ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal18g16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.037
2dbj|AP002746.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.037
3dbj|AK102403.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.037
4dbj|AK062109.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.037
5gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 46 0.14
6emb|Z70269.1|CEZK1086 Caenorhabditis elegans Cosmid ZK1086, comp... 44 0.57
7dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 44 0.57
8emb|BX004989.8| Zebrafish DNA sequence from clone CH211-167M4 in... 44 0.57
9gb|AF040654.3| Caenorhabditis elegans cosmid R06B10, complete se... 44 0.57
10gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 42 2.3
11gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 42 2.3
12gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 2.3
13emb|Z98050.1|HS451B15 Human DNA sequence from clone RP3-451B15 o... 42 2.3
14emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 42 2.3
15emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 2.3
16gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 42 2.3
17gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 42 2.3
18dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 2.3
19dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 2.3
20gb|AY108042.1| Zea mays PCO071771 mRNA sequence 42 2.3
21emb|CT009684.7| Mouse DNA sequence from clone RP23-127L21 on chr... 42 2.3
22ref|XM_450862.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.9
23gb|AC124151.4| Oryza sativa (japonica cultivar-group) chromosome... 40 8.9
24gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 8.9
25gb|AC005606.3| Homo sapiens chromosome 16, P1 clone 109-8C (LANL... 40 8.9
26gb|AC131592.10| Mus musculus chromosome 1, clone RP24-547I3, com... 40 8.9
27ref|XM_593413.2| PREDICTED: Bos taurus similar to zyg-11 homolog... 40 8.9
28gb|AC111010.5| Mus musculus BAC clone RP23-419L21 from chromosom... 40 8.9
29gb|AC146605.3| Mus musculus BAC clone RP23-304J7 from chromosome... 40 8.9
30ref|NM_016257.2| Homo sapiens hippocalcin like 4 (HPCAL4), mRNA 40 8.9
31gb|AC154885.8| Mus musculus chromosome 5, clone RP24-333I1, comp... 40 8.9
32gb|AC162173.4| Mus musculus chromosome 1, clone RP23-447B9, comp... 40 8.9
33gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.9
34gb|AC134459.4| Mus musculus BAC clone RP23-360L15 from chromosom... 40 8.9
35gb|AC115073.9| Mus musculus chromosome 8, clone RP24-417J18, com... 40 8.9
36gb|AC115116.6| Mus musculus BAC clone RP23-62I3 from chromosome ... 40 8.9
37gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 40 8.9
38gb|AC093513.3| Homo sapiens chromosome 16 clone CTD-2517G10, com... 40 8.9
39emb|BX088589.14| Zebrafish DNA sequence from clone DKEY-27E7 in ... 40 8.9
40emb|Z93382.1|CEF45G2 Caenorhabditis elegans Cosmid F45G2, comple... 40 8.9
41ref|XM_501889.1| Yarrowia lipolytica CLIB122, YALI0C16027g predi... 40 8.9
42gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 8.9
43gb|AC134885.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 8.9
44emb|X61084.1|CGRHOD C.griseus rhodopsin gene for opsin protein 40 8.9
45emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete ... 40 8.9
46emb|BX640432.1| Bordetella parapertussis strain 12822, complete ... 40 8.9
47emb|BX640413.1| Bordetella pertussis strain Tohama I, complete g... 40 8.9
48emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete ... 40 8.9
49emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete ... 40 8.9
50emb|AL136591.1|HSM801565 Homo sapiens mRNA; cDNA DKFZp761G122 (f... 40 8.9
51gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 8.9
52gb|AC084217.7| Mus Musculus Strain C57BL6/J Chromosome 5 RP23-32... 40 8.9
53ref|XM_939689.1| PREDICTED: Homo sapiens neuropeptide W (NPW), mRNA 40 8.9
54ref|XM_496111.2| PREDICTED: Homo sapiens neuropeptide W (NPW), mRNA 40 8.9
55gb|CP000249.1| Frankia sp. CcI3, complete genome 40 8.9
56gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 8.9
57gb|DQ067263.1| Kocuria rosea maltooligosyl trehalose synthase (t... 40 8.9
58dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
59dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
60dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
61dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
62gb|AC154574.2| Mus musculus BAC clone RP23-399K3 from chromosome... 40 8.9
63gb|AC008176.3|AC008176 Homo sapiens BAC clone RP11-451F11 from 7... 40 8.9
64gb|AC114272.4| Homo sapiens chromosome 19 clone LLNLR_296F4, com... 40 8.9
65dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 8.9
66dbj|AP005692.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
67gb|AE005126.1| Halobacterium sp. NRC-1 section 157 of 170 of the... 40 8.9
68ref|XM_321208.2| Anopheles gambiae str. PEST ENSANGP00000020095 ... 40 8.9
69emb|CR405682.23| Zebrafish DNA sequence from clone DKEYP-67E6 in... 40 8.9
70gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 8.9
71gb|AC154614.3| Mus musculus BAC clone RP23-255I2 from chromosome... 40 8.9
72gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.9
73gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.9
74emb|BX664712.3|CNS09SC2 Oryza sativa chromosome 12, . BAC B1373G... 40 8.9
75dbj|AB084276.1| Homo sapiens prepro-NPW mRNA for prepro-Neuropep... 40 8.9
76emb|AL929467.6| Zebrafish DNA sequence from clone CH211-148E17, ... 40 8.9
77gb|AC142099.3| Mus musculus BAC clone RP24-350H4 from 6, complet... 40 8.9
78gb|AC139320.4| Mus musculus BAC clone RP24-410G8 from 9, complet... 40 8.9
79emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 40 8.9
80gb|AC004030.2| Homo sapiens DNA from chromosome 19, cosmid F2185... 40 8.9
81gb|M55171.1|MUSOPS Mouse opsin (MOPS) gene, complete cds 40 8.9
82emb|AL365521.1|HST000257 Homo sapiens mRNA full length insert cD... 40 8.9
83emb|AL355177.14| Mouse DNA sequence from clone RP21-61H21 on chr... 40 8.9 
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                       
Query: 282     gtgaccctgatggttccgaaaaagggcgtcctcggcgacg 321
               ||||||||||| || || ||||| ||||||||||||||||
Sbjct: 4970689 gtgaccctgattgtccccaaaaaaggcgtcctcggcgacg 4970728
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>dbj|AP002746.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0671B11
          Length = 168372

