ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal18g10 |
|---|---|
| Clone Library Name | barley_pub |
>IF2B_WHEAT (O24473) Eukaryotic translation initiation factor 2 beta subunit| (eIF-2-beta) (P38) Length = 270 Score = 175 bits (443), Expect = 3e-44 Identities = 87/92 (94%), Positives = 88/92 (95%) Frame = -1 Query: 404 MFXHAEMGTSXSLXGQQRLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTILSKENRL 225 MF AEMGTS SL GQQRLVIKGRFAPKNFEAILRRYINEYVIC+GCKSPDTILSKENRL Sbjct: 179 MFLLAEMGTSGSLDGQQRLVIKGRFAPKNFEAILRRYINEYVICHGCKSPDTILSKENRL 238 Query: 224 FFLRCEQCGSSRSVAPIKAGFVAQVGRRKAGT 129 FFLRCEQCGSSRSVAPIKAGFVAQVGRRKAGT Sbjct: 239 FFLRCEQCGSSRSVAPIKAGFVAQVGRRKAGT 270
>IF2B_MALDO (P55871) Eukaryotic translation initiation factor 2 beta subunit| (eIF-2-beta) Length = 271 Score = 156 bits (394), Expect = 1e-38 Identities = 75/91 (82%), Positives = 82/91 (90%) Frame = -1 Query: 401 FXHAEMGTSXSLXGQQRLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTILSKENRLF 222 F AE+GTS SL GQQRLV+KGRFAPKNFE ILRRY+NEYVIC GC+SPDTILSKENRLF Sbjct: 181 FLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCQSPDTILSKENRLF 240 Query: 221 FLRCEQCGSSRSVAPIKAGFVAQVGRRKAGT 129 FLRCE+CGS RSVAP KAGF+A+VGRR AGT Sbjct: 241 FLRCEKCGSGRSVAPNKAGFMARVGRRNAGT 271
>IF2B_ARATH (Q41969) Eukaryotic translation initiation factor 2 beta subunit| (eIF-2-beta) Length = 268 Score = 150 bits (378), Expect = 9e-37 Identities = 72/85 (84%), Positives = 77/85 (90%) Frame = -1 Query: 392 AEMGTSXSLXGQQRLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTILSKENRLFFLR 213 AE+GTS SL GQQRLV+KGRFAPKNFE ILRRYI +YVIC GCKSPDTILSKENRLFFLR Sbjct: 183 AELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYITDYVICLGCKSPDTILSKENRLFFLR 242 Query: 212 CEQCGSSRSVAPIKAGFVAQVGRRK 138 CE+CGS RSVAPIK GFVA+V RRK Sbjct: 243 CEKCGSQRSVAPIKTGFVARVSRRK 267
>IF2B_SCHPO (P56329) Probable eukaryotic translation initiation factor 2 beta| subunit (eIF-2-beta) Length = 321 Score = 119 bits (298), Expect = 2e-27 Identities = 56/88 (63%), Positives = 66/88 (75%) Frame = -1 Query: 401 FXHAEMGTSXSLXGQQRLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTILSKENRLF 222 F AE+GTS S+ G RL+IKGRF K E +LRRYI EYV C CKSPDTIL+KENR+F Sbjct: 231 FLFAELGTSGSVDGSSRLIIKGRFQQKQIENVLRRYIVEYVTCKTCKSPDTILTKENRIF 290 Query: 221 FLRCEQCGSSRSVAPIKAGFVAQVGRRK 138 F+ CE CGS RSV IK G+ AQ+G+RK Sbjct: 291 FMTCEACGSVRSVQAIKTGYQAQIGKRK 318
>IF2B_DROME (P41375) Eukaryotic translation initiation factor 2 beta subunit| (eIF-2-beta) Length = 312 Score = 116 bits (290), Expect = 1e-26 Identities = 55/89 (61%), Positives = 67/89 (75%) Frame = -1 Query: 401 FXHAEMGTSXSLXGQQRLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTILSKENRLF 222 F AE+GTS S+ G Q+L+IKGRF PK E +LRRYI EYV C+ C+SP+TIL K+ RLF Sbjct: 218 FLLAELGTSGSMDGNQQLIIKGRFQPKQIENVLRRYIKEYVTCHTCRSPETILQKDTRLF 277 Query: 221 FLRCEQCGSSRSVAPIKAGFVAQVGRRKA 135 FL+CE CGS SVA IK+GF A G+R A Sbjct: 278 FLQCESCGSRCSVASIKSGFQAVTGKRAA 306
