 99.6 bits (50), Expect = 1e-17 Identities = 84/94 (89%), Gaps = 1/94 (1%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| ||||||||||||||||||||||||| |||| || || ||||||||||| Sbjct: 85397 tactccctctgttcctaaatataagtcttttaagatattt-accaggagtctacatacga 85339 Query: 537 agcaaaatgagtgaatctaaactctatagtatgt 570 |||||||||||| |||||| |||||| ||||||| Sbjct: 85338 agcaaaatgagtaaatctacactctaaagtatgt 85305 Score = 87.7 bits (44), Expect = 4e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| ||||||||||||||||||||||||| ||||||||| | |||||||| Sbjct: 91844 tactccctccgttcctaaatataagtcttttaagaaatttcactaagagactacatacaa 91785 Query: 537 agcaaaatgagtgaat 552 |||||||||||||||| Sbjct: 91784 agcaaaatgagtgaat 91769 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 487 gttcctaaatataagtcttttaagagatttcactagaggtctacatacgga 537 ||||||||||||||||||||| |||| |||||||| ||| ||||||||||| Sbjct: 91691 gttcctaaatataagtctttttagaggtttcactataggactacatacgga 91741 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 491 ctaaatataagtcttttaagagatttcactagaggtctacatacg 535 ||||||||||||||||| | | ||||||||||| ||||||||||| Sbjct: 18665 ctaaatataagtctttttaaaaatttcactagaagtctacatacg 18709 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 488 ttcctaaatataagtcttttaagagatttca 518 ||||||||||||||||||| ||||| ||||| Sbjct: 85246 ttcctaaatataagtctttaaagaggtttca 85276
>gb|AF338431.1|AF338431 Aegilops tauschii starch branching enzyme IIa gene, complete cds Length = 11475 Score = 97.6 bits (49), Expect = 5e-17 Identities = 80/89 (89%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 474 atgtactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacata 533 |||||||||||| |||||||||||||||||| | ||||||||||||| || ||||||| Sbjct: 8726 atgtactccctccgttcctaaatataagtctctgtagagatttcacta-tggactacata 8668 Query: 534 cggagcaaaatgagtgaatctaaactcta 562 || ||||||||||||||||||| |||||| Sbjct: 8667 cgaagcaaaatgagtgaatctacactcta 8639 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcacta 521 ||||||||| |||||||||||||||||||| ||||||| ||||| Sbjct: 8567 tactccctccgttcctaaatataagtctttgtagagattccacta 8611
>gb|AY821693.1| Australopyrum velutinum beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1595 Score = 93.7 bits (47), Expect = 7e-16 Identities = 78/87 (89%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 476 gtactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacg 535 |||||||||| ||||||||||||||||||||| ||||||| | || || ||||||||| Sbjct: 1378 gtactccctctgttcctaaatataagtctttttagagattctaata-tggactacatacg 1320 Query: 536 gagcaaaatgagtgaatctaaactcta 562 |||||||||||||||||||| |||||| Sbjct: 1319 gagcaaaatgagtgaatctacactcta 1293 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagattt 516 ||||||||| ||||||||||||||||||||| |||||||| Sbjct: 1216 tactccctccgttcctaaatataagtctttttagagattt 1255
>gb|DQ386610.1| Hordeum vulgare subsp. vulgare protein kinase ABC1063 gene, complete cds Length = 7813 Score = 93.7 bits (47), Expect = 7e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| || ||||||||||||| |||||||| |||||| |||| |||||||||||| Sbjct: 2192 tactccctccgtacctaaatataagtattttaagatatttcattagatgtctacatacgg 2251 Query: 537 agcaaaatgagtgaa 551 |||||||||| |||| Sbjct: 2252 agcaaaatgaatgaa 2266 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttt 506 ||||||||| |||||||||||||||||||| Sbjct: 2355 tactccctccgttcctaaatataagtcttt 2326
>gb|AY972619.1| Hordeum vulgare subsp. vulgare cultivar Morex subclone NRG098 cyclic nucleotide-gated ion channel 4 (Nec1) gene, complete cds Length = 9090 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 |||||| || |||||||||||||||||||| |||| ||||||||| ||||||||||| Sbjct: 8528 tactccatccgttcctaaatataagtctttaaagatatttcactaagaatctacatacgg 8469 Query: 537 agcaaaatgagtgaatctaaactcta 562 | ||||||||||||||||| |||||| Sbjct: 8468 accaaaatgagtgaatctacactcta 8443 Score = 61.9 bits (31), Expect = 3e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 476 gtactccctcggttcctaaatataagtcttttaagagatttca 518 |||||||||| |||||||||||||||| ||| ||||||||||| Sbjct: 8364 gtactccctccgttcctaaatataagtttttaaagagatttca 8406 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcacta 521 ||||||||| ||||||||||||||| ||||| ||||||| ||||| Sbjct: 346 tactccctccgttcctaaatataagactttttagagattgcacta 302 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 490 cctaaatataagtcttttaagagatttca 518 ||||||||||||||||| ||||||||||| Sbjct: 8245 cctaaatataagtctttaaagagatttca 8273
>gb|AF234163.1|AF234163 Hordeum vulgare starch synthase I (SSI) gene, complete cds Length = 8387 Score = 91.7 bits (46), Expect = 3e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| ||| ||||||||||||||||||||||||||||| | ||||||||||| Sbjct: 251 tactccctccgtttctaaatataagtcttttaagagatttcaccaagagtctacatacga 310 Query: 537 agcaaaatgagtgaatct 554 |||||||||| ||||||| Sbjct: 311 agcaaaatgaatgaatct 328 Score = 73.8 bits (37), Expect = 7e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 473 aatgtactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacat 532 ||||||||||||| |||||||||||||||||||| ||||||| |||||| | |||||| Sbjct: 420 aatgtactccctccgttcctaaatataagtctttctagagattccactagtagactacat 361 Query: 533 acgga 537 ||||| Sbjct: 360 acgga 356
>gb|AY821692.1| Australopyrum retrofractum beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1602 Score = 85.7 bits (43), Expect = 2e-13 Identities = 77/87 (88%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 476 gtactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacg 535 |||| ||||| ||||||||||||||||||||| ||||||| | || || ||||||||| Sbjct: 1384 gtaccccctctgttcctaaatataagtctttttagagattctaatat-ggactacatacg 1326 Query: 536 gagcaaaatgagtgaatctaaactcta 562 |||||||||||||||||||| |||||| Sbjct: 1325 gagcaaaatgagtgaatctacactcta 1299 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagattt 516 ||||||||| ||||||||||||||||||||| |||||||| Sbjct: 1222 tactccctccgttcctaaatataagtctttttagagattt 1261
>gb|DQ154923.1| Hordeum vulgare RAB7 (RAB7) gene, exons 1 through 6 and partial cds; and delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, complete cds Length = 13878 Score = 85.7 bits (43), Expect = 2e-13 Identities = 83/95 (87%), Gaps = 1/95 (1%) Strand = Plus / Minus Query: 476 gtactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacg 535 |||||| ||| ||||||||||||||||||||| ||||||| ||||| || |||||||| Sbjct: 7575 gtactcactccgttcctaaatataagtctttttagagattacacta-tggactacataca 7517 Query: 536 gagcaaaatgagtgaatctaaactctatagtatgt 570 ||||||||||||| ||||| |||||| ||||||| Sbjct: 7516 aagcaaaatgagtgcatctacactctaaagtatgt 7482 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcacta 521 ||||||||| |||||||||||| ||||||| ||||||| ||||| Sbjct: 7413 tactccctccattcctaaatataggtctttttagagattccacta 7457
>gb|DQ201148.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome C (PhyC 1b) pseudogene, complete sequence Length = 1147 Score = 83.8 bits (42), Expect = 7e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 476 gtactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacg 535 |||||||||| |||||||||||||||||||| |||||||||||||| || ||||||||| Sbjct: 441 gtactccctccgttcctaaatataagtctttgtagagatttcactagtggactacatacg 382 Query: 536 ga 537 || Sbjct: 381 ga 380
>gb|DQ352178.1| Hordeum vulgare subsp. vulgare rust resistance gene ABC1041 (ABC1041) gene, complete cds Length = 8735 Score = 83.8 bits (42), Expect = 7e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| ||||| ||||||||| | ||| || ||||||||||| | |||||||||| Sbjct: 5640 tactccctccgttccaaaatataagaccttttaggtatttcactagaagactacatacgg 5699 Query: 537 agcaaaatgagtgaatctaaactcta 562 ||||||||||| ||||||| |||||| Sbjct: 5700 agcaaaatgagcgaatctatactcta 5725 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatt 515 ||||||||| ||||||||||||||| | ||| ||||||| Sbjct: 5802 tactccctccgttcctaaatataagaccttttagagatt 5764
>gb|BT017023.1| Zea mays clone EK07D2312C08.c mRNA sequence Length = 540 Score = 81.8 bits (41), Expect = 3e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 205 ttttagcagttgtgttcccacgcgagggctctgatccatcaaagtggcgttcttatggca 264 ||||||||||| | |||||||| || || || |||||||||||||||||||||||||||| Sbjct: 12 ttttagcagttatcttcccacgtgaaggatccgatccatcaaagtggcgttcttatggca 71 Query: 265 caacgcagg 273 |||| |||| Sbjct: 72 caacacagg 80 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 350 acaggcgaggcaatgtttttctgtgagaggtgtgtaccctttgatggggagtactgacga 409 |||||| || |||||||| | |||||||| |||||||||||||||||||||||||| || Sbjct: 76 acaggcaagacaatgtttcgcagtgagaggcgtgtaccctttgatggggagtactgatga 135 Query: 410 gg 411 || Sbjct: 136 gg 137
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 81.8 bits (41), Expect = 3e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacata 533 ||||||||| ||| |||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 143731 tactccctccgttactaaatataagtcttttaagagattttactagacgtctacata 143675 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Minus Query: 475 tgtactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatac 534 ||||||||||| ||||| |||||||||| ||||||| ||||| |||| |||||||||| Sbjct: 30439 tgtactccctccgttccgaaatataagttttttaagcgattttactacgtgtctacatac 30380 Query: 535 ggagcaaaatgagtgaatctaaactcta 562 ||| |||||||| ||||| || |||||| Sbjct: 30379 ggaacaaaatgattgaatatacactcta 30352 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| |||||||||| ||||||||| ||| |||||||||| || |||||||||| Sbjct: 143568 tactccctccgttcctaaatgtaagtctttctagaaatttcactagtggactacatacgg 143627 Query: 537 a 537 | Sbjct: 143628 a 143628 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagattt 516 ||||||||| || ||||||||||||||||||||| ||||| Sbjct: 197492 tactccctccgtccctaaatataagtcttttaagcgattt 197531 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtctttt 507 ||||||||| ||| ||||||||||||||||| Sbjct: 30274 tactccctccgtttctaaatataagtctttt 30304 Score = 44.1 bits (22), Expect = 0.59 Identities = 37/42 (88%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttca 518 |||||||| ||| ||||||||||||||||| |||| ||||| Sbjct: 197654 tactcccttcgtttctaaatataagtctttttagaggtttca 197613