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 282   gtgaccctgatggttccgaaaaagggcgtcctcggcgacg 321
             ||||||||||| || || ||||| ||||||||||||||||
Sbjct: 71142 gtgaccctgattgtccccaaaaaaggcgtcctcggcgacg 71181
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>dbj|AK102403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092K06, full
            insert sequence
          Length = 1907

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 282  gtgaccctgatggttccgaaaaagggcgtcctcggcgacg 321
            ||||||||||| || || ||||| ||||||||||||||||
Sbjct: 1684 gtgaccctgattgtccccaaaaaaggcgtcctcggcgacg 1645
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>dbj|AK062109.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-B07, full
            insert sequence
          Length = 1476

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 282  gtgaccctgatggttccgaaaaagggcgtcctcggcgacg 321
            ||||||||||| || || ||||| ||||||||||||||||
Sbjct: 1253 gtgaccctgattgtccccaaaaaaggcgtcctcggcgacg 1214
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 538     ggctggcgccgagggaaagagca 560
               |||||||||||||||||||||||
Sbjct: 2225098 ggctggcgccgagggaaagagca 2225120
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>emb|Z70269.1|CEZK1086 Caenorhabditis elegans Cosmid ZK1086, complete sequence
          Length = 17664

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 314  cggcgacggcgacgaaccggcg 335
            ||||||||||||||||||||||
Sbjct: 2437 cggcgacggcgacgaaccggcg 2416
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 522     gcgtccggcctcggccggctgg 543
               ||||||||||||||||||||||
Sbjct: 1194172 gcgtccggcctcggccggctgg 1194193
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>emb|BX004989.8| Zebrafish DNA sequence from clone CH211-167M4 in linkage group 6,
              complete sequence
          Length = 172968