>IF2B_RABIT (P41035) Eukaryotic translation initiation factor 2 subunit 2| (Eukaryotic translation initiation factor 2 beta subunit) (eIF-2-beta) Length = 333 Score = 107 bits (266), Expect = 9e-24 Identities = 52/87 (59%), Positives = 62/87 (71%) Frame = -1 Query: 401 FXHAEMGTSXSLXGQQRLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTILSKENRLF 222 F AE+GTS S+ G +LVIKGRF K E +LRRYI EYV C+ C+SPDTIL K+ RL+ Sbjct: 239 FLLAELGTSGSIDGNNQLVIKGRFQQKQIENVLRRYIKEYVTCHTCRSPDTILQKDTRLY 298 Query: 221 FLRCEQCGSSRSVAPIKAGFVAQVGRR 141 FL+CE C S SVA IK GF A G+R Sbjct: 299 FLQCETCHSRCSVASIKTGFQAVTGKR 325
>IF2B_HUMAN (P20042) Eukaryotic translation initiation factor 2 subunit 2| (Eukaryotic translation initiation factor 2 beta subunit) (eIF-2-beta) Length = 333 Score = 107 bits (266), Expect = 9e-24 Identities = 52/87 (59%), Positives = 62/87 (71%) Frame = -1 Query: 401 FXHAEMGTSXSLXGQQRLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTILSKENRLF 222 F AE+GTS S+ G +LVIKGRF K E +LRRYI EYV C+ C+SPDTIL K+ RL+ Sbjct: 239 FLLAELGTSGSIDGNNQLVIKGRFQQKQIENVLRRYIKEYVTCHTCRSPDTILQKDTRLY 298 Query: 221 FLRCEQCGSSRSVAPIKAGFVAQVGRR 141 FL+CE C S SVA IK GF A G+R Sbjct: 299 FLQCETCHSRCSVASIKTGFQAVTGKR 325
>IF2B_MOUSE (Q99L45) Eukaryotic translation initiation factor 2 subunit 2| (Eukaryotic translation initiation factor 2 beta subunit) (eIF-2-beta) Length = 331 Score = 107 bits (266), Expect = 9e-24 Identities = 52/87 (59%), Positives = 62/87 (71%) Frame = -1 Query: 401 FXHAEMGTSXSLXGQQRLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTILSKENRLF 222 F AE+GTS S+ G +LVIKGRF K E +LRRYI EYV C+ C+SPDTIL K+ RL+ Sbjct: 237 FLLAELGTSGSIDGNNQLVIKGRFQQKQIENVLRRYIKEYVTCHTCRSPDTILQKDTRLY 296 Query: 221 FLRCEQCGSSRSVAPIKAGFVAQVGRR 141 FL+CE C S SVA IK GF A G+R Sbjct: 297 FLQCETCHSRCSVASIKTGFQAVTGKR 323
>IF2B_CAEEL (Q21230) Putative eukaryotic translation initiation factor 2 beta| subunit (eIF-2-beta) Length = 250 Score = 105 bits (263), Expect = 2e-23 Identities = 49/89 (55%), Positives = 66/89 (74%) Frame = -1 Query: 401 FXHAEMGTSXSLXGQQRLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTILSKENRLF 222 F AE+GT+ S+ G L++KGR+ K FE++LR+YI EYV+C+ CKSP+T L+K+ RLF Sbjct: 151 FLLAELGTTGSIDGSNCLIVKGRWQQKQFESVLRKYIKEYVMCHTCKSPETQLTKDTRLF 210 Query: 221 FLRCEQCGSSRSVAPIKAGFVAQVGRRKA 135 FL+C CGS SV IK+GF A VG+R A Sbjct: 211 FLQCTNCGSRCSVTAIKSGFKAVVGKRAA 239
>IF2B_YEAST (P09064) Eukaryotic translation initiation factor 2 beta subunit| (eIF-2-beta) Length = 285 Score = 103 bits (257), Expect = 1e-22 Identities = 52/90 (57%), Positives = 66/90 (73%), Gaps = 2/90 (2%) Frame = -1 Query: 401 FXHAEMGTSXSLXGQQRLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTILSKE--NR 228 + AE+GTS S+ GQ+RLVIKG+F K E +LRRYI EYV C CKS +T L +E NR Sbjct: 194 YLFAELGTSGSVDGQKRLVIKGKFQSKQMENVLRRYILEYVTCKTCKSINTELKREQSNR 253 Query: 227 LFFLRCEQCGSSRSVAPIKAGFVAQVGRRK 138 LFF+ C+ CGS+RSV+ IK GF A VG+R+ Sbjct: 254 LFFMVCKSCGSTRSVSSIKTGFQATVGKRR 283