>gb|DQ351213.1| Hordeum vulgare subsp. vulgare resistance protein (ABC1037) gene, complete cds Length = 25080 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| |||||||||||||||||||| |||||||||||||||| | ||||||||| Sbjct: 21857 tactccctctgttcctaaatataagtctttaaagagatttcactagaagattacatacgg 21916 Query: 537 a 537 | Sbjct: 21917 a 21917 Score = 75.8 bits (38), Expect = 2e-10 Identities = 74/86 (86%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| |||| ||||||||| | ||| || ||||||||||| | ||||||||| Sbjct: 5528 tactccctccattccaaaatataagaccttttaggaatttcactagaagactacatacga 5469 Query: 537 agcaaaatgagtgaatctaaactcta 562 ||||||||||||||||||| |||||| Sbjct: 5468 agcaaaatgagtgaatctatactcta 5443 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcacta 521 ||||||||| | ||||||||||||||||||| ||||||||||||| Sbjct: 22020 tactccctccgatcctaaatataagtctttttagagatttcacta 21976 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatt 515 ||||||||| ||||||||||||||| | ||| ||||||| Sbjct: 5366 tactccctccgttcctaaatataagaccttttagagatt 5404
>dbj|AB058924.1| Hordeum vulgare gene for protein kinase HvPKABA1, complete cds, cultivar:Igri Length = 11684 Score = 81.8 bits (41), Expect = 3e-12 Identities = 84/97 (86%), Gaps = 1/97 (1%) Strand = Plus / Plus Query: 473 aatgtactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacat 532 ||||||||||||| ||||||||||| ||||| ||| | ||||||||||| | | |||||| Sbjct: 7398 aatgtactccctccgttcctaaatacaagtccttttaaagatttcactata-gactacat 7456 Query: 533 acggagcaaaatgagtgaatctaaactctatagtatg 569 ||| |||||||||||| |||||| | |||| |||||| Sbjct: 7457 acgaagcaaaatgagttaatctacattctaaagtatg 7493 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtctttt 507 ||||||||| ||||||||||||||||||||| Sbjct: 7564 tactccctccgttcctaaatataagtctttt 7534
>gb|DQ469712.1| Hordeum vulgare subsp. vulgare serine/threonine kinase-like protein ABC1036 gene, complete cds Length = 29663 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 474 atgtactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacata 533 |||||||||||| ||||||||| || |||||| ||||||| |||||| || ||||||| Sbjct: 17078 atgtactccctccattcctaaatgtatatctttttagagattccactaggggactacata 17137 Query: 534 cggagcaaaatgagtgaatcta 555 || |||||| |||||||||||| Sbjct: 17138 cgaagcaaagtgagtgaatcta 17159
>gb|AF308474.1|AF308474 Hordeum vulgare asparaginase gene, complete cds Length = 2659 Score = 75.8 bits (38), Expect = 2e-10 Identities = 80/94 (85%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| |||| ||||||||| |||||||||||| |||||||| | |||||| | | Sbjct: 1607 tactccctccgttcttaaatataaatcttttaagagacttcactagtgaactacatgcag 1548 Query: 537 agcaaaatgagtgaatctaaactctatagtatgt 570 | |||||||| ||||| || |||||| ||||||| Sbjct: 1547 aacaaaatgaatgaatgtacactctaaagtatgt 1514 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtctttt 507 ||||||||| |||||||||||||||||||| Sbjct: 1445 tactccctccattcctaaatataagtctttt 1475
>gb|AF536819.1| Triticum aestivum ADP glucose pyrophosphorylase gene, partial cds, alternatively spliced Length = 2512 Score = 75.8 bits (38), Expect = 2e-10 Identities = 74/86 (86%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| ||||||||||||| |||||| |||||||||| | | ||| |||||| Sbjct: 383 tactccctccgttcctaaatataggtctttgtagagatttcaacaagtgactatatacgg 442 Query: 537 agcaaaatgagtgaatctaaactcta 562 ||||||||||||||||||| |||||| Sbjct: 443 agcaaaatgagtgaatctacactcta 468 Score = 48.1 bits (24), Expect = 0.038 Identities = 30/32 (93%) Strand = Plus / Minus Query: 487 gttcctaaatataagtcttttaagagatttca 518 ||||||||||| ||||||||| |||||||||| Sbjct: 537 gttcctaaatacaagtctttttagagatttca 506
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 73.8 bits (37), Expect = 7e-10 Identities = 55/61 (90%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| ||||||||||||||||||||| ||| ||||||||| || |||||||||| Sbjct: 52474 tactccctccgttcctaaatataagtctttttagatgtttcactaggggactacatacgg 52415 Query: 537 a 537 | Sbjct: 52414 a 52414 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| ||||||||||||||||||||| |||| ||||| || | ||||||||||| Sbjct: 57344 tactccctccgttcctaaatataagtctttttagaggtttcattaaaaatctacatacgg 57403 Query: 537 a 537 | Sbjct: 57404 a 57404 Score = 56.0 bits (28), Expect = 2e-04 Identities = 77/92 (83%), Gaps = 1/92 (1%) Strand = Plus / Minus Query: 479 ctccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacggag 538 ||||||| ||| ||||||| |||||||||||||||||| ||||| | ||||||||| | Sbjct: 69794 ctccctccgtttctaaata-aagtcttttaagagattttactagcgaactacatacgaaa 69736 Query: 539 caaaatgagtgaatctaaactctatagtatgt 570 ||||||| | ||| || |||||| ||||||| Sbjct: 69735 taaaatgaataaatttacactctaaagtatgt 69704
>gb|AF474982.1| Hordeum vulgare clone BAC 011009, complete sequence Length = 77136 Score = 73.8 bits (37), Expect = 7e-10 Identities = 74/85 (87%), Gaps = 1/85 (1%) Strand = Plus / Plus Query: 478 actccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgga 537 |||||||| ||||||||||||||| ||||| |||| || | || || ||||||||||| Sbjct: 56779 actccctccgttcctaaatataagccttttcagagtttccgatat-ggactacatacgga 56837 Query: 538 gcaaaatgagtgaatctaaactcta 562 |||||||||||||||||| |||||| Sbjct: 56838 gcaaaatgagtgaatctacactcta 56862
>emb|Y10814.1|HVPRP4 H.vulgare mRNA for pathogenic related protein 4 Length = 728 Score = 69.9 bits (35), Expect = 1e-08 Identities = 72/83 (86%), Gaps = 1/83 (1%) Strand = Plus / Plus Query: 475 tgtactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatac 534 ||||||||||| || ||||||||||||||||||||| ||||||||| ||||| ||| Sbjct: 636 tgtactccctccgtatctaaatataagtcttttaagatatttcactaagtgtctatatat 695 Query: 535 ggagcaaaatgagtgaatctaaa 557 | ||||||| ||||||||||||| Sbjct: 696 gaagcaaaa-gagtgaatctaaa 717
>emb|AJ507395.1|HVU507395 Hordeum vulgare subsp. vulgare rpoT gene for DNA-directed RNA polymerase, chloroplast precursor, exons 1-19 Length = 10573 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Minus Query: 493 aaatataagtcttttaagagatttcactagaggtctacatacggagcaaaatgagtgaat 552 ||||||||| | ||| |||||||||| || | | |||||||||||||||||||||||||| Sbjct: 10533 aaatataagaccttttagagatttcattaaaagactacatacggagcaaaatgagtgaat 10474 Query: 553 cta 555 ||| Sbjct: 10473 cta 10471 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataag 501 ||||||||| ||||||||||||||| Sbjct: 10387 tactccctccgttcctaaatataag 10411
>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence Length = 103866 Score = 69.9 bits (35), Expect = 1e-08 Identities = 69/79 (87%), Gaps = 1/79 (1%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| |||||||||||||||||||| ||| |||| || || | | | ||||| || Sbjct: 23112 tactccctccgttcctaaatataagtctttgaagtgattccattata-gaccacataagg 23170 Query: 537 agcaaaatgagtgaatcta 555 ||||||||||||||||||| Sbjct: 23171 agcaaaatgagtgaatcta 23189 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcacta 521 |||| |||| |||||||||||||||||||| ||||||||||||| Sbjct: 23272 tacttcctccgttcctaaatataagtctttgtagagatttcacta 23228 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatt 515 ||||||||| |||||||||||||||||||| ||||||| Sbjct: 51932 tactccctccgttcctaaatataagtctttctagagatt 51894 Score = 48.1 bits (24), Expect = 0.038 Identities = 36/40 (90%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagattt 516 |||||| || ||||||||||||||||||||| ||| |||| Sbjct: 51768 tactccttccgttcctaaatataagtctttttagacattt 51807
>gb|AF022725.1|AF022725 Hordeum vulgare limit dextrinase (HvLD99) gene, complete cds Length = 12034 Score = 69.9 bits (35), Expect = 1e-08 Identities = 66/75 (88%), Gaps = 1/75 (1%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 |||||||||||||||| ||||||||| ||| ||||||| ||||| || ||| |||||| Sbjct: 3562 tactccctcggttccttaatataagtatttctagagattccacta-tggactatatacgg 3620 Query: 537 agcaaaatgagtgaa 551 ||||||||||||||| Sbjct: 3621 agcaaaatgagtgaa 3635 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 475 tgtactccctcggttcctaaatataagtctttt 507 ||||||||||| ||||||||||| ||||||||| Sbjct: 3722 tgtactccctccgttcctaaatacaagtctttt 3690
>gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspar, XJ, Angela, and XJ, complete sequence; LRR protein WM1.7 (WM1.7) and LRR protein WM1.12 (WM1.12) genes, complete cds; transposons Ophelia2, Angela3s, and XJ3, complete sequence; LRR protein WM1.3 (WM1.3) gene, complete cds; Stowaway MITE, transposons XJ1, Jody, Angela, and XJ and Stowaway MITE, complete sequence; LRR protein WM1.2 (WM1.2) and LLR protein WM1.1 (WM1.1) genes, complete cds; transposons XJ, XA, Angela, and Fred and WM1.11 gene, complete sequence; RPM1-like sequence and LRR protein WM1.10 (WM1.10) genes, complete cds; and transposon XJ, complete sequence Length = 198649 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| ||||||||||| |||||| |||||||||| | | |||||||||| Sbjct: 70117 tactccctccattcctaaatatttgtctttctagagatttcaacaagtgactacatacgg 70058 Query: 537 agcaaaatgagtgaatctaaactcta 562 ||||||||||||||||||| |||||| Sbjct: 70057 agcaaaatgagtgaatctacactcta 70032 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 474 atgtactccctcggttcctaaatataagtcttttaagagatttca 518 |||||||||||| |||||||||||| ||||||| |||||||||| Sbjct: 69950 atgtactccctccgttcctaaatatttgtctttttagagatttca 69994