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 110    tgttaatgccatgccagcaaca 131
              ||||||||||||||||||||||
Sbjct: 118383 tgttaatgccatgccagcaaca 118404
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>gb|AF040654.3| Caenorhabditis elegans cosmid R06B10, complete sequence
          Length = 40468

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 314  cggcgacggcgacgaaccggcg 335
            ||||||||||||||||||||||
Sbjct: 5259 cggcgacggcgacgaaccggcg 5238
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 336     gcggcaccggcctgctgatcg 356
               |||||||||||||||||||||
Sbjct: 1893169 gcggcaccggcctgctgatcg 1893189
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 526     ccggcctcggccggctggcgc 546
               |||||||||||||||||||||
Sbjct: 1707300 ccggcctcggccggctggcgc 1707320
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 336     gcggcaccggcctgctgatcg 356
               |||||||||||||||||||||
Sbjct: 1536716 gcggcaccggcctgctgatcg 1536696
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>emb|Z98050.1|HS451B15 Human DNA sequence from clone RP3-451B15 on chromosome 6p24 Contains
             the 3' end of the HIVEP1 gene for human immunodeficiency
             virus type I enhancer-binding protein 1, the EDN1 gene for
             endothelin 1 (ET1) and a SMT3 suppressor of mif two 3
             homolog 1 (yeast) (SMT3H1) pseudogene, complete sequence
          Length = 186510

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 546   ccgagggaaagagcagggaac 566
             |||||||||||||||||||||
Sbjct: 87614 ccgagggaaagagcagggaac 87594
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 526     ccggcctcggccggctggcgc 546
               |||||||||||||||||||||
Sbjct: 3042152 ccggcctcggccggctggcgc 3042172
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 336     gcggcaccggcctgctgatcg 356
               |||||||||||||||||||||
Sbjct: 1423804 gcggcaccggcctgctgatcg 1423784
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 334    cggcggcaccggcctgctgat 354
              |||||||||||||||||||||
Sbjct: 882371 cggcggcaccggcctgctgat 882351
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 526     ccggcctcggccggctggcgc 546
               |||||||||||||||||||||
Sbjct: 2190809 ccggcctcggccggctggcgc 2190829
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 309     gtcctcggcgacggcgacgaa 329
               |||||||||||||||||||||
Sbjct: 1453324 gtcctcggcgacggcgacgaa 1453304



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 310     tcctcggcgacggcgacgaa 329
               ||||||||||||||||||||
Sbjct: 6208983 tcctcggcgacggcgacgaa 6208964



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 310     tcctcggcgacggcgacgaa 329
               ||||||||||||||||||||
Sbjct: 1667594 tcctcggcgacggcgacgaa 1667613
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 313     tcggcgacggcgacgaaccggcggc 337
               ||||||||||||||||| |||||||
Sbjct: 5809997 tcggcgacggcgacgaagcggcggc 5809973
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>gb|AY108042.1| Zea mays PCO071771 mRNA sequence
          Length = 1197

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 307 gcgtcctcggcgacggcgacg 327
           |||||||||||||||||||||
Sbjct: 163 gcgtcctcggcgacggcgacg 143
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>emb|CT009684.7| Mouse DNA sequence from clone RP23-127L21 on chromosome 13, complete
             sequence
          Length = 205067

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 428   tgccaccaggcccagggaagg 448
             |||||||||||||||||||||
Sbjct: 72058 tgccaccaggcccagggaagg 72078
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>ref|XM_450862.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 282

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/31 (93%), Gaps = 2/31 (6%)
 Strand = Plus / Minus

                                          
Query: 314 cggcgacggcgacg--aaccggcggcggcac 342
           ||||||||||||||  |||||||||||||||
Sbjct: 52  cggcgacggcgacggcaaccggcggcggcac 22
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>gb|AC124151.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0019E05,
              complete sequence
          Length = 129021