>IF2B_PYRHO (O58312) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 140 Score = 67.0 bits (162), Expect = 1e-11 Identities = 32/73 (43%), Positives = 47/73 (64%) Frame = -1 Query: 401 FXHAEMGTSXSLXGQQRLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTILSKENRLF 222 F E+ T+ +L G+ R+V++GRF P L++YI EYVIC C SPDT + K +R + Sbjct: 66 FLLREIATAGTLEGK-RVVLQGRFTPYLIANKLKKYIKEYVICPVCGSPDTKIIKRDRFY 124 Query: 221 FLRCEQCGSSRSV 183 FL+CE CG+ + Sbjct: 125 FLKCEACGAETPI 137
>IF2B_PYRAB (Q9UYR6) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 140 Score = 66.2 bits (160), Expect = 2e-11 Identities = 31/73 (42%), Positives = 47/73 (64%) Frame = -1 Query: 401 FXHAEMGTSXSLXGQQRLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTILSKENRLF 222 F E+ T+ +L G+ R+V++GRF P +++YI EYVIC C SPDT + K +R + Sbjct: 66 FLLREIATAGTLEGK-RVVLQGRFTPYLIANKIKKYIKEYVICPVCGSPDTKIIKRDRFY 124 Query: 221 FLRCEQCGSSRSV 183 FL+CE CG+ + Sbjct: 125 FLKCEACGAETPI 137
>IF2B_PYRFU (Q8U3I5) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 140 Score = 65.5 bits (158), Expect = 3e-11 Identities = 32/73 (43%), Positives = 46/73 (63%) Frame = -1 Query: 401 FXHAEMGTSXSLXGQQRLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTILSKENRLF 222 F E+ T+ +L G+ R+V++GRF P L++YI EYVIC C SPDT + K +R Sbjct: 66 FLLREIATAGTLEGR-RVVLQGRFTPYLIANKLKKYIKEYVICPVCGSPDTKIIKRDRFH 124 Query: 221 FLRCEQCGSSRSV 183 FL+CE CG+ + Sbjct: 125 FLKCEACGAETPI 137
>IF2B_METMP (Q6M0H3) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 138 Score = 62.4 bits (150), Expect = 2e-10 Identities = 27/69 (39%), Positives = 44/69 (63%) Frame = -1 Query: 389 EMGTSXSLXGQQRLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTILSKENRLFFLRC 210 E+GT+ + G RL+++G+F + ++ Y+NEYV+C C PDT + KE R+ FL+C Sbjct: 68 ELGTAGDMEGV-RLILQGKFGWRMVNEKIQNYVNEYVLCPECGKPDTKIVKEGRIHFLKC 126 Query: 209 EQCGSSRSV 183 CG+ + V Sbjct: 127 TACGAMKPV 135
>IF2B_METKA (Q8TWR5) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 138 Score = 62.0 bits (149), Expect = 3e-10 Identities = 30/73 (41%), Positives = 46/73 (63%) Frame = -1 Query: 389 EMGTSXSLXGQQRLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTILSKENRLFFLRC 210 E+GT+ + G RL++ G + PK E L+ Y+ E+V+C C PDT L +E+R + L+C Sbjct: 67 ELGTAGHVDGG-RLILHGVYHPKLVEEELKNYVEEFVLCPECGKPDTKLVREDRQWILKC 125 Query: 209 EQCGSSRSVAPIK 171 E CG+ SV +K Sbjct: 126 EACGAWSSVRRLK 138
>IF2B_PYRKO (Q5JIT0) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 142 Score = 61.2 bits (147), Expect = 6e-10 Identities = 28/73 (38%), Positives = 45/73 (61%) Frame = -1 Query: 401 FXHAEMGTSXSLXGQQRLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTILSKENRLF 222 F E+ T+ +L G+ R +++GRF P +++Y+ E+VIC C SPDT + K+ R Sbjct: 68 FILREVATAGTLEGR-RAILQGRFTPYLIANKMKKYLKEFVICPVCGSPDTKIIKKGRFH 126 Query: 221 FLRCEQCGSSRSV 183 FL+CE CG+ + Sbjct: 127 FLKCEACGAETPI 139
