| Clone Name | rbaal6o07 |
|---|---|
| Clone Library Name | barley_pub |
>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1| precursor (EC 2.7.11.1) (BRI1-associated receptor kinase 1) (Somatic embryogenesis receptor-like kinase 3) Length = 615 Score = 108 bits (271), Expect = 1e-23 Identities = 69/150 (46%), Positives = 83/150 (55%), Gaps = 9/150 (6%) Frame = -2 Query: 709 RRNVFGYGIMLLELITGPEGV*PRTSCE*RRMS-----CCLXXXXXXXXXXXXXXXXXXX 545 + +VFGYG+MLLELITG + + + R++ L Sbjct: 472 KTDVFGYGVMLLELITG------QRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVD 525 Query: 544 XXXXXXKHEVEALIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERWEEWQKVEVVRQEA 365 EVE LIQVALLCTQ SPM+RPKMSEVVRMLEGDGLAERWEEWQK E+ RQ+ Sbjct: 526 LQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDF 585 Query: 364 ELAPRH---NDWIV-DSTFNLRAVELSGPR 287 H + WI+ DST + SGPR Sbjct: 586 NYPTHHPAVSGWIIGDSTSQIENEYPSGPR 615 Score = 48.5 bits (114), Expect(2) = 1e-08 Identities = 23/29 (79%), Positives = 25/29 (86%) Frame = -1 Query: 617 NVMLLDWVKGLLKEKKVEMLVDPDLQSVY 531 +VMLLDWVKGLLKEKK+E LVD DLQ Y Sbjct: 502 DVMLLDWVKGLLKEKKLEALVDVDLQGNY 530 Score = 30.4 bits (67), Expect(2) = 1e-08 Identities = 13/14 (92%), Positives = 14/14 (100%) Frame = -3 Query: 657 QRAFDLARLANDDE 616 QRAFDLARLANDD+ Sbjct: 489 QRAFDLARLANDDD 502
>VKOR1_RAT (Q6TEK4) Vitamin K epoxide reductase complex subunit 1 (EC 1.1.4.1)| (Vitamin K1 2,3-epoxide reductase subunit 1) Length = 161 Score = 35.4 bits (80), Expect = 0.17 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 4/61 (6%) Frame = -1 Query: 218 SSSLLYMMTDRVLLAVANLKGK-ECVLSILASVILVAGCTLLCWLM---LKSCCIVCTCT 51 S+S+ M + L + L+G+ +L IL+S++ VAG L W++ L CIVC T Sbjct: 79 SNSIFGCMFYTIQLLLGCLRGRWASILLILSSLVSVAGSLYLAWILFFVLYDFCIVCITT 138 Query: 50 Y 48 Y Sbjct: 139 Y 139
>RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC 2.7.11.1)| Length = 999 Score = 34.7 bits (78), Expect = 0.30 Identities = 23/94 (24%), Positives = 40/94 (42%) Frame = -2 Query: 709 RRNVFGYGIMLLELITGPEGV*PRTSCE*RRMSCCLXXXXXXXXXXXXXXXXXXXXXXXX 530 + +++ +G++LLEL+TG + + C Sbjct: 878 KSDIYSFGVVLLELVTGKQPTDSELGDKDMAKWVC------TALDKCGLEPVIDPKLDLK 931 Query: 529 XKHEVEALIQVALLCTQGSPMDRPKMSEVVRMLE 428 K E+ +I + LLCT P++RP M +VV ML+ Sbjct: 932 FKEEISKVIHIGLLCTSPLPLNRPSMRKVVIMLQ 965
>VKOR1_MOUSE (Q9CRC0) Vitamin K epoxide reductase complex subunit 1 (EC 1.1.4.1)| (Vitamin K1 2,3-epoxide reductase subunit 1) Length = 161 Score = 33.5 bits (75), Expect = 0.66 Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 4/61 (6%) Frame = -1 Query: 218 SSSLLYMMTDRVLLAVANLKGK-ECVLSILASVILVAGCTLLCWLM---LKSCCIVCTCT 51 S+S+ + + L + L+G+ +L +L+S++ VAG L W++ L CIVC T Sbjct: 79 SNSIFGCLFYTLQLLLGCLRGRWASILLVLSSLVSVAGSVYLAWILFFVLYDFCIVCITT 138 Query: 50 Y 48 Y Sbjct: 139 Y 139
>BRL1_ARATH (Q9ZWC8) Serine/threonine-protein kinase BRI1-like 1 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 1) Length = 1166 Score = 25.8 bits (55), Expect(2) = 2.5 Identities = 9/21 (42%), Positives = 17/21 (80%) Frame = -2 Query: 703 NVFGYGIMLLELITGPEGV*P 641 +V+ YG++LLEL++G + + P Sbjct: 1046 DVYSYGVILLELLSGKKPIDP 1066 Score = 24.3 bits (51), Expect(2) = 2.5 Identities = 9/22 (40%), Positives = 15/22 (68%) Frame = -1 Query: 608 LLDWVKGLLKEKKVEMLVDPDL 543 L+ W K L +EK+ ++DP+L Sbjct: 1075 LVGWAKQLYREKRGAEILDPEL 1096
>VKOR1_HUMAN (Q9BQB6) Vitamin K epoxide reductase complex subunit 1 (EC 1.1.4.1)| (Vitamin K1 2,3-epoxide reductase subunit 1) Length = 163 Score = 31.6 bits (70), Expect = 2.5 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 3/36 (8%) Frame = -1 Query: 146 VLSILASVILVAGCTLLCWLM---LKSCCIVCTCTY 48 VL +L+S++ +AG L W++ L CIVC TY Sbjct: 104 VLMLLSSLVSLAGSVYLAWILFFVLYDFCIVCITTY 139
>SPAST_MOUSE (Q9QYY8) Spastin| Length = 614 Score = 30.4 bits (67), Expect = 5.6 Identities = 12/32 (37%), Positives = 21/32 (65%) Frame = -2 Query: 520 EVEALIQVALLCTQGSPMDRPKMSEVVRMLEG 425 E L+ LLC QGSP+ + +++++ RM +G Sbjct: 510 ETRLLLLKNLLCKQGSPLTQKELAQLARMTDG 541
>SPAST_HUMAN (Q9UBP0) Spastin| Length = 616 Score = 30.4 bits (67), Expect = 5.6 Identities = 12/32 (37%), Positives = 21/32 (65%) Frame = -2 Query: 520 EVEALIQVALLCTQGSPMDRPKMSEVVRMLEG 425 E L+ LLC QGSP+ + +++++ RM +G Sbjct: 512 ETRLLLLKNLLCKQGSPLTQKELAQLARMTDG 543
>SIRK_ARATH (O64483) Senescence-induced receptor-like serine/threonine-protein| kinase precursor (FLG22-induced receptor-like kinase 1) Length = 876 Score = 30.0 bits (66), Expect = 7.3 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 5/56 (8%) Frame = -2 Query: 502 QVALLCTQGSPMDRPKMSEVVRMLEG--DGLA---ERWEEWQKVEVVRQEAELAPR 350 ++AL CT+ + RP MS+VV L+ G+ E +++ K+ V + E+ PR Sbjct: 819 EIALACTEHTSAQRPTMSQVVMELKQIVYGIVTDQENYDDSTKMLTVNLDTEMVPR 874 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 77,154,446 Number of Sequences: 219361 Number of extensions: 1269743 Number of successful extensions: 4470 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 4325 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4464 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7252940416 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)