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 317    cgacggcgacgaaccggcggcggc 340
              |||||||||||| |||||||||||
Sbjct: 112093 cgacggcgacgatccggcggcggc 112070
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 310     tcctcggcgacggcgacgaa 329
               ||||||||||||||||||||
Sbjct: 4003215 tcctcggcgacggcgacgaa 4003196
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>gb|AC005606.3| Homo sapiens chromosome 16, P1 clone 109-8C (LANL), complete sequence
          Length = 80662

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 362   ccgggcggccgtcgacgcga 381
             ||||||||||||||||||||
Sbjct: 78968 ccgggcggccgtcgacgcga 78987
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>gb|AC131592.10| Mus musculus chromosome 1, clone RP24-547I3, complete sequence
          Length = 154667

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   ctgccgaggaggaggattcg 423
             ||||||||||||||||||||
Sbjct: 40888 ctgccgaggaggaggattcg 40869
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>ref|XM_593413.2| PREDICTED: Bos taurus similar to zyg-11 homolog B (C. elegans)-like
            (LOC540351), mRNA
          Length = 4040

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 434  caggcccagggaaggaggga 453
            ||||||||||||||||||||
Sbjct: 3747 caggcccagggaaggaggga 3728
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>gb|AC111010.5| Mus musculus BAC clone RP23-419L21 from chromosome 14, complete sequence
          Length = 205141

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 195    ctctttcttcttcttgttgt 214
              ||||||||||||||||||||
Sbjct: 204181 ctctttcttcttcttgttgt 204200
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>gb|AC146605.3| Mus musculus BAC clone RP23-304J7 from chromosome 14, complete sequence
          Length = 225868

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 195    ctctttcttcttcttgttgt 214
              ||||||||||||||||||||
Sbjct: 166119 ctctttcttcttcttgttgt 166100
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>ref|NM_016257.2| Homo sapiens hippocalcin like 4 (HPCAL4), mRNA
          Length = 4277

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 60   tcttagtgacgatgatggtg 79
            ||||||||||||||||||||
Sbjct: 3297 tcttagtgacgatgatggtg 3278
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>gb|AC154885.8| Mus musculus chromosome 5, clone RP24-333I1, complete sequence
          Length = 176471

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   ctaaattaggccgtaaagtt 56
            ||||||||||||||||||||
Sbjct: 1282 ctaaattaggccgtaaagtt 1301
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>gb|AC162173.4| Mus musculus chromosome 1, clone RP23-447B9, complete sequence
          Length = 169355

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 195    ctctttcttcttcttgttgt 214
              ||||||||||||||||||||
Sbjct: 114064 ctctttcttcttcttgttgt 114083
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 93       gatcggtgatggcattttgt 112
                ||||||||||||||||||||
Sbjct: 12532810 gatcggtgatggcattttgt 12532829
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>gb|AC134459.4| Mus musculus BAC clone RP23-360L15 from chromosome 8, complete sequence
          Length = 211773

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 423    gcatttgccaccaggcccag 442
              ||||||||||||||||||||
Sbjct: 173523 gcatttgccaccaggcccag 173542
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>gb|AC115073.9| Mus musculus chromosome 8, clone RP24-417J18, complete sequence
          Length = 161625

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 423   gcatttgccaccaggcccag 442
             ||||||||||||||||||||
Sbjct: 33199 gcatttgccaccaggcccag 33218
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>gb|AC115116.6| Mus musculus BAC clone RP23-62I3 from chromosome 1, complete sequence
          Length = 231896

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 195    ctctttcttcttcttgttgt 214
              ||||||||||||||||||||
Sbjct: 218025 ctctttcttcttcttgttgt 218006
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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 334    cggcggcaccggcctgctgatcgg 357
              |||||||| |||||||||||||||
Sbjct: 648811 cggcggcatcggcctgctgatcgg 648834
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>gb|AC093513.3| Homo sapiens chromosome 16 clone CTD-2517G10, complete sequence
          Length = 72483