>IF2B_SULTO (Q974Z6) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 139 Score = 58.9 bits (141), Expect = 3e-09 Identities = 26/76 (34%), Positives = 44/76 (57%) Frame = -1 Query: 401 FXHAEMGTSXSLXGQQRLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTILSKENRLF 222 F E+ ++ +LVI+G+F+ + I+ R+I YV C+ CKS DT+L KE + + Sbjct: 64 FILKELAAPGNVDENGQLVIQGKFSSASINKIMERFIKTYVQCSTCKSLDTVLIKEKKAW 123 Query: 221 FLRCEQCGSSRSVAPI 174 ++ C CG+ V P+ Sbjct: 124 YISCLACGAKTPVKPL 139
>IF2B_PYRAE (Q8ZXA6) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 134 Score = 58.9 bits (141), Expect = 3e-09 Identities = 30/76 (39%), Positives = 41/76 (53%) Frame = -1 Query: 401 FXHAEMGTSXSLXGQQRLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTILSKENRLF 222 F E+ +L G + G +PK EA+ R+I YV+C C S DT L KE R+F Sbjct: 60 FFQKELAVPGTLEGDV-FTLHGEKSPKVVEAVYDRFIRYYVVCPVCNSIDTELRKEGRIF 118 Query: 221 FLRCEQCGSSRSVAPI 174 +RC CG+S V P+ Sbjct: 119 IMRCLACGASTPVRPL 134
>IF2B_METMA (Q8PWV1) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 202 Score = 58.2 bits (139), Expect = 5e-09 Identities = 31/85 (36%), Positives = 49/85 (57%) Frame = -1 Query: 389 EMGTSXSLXGQQRLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTILSKENRLFFLRC 210 E+GT+ + G R V +GRF ++ Y++EYV+C+ C PDT L + +R+ L+C Sbjct: 65 ELGTAGKIEGT-RAVFQGRFTRAQLSDNIQAYVDEYVMCSECGRPDTQLVRVDRVLVLKC 123 Query: 209 EQCGSSRSVAPIKAGFVAQVGRRKA 135 CG+ R P+K V+ V R+A Sbjct: 124 SACGAHR---PVKKRKVSNVVVREA 145
>IF2B_METTH (O27797) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 135 Score = 57.4 bits (137), Expect = 8e-09 Identities = 28/77 (36%), Positives = 46/77 (59%) Frame = -1 Query: 401 FXHAEMGTSXSLXGQQRLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTILSKENRLF 222 F E+GT+ +L G R +++G+F + Y+N++VIC+ C PDT + +E R+ Sbjct: 61 FLLRELGTAGNLEGG-RAILQGKFTHFLINERIEDYVNKFVICHECNRPDTRIIREGRIS 119 Query: 221 FLRCEQCGSSRSVAPIK 171 L+CE CG+ AP+K Sbjct: 120 LLKCEACGAK---APLK 133
>IF2B_METAC (Q8TU91) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 202 Score = 57.4 bits (137), Expect = 8e-09 Identities = 31/85 (36%), Positives = 48/85 (56%) Frame = -1 Query: 389 EMGTSXSLXGQQRLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTILSKENRLFFLRC 210 E+GT+ + G R V +GRF ++ Y++EYV+C+ C PDT L + +R+ L+C Sbjct: 65 ELGTAGKIEGT-RAVFQGRFTRAQISDNIQAYVDEYVMCSECGRPDTQLVRVDRVLVLKC 123 Query: 209 EQCGSSRSVAPIKAGFVAQVGRRKA 135 CG+ R P+K V+ V R A Sbjct: 124 SACGAHR---PVKKRKVSNVVVRDA 145
>IF2B_SULSO (Q97W59) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 139 Score = 57.0 bits (136), Expect = 1e-08 Identities = 24/72 (33%), Positives = 43/72 (59%) Frame = -1 Query: 389 EMGTSXSLXGQQRLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTILSKENRLFFLRC 210 E+ ++ + LVI+G+F+ + ++ R++ YV C+ CKS DTIL KE + +++ C Sbjct: 68 ELAAPGNVDDKGELVIQGKFSSQVINTLMERFLKAYVECSTCKSLDTILKKEKKSWYIVC 127 Query: 209 EQCGSSRSVAPI 174 CG+ V P+ Sbjct: 128 LACGAQTPVKPL 139