>emb|CR626934.1| Triticum aestivum Length = 94398 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| ||||| ||||||||||||| |||| ||||| | | |||||||||| Sbjct: 50076 tactccctccgttccataatataagtctttctagaggtttcaacaagtgactacatacgg 50017 Query: 537 agcaaaatgagtgaatctaaactcta 562 ||||||||||||||||||| |||||| Sbjct: 50016 agcaaaatgagtgaatctacactcta 49991 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 474 atgtactccctcggttcctaaatataagtcttttaagagatttca 518 |||||||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 49909 atgtactccctctgttcctaaatataagtctttttagacatttca 49953
>gb|AF343493.1| Secale cereale clone pla 3-phosphoglycerate kinase (Pgk-1) gene, partial cds; nuclear gene for plastid product Length = 1535 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| ||||| |||||||||||||| ||||||| || | | |||||||||| Sbjct: 1213 tactccctctgttcccaaatataagtctttctagagattccaacaagtgactacatacgg 1272 Query: 537 agcaaaatgagtgaatctaaactcta 562 ||||||||||||| ||||| |||||| Sbjct: 1273 agcaaaatgagtgtatctacactcta 1298 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 479 ctccctcggttcctaaatataagtcttttaagagatttca 518 ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 1375 ctccctccgttcctaaatataagtctttttagacatttca 1336
>dbj|AB182944.1| Triticum aestivum Wknox1b gene for KN1 homeobox protein, complete cds Length = 10847 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| |||||||||||| |||||| | |||||||| | | |||||||||| Sbjct: 7867 tactccctccgttcctaaatatttgtctttataaagatttcaacaagtgactacatacgg 7808 Query: 537 agcaaaatgagtgaatctaaactcta 562 ||||||||||||||||||| |||||| Sbjct: 7807 agcaaaatgagtgaatctacactcta 7782
>emb|AJ400714.1|TAE400714 Triticum aestivum vp1D gene for VIVIPAROUS1, exons 1-6 Length = 4230 Score = 67.9 bits (34), Expect = 4e-08 Identities = 74/86 (86%), Gaps = 1/86 (1%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| |||||||||||||||||||| | |||||||| || || | |||||||| Sbjct: 2946 tactccctccgttcctaaatataagtctttggacagatttcatta-tggaccacatacgg 2888 Query: 537 agcaaaatgagtgaatctaaactcta 562 || |||||||||||| ||| |||||| Sbjct: 2887 agtaaaatgagtgaacctatactcta 2862 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 475 tgtactccctcggttcctaaatataagtcttttaagagatttcacta 521 ||||||||||| ||||||||||||||||||| ||||||||||||| Sbjct: 2783 tgtactccctccattcctaaatataagtctttgtagagatttcacta 2829
>gb|AY641411.1| Hordeum vulgare subsp. vulgare Rph15.1 (Rph15.1) pseudogene, complete cds Length = 15688 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcacta 521 ||||||||| ||||||||||||||||||||| ||||||| ||||| Sbjct: 8721 tactccctcagttcctaaatataagtctttttagagattccacta 8765 Score = 54.0 bits (27), Expect = 6e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 492 taaatataagtcttttaagagatttcactagaggtctacatacggagcaaaatgagtgaa 551 |||||||||||| | | | |||||||| ||||| ||| ||||||| |||||||| |||| Sbjct: 15201 taaatataagtcgtattaaagatttcattagagaactatatacggaacaaaatgaatgaa 15142 Query: 552 tctaaactcta 562 |||| |||||| Sbjct: 15141 tctacactcta 15131 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 481 ccctcggttcctaaatataagtctttt 507 ||||| ||||||||||||||||||||| Sbjct: 8882 ccctccgttcctaaatataagtctttt 8856
>gb|DQ247831.1| Aegilops sharonensis voucher H6680 disrupted meiotic cDNA 1 (DMC1) gene, partial cds; and Stowaway miniature inverted-repeat transposable element, complete sequence Length = 1170 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 527 ctacatacggagcaaaatgagtgaatctaaactcta 562 ||||||||||||||||||||||||||||| |||||| Sbjct: 968 ctacatacggagcaaaatgagtgaatctacactcta 1003
>gb|DQ247830.1| Aegilops longissima voucher H6679 disrupted meiotic cDNA 1 (DMC1) gene, partial cds; and Stowaway miniature inverted-repeat transposable element, complete sequence Length = 1170 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 527 ctacatacggagcaaaatgagtgaatctaaactcta 562 ||||||||||||||||||||||||||||| |||||| Sbjct: 968 ctacatacggagcaaaatgagtgaatctacactcta 1003
>gb|AF334758.1|AF334758 Hordeum vulgare homeodomain protein JUBEL1 (JuBel1) gene, complete cds Length = 13757 Score = 63.9 bits (32), Expect = 6e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 487 gttcctaaatataagtcttttaagagatttcactagaggtctacatacggagcaaaatga 546 ||||| ||||||||||||| | | |||||||||||| | ||||||||| |||||||||| Sbjct: 11659 gttccaaaatataagtcttcttaaagatttcactaggagactacatacgaagcaaaatga 11718 Query: 547 gtgaatctaaactcta 562 || ||| || |||||| Sbjct: 11719 gtaaatttacactcta 11734 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcacta 521 |||||||||||||||||||| | |||||||| |||||||| |||| Sbjct: 11564 tactccctcggttcctaaatgttagtctttttagagattttacta 11520 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 474 atgtactccctcggttcctaaatataagtctt 505 |||||||| ||| ||| ||||||||||||||| Sbjct: 11399 atgtactctctctgtttctaaatataagtctt 11430
>gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A16, complete sequence Length = 133625 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 527 ctacatacggagcaaaatgagtgaatctaaactcta 562 ||||||||||||||||||||||||||||| |||||| Sbjct: 24760 ctacatacggagcaaaatgagtgaatctagactcta 24795
>emb|X81368.1|TAAWJL175 T.aestivumn (subclone pAWJL175) AWJL175 gene Length = 2374 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 527 ctacatacggagcaaaatgagtgaatctaaactcta 562 ||||||||||||||||||||||||||||| |||||| Sbjct: 2354 ctacatacggagcaaaatgagtgaatctacactcta 2319 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 474 atgtactccctcggttcctaaatataagtcttttaagagatttca 518 |||||||||||| |||||||||||| ||||||| |||||||||| Sbjct: 2237 atgtactccctccgttcctaaatatttgtctttttagagatttca 2281
>gb|AF108008.1|AF108008 Hordeum vulgare HV1LRR1 (HV1LRR1) gene, complete cds Length = 5163 Score = 63.9 bits (32), Expect = 6e-07 Identities = 72/86 (83%), Gaps = 1/86 (1%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| |||||||||||| | ||| ||| |||| |||| || |||||||||| Sbjct: 3843 tactccctccgttcctaaatatvvgascttttagacattttactatggg-ctacatacgg 3901 Query: 537 agcaaaatgagtgaatctaaactcta 562 | ||||||||||||||||| |||||| Sbjct: 3902 aacaaaatgagtgaatctatactcta 3927
>emb|X99705.1|TAPALGEN1 T.aestivum PAL gene Length = 3444 Score = 61.9 bits (31), Expect = 3e-06 Identities = 68/79 (86%), Gaps = 1/79 (1%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| ||| ||||||||||||| ||||||| |||| |||| ||| ||||| |||| Sbjct: 52 tactccctctgtttctaaatataagtcctttaagaaattttactatagg-ctacacacgg 110 Query: 537 agcaaaatgagtgaatcta 555 ||||||| | |||||||| Sbjct: 111 ggcaaaataaatgaatcta 129 Score = 40.1 bits (20), Expect = 9.3 Identities = 35/40 (87%) Strand = Plus / Minus Query: 482 cctcggttcctaaatataagtcttttaagagatttcacta 521 |||| |||||||||||||| || ||| ||||||| ||||| Sbjct: 210 cctctgttcctaaatataaatccttttagagattccacta 171
>gb|AF460219.1| Hordeum vulgare subsp. vulgare nuclear transcription factor SLN1 gene, complete cds Length = 4098 Score = 61.9 bits (31), Expect = 3e-06 Identities = 68/79 (86%), Gaps = 1/79 (1%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| ||||||||||||||| | ||| ||||||| ||||| | | ||| |||| Sbjct: 703 tactccctccgttcctaaatataagaccttttagagattacactata-gactaggtacga 761 Query: 537 agcaaaatgagtgaatcta 555 ||||||||||||||||||| Sbjct: 762 agcaaaatgagtgaatcta 780 Score = 42.1 bits (21), Expect = 2.3 Identities = 39/45 (86%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcacta 521 |||| |||| ||||||||||||||| | ||| ||||||| ||||| Sbjct: 863 tacttcctccgttcctaaatataagacattttagagattccacta 819
>emb|AJ507214.1|HVU507214 Hordeum vulgare bbr gene for barley B recombinant Length = 4946 Score = 61.9 bits (31), Expect = 3e-06 Identities = 75/87 (86%), Gaps = 2/87 (2%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctac-atacg 535 ||||||||| |||| |||||||||| | || ||| ||||||||| || |||| ||||| Sbjct: 1194 tactccctccgttcttaaatataagaccttgtagacatttcactataga-ctacgatacg 1136 Query: 536 gagcaaaatgagtgaatctaaactcta 562 |||||||||||||||||||| |||||| Sbjct: 1135 gagcaaaatgagtgaatctatactcta 1109 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 475 tgtactccctcggttcctaaatataag 501 ||||||||||| ||||||||||||||| Sbjct: 1030 tgtactccctccgttcctaaatataag 1056 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 527 ctacatacggagcaaaatgagtgaat 552 ||||||||||| |||||||||||||| Sbjct: 1331 ctacatacggaacaaaatgagtgaat 1306
>gb|AF122050.1|AF122050 Hordeum vulgare limit dextrinase gene, complete cds Length = 11462 Score = 61.9 bits (31), Expect = 3e-06 Identities = 65/75 (86%), Gaps = 1/75 (1%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 |||||||||||||||| ||||||||| ||| ||||||| ||||| || | | |||||| Sbjct: 3502 tactccctcggttccttaatataagtatttctagagattccacta-tggaccatatacgg 3560 Query: 537 agcaaaatgagtgaa 551 ||||||||||||||| Sbjct: 3561 agcaaaatgagtgaa 3575 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 475 tgtactccctcggttcctaaatataagtctttt 507 ||||||||||| ||||||||||||||||||||| Sbjct: 3662 tgtactccctccgttcctaaatataagtctttt 3630