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 362   ccgggcggccgtcgacgcga 381
             ||||||||||||||||||||
Sbjct: 71223 ccgggcggccgtcgacgcga 71204
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>emb|BX088589.14| Zebrafish DNA sequence from clone DKEY-27E7 in linkage group 12,
             complete sequence
          Length = 242558

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   ttaatgccatgccagcaaca 131
             ||||||||||||||||||||
Sbjct: 82353 ttaatgccatgccagcaaca 82334
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>emb|Z93382.1|CEF45G2 Caenorhabditis elegans Cosmid F45G2, complete sequence
          Length = 36309

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 93   gatcggtgatggcattttgt 112
            ||||||||||||||||||||
Sbjct: 3083 gatcggtgatggcattttgt 3064
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>ref|XM_501889.1| Yarrowia lipolytica CLIB122, YALI0C16027g predicted mRNA
          Length = 648

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 397 caggtgcctgccgaggaggaggat 420
           ||||||||||| ||||||||||||
Sbjct: 577 caggtgcctgctgaggaggaggat 600
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 326     cgaaccggcggcggcaccgg 345
               ||||||||||||||||||||
Sbjct: 1938845 cgaaccggcggcggcaccgg 1938864
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>gb|AC134885.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1125B03,
             from chromosome 3, complete sequence
          Length = 124550

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    gatcggtgatggcattttgt 112
             ||||||||||||||||||||
Sbjct: 55131 gatcggtgatggcattttgt 55112
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>emb|X61084.1|CGRHOD C.griseus rhodopsin gene for opsin protein
          Length = 11931

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 380  gatcttgagctccaggtcag 399
            ||||||||||||||||||||
Sbjct: 9977 gatcttgagctccaggtcag 9996
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>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16
          Length = 349442

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 334    cggcggcaccggcctgctgatcgg 357
              |||||||| |||||||||||||||
Sbjct: 297740 cggcggcatcggcctgctgatcgg 297763
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>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14
          Length = 346301

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 334    cggcggcaccggcctgctgatcgg 357
              |||||||| |||||||||||||||
Sbjct: 266249 cggcggcatcggcctgctgatcgg 266272
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>emb|BX640413.1| Bordetella pertussis strain Tohama I, complete genome; segment 3/12
          Length = 349028

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 334    cggcggcaccggcctgctgatcgg 357
              |||||||| |||||||||||||||
Sbjct: 263930 cggcggcatcggcctgctgatcgg 263907
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>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29
          Length = 296500

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 306   ggcgtcctcggcgacggcgacgaa 329
             ||||||||||||| ||||||||||
Sbjct: 53642 ggcgtcctcggcggcggcgacgaa 53619
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>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29
          Length = 313800

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 310    tcctcggcgacggcgacgaa 329
              ||||||||||||||||||||
Sbjct: 190544 tcctcggcgacggcgacgaa 190563
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>emb|AL136591.1|HSM801565 Homo sapiens mRNA; cDNA DKFZp761G122 (from clone DKFZp761G122)
          Length = 4285

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 60   tcttagtgacgatgatggtg 79
            ||||||||||||||||||||
Sbjct: 3297 tcttagtgacgatgatggtg 3278
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>gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0030D15, from chromosome 3, complete sequence
          Length = 151972

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 93     gatcggtgatggcattttgt 112
              ||||||||||||||||||||
Sbjct: 144179 gatcggtgatggcattttgt 144160
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>gb|AC084217.7| Mus Musculus Strain C57BL6/J Chromosome 5 RP23-327P24, complete
             sequence
          Length = 216988

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    ctaaattaggccgtaaagtt 56
             ||||||||||||||||||||
Sbjct: 14910 ctaaattaggccgtaaagtt 14891
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>ref|XM_939689.1| PREDICTED: Homo sapiens neuropeptide W (NPW), mRNA
          Length = 823