>IF2B_HALMA (Q5V323) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 134 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/69 (36%), Positives = 38/69 (55%) Frame = -1 Query: 401 FXHAEMGTSXSLXGQQRLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTILSKENRLF 222 F ++GTS + R+ + G F EA + Y++E+V+C+ C PDT L +E Sbjct: 60 FLQNDLGTSGHIDESGRVRLTGEFDATRIEASIDEYVDEFVLCSECGLPDTQLEREQGAL 119 Query: 221 FLRCEQCGS 195 LRCE CG+ Sbjct: 120 LLRCEACGA 128
>IF2B_METJA (Q57562) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 143 Score = 55.8 bits (133), Expect = 2e-08 Identities = 26/72 (36%), Positives = 44/72 (61%) Frame = -1 Query: 389 EMGTSXSLXGQQRLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTILSKENRLFFLRC 210 E G++ +L G RL+++ R +P+ ++ + ++ EYVIC C PDT + KE R+ L+C Sbjct: 73 ETGSAGNLEGG-RLILQRRISPELLKSRINDFLREYVICRECGKPDTKIIKEGRVHLLKC 131 Query: 209 EQCGSSRSVAPI 174 CG+ R + I Sbjct: 132 MACGAIRPIRMI 143
>IF2B_ARCFU (O27958) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 137 Score = 53.5 bits (127), Expect = 1e-07 Identities = 24/60 (40%), Positives = 33/60 (55%) Frame = -1 Query: 353 RLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTILSKENRLFFLRCEQCGSSRSVAPI 174 RLV++G+F + + Y+ YV+C C SPDT KE R+ LRC CG+ V I Sbjct: 78 RLVLQGKFTESELQKEVDDYVRLYVLCRECNSPDTEFIKEERVLMLRCLACGAKHPVRNI 137
>IF2B_PICTO (Q6L0E6) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 205 Score = 52.4 bits (124), Expect = 3e-07 Identities = 25/69 (36%), Positives = 37/69 (53%) Frame = -1 Query: 389 EMGTSXSLXGQQRLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTILSKENRLFFLRC 210 E G L GQ RL+I + + ++ + Y+ YVIC CKSPDT + K R + L C Sbjct: 66 EFGIGAVLSGQ-RLIINRKVSEDEIQSKMNEYMATYVICYECKSPDTEIQKIGRTYLLVC 124 Query: 209 EQCGSSRSV 183 + CG+ + Sbjct: 125 KACGAQHPI 133
>IF2B_SULAC (Q4JA57) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 141 Score = 51.2 bits (121), Expect = 6e-07 Identities = 22/69 (31%), Positives = 41/69 (59%) Frame = -1 Query: 389 EMGTSXSLXGQQRLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTILSKENRLFFLRC 210 E+ SL +LVI+G+F+ + ++ R++ YV C+ C+S DTIL ++ +++ + C Sbjct: 70 ELAAPGSLGENGQLVIQGKFSSQVVTMLMERFLKMYVQCSTCRSFDTILKRDKKVWIISC 129 Query: 209 EQCGSSRSV 183 CG+ V Sbjct: 130 LACGAQTPV 138
>IF2B_HALSA (Q9HQ97) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 132 Score = 49.3 bits (116), Expect = 2e-06 Identities = 25/73 (34%), Positives = 33/73 (45%) Frame = -1 Query: 401 FXHAEMGTSXSLXGQQRLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTILSKENRLF 222 F E+GTS S+ R + G F + L Y+ YV C C PDT L + Sbjct: 60 FLQNEVGTSASIDESGRARLTGEFGQRRVSDTLDAYVETYVTCPECGLPDTNLETDGDTI 119 Query: 221 FLRCEQCGSSRSV 183 L CE CG+ +V Sbjct: 120 QLHCEACGARSTV 132
