ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal6o07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated rec... 108 1e-23
2VKOR1_RAT (Q6TEK4) Vitamin K epoxide reductase complex subunit 1... 35 0.17
3RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC... 35 0.30
4VKOR1_MOUSE (Q9CRC0) Vitamin K epoxide reductase complex subunit... 33 0.66
5BRL1_ARATH (Q9ZWC8) Serine/threonine-protein kinase BRI1-like 1 ... 26 2.5
6VKOR1_HUMAN (Q9BQB6) Vitamin K epoxide reductase complex subunit... 32 2.5
7SPAST_MOUSE (Q9QYY8) Spastin 30 5.6
8SPAST_HUMAN (Q9UBP0) Spastin 30 5.6
9SIRK_ARATH (O64483) Senescence-induced receptor-like serine/thre... 30 7.3

>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1|
           precursor (EC 2.7.11.1) (BRI1-associated receptor kinase
           1) (Somatic embryogenesis receptor-like kinase 3)
          Length = 615

 Score =  108 bits (271), Expect = 1e-23
 Identities = 69/150 (46%), Positives = 83/150 (55%), Gaps = 9/150 (6%)
 Frame = -2

Query: 709 RRNVFGYGIMLLELITGPEGV*PRTSCE*RRMS-----CCLXXXXXXXXXXXXXXXXXXX 545
           + +VFGYG+MLLELITG      + + +  R++       L                   
Sbjct: 472 KTDVFGYGVMLLELITG------QRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVD 525

Query: 544 XXXXXXKHEVEALIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERWEEWQKVEVVRQEA 365
                   EVE LIQVALLCTQ SPM+RPKMSEVVRMLEGDGLAERWEEWQK E+ RQ+ 
Sbjct: 526 LQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDF 585

Query: 364 ELAPRH---NDWIV-DSTFNLRAVELSGPR 287
                H   + WI+ DST  +     SGPR
Sbjct: 586 NYPTHHPAVSGWIIGDSTSQIENEYPSGPR 615



 Score = 48.5 bits (114), Expect(2) = 1e-08
 Identities = 23/29 (79%), Positives = 25/29 (86%)
 Frame = -1

Query: 617 NVMLLDWVKGLLKEKKVEMLVDPDLQSVY 531
           +VMLLDWVKGLLKEKK+E LVD DLQ  Y
Sbjct: 502 DVMLLDWVKGLLKEKKLEALVDVDLQGNY 530



 Score = 30.4 bits (67), Expect(2) = 1e-08
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = -3

Query: 657 QRAFDLARLANDDE 616
           QRAFDLARLANDD+
Sbjct: 489 QRAFDLARLANDDD 502



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>VKOR1_RAT (Q6TEK4) Vitamin K epoxide reductase complex subunit 1 (EC 1.1.4.1)|
           (Vitamin K1 2,3-epoxide reductase subunit 1)
          Length = 161

 Score = 35.4 bits (80), Expect = 0.17
 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
 Frame = -1

Query: 218 SSSLLYMMTDRVLLAVANLKGK-ECVLSILASVILVAGCTLLCWLM---LKSCCIVCTCT 51
           S+S+   M   + L +  L+G+   +L IL+S++ VAG   L W++   L   CIVC  T
Sbjct: 79  SNSIFGCMFYTIQLLLGCLRGRWASILLILSSLVSVAGSLYLAWILFFVLYDFCIVCITT 138

Query: 50  Y 48
           Y
Sbjct: 139 Y 139



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>RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC 2.7.11.1)|
          Length = 999

 Score = 34.7 bits (78), Expect = 0.30
 Identities = 23/94 (24%), Positives = 40/94 (42%)
 Frame = -2

Query: 709  RRNVFGYGIMLLELITGPEGV*PRTSCE*RRMSCCLXXXXXXXXXXXXXXXXXXXXXXXX 530
            + +++ +G++LLEL+TG +        +      C                         
Sbjct: 878  KSDIYSFGVVLLELVTGKQPTDSELGDKDMAKWVC------TALDKCGLEPVIDPKLDLK 931