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 362 ccgggcggccgtcgacgcga 381
           ||||||||||||||||||||
Sbjct: 171 ccgggcggccgtcgacgcga 190
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>ref|XM_496111.2| PREDICTED: Homo sapiens neuropeptide W (NPW), mRNA
          Length = 823

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 362 ccgggcggccgtcgacgcga 381
           ||||||||||||||||||||
Sbjct: 171 ccgggcggccgtcgacgcga 190
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 317     cgacggcgacgaaccggcgg 336
               ||||||||||||||||||||
Sbjct: 1597432 cgacggcgacgaaccggcgg 1597413
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 517     gcgccgcgtccggcctcggc 536
               ||||||||||||||||||||
Sbjct: 2607868 gcgccgcgtccggcctcggc 2607849
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>gb|DQ067263.1| Kocuria rosea maltooligosyl trehalose synthase (treY) gene, partial
           cds
          Length = 2100

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 304 agggcgtcctcggcgacggc 323
           ||||||||||||||||||||
Sbjct: 827 agggcgtcctcggcgacggc 808
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 317     cgacggcgacgaaccggcggcggc 340
               |||||||||||| |||||||||||
Sbjct: 6121741 cgacggcgacgatccggcggcggc 6121764
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 317      cgacggcgacgaaccggcggcggc 340
                |||||||||||| |||||||||||
Sbjct: 17237291 cgacggcgacgatccggcggcggc 17237268
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/31 (93%), Gaps = 2/31 (6%)
 Strand = Plus / Minus

                                               
Query: 314      cggcgacggcgacg--aaccggcggcggcac 342
                ||||||||||||||  |||||||||||||||
Sbjct: 13315154 cggcgacggcgacggcaaccggcggcggcac 13315124
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 93       gatcggtgatggcattttgt 112
                ||||||||||||||||||||
Sbjct: 12529573 gatcggtgatggcattttgt 12529592
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>gb|AC154574.2| Mus musculus BAC clone RP23-399K3 from chromosome 14, complete sequence
          Length = 180263

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 195    ctctttcttcttcttgttgt 214
              ||||||||||||||||||||
Sbjct: 141756 ctctttcttcttcttgttgt 141737
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>gb|AC008176.3|AC008176 Homo sapiens BAC clone RP11-451F11 from 7p11.2-p21, complete sequence
          Length = 90180

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   aggctctttcttcttcttgt 211
             ||||||||||||||||||||
Sbjct: 27894 aggctctttcttcttcttgt 27913
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>gb|AC114272.4| Homo sapiens chromosome 19 clone LLNLR_296F4, complete sequence
          Length = 11699

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 423 gcatttgccaccaggcccag 442
           ||||||||||||||||||||
Sbjct: 616 gcatttgccaccaggcccag 597
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 314     cggcgacggcgacgaaccggcggc 337
               ||||||||||||||| ||||||||
Sbjct: 5999468 cggcgacggcgacgatccggcggc 5999445
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>dbj|AP005692.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0055N01
          Length = 154783

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/31 (93%), Gaps = 2/31 (6%)
 Strand = Plus / Minus

                                             
Query: 314    cggcgacggcgacg--aaccggcggcggcac 342
              ||||||||||||||  |||||||||||||||
Sbjct: 136588 cggcgacggcgacggcaaccggcggcggcac 136558
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>gb|AE005126.1| Halobacterium sp. NRC-1 section 157 of 170 of the complete genome
          Length = 10575

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 317  cgacggcgacgaaccggcgg 336
            ||||||||||||||||||||
Sbjct: 4376 cgacggcgacgaaccggcgg 4357
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>ref|XM_321208.2| Anopheles gambiae str. PEST ENSANGP00000020095
           (ENSANGG00000017606), partial mRNA
          Length = 1515

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 337 cggcaccggcctgctgatcg 356
           ||||||||||||||||||||
Sbjct: 336 cggcaccggcctgctgatcg 355
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>emb|CR405682.23| Zebrafish DNA sequence from clone DKEYP-67E6 in linkage group 12,
              complete sequence
          Length = 192457