>IF2B_THEVO (Q97B05) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 208 Score = 47.8 bits (112), Expect = 6e-06 Identities = 25/77 (32%), Positives = 39/77 (50%) Frame = -1 Query: 401 FXHAEMGTSXSLXGQQRLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTILSKENRLF 222 F E+GT+ G+ RL+I + + + + YIN YV C C S DT + K R+ Sbjct: 62 FLTRELGTNIVQNGR-RLIINKKVTLEELQEKMNEYINTYVRCYECGSLDTEIQKSGRVS 120 Query: 221 FLRCEQCGSSRSVAPIK 171 L C+ CG+ + +K Sbjct: 121 LLVCKACGAQHPIHTVK 137
>IF2B_AERPE (Q9YBR6) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 135 Score = 46.2 bits (108), Expect = 2e-05 Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 1/77 (1%) Frame = -1 Query: 401 FXHAEMGTSXSLXGQQ-RLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTILSKENRL 225 + E+ T+ S + +L++ + + K L+ ++ YV C C S DT L ++ R Sbjct: 59 YLQKELATAASYEEESGQLILNVKVSRKVVNQFLQLFMKTYVRCPTCGSIDTKLLRQERA 118 Query: 224 FFLRCEQCGSSRSVAPI 174 + L+CE CG+ + V PI Sbjct: 119 YMLKCEACGAEQPVKPI 135
>IF2B_THEAC (Q9HKJ3) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 209 Score = 44.3 bits (103), Expect = 7e-05 Identities = 24/77 (31%), Positives = 37/77 (48%) Frame = -1 Query: 401 FXHAEMGTSXSLXGQQRLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTILSKENRLF 222 F E GT+ G+ RL+I + + + YIN YV C C S DT + K R+ Sbjct: 62 FLTREFGTNIVQNGR-RLIINRKLTLEELLDKMNEYINTYVRCYECGSLDTEIQKSGRIS 120 Query: 221 FLRCEQCGSSRSVAPIK 171 L C+ CG+ + ++ Sbjct: 121 LLVCKACGAQHPIHSVR 137
>IF2B_NANEQ (Q74M98) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 139 Score = 43.9 bits (102), Expect = 9e-05 Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 1/57 (1%) Frame = -1 Query: 350 LVIKGRFAPKNFEAILRRYINEYVICNGCKSPDT-ILSKENRLFFLRCEQCGSSRSV 183 L+I R + + + L +IN +VIC CK PDT ++ + ++++++C CGS V Sbjct: 79 LIINKRVSYETIKKKLDEFINIFVICPVCKRPDTELIERGRKIYYIKCHACGSESPV 135
>IF5_YEAST (P38431) Eukaryotic translation initiation factor 5 (eIF-5)| Length = 405 Score = 43.9 bits (102), Expect = 9e-05 Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 3/67 (4%) Frame = -1 Query: 389 EMGTSXSLX-GQQRLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDT--ILSKENRLFF 219 E+G S+ + R ++ G P + +L +IN++V+C CK+P+T I++K+N L Sbjct: 60 ELGAQTSISVDKDRYLVNGVHEPAKLQDVLDGFINKFVLCGSCKNPETEIIITKDNDL-V 118 Query: 218 LRCEQCG 198 C+ CG Sbjct: 119 RDCKACG 125
>IF5_CAEEL (Q22918) Eukaryotic translation initiation factor 5 (eIF-5)| Length = 436 Score = 38.9 bits (89), Expect = 0.003 Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Frame = -1 Query: 389 EMGTSXSLXGQ-QRLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTILSKENRLFFLR 213 E+G + + +R ++ G + IL +I ++V+C C++P+T L + Sbjct: 60 ELGAQTNFDAKNERYIVNGEHDANKLQDILDGFIKKFVLCKSCENPETQLFVRKNNIKSK 119 Query: 212 CEQCGSS 192 C+ CG S Sbjct: 120 CKACGCS 126
>IF5_PHAVU (P48724) Eukaryotic translation initiation factor 5 (eIF-5)| Length = 443 Score = 37.4 bits (85), Expect = 0.009 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Frame = -1 Query: 344 IKGRFAPKNFEAILRRYINEYVICNGCKSPDT-ILSKENRLFFLRCEQCG 198 + G +L +I +YV C GC +P+T IL +N++ L+C CG Sbjct: 78 VNGAHETAKLAGLLEIFIKKYVQCYGCGNPETEILITKNQMIQLKCAACG 127