>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttca 518 ||||||||| |||| ||||||||||||||||||| ||||||| Sbjct: 6361 tactccctctgttcttaaatataagtcttttaagcgatttca 6320 Score = 58.0 bits (29), Expect = 4e-05 Identities = 54/61 (88%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacatacgg 536 ||||||||| ||||| |||||||||| ||| ||||||||||||| ||| |||||||||| Sbjct: 6199 tactccctccgttccataatataagtcattttagagatttcacta-aggactacatacgg 6257 Query: 537 a 537 | Sbjct: 6258 a 6258
>emb|X58565.1|HVPRP1C H.vulgare mRNA for a pathogenesis-related protein (Hv-1c) Length = 748 Score = 58.0 bits (29), Expect = 4e-05 Identities = 68/81 (83%), Gaps = 5/81 (6%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaa-----tataagtcttttaagagatttcactagaggtctaca 531 ||||||||| ||||||||| ||||| ||||||||||||||| ||||| || ||||| Sbjct: 628 tactccctccgttcctaaatacagtataaatcttttaagagattttactagtggactaca 687 Query: 532 tacggagcaaaatgagtgaat 552 |||| | |||||| ||||||| Sbjct: 688 tacgaaacaaaataagtgaat 708
>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness locus region Length = 160897 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtctttta 508 ||||||||| |||||||||||||||||||||| Sbjct: 148724 tactccctccgttcctaaatataagtctttta 148693
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 487 gttcctaaatataagtcttttaagagatttca 518 ||||||||||||||||||||| |||||||||| Sbjct: 260168 gttcctaaatataagtctttttagagatttca 260199 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 527 ctacatacggagcaaaatgagtgaatcta 555 ||||||||||| |||||||| |||||||| Sbjct: 355558 ctacatacggaacaaaatgaatgaatcta 355586 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 494 aatataagtcttttaagagatttca 518 |||||||||||||| |||||||||| Sbjct: 259914 aatataagtctttttagagatttca 259938 Score = 40.1 bits (20), Expect = 9.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagattt 516 ||||||||| ||| |||||||||||| |||| ||| |||| Sbjct: 336064 tactccctctgttactaaatataagtatttttagatattt 336103
>gb|DQ220740.1| Aegilops sharonensis genomic sequence Length = 3804 Score = 56.0 bits (28), Expect = 2e-04 Identities = 66/77 (85%), Gaps = 5/77 (6%) Strand = Plus / Minus Query: 480 tccctcggttcctaaatataagtcttttaagagatttcac---tagaggtctacatacgg 536 |||||| |||||||||||| ||||||||||| ||||||| |||| ||| |||||| Sbjct: 2788 tccctccgttcctaaatat--gtcttttaagaaatttcactagtagaaaactatatacgg 2731 Query: 537 agcaaaatgagtgaatc 553 ||||||||||||||||| Sbjct: 2730 agcaaaatgagtgaatc 2714
>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence Length = 190469 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 527 ctacatacggagcaaaatgagtgaatctaaactcta 562 ||||||||||| ||||||||||||||||| |||||| Sbjct: 172968 ctacatacggaacaaaatgagtgaatctacactcta 173003
>gb|AY972629.1| Hordeum vulgare subsp. vulgare cultivar Morex subclone NRG095 cyclic nucleotide-gated ion channel 1 (CNGC1) gene, partial cds Length = 5200 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 478 actccctcggttcctaaatataagtcttttaa 509 |||||||| ||||||||||||||||||||||| Sbjct: 2768 actccctctgttcctaaatataagtcttttaa 2799
>gb|DQ013359.1| Triticum aestivum wall-associated kinase 3 (WAK3) gene, complete cds Length = 5331 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 527 ctacatacggagcaaaatgagtgaatctaaactcta 562 ||||||||||||||||||||||||||| | |||||| Sbjct: 348 ctacatacggagcaaaatgagtgaatccacactcta 313
>gb|AY642925.1| Hordeum vulgare BAC 124C9, complete sequence Length = 12258 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 492 taaatataagtcttttaagagatttcactagaggtctacatacggagcaaaatgagtgaa 551 |||||||||||||||||||| |||| | |||| ||||| ||||| | |||||| | |||| Sbjct: 3896 taaatataagtcttttaagatattttattagaagtctatatacgaaacaaaataaatgaa 3837 Query: 552 tcta 555 |||| Sbjct: 3836 tcta 3833 Score = 44.1 bits (22), Expect = 0.59 Identities = 40/46 (86%) Strand = Plus / Plus Query: 492 taaatataagtcttttaagagatttcactagaggtctacatacgga 537 ||||||||||||||| | ||| ||||| ||| || ||||||||||| Sbjct: 3763 taaatataagtctttaaggaggtttcattagtggactacatacgga 3808
>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence Length = 285444 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 489 tcctaaatataagtcttttaagagatttcactagaggtctacatacggagcaaaatgagt 548 |||||||||| ||||||| |||||||||| | | | |||||||| ||||||||||||| Sbjct: 198461 tcctaaatatttgtctttttagagatttcaacaaatgactacatacagagcaaaatgagt 198520 Query: 549 gaatcta 555 |||||| Sbjct: 198521 aaatcta 198527 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 489 tcctaaatataagtcttttaagagatttcactagaggtctacatacggagcaaaatgagt 548 |||||||||| ||||||| |||||||||| | | | |||||||| ||||||||||||| Sbjct: 44707 tcctaaatatttgtctttttagagatttcaacaaatgactacatacagagcaaaatgagt 44766 Query: 549 gaatcta 555 |||||| Sbjct: 44767 aaatcta 44773
>gb|AY133251.1|AY133250S2 Hordeum vulgare subsp. vulgare starch synthase II gene, exon 9 and complete cds Length = 3856 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 485 cggttcctaaatataagtcttttaagagatttcactag 522 |||||||||||||||||||||| ||||| |||||||| Sbjct: 3802 cggttcctaaatataagtctttaaagagggttcactag 3839
>emb|AJ272313.1|HVU272313 Hordeum vulgare mRNA for gamma tubulin (gtub gene) Length = 2039 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttca 518 |||||| || ||||||||||||||||||||| ||| |||||| Sbjct: 1906 tactccatccgttcctaaatataagtctttttagacatttca 1947
>emb|X68288.1|TAECPRO T.aestivum gene for EC protein Length = 3065 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 527 ctacatacggagcaaaatgagtgaatcta 555 |||||||||||||||||||| |||||||| Sbjct: 1811 ctacatacggagcaaaatgaatgaatcta 1783 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 474 atgtactccctcggttcctaaatat 498 |||||||||||| |||||||||||| Sbjct: 1873 atgtactccctccgttcctaaatat 1849
>gb|AF189727.1|AF189727 Hordeum vulgare NRT2.3 gene, promoter sequence Length = 1557 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 527 ctacatacggagcaaaatgagtgaatcta 555 |||||||| |||||||||||||||||||| Sbjct: 536 ctacatacagagcaaaatgagtgaatcta 508
>emb|AJ459252.1|TAE459252 Triticum aestivum TAA1b gene for fatty acyl coA reductase Length = 4308 Score = 48.1 bits (24), Expect = 0.038 Identities = 36/40 (90%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtcttttaagagattt 516 ||||||||| |||||||||||||||| |||| ||| |||| Sbjct: 1134 tactccctccgttcctaaatataagtttttttagacattt 1095
>gb|AC116475.7| Mus musculus chromosome 8, clone RP23-386N2, complete sequence Length = 184741 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Minus Query: 278 taacatgcatatctatctatctgt 301 |||||||||||||||||||||||| Sbjct: 63745 taacatgcatatctatctatctgt 63722
>gb|AY887089.1| Hordeum vulgare subsp. vulgare clone BAC 423G22 phytochelatin synthetase-like protein (PCS-a) pseudogene, complete sequence Length = 5106 Score = 48.1 bits (24), Expect = 0.038 Identities = 33/36 (91%) Strand = Plus / Minus Query: 527 ctacatacggagcaaaatgagtgaatctaaactcta 562 ||||||| | ||||||||||||||||||| |||||| Sbjct: 2293 ctacataagaagcaaaatgagtgaatctacactcta 2258
>gb|M62740.1|BLYGLB2 Hordeum vulgare 1,3-1,4-beta-D glucan 4-glucanohydrolase (Glb 2) gene, intron 1 Length = 5159 Score = 48.1 bits (24), Expect = 0.038 Identities = 48/56 (85%) Strand = Plus / Plus Query: 491 ctaaatataagtcttttaagagatttcactagaggtctacatacggagcaaaatga 546 ||||||||||| |||| |||||||||| ||| | ||||||||| |||||||||| Sbjct: 1213 ctaaatataaggttttttagagatttcattaggagactacatacgaagcaaaatga 1268
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence Length = 153766 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtctttt 507 ||||||||| || |||||||||||||||||| Sbjct: 8717 tactccctctgtacctaaatataagtctttt 8687 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 490 cctaaatataagtcttttaagagatt 515 |||||||||||||||||| ||||||| Sbjct: 8573 cctaaatataagtctttttagagatt 8598
>gb|AY133250.1|AY133250S1 Hordeum vulgare subsp. vulgare starch synthase II gene, exons 1 through 8 Length = 4976 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 488 ttcctaaatataagtcttttaagagatttca 518 |||||||||||||||||||| | |||||||| Sbjct: 2219 ttcctaaatataagtctttttatagatttca 2249 Score = 40.1 bits (20), Expect = 9.3 Identities = 38/44 (86%) Strand = Plus / Minus Query: 527 ctacatacggagcaaaatgagtgaatctaaactctatagtatgt 570 ||||||||||| | ||||||||| ||||| ||||| ||||||| Sbjct: 2320 ctacatacggatccaaatgagtggatctactctctaaagtatgt 2277
>emb|X58564.1|HVPRP1A H.vulgare mRNA for a pathogenesis-related protein (Hv-1a) Length = 809 Score = 46.1 bits (23), Expect = 0.15 Identities = 56/67 (83%) Strand = Plus / Plus Query: 502 tcttttaagagatttcactagaggtctacatacggagcaaaatgagtgaatctaaactct 561 ||||||||||||||| |||| || | ||||||| | |||||| ||||||| || ||||| Sbjct: 697 tcttttaagagattttactaatggacaacatacgaaacaaaataagtgaatgtatactct 756 Query: 562 atagtat 568 | ||||| Sbjct: 757 aaagtat 763
>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence Length = 187012 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataagtctttt 507 ||||||||| || |||||||||||||||||| Sbjct: 17325 tactccctctgtacctaaatataagtctttt 17295 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 490 cctaaatataagtcttttaagagatt 515 |||||||||||||||||| ||||||| Sbjct: 17181 cctaaatataagtctttttagagatt 17206