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 112    ttaatgccatgccagcaaca 131
              ||||||||||||||||||||
Sbjct: 137183 ttaatgccatgccagcaaca 137164
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 336     gcggcaccggcctgctgatc 355
               ||||||||||||||||||||
Sbjct: 2123125 gcggcaccggcctgctgatc 2123144
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>gb|AC154614.3| Mus musculus BAC clone RP23-255I2 from chromosome 14, complete sequence
          Length = 186187

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   ctctttcttcttcttgttgt 214
             ||||||||||||||||||||
Sbjct: 12472 ctctttcttcttcttgttgt 12453
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 317      cgacggcgacgaaccggcggcggc 340
                |||||||||||| |||||||||||
Sbjct: 17332477 cgacggcgacgatccggcggcggc 17332454
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 317     cgacggcgacgaaccggcggcggc 340
               |||||||||||| |||||||||||
Sbjct: 6121643 cgacggcgacgatccggcggcggc 6121666
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>emb|BX664712.3|CNS09SC2 Oryza sativa chromosome 12, . BAC B1373G08 of chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 131531

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 317   cgacggcgacgaaccggcggcggc 340
             |||||||||||| |||||||||||
Sbjct: 18750 cgacggcgacgatccggcggcggc 18773
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>dbj|AB084276.1| Homo sapiens prepro-NPW mRNA for prepro-Neuropeptide W polypeptide,
           partial cds
          Length = 719

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 362 ccgggcggccgtcgacgcga 381
           ||||||||||||||||||||
Sbjct: 138 ccgggcggccgtcgacgcga 157
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>emb|AL929467.6| Zebrafish DNA sequence from clone CH211-148E17, complete sequence
          Length = 156801

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 112  ttaatgccatgccagcaaca 131
            ||||||||||||||||||||
Sbjct: 3606 ttaatgccatgccagcaaca 3625
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>gb|AC142099.3| Mus musculus BAC clone RP24-350H4 from 6, complete sequence
          Length = 167731

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 380   gatcttgagctccaggtcag 399
             ||||||||||||||||||||
Sbjct: 17982 gatcttgagctccaggtcag 17963
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>gb|AC139320.4| Mus musculus BAC clone RP24-410G8 from 9, complete sequence
          Length = 176888

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 430   ccaccaggcccagggaaggaggga 453
             |||||||||||||| |||||||||
Sbjct: 87211 ccaccaggcccaggcaaggaggga 87234
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>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 397     caggtgcctgccgaggaggaggat 420
               ||||||||||| ||||||||||||
Sbjct: 2276283 caggtgcctgctgaggaggaggat 2276306
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>gb|AC004030.2| Homo sapiens DNA from chromosome 19, cosmid F21856, complete sequence
          Length = 37631

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 423   gcatttgccaccaggcccag 442
             ||||||||||||||||||||
Sbjct: 35482 gcatttgccaccaggcccag 35463
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>gb|M55171.1|MUSOPS Mouse opsin (MOPS) gene, complete cds
          Length = 9483

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 380  gatcttgagctccaggtcag 399
            ||||||||||||||||||||
Sbjct: 5317 gatcttgagctccaggtcag 5336
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>emb|AL365521.1|HST000257 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 2522007
          Length = 564

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 362 ccgggcggccgtcgacgcga 381
           ||||||||||||||||||||
Sbjct: 333 ccgggcggccgtcgacgcga 352
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>emb|AL355177.14| Mouse DNA sequence from clone RP21-61H21 on chromosome 5, complete
              sequence
          Length = 134781

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 37     ctaaattaggccgtaaagtt 56
              ||||||||||||||||||||
Sbjct: 119891 ctaaattaggccgtaaagtt 119910


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,501,645
Number of Sequences: 3902068
Number of extensions: 6501645
Number of successful extensions: 161693
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 158296
Number of HSP's gapped (non-prelim): 3412
length of query: 655
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 632
effective length of database: 17,143,297,704
effective search space: 10834564148928
effective search space used: 10834564148928
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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