Query: 529  XKHEVEALIQVALLCTQGSPMDRPKMSEVVRMLE 428
             K E+  +I + LLCT   P++RP M +VV ML+
Sbjct: 932  FKEEISKVIHIGLLCTSPLPLNRPSMRKVVIMLQ 965



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>VKOR1_MOUSE (Q9CRC0) Vitamin K epoxide reductase complex subunit 1 (EC 1.1.4.1)|
           (Vitamin K1 2,3-epoxide reductase subunit 1)
          Length = 161

 Score = 33.5 bits (75), Expect = 0.66
 Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
 Frame = -1

Query: 218 SSSLLYMMTDRVLLAVANLKGK-ECVLSILASVILVAGCTLLCWLM---LKSCCIVCTCT 51
           S+S+   +   + L +  L+G+   +L +L+S++ VAG   L W++   L   CIVC  T
Sbjct: 79  SNSIFGCLFYTLQLLLGCLRGRWASILLVLSSLVSVAGSVYLAWILFFVLYDFCIVCITT 138

Query: 50  Y 48
           Y
Sbjct: 139 Y 139



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>BRL1_ARATH (Q9ZWC8) Serine/threonine-protein kinase BRI1-like 1 precursor (EC|
            2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 1)
          Length = 1166

 Score = 25.8 bits (55), Expect(2) = 2.5
 Identities = 9/21 (42%), Positives = 17/21 (80%)
 Frame = -2

Query: 703  NVFGYGIMLLELITGPEGV*P 641
            +V+ YG++LLEL++G + + P
Sbjct: 1046 DVYSYGVILLELLSGKKPIDP 1066



 Score = 24.3 bits (51), Expect(2) = 2.5
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 608  LLDWVKGLLKEKKVEMLVDPDL 543
            L+ W K L +EK+   ++DP+L
Sbjct: 1075 LVGWAKQLYREKRGAEILDPEL 1096



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>VKOR1_HUMAN (Q9BQB6) Vitamin K epoxide reductase complex subunit 1 (EC 1.1.4.1)|
           (Vitamin K1 2,3-epoxide reductase subunit 1)
          Length = 163

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
 Frame = -1

Query: 146 VLSILASVILVAGCTLLCWLM---LKSCCIVCTCTY 48
           VL +L+S++ +AG   L W++   L   CIVC  TY
Sbjct: 104 VLMLLSSLVSLAGSVYLAWILFFVLYDFCIVCITTY 139



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>SPAST_MOUSE (Q9QYY8) Spastin|
          Length = 614

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = -2

Query: 520 EVEALIQVALLCTQGSPMDRPKMSEVVRMLEG 425
           E   L+   LLC QGSP+ + +++++ RM +G
Sbjct: 510 ETRLLLLKNLLCKQGSPLTQKELAQLARMTDG 541



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>SPAST_HUMAN (Q9UBP0) Spastin|
          Length = 616

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = -2

Query: 520 EVEALIQVALLCTQGSPMDRPKMSEVVRMLEG 425
           E   L+   LLC QGSP+ + +++++ RM +G
Sbjct: 512 ETRLLLLKNLLCKQGSPLTQKELAQLARMTDG 543



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>SIRK_ARATH (O64483) Senescence-induced receptor-like serine/threonine-protein|
           kinase precursor (FLG22-induced receptor-like kinase 1)
          Length = 876

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
 Frame = -2

Query: 502 QVALLCTQGSPMDRPKMSEVVRMLEG--DGLA---ERWEEWQKVEVVRQEAELAPR 350
           ++AL CT+ +   RP MS+VV  L+    G+    E +++  K+  V  + E+ PR
Sbjct: 819 EIALACTEHTSAQRPTMSQVVMELKQIVYGIVTDQENYDDSTKMLTVNLDTEMVPR 874


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,154,446
Number of Sequences: 219361
Number of extensions: 1269743
Number of successful extensions: 4470
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4464
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7252940416
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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