>dbj|AP006347.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT02G18, TM0334a, complete sequence Length = 77969 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 475 tgtactccctcggttcctaaatataag 501 ||||||||||| ||||||||||||||| Sbjct: 40508 tgtactccctccgttcctaaatataag 40534 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataag 501 ||||||||| ||||||||||||||| Sbjct: 40819 tactccctccgttcctaaatataag 40795
>gb|BT009452.1| Triticum aestivum clone wlmk8.pk0022.f7:fis, full insert mRNA sequence Length = 1996 Score = 44.1 bits (22), Expect = 0.59 Identities = 37/42 (88%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagagatttca 518 ||||||||| |||||||||||| ||||| | |||||||||| Sbjct: 783 tactccctccgttcctaaatatttgtcttcttagagatttca 824
>gb|AC092389.4| Oryza sativa chromosome 10 BAC OSJNBa0053C23 genomic sequence, complete sequence Length = 194361 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 476 gtactccctcggttcctaaatataag 501 |||||||||| ||||||||||||||| Sbjct: 158853 gtactccctctgttcctaaatataag 158878
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 476 gtactccctcggttcctaaatataag 501 |||||||||| ||||||||||||||| Sbjct: 20281118 gtactccctctgttcctaaatataag 20281143 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 475 tgtactccctcggttcctaaatataagt 502 ||||||||||| || ||||||||||||| Sbjct: 16510313 tgtactccctccgtccctaaatataagt 16510340 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 tgtactccctcggttcctaaatat 498 ||||||||||| |||||||||||| Sbjct: 13668694 tgtactccctccgttcctaaatat 13668717
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 474 atgtactccctcggttcctaaatata 499 |||||||||||| ||||||||||||| Sbjct: 12134807 atgtactccctcagttcctaaatata 12134832 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 473 aatgtactccctcggttcctaaatataa 500 ||||||||||||| ||||| |||||||| Sbjct: 21270076 aatgtactccctcagttccaaaatataa 21270049
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 476 gtactccctcggttcctaaatataag 501 |||||||||| ||||||||||||||| Sbjct: 20360120 gtactccctccgttcctaaatataag 20360095 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataag 501 ||||||||| ||||||||||||||| Sbjct: 20360048 tactccctctgttcctaaatataag 20360072 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 473 aatgtactccctcggttcctaaatataag 501 ||||||||||||| || |||||||||||| Sbjct: 16362969 aatgtactccctctgtccctaaatataag 16362941 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 aatgtactccctcggttcctaaat 496 |||||||||||| ||||||||||| Sbjct: 5786585 aatgtactcccttggttcctaaat 5786562
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Minus Query: 472 aaatgtactccctcggttcctaaatataag 501 |||||||||||||| ||||| ||||||||| Sbjct: 15656252 aaatgtactccctccgttccaaaatataag 15656223 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataag 501 ||||||||| ||||||||||||||| Sbjct: 10956533 tactccctccgttcctaaatataag 10956557 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 475 tgtactccctcggttcctaaatataagt 502 ||||||||||| ||||| |||||||||| Sbjct: 8202454 tgtactccctccgttccaaaatataagt 8202481
>dbj|AP005537.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056L09 Length = 152910 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 476 gtactccctcggttcctaaatataag 501 |||||||||| ||||||||||||||| Sbjct: 107868 gtactccctccgttcctaaatataag 107843 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataag 501 ||||||||| ||||||||||||||| Sbjct: 107796 tactccctctgttcctaaatataag 107820
>dbj|AP005580.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1759_F09 Length = 149501 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 474 atgtactccctcggttcctaaatata 499 |||||||||||| ||||||||||||| Sbjct: 46266 atgtactccctcagttcctaaatata 46291
>dbj|AP005525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0564H06 Length = 146823 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 474 atgtactccctcggttcctaaatata 499 |||||||||||| ||||||||||||| Sbjct: 69186 atgtactccctcagttcctaaatata 69211
>dbj|AP005514.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0035A24 Length = 176446 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Minus Query: 472 aaatgtactccctcggttcctaaatataag 501 |||||||||||||| ||||| ||||||||| Sbjct: 64939 aaatgtactccctccgttccaaaatataag 64910
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 476 gtactccctcggttcctaaatataag 501 |||||||||| ||||||||||||||| Sbjct: 20292394 gtactccctctgttcctaaatataag 20292419 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 475 tgtactccctcggttcctaaatataagt 502 ||||||||||| || ||||||||||||| Sbjct: 16518554 tgtactccctccgtccctaaatataagt 16518581 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 tgtactccctcggttcctaaatat 498 ||||||||||| |||||||||||| Sbjct: 13676036 tgtactccctccgttcctaaatat 13676059
>dbj|AP006098.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10G08, TM0175, complete sequence Length = 108582 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Minus Query: 474 atgtactccctcggttcctaaatataagtc 503 |||||||||||| ||||||| ||||||||| Sbjct: 83965 atgtactccctccgttcctatatataagtc 83936
>dbj|AP004466.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09C23, TM0001, complete sequence Length = 103397 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 476 gtactccctcggttcctaaatataag 501 |||||||||| ||||||||||||||| Sbjct: 30578 gtactccctccgttcctaaatataag 30603
>gb|AY494981.1| Triticum turgidum A genome HMW glutenin A gene locus, sequence Length = 307015 Score = 42.1 bits (21), Expect = 2.3 Identities = 72/89 (80%) Strand = Plus / Plus Query: 474 atgtactccctcggttcctaaatataagtcttttaagagatttcactagaggtctacata 533 |||||||||||| ||||| |||||| |||||| | |||||||| | | | |||| || Sbjct: 45393 atgtactccctccgttcccaaatatttgtctttctaaagatttcaacaaatgactacgta 45452 Query: 534 cggagcaaaatgagtgaatctaaactcta 562 || || ||||||||| |||||| |||||| Sbjct: 45453 cgaagtaaaatgagtaaatctacactcta 45481 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 474 atgtactccctcggttcctaaata 497 |||||||||||| ||||||||||| Sbjct: 50386 atgtactccctccgttcctaaata 50409
>gb|AC112209.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0030I09 map C83B, complete sequence Length = 123477 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 480 tccctcggttcctaaatataa 500 ||||||||||||||||||||| Sbjct: 34221 tccctcggttcctaaatataa 34241
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06, complete sequence Length = 187651 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataag 501 ||||||||| ||||||||||||||| Sbjct: 26803 tactccctccgttcctaaatataag 26827
>gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057E15, complete sequence Length = 149035 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 473 aatgtactccctcggttcctaaatataag 501 ||||||||||||| || |||||||||||| Sbjct: 91385 aatgtactccctctgtccctaaatataag 91357
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 474 atgtactccctcggttcctaaatat 498 |||||||||||| |||||||||||| Sbjct: 44322 atgtactccctccgttcctaaatat 44346
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataag 501 ||||||||| ||||||||||||||| Sbjct: 3478482 tactccctctgttcctaaatataag 3478458
>emb|CR962133.1| Medicago truncatula chromosome 5 clone mth2-17h8, COMPLETE SEQUENCE Length = 114811 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataag 501 ||||||||| ||||||||||||||| Sbjct: 99793 tactccctccgttcctaaatataag 99817
>gb|AY459341.1| Oryza sativa (japonica cultivar-group) clone CL031105.6 R2R3-MYB gene region Length = 58956 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataag 501 ||||||||| ||||||||||||||| Sbjct: 54103 tactccctccgttcctaaatataag 54079
>gb|AC092634.3| Homo sapiens BAC clone RP11-340I6 from 7, complete sequence Length = 194142 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 gtgttcaccttctcagggaga 77 ||||||||||||||||||||| Sbjct: 164029 gtgttcaccttctcagggaga 164009
>gb|AC122143.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0090F16, complete sequence Length = 147341 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 473 aatgtactccctcggttcctaaatataag 501 ||||||||||||| ||||| ||||||||| Sbjct: 88531 aatgtactccctccgttccaaaatataag 88559
>gb|AC104428.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1123F12, complete sequence Length = 103330 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataag 501 ||||||||| ||||||||||||||| Sbjct: 31893 tactccctctgttcctaaatataag 31917
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 476 gtactccctcggttcctaaatataa 500 |||||||||||||||| |||||||| Sbjct: 9735298 gtactccctcggttccaaaatataa 9735274
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataag 501 ||||||||| ||||||||||||||| Sbjct: 23958314 tactccctccgttcctaaatataag 23958338 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 474 atgtactccctcggttcctaaatataag 501 |||||||||||| ||||| ||||||||| Sbjct: 5505334 atgtactccctccgttccaaaatataag 5505361 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 474 atgtactccctcggttcctaaatataag 501 |||||||||||| ||||| ||||||||| Sbjct: 5461877 atgtactccctccgttccaaaatataag 5461850
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataag 501 ||||||||| ||||||||||||||| Sbjct: 3478593 tactccctctgttcctaaatataag 3478569
