>UVRA_CLOPE (Q8XNI5) UvrABC system protein A (UvrA protein) (Excinuclease ABC|
           subunit A)
          Length = 939

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
 Frame = -1

Query: 341 DVMILVSIVQPLLEEINAILV-KHQLDMLKC 252
           DV  LV I+Q L++  N ++V +H LDM+KC
Sbjct: 866 DVNRLVKILQRLVDGGNTVIVIEHNLDMIKC 896

>DRI_DROME (Q24573) Protein dead ringer (Protein retained)|
          Length = 911

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 29  YDTSNPLQLQGHKHIQQRHL*QLNKKGVWNQP 124
           +D S P Q+ GH H Q  HL + +   + N P
Sbjct: 695 HDDSEPQQMNGHHHHQTHHLDKSDDSAIENSP 726

>GLUD1_MOUSE (Q8CIX8) Glutamate--ammonia ligase domain-containing protein 1|
           (Lengsin) (Lens glutamine synthase-like)
          Length = 563

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +3

Query: 18  QISSMIHPTHYNYKGTNTYSKDISDSLTKRESGTNHQQFLKETPTNLHFTMQARLI 185
           + S    PT YN +  N           K+E   NH QF++   T+LH   +++ I
Sbjct: 103 EFSPNTDPTRYNAQSFNPPQLSARMKHIKQEMAKNHLQFVRFEATDLHGVSRSKSI 158

>TRMU_LACAC (Q5FKU0) Probable tRNA|
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           (EC 2.1.1.61)
          Length = 375

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = -3

Query: 336 HDIGLHCTASARGDQCHFG*TPAGHA 259
           HD  +HCTA  R  QC  G T   HA
Sbjct: 301 HDFEMHCTAKFRYRQCDIGVTVKYHA 326


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,735,289
Number of Sequences: 219361
Number of extensions: 1553111
Number of successful extensions: 3161
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3161
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4986986160
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)