>PAO_ARATH (Q9FYC2) Pheophorbide a oxygenase, chloroplast precursor (EC|
           1.-.-.-) (Pheide a oxygenase) (AtPaO) (Accelerated cell
           death 1) (Lethal leaf-spot 1 homolog) (Lls1)
          Length = 537

 Score = 80.5 bits (197), Expect = 4e-15
 Identities = 53/140 (37%), Positives = 74/140 (52%), Gaps = 3/140 (2%)
 Frame = -2

Query: 640 ENWQKAVYVPTSSDNMVIAFRNWFRKHCKSQVGW--AAPTIGQLPETP-TKDKLMERYWS 470
           + + K  + PT +D  V+AFRNW R+H KSQ  W  + P+   LP T  TK ++++R+  
Sbjct: 401 KQYTKLTFTPTQADRFVLAFRNWLRRHGKSQPEWFGSTPSNQPLPSTVLTKRQMLDRFDQ 460

Query: 469 HVAQCRSCSTALKTMKALEVALQVASVAVVGFLAVAKGTLVTSVVQRAAVVTLAVLCFAA 290
           H   C SC  A  + + L+  L  A+V    F A   G  V S VQ   V+    L  AA
Sbjct: 461 HTQVCSSCKGAYNSFQILKKFLVGATV----FWAATAG--VPSDVQIRLVLAGLSLISAA 514

Query: 289 SRWLASFIEKNFYFQDYVHA 230
           S +     EKNF F+DYVH+
Sbjct: 515 SAYALHEQEKNFVFRDYVHS 534

>MYO2_CAEEL (P12845) Myosin-2 (Myosin heavy chain C) (MHC C)|
          Length = 1947

 Score = 35.4 bits (80), Expect = 0.15
 Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
 Frame = -1

Query: 641  RKLAESRVRADVVGQHGDRLQELVQKALQESGRLGRPDDRS-VTRDSNQRQAHGEVLVAR 465
            +KL E    A+      ++L+  + ++L++S +    + R+    D N+R+A GE+ +A+
Sbjct: 1020 KKLTEDLQAAEEQNLAANKLKAKLMQSLEDSEQTMEREKRNRADMDKNKRKAEGELKIAQ 1079

Query: 464  RAVQELQHGAEDHESA 417
              ++EL     D E+A
Sbjct: 1080 ETLEELNKSKSDAENA 1095

>RECX_DEIRA (Q9RUS2) Regulatory protein recX|
          Length = 204

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 22/72 (30%), Positives = 38/72 (52%)
 Frame = -1

Query: 647 GRRKLAESRVRADVVGQHGDRLQELVQKALQESGRLGRPDDRSVTRDSNQRQAHGEVLVA 468
           G R + E+ +R  +  +  D   ELV++ L+    LG  +D  V R  N+R+  GE+ V 
Sbjct: 65  GARAITEAELRGKLERRSED--PELVEEVLRRVQELGYQNDAEVARAENKRRGVGELRV- 121

Query: 467 RRAVQELQHGAE 432
           R+ ++    GA+
Sbjct: 122 RQTLRRRGLGAD 133

>OR6A2_HUMAN (O95222) Olfactory receptor 6A2 (Olfactory receptor 11-55)|
           (OR11-55) (hP2 olfactory receptor)
          Length = 327

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = -2

Query: 145 STLLYLIPIVAVYKATSLFSLFKPKPSSDFHSNQCVNAIYA 23
           ST    + +V ++ A S+F   +PK  S F +N+ V+ +YA
Sbjct: 244 STCASHLTVVIIFYAASIFIYARPKALSAFDTNKLVSVLYA 284

>OL226_RAT (P23270) Olfactory receptor 226 (Olfactory receptor-like protein|
           I7)
          Length = 327

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = -2

Query: 145 STLLYLIPIVAVYKATSLFSLFKPKPSSDFHSNQCVNAIYA 23
           ST    + +V ++ A S+F   +PK  S F +N+ V+ +YA
Sbjct: 244 STCASHLTVVIIFYAASIFIYARPKALSAFDTNKLVSVLYA 284

>P2RY8_HUMAN (Q86VZ1) P2Y purinoceptor 8 (P2Y8)|
          Length = 359

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
 Frame = -2

Query: 328 AAVVTLA-VLCFAASRW--LASFIEKNFYFQDYVHAYK 224
           AAVV LA V CFA + +  LA  + + FY + Y H YK
Sbjct: 239 AAVVLLAFVTCFAPNNFVLLAHIVSRLFYGKSYYHVYK 276

>ZN407_HUMAN (Q9C0G0) Zinc finger protein 407 (Fragment)|
          Length = 1165

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 8/115 (6%)
 Frame = +2

Query: 158 SKAASAQELQNPNNGRRMIWPSLVGMDVILEIEVLLDEAGEPAGRGEAQHRQCHDGGSLH 337
           S   S    QN N+G      S +  +   +   + ++AGE     E +     DGG + 
Sbjct: 107 SNYGSPSRFQNENSGS-----SALNCETAKKNHEISNDAGELRVHCEGEGGNAGDGGGVV 161

Query: 338 DRRH*CPL---GDRKETD-----DRHRRDLQGNLQRFHGLQRRAAAPALRDVRPV 478
             RH CP+   G+R          R  R+ QGNL+   G  R A    L D++ V
Sbjct: 162 PHRHLCPVTLDGERSAESPVLVVTRITRE-QGNLES-GGQNRVARGHGLEDLKGV 214

>TOP1_STRCO (Q9X909) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
            (Omega-protein) (Relaxing enzyme) (Untwisting enzyme)
            (Swivelase)
          Length = 952

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = +3

Query: 270  KLASQRDAAKHSTANVTTAALCTTDVTSVPLATARKPTTATDATCRATSS 419
            K A+++  AK + A   TAA  TT        +  K TTA  A  +AT+S
Sbjct: 898  KTAAKKAPAKKAAATKKTAAAKTTAAKKTAAKSTAKKTTAKTAAKKATAS 947


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,373,975
Number of Sequences: 219361
Number of extensions: 1414962
Number of successful extensions: 4543
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4540
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6086476506
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)