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 473 aatgtactccctcggttcctaaatataag 501 |||||||||||| ||||||||||||||| Sbjct: 35552718 aatgtactccctttgttcctaaatataag 35552690 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataag 501 |||||||||||| |||||||||||| Sbjct: 7610854 tactccctcggtccctaaatataag 7610878 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 478 actccctcggttcctaaatataag 501 |||||||| ||||||||||||||| Sbjct: 42091242 actccctccgttcctaaatataag 42091219 Score = 40.1 bits (20), Expect = 9.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 472 aaatgtactccctcggttcctaaatataagtctttt 507 |||||||||||||| || || |||||||||| |||| Sbjct: 41720841 aaatgtactccctccgtcccaaaatataagtatttt 41720876 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataa 500 ||||||||| |||||||||||||| Sbjct: 21121686 tactccctccgttcctaaatataa 21121709 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 478 actccctcggttcctaaatataag 501 |||||||| ||||||||||||||| Sbjct: 11591989 actccctccgttcctaaatataag 11591966
>gb|AC079790.6| Homo sapiens BAC clone RP11-484E6 from 2, complete sequence Length = 161723 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 aatgaaagtaaaagctgctgc 49 ||||||||||||||||||||| Sbjct: 119765 aatgaaagtaaaagctgctgc 119785
>dbj|AP003252.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0446G04 Length = 143515 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 473 aatgtactccctcggttcctaaatataag 501 |||||||||||| ||||||||||||||| Sbjct: 82905 aatgtactccctttgttcctaaatataag 82877
>dbj|AP002855.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0086P08 Length = 145312 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataag 501 |||||||||||| |||||||||||| Sbjct: 21430 tactccctcggtccctaaatataag 21454
>dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0708G02 Length = 168976 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataag 501 |||||||||||| |||||||||||| Sbjct: 159646 tactccctcggtccctaaatataag 159670
>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0456E06 Length = 164353 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 476 gtactccctcggttcctaaatataa 500 |||||||||||||||| |||||||| Sbjct: 25540 gtactccctcggttccaaaatataa 25516
>dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1756_H07 Length = 217205 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataag 501 ||||||||| ||||||||||||||| Sbjct: 162732 tactccctccgttcctaaatataag 162756
>dbj|AP005520.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0426E02 Length = 166985 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 473 aatgtactccctcggttcctaaatataag 501 ||||||||||||| || |||||||||||| Sbjct: 68821 aatgtactccctctgtccctaaatataag 68793
>gb|AC004835.2|AC004835 Homo sapiens clone DJ0555N02, complete sequence Length = 121803 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 308 ttttctttgaagggatccata 328 ||||||||||||||||||||| Sbjct: 48520 ttttctttgaagggatccata 48500
>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence Length = 184425 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataag 501 ||||||||| ||||||||||||||| Sbjct: 178140 tactccctccgttcctaaatataag 178116 Score = 42.1 bits (21), Expect = 2.3 Identities = 58/69 (84%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 487 gttcctaaatataagtcttttaagagatttcactagaggtctacatacggagcaaaatga 546 ||||||||||||||| | ||| |||||| ||||| | |||||||| |||||||||| Sbjct: 177990 gttcctaaatataagacattttggagattgcactata-aactacatacaaagcaaaatga 178048 Query: 547 gtgaatcta 555 ||||||||| Sbjct: 178049 gtgaatcta 178057
>dbj|AP006693.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT35C17, TM0399, complete sequence Length = 94919 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataag 501 ||||||||| ||||||||||||||| Sbjct: 78659 tactccctccgttcctaaatataag 78635
>dbj|AP006687.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT41F23, TM0382, complete sequence Length = 99748 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataag 501 ||||||||| ||||||||||||||| Sbjct: 4785 tactccctccgttcctaaatataag 4761 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataag 501 ||||||||| ||||||||||||||| Sbjct: 4477 tactccctccgttcctaaatataag 4501
>dbj|AP006410.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT29C05, TM0301a, complete sequence Length = 28124 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataag 501 ||||||||| ||||||||||||||| Sbjct: 27422 tactccctccgttcctaaatataag 27398
>dbj|AP006381.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT09G09, TM0234, complete sequence Length = 105887 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataag 501 ||||||||| ||||||||||||||| Sbjct: 26323 tactccctccgttcctaaatataag 26347
>dbj|AP006356.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT06I08, TM0082b, complete sequence Length = 93398 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataag 501 ||||||||| ||||||||||||||| Sbjct: 25824 tactccctccgttcctaaatataag 25848
>dbj|AP006143.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT16L07, TM0254, complete sequence Length = 118592 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataag 501 ||||||||| ||||||||||||||| Sbjct: 68703 tactccctccgttcctaaatataag 68727 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataag 501 ||||||||| ||||||||||||||| Sbjct: 57033 tactccctccgttcctaaatataag 57057
>dbj|AP006096.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10G09, TM0173b, complete sequence Length = 66866 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataag 501 ||||||||| ||||||||||||||| Sbjct: 3299 tactccctccgttcctaaatataag 3275
>dbj|AP004960.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT19B18, TM0139, complete sequence Length = 106089 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataag 501 ||||||||| ||||||||||||||| Sbjct: 12766 tactccctccgttcctaaatataag 12742
>dbj|AP004940.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT48I11, TM0106, complete sequence Length = 103636 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataag 501 ||||||||| ||||||||||||||| Sbjct: 23896 tactccctccgttcctaaatataag 23872 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataag 501 ||||||||| ||||||||||||||| Sbjct: 23587 tactccctccgttcctaaatataag 23611
>dbj|AP004898.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT01P23, TM0047b, complete sequence Length = 69411 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataag 501 ||||||||| ||||||||||||||| Sbjct: 44068 tactccctccgttcctaaatataag 44092
>dbj|AP004543.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT08G20, TM0102b, complete sequence Length = 38490 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataag 501 ||||||||| ||||||||||||||| Sbjct: 37259 tactccctccgttcctaaatataag 37283
>dbj|AP004526.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT05E07, TM0055, complete sequence Length = 94516 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataag 501 ||||||||| ||||||||||||||| Sbjct: 69524 tactccctccgttcctaaatataag 69548
>dbj|AP004506.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT03K03, TM0036a, complete sequence Length = 62624 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataag 501 ||||||||| ||||||||||||||| Sbjct: 12163 tactccctccgttcctaaatataag 12139
>dbj|AP004489.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT04I02, TM0021, complete sequence Length = 83700 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataag 501 ||||||||| ||||||||||||||| Sbjct: 44851 tactccctccgttcctaaatataag 44827 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataa 500 ||||||||| |||||||||||||| Sbjct: 44547 tactccctccgttcctaaatataa 44570
>dbj|D50641.1| Hordeum vulgare DNA for plant metallothionein-like protein, complete cds Length = 1819 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 474 atgtactccctcggttcctaaatataagtcttt 506 |||||||||||| ||| ||||||||||||||| Sbjct: 315 atgtactccctccgtttttaaatataagtcttt 347 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 gttcctaaatataagtcttt 506 |||||||||||||||||||| Sbjct: 469 gttcctaaatataagtcttt 450
>emb|AL672005.7| Mouse DNA sequence from clone RP23-401A9 on chromosome X, complete sequence Length = 123180 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 280 acatgcatatctatctatctg 300 ||||||||||||||||||||| Sbjct: 56324 acatgcatatctatctatctg 56344
>gb|AC115947.8| Mus musculus chromosome 5, clone RP24-560A18, complete sequence Length = 202882 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 acatgcatatctatctatct 299 |||||||||||||||||||| Sbjct: 74256 acatgcatatctatctatct 74275
>gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1007D10, complete sequence Length = 153366 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 474 atgtactccctcggttcctaaatataag 501 |||||||||||| ||||| ||||||||| Sbjct: 148551 atgtactccctccgttccaaaatataag 148524
>gb|AC137993.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0122P24, complete sequence Length = 136104 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 474 atgtactccctcggttcctaaatataag 501 |||||||||||| || |||||||||||| Sbjct: 11776 atgtactccctccgtccctaaatataag 11749
>gb|AC145271.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1140B01, complete sequence Length = 135184 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 474 atgtactccctcggttcctaaatataag 501 |||||||||||| ||||| ||||||||| Sbjct: 38543 atgtactccctccgttccaaaatataag 38570
>gb|AC132462.4| Mus musculus BAC clone RP23-35F22 from chromosome 7, complete sequence Length = 194641 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 583 tgctttttctttggagatct 602 |||||||||||||||||||| Sbjct: 95518 tgctttttctttggagatct 95499
>gb|AC144702.2| Danio rerio clone CH211-138D14, complete sequence Length = 192101 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 atgcatatctatctatctgt 301 |||||||||||||||||||| Sbjct: 112492 atgcatatctatctatctgt 112473
>gb|AC124547.4| Mus musculus BAC clone RP23-274I8 from chromosome 1, complete sequence Length = 225058 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 635 tttgtattacagcaattata 654 |||||||||||||||||||| Sbjct: 96301 tttgtattacagcaattata 96320
>emb|AL928724.10| Zebrafish DNA sequence from clone CH211-51K14 in linkage group 15, complete sequence Length = 165299 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 acatgcatatctatctatct 299 |||||||||||||||||||| Sbjct: 101292 acatgcatatctatctatct 101311
>emb|CR352310.15| Zebrafish DNA sequence from clone CH211-254E10 in linkage group 24, complete sequence Length = 181023 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 493 aaatataagtcttttaagagatttcact 520 ||||||||| || ||||||||||||||| Sbjct: 127181 aaatataagactgttaagagatttcact 127208
>emb|CR318627.19| Zebrafish DNA sequence from clone DKEYP-97F4 in linkage group 23, complete sequence Length = 176131 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 acatgcatatctatctatct 299 |||||||||||||||||||| Sbjct: 92016 acatgcatatctatctatct 92035
>ref|NM_004764.3| Homo sapiens piwi-like 1 (Drosophila) (PIWIL1), mRNA Length = 3416 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 catcgtcttctgcaggttag 177 |||||||||||||||||||| Sbjct: 2692 catcgtcttctgcaggttag 2673
>gb|AC145219.16| Medicago truncatula clone mth2-6m1, complete sequence Length = 140462 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 475 tgtactccctcggttcctaaatataagt 502 ||||||||||| | |||||||||||||| Sbjct: 2579 tgtactccctccgatcctaaatataagt 2606
>gb|AC146549.8| Medicago truncatula clone mth2-7p18, complete sequence Length = 96612 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 474 atgtactccctcggttcctaaatataag 501 |||||||||||| ||| ||||||||||| Sbjct: 53355 atgtactccctctgtttctaaatataag 53382
>gb|AC136449.21| Medicago truncatula clone mth2-11k13, complete sequence Length = 112369 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataa 500 ||||||||| |||||||||||||| Sbjct: 16869 tactccctccgttcctaaatataa 16846
>emb|CR848031.5| Zebrafish DNA sequence from clone DKEY-288I10 in linkage group 14, complete sequence Length = 160671 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 492 taaatataagtcttttaagagatt 515 ||||||||||||| |||||||||| Sbjct: 159840 taaatataagtctcttaagagatt 159863
>emb|AL513164.13| Human DNA sequence from clone RP11-400P17 on chromosome 6 Contains the 5' part of a novel gene, the 5' part of the gene for KIAA0790 protein (KIAA0790) and a CpG island, complete sequence Length = 154288 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 tatacttacatttactgact 346 |||||||||||||||||||| Sbjct: 140733 tatacttacatttactgact 140714
>emb|AL450107.11| Human DNA sequence from clone RP11-495K23 on chromosome 13 Contains the 3' end of a novel gene, complete sequence Length = 50886 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 aatgccagttttagcagttg 216 |||||||||||||||||||| Sbjct: 36697 aatgccagttttagcagttg 36678
>emb|AL138688.27| Human DNA sequence from clone RP11-264J4 on chromosome 13 Contains the 3' end of the ZNF198 gene for zinc finger protein 198, a novel gene, the GJA3 gene for gap junction protein, alpha3, 46kD (connexin 46), a peptidylpropyl isomerase D (cylophilin D) (PPID) pseudogene, the GJB2 gene for gap junction protein beta 2, 26 kD (connexin 26) and 6 CpG islands, complete sequence Length = 127794 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 acttacatttactgactgtt 349 |||||||||||||||||||| Sbjct: 2769 acttacatttactgactgtt 2788
>gb|BC028581.2| Homo sapiens piwi-like 1 (Drosophila), mRNA (cDNA clone MGC:26748 IMAGE:4827445), complete cds Length = 3394 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 catcgtcttctgcaggttag 177 |||||||||||||||||||| Sbjct: 2670 catcgtcttctgcaggttag 2651
>emb|AL606588.4|OSJN00023 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0016O02, complete sequence Length = 167988 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 tgtactccctcggttcctaaatat 498 ||||||||||| |||||||||||| Sbjct: 129621 tgtactccctccgttcctaaatat 129644
>emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L04, complete sequence Length = 143301 Score = 40.1 bits (20), Expect = 9.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagag 512 ||||||||| ||| |||||||||||| |||| |||| Sbjct: 41447 tactccctccgttactaaatataagtatttttagag 41482
>gb|AC127071.3| Homo sapiens 12 BAC RP11-200K12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 63578 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 catcgtcttctgcaggttag 177 |||||||||||||||||||| Sbjct: 50552 catcgtcttctgcaggttag 50533
>emb|AL954189.5| Mouse DNA sequence from clone RP23-405M24 on chromosome 4 Contains the 5' end of the Ptprd gene for receptor type protein tyrosine phosphatase D, complete sequence Length = 172364 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 tatggcacaacgcaggtaag 277 |||||||||||||||||||| Sbjct: 153108 tatggcacaacgcaggtaag 153127
>gb|AC068951.18| Oryza sativa chromosome 10 BAC OSJNBa0042E19 genomic sequence, complete sequence Length = 149978 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 475 tgtactccctcggttcctaaatataagt 502 ||||||||||| || ||||||||||||| Sbjct: 128412 tgtactccctccgtccctaaatataagt 128439
>dbj|AP004253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1116_C07 Length = 108208 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 478 actccctcggttcctaaatataag 501 |||||||| ||||||||||||||| Sbjct: 45785 actccctccgttcctaaatataag 45762
>dbj|AK023666.1| Homo sapiens cDNA FLJ13604 fis, clone PLACE1010401 Length = 1863 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 atctgtacatgattttcttt 315 |||||||||||||||||||| Sbjct: 1843 atctgtacatgattttcttt 1862
>gb|AC073372.9| Homo sapiens chromosome 11 clone RP11-500D4, complete sequence Length = 180504 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 cttctcagggagagctgccaggtg 88 ||||||||||||||| |||||||| Sbjct: 13237 cttctcagggagagcagccaggtg 13260
>gb|AC119072.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0073N20 BAC genomic sequence, complete sequence Length = 147289 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataa 500 ||||||||| |||||||||||||| Sbjct: 75052 tactccctctgttcctaaatataa 75029
>gb|AC090857.8| Homo sapiens chromosome 11, clone RP11-670N15, complete sequence Length = 180120 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 acatgcatatctatctatct 299 |||||||||||||||||||| Sbjct: 163572 acatgcatatctatctatct 163553
>gb|AC093742.3| Homo sapiens BAC clone RP11-24M8 from 4, complete sequence Length = 114455 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 acatgcatatctatctatct 299 |||||||||||||||||||| Sbjct: 79341 acatgcatatctatctatct 79322
>ref|XM_943308.1| PREDICTED: Homo sapiens hypothetical protein FLJ32810, transcript variant 4 (FLJ32810), mRNA Length = 2861 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 atctgtacatgattttcttt 315 |||||||||||||||||||| Sbjct: 2286 atctgtacatgattttcttt 2305
>ref|XM_925815.1| PREDICTED: Homo sapiens hypothetical protein FLJ32810, transcript variant 2 (FLJ32810), mRNA Length = 3217 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 atctgtacatgattttcttt 315 |||||||||||||||||||| Sbjct: 2642 atctgtacatgattttcttt 2661
>gb|AC025836.6| Homo sapiens chromosome 8, clone RP11-188I6, complete sequence Length = 139398 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 456 tgctatttccaatgttaaat 475 |||||||||||||||||||| Sbjct: 124731 tgctatttccaatgttaaat 124750
>gb|AC067794.5| Homo sapiens chromosome 11, clone RP11-558L11, complete sequence Length = 190489 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 acatgcatatctatctatct 299 |||||||||||||||||||| Sbjct: 169732 acatgcatatctatctatct 169751
>gb|AF104260.2| Homo sapiens HIWI mRNA, complete cds Length = 3362 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 catcgtcttctgcaggttag 177 |||||||||||||||||||| Sbjct: 2658 catcgtcttctgcaggttag 2639
>gb|AC158783.5| Mus musculus chromosome 5, clone RP23-144P3, complete sequence Length = 193276 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 acatgcatatctatctatct 299 |||||||||||||||||||| Sbjct: 45011 acatgcatatctatctatct 44992
>gb|AF387507.1|AF387507 Homo sapiens PIWI protein mRNA, complete cds Length = 3421 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 catcgtcttctgcaggttag 177 |||||||||||||||||||| Sbjct: 2665 catcgtcttctgcaggttag 2646
>gb|AC074142.3|AC074142 Homo sapiens chromosome 5 clone RP11-20B15, complete sequence Length = 161144 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 ctcaggatgctttttctttg 595 |||||||||||||||||||| Sbjct: 12383 ctcaggatgctttttctttg 12364