>IF5Y_ARATH (Q9C8F1) Probable eukaryotic translation initiation factor 5-1| (eIF-5 1) Length = 439 Score = 36.6 bits (83), Expect = 0.015 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Frame = -1 Query: 347 VIKGRFAPKNFEAILRRYINEYVICNGCKSPDT-ILSKENRLFFLRCEQCG 198 ++ G +L +I +YV C GC +P+T IL + ++ L+C CG Sbjct: 77 LVNGAHDTSKLAGLLENFIKKYVQCYGCGNPETEILITKTQMLQLKCAACG 127
>IF5_MAIZE (P55876) Eukaryotic translation initiation factor 5 (eIF-5)| Length = 451 Score = 35.8 bits (81), Expect = 0.025 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Frame = -1 Query: 347 VIKGRFAPKNFEAILRRYINEYVICNGCKSPDT-ILSKENRLFFLRCEQCG 198 ++ G +L +I +YV C GC +P+T IL + ++ L+C CG Sbjct: 77 LVNGAHDTAKLAGLLEVFIKKYVQCYGCGNPETEILISKTQMISLKCAACG 127
>IF5_SCHPO (Q09689) Probable eukaryotic translation initiation factor 5| (eIF-5) Length = 395 Score = 35.4 bits (80), Expect = 0.033 Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 3/71 (4%) Frame = -1 Query: 401 FXHAEMGTSXSLXGQQ-RLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTILS--KEN 231 F E+G ++ R ++ G + +L +I +V+C C++P+T LS K++ Sbjct: 57 FFGFELGAQTTIIADMDRYIVNGAHDAGKLQDLLDVFIRRFVLCASCQNPETELSINKKD 116 Query: 230 RLFFLRCEQCG 198 + C+ CG Sbjct: 117 QTISYDCKACG 127
>IF5_DROME (Q9VXK6) Eukaryotic translation initiation factor 5 (eIF-5)| Length = 464 Score = 34.7 bits (78), Expect = 0.056 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Frame = -1 Query: 356 QRLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTIL--SKENRLFFLRCEQCG 198 +R V+ G + +L +I ++V+C C +P+T L S +N+ C+ CG Sbjct: 73 ERFVVNGSHDVNKLQDLLDGFIRKFVLCPECDNPETNLTVSAKNQTISQSCKACG 127
>IF5Z_ARATH (Q9S825) Probable eukaryotic translation initiation factor 5-2| (eIF-5 2) Length = 437 Score = 33.9 bits (76), Expect = 0.095 Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Frame = -1 Query: 347 VIKGRFAPKNFEAILRRYINEYVICNGCKSPDT-ILSKENRLFFLRCEQCG 198 ++ G +L +I ++V C GC +P+T I+ + ++ L+C CG Sbjct: 77 LVNGAHNTSKLAGLLENFIKKFVQCYGCGNPETEIIITKTQMVNLKCAACG 127
>SYS_LEPIN (Q8EY78) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)| (SerRS) Length = 417 Score = 31.6 bits (70), Expect = 0.47 Identities = 17/43 (39%), Positives = 22/43 (51%) Frame = -2 Query: 346 LSKEDLPRRTLKLYSGDTSMNMSYVMDVRAQIPSFPRRIGCSS 218 L K +LP R + L SGD S N S D+ +P R + SS Sbjct: 311 LKKLELPYRVIILCSGDISANSSITYDIEVWMPGLNRYMEISS 353
>SYS_LEPIC (Q72LS1) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)| (SerRS) Length = 417 Score = 31.6 bits (70), Expect = 0.47 Identities = 17/43 (39%), Positives = 22/43 (51%) Frame = -2 Query: 346 LSKEDLPRRTLKLYSGDTSMNMSYVMDVRAQIPSFPRRIGCSS 218 L K +LP R + L SGD S N S D+ +P R + SS Sbjct: 311 LKKLELPYRVIILCSGDISANSSITYDIEVWMPGLNRYMEISS 353