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 tgtactccctcggttcctaaatat 498 ||||||||||| |||||||||||| Sbjct: 23412300 tgtactccctccgttcctaaatat 23412323 Score = 40.1 bits (20), Expect = 9.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtcttttaagag 512 ||||||||| ||| |||||||||||| |||| |||| Sbjct: 20310814 tactccctccgttactaaatataagtatttttagag 20310849
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 474 atgtactccctcggttcctaaatataag 501 |||||||||||| |||| |||||||||| Sbjct: 3720320 atgtactccctccgttcttaaatataag 3720293
>gb|AF325198.1|AF325198 Triticum aestivum LRR14 (Lrr14), TAK14 (TAK14), and LRK14 (Lrk14) genes, complete cds; and unknown gene Length = 43606 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 474 atgtactccctcggttcctaaatataag 501 |||||||||||| ||||| ||||||||| Sbjct: 40429 atgtactccctccgttcccaaatataag 40402
>gb|AC102555.11| Mus musculus chromosome 8, clone RP23-163N19, complete sequence Length = 196060 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 catgcaaatgccatcatctt 149 |||||||||||||||||||| Sbjct: 50204 catgcaaatgccatcatctt 50223
>dbj|AP003259.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0466H10 Length = 176530 Score = 40.1 bits (20), Expect = 9.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 472 aaatgtactccctcggttcctaaatataagtctttt 507 |||||||||||||| || || |||||||||| |||| Sbjct: 136443 aaatgtactccctccgtcccaaaatataagtatttt 136478
>dbj|AP004368.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1139B11 Length = 136548 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 478 actccctcggttcctaaatataag 501 |||||||| ||||||||||||||| Sbjct: 78047 actccctccgttcctaaatataag 78024
>dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144D11 Length = 157943 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataa 500 ||||||||| |||||||||||||| Sbjct: 89231 tactccctccgttcctaaatataa 89254
>dbj|AP007204.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0008D05 Length = 134776 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 478 actccctcggttcctaaatataag 501 |||||||| ||||||||||||||| Sbjct: 98996 actccctccgttcctaaatataag 98973
>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1064G04 Length = 186704 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataa 500 ||||||||| |||||||||||||| Sbjct: 19195 tactccctccgttcctaaatataa 19218
>gb|AC027661.1| Oryza sativa (japonica cultivar-group) BAC nbxb0049A03 chromosome 10, complete sequence Length = 162101 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 tgtactccctcggttcctaaatat 498 ||||||||||| |||||||||||| Sbjct: 137696 tgtactccctccgttcctaaatat 137719
>gb|AC016549.8| Homo sapiens chromosome 5 clone CTC-250P22, complete sequence Length = 167830 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 ctcaggatgctttttctttg 595 |||||||||||||||||||| Sbjct: 46533 ctcaggatgctttttctttg 46552
>dbj|AP005862.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0038K02 Length = 118635 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 473 aatgtactccctcggttcctaaatataa 500 ||||||||||||| ||||| |||||||| Sbjct: 2455 aatgtactccctcagttccaaaatataa 2428
>dbj|AP003934.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0551A11 Length = 132384 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 478 actccctcggttcctaaatataag 501 |||||||| ||||||||||||||| Sbjct: 31113 actccctccgttcctaaatataag 31090
>dbj|AP004117.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1134_F06 Length = 130968 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 475 tgtactccctcggttcctaaatataagt 502 ||||||||||| ||||| |||||||||| Sbjct: 34600 tgtactccctccgttccaaaatataagt 34627
>dbj|AP005840.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0050F10 Length = 151986 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 474 atgtactccctcggttcctaaatataag 501 |||||||||||| |||| |||||||||| Sbjct: 64671 atgtactccctccgttcttaaatataag 64644
>emb|BX005374.5| Zebrafish DNA sequence from clone DKEY-29H23 in linkage group 15, complete sequence Length = 204318 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 acatgcatatctatctatct 299 |||||||||||||||||||| Sbjct: 155897 acatgcatatctatctatct 155916
>gb|AY946902.1| Oryza sativa microRNA MIR468j-2 precursor, gene, partial sequence Length = 150 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 474 atgtactccctcggttcctaaatataag 501 |||||||||||| || |||||||||||| Sbjct: 1 atgtactccctctgtccctaaatataag 28
>dbj|AP005416.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0094P23 Length = 149341 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 aatgtactccctcggttcctaaat 496 |||||||||||| ||||||||||| Sbjct: 141210 aatgtactcccttggttcctaaat 141187
>dbj|AP004589.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0556A11 Length = 138096 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 aatgtactccctcggttcctaaat 496 |||||||||||| ||||||||||| Sbjct: 40730 aatgtactcccttggttcctaaat 40707
>emb|X03042.2|TAGLU1AG Triticum aestivum Ay gene for high-molecular-weight glutenin Length = 8117 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 474 atgtactccctcggttcctaaata 497 |||||||||||| ||||||||||| Sbjct: 1088 atgtactccctccgttcctaaata 1111
>gb|AF181459.1|AF181459 Hordeum vulgare dehydrin (Dhn9) gene, complete cds Length = 1791 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 477 tactccctcggttcctaaatataagtct 504 ||||||||| ||| |||||||||||||| Sbjct: 1515 tactccctccgttactaaatataagtct 1542
>gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence Length = 323584 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 acatgcatatctatctatct 299 |||||||||||||||||||| Sbjct: 274201 acatgcatatctatctatct 274182
>dbj|AP002759.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-686G23, complete sequences Length = 177933 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 cttctcagggagagctgccaggtg 88 ||||||||||||||| |||||||| Sbjct: 104057 cttctcagggagagcagccaggtg 104034
>dbj|AP000872.5| Homo sapiens genomic DNA, chromosome 11q clone:RP11-727A20, complete sequences Length = 157330 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 atctgtacatgattttcttt 315 |||||||||||||||||||| Sbjct: 114105 atctgtacatgattttcttt 114124
>emb|BX248124.7| Zebrafish DNA sequence from clone CH211-214E3 in linkage group 12, complete sequence Length = 211571 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 492 taaatataagtcttttaagagatt 515 ||||||||||||| |||||||||| Sbjct: 135835 taaatataagtctcttaagagatt 135812
>dbj|AP001572.3| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1072G10 Length = 162489 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 456 tgctatttccaatgttaaat 475 |||||||||||||||||||| Sbjct: 79508 tgctatttccaatgttaaat 79527
>emb|BX323833.4| Pig DNA sequence from clone XX-554F3, complete sequence Length = 121483 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 tcaccttctcagggagagct 80 |||||||||||||||||||| Sbjct: 102874 tcaccttctcagggagagct 102893
>dbj|AP006696.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT17N21, TM0403, complete sequence Length = 97807 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 477 tactccctcggttcctaaatataa 500 ||||||||| |||||||||||||| Sbjct: 65081 tactccctctgttcctaaatataa 65058
>gb|AC165414.9| Mus musculus chromosome 8, clone RP23-424A21, complete sequence Length = 192707 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 catgcaaatgccatcatctt 149 |||||||||||||||||||| Sbjct: 124254 catgcaaatgccatcatctt 124273
>gb|AC169811.2| Rhesus Macaque CHR7 BAC CH250-119C16 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 166377 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 459 tatttccaatgttaaatgta 478 |||||||||||||||||||| Sbjct: 82814 tatttccaatgttaaatgta 82795
>gb|AC153541.4| Mus musculus 10 BAC RP23-80P5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222655 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 tcctaaatataagtctttta 508 |||||||||||||||||||| Sbjct: 117969 tcctaaatataagtctttta 117950
>emb|AL844149.4| Mouse DNA sequence from clone RP23-194D5 on chromosome 4, complete sequence Length = 199774 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 atacttacatttactgactg 347 |||||||||||||||||||| Sbjct: 18325 atacttacatttactgactg 18344
>gb|AC152973.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0076M01, complete sequence Length = 36050 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 474 atgtactccctcggttcctaaatataag 501 |||||||||||| ||||| ||||||||| Sbjct: 16208 atgtactccctccgttccaaaatataag 16181
>dbj|AP004714.1| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1016E5 Length = 152336 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 456 tgctatttccaatgttaaat 475 |||||||||||||||||||| Sbjct: 38913 tgctatttccaatgttaaat 38932 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,781,155 Number of Sequences: 3902068 Number of extensions: 7781155 Number of successful extensions: 155707 Number of sequences better than 10.0: 208 Number of HSP's better than 10.0 without gapping: 228 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 153484 Number of HSP's gapped (non-prelim): 2206 length of query: 678 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 655 effective length of database: 17,143,297,704 effective search space: 11228859996120 effective search space used: 11228859996120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