>ITT1_YEAST (Q04638) Translation termination inhibitor protein ITT1| Length = 464 Score = 31.6 bits (70), Expect = 0.47 Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%) Frame = -1 Query: 287 EYVICNGC-KSPDTILSKENRLFFLRCEQC 201 E+ +C GC KS T + +ENR+ +RC QC Sbjct: 203 EHYLCRGCAKSYFTAMIQENRISSVRCPQC 232
>GEI8_CAEEL (P34333) Gex-3-interacting protein 8| Length = 1780 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Frame = -1 Query: 344 IKGRFAPKNFEAILRRYINE-YVICNGCKSPDTILSKENRLFFLRC 210 + G F PK I +E V+C+GC+ L K+NR F RC Sbjct: 322 LNGTFMPKEAYEIFAICPDEDRVVCSGCREEAAKLYKDNRCFGNRC 367
>IF5_HUMAN (P55010) Eukaryotic translation initiation factor 5 (eIF-5)| Length = 431 Score = 30.0 bits (66), Expect = 1.4 Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Frame = -1 Query: 353 RLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTIL--SKENRLFFLRCEQCG 198 R ++ G + +L +I ++V+C C++P+T L + + + C+ CG Sbjct: 73 RYIVNGSHEANKLQDMLDGFIKKFVLCPECENPETDLHVNPKKQTIGNSCKACG 126
>IF5_RAT (Q07205) Eukaryotic translation initiation factor 5 (eIF-5)| Length = 429 Score = 30.0 bits (66), Expect = 1.4 Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Frame = -1 Query: 353 RLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTIL--SKENRLFFLRCEQCG 198 R ++ G + +L +I ++V+C C++P+T L + + + C+ CG Sbjct: 73 RYIVNGSHEANKLQDMLDGFIKKFVLCPECENPETDLHVNPKKQTIGNSCKACG 126
>IF5_MOUSE (P59325) Eukaryotic translation initiation factor 5 (eIF-5)| Length = 429 Score = 30.0 bits (66), Expect = 1.4 Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Frame = -1 Query: 353 RLVIKGRFAPKNFEAILRRYINEYVICNGCKSPDTIL--SKENRLFFLRCEQCG 198 R ++ G + +L +I ++V+C C++P+T L + + + C+ CG Sbjct: 73 RYIVNGSHEANKLQDMLDGFIKKFVLCPECENPETDLHVNPKKQTIGNSCKACG 126
>NCKX2_CHICK (Q9IAL7) Sodium/potassium/calcium exchanger 2 precursor| (Na(+)/K(+)/Ca(2+)-exchange protein 2) (Retinal cone Na-Ca+K exchanger) Length = 651 Score = 28.1 bits (61), Expect = 5.2 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Frame = +1 Query: 196 EPHCSQRRKNNRFSLERMVSG--LLHPLHMTYSLMYLLSIASKFFGANLPLIT 348 E H + FSLE G +LH + M Y + L + +FF +L +IT Sbjct: 115 EEHSKGEYPEDLFSLEERRKGAVILHVIGMIYMFIALAIVCDEFFVPSLTVIT 167
>STTP1_RAT (Q496Z0) Stat3-interacting protein (StIP1)| Length = 821 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 5/33 (15%) Frame = -3 Query: 201 WFVKVS--CSYQGWICGASWASEGWNL---SCS 118 WF K+ C ++ WI G WA+ G +L SCS Sbjct: 196 WFQKMLSLCGHEDWIRGVEWATFGRDLFLASCS 228
>RPOC2_PINKO (Q85X62) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1209 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/47 (23%), Positives = 25/47 (53%) Frame = -1 Query: 404 MFXHAEMGTSXSLXGQQRLVIKGRFAPKNFEAILRRYINEYVICNGC 264 +F ++E T ++ + R I F+PKN+ ++ +N +++ C Sbjct: 546 IFSYSETETDRTISNEHRDSIYVTFSPKNYNMKGKKQMNRFIVSLQC 592
>MMP24_HUMAN (Q9Y5R2) Matrix metalloproteinase-24 precursor (EC 3.4.24.-)| (MMP-24) (Membrane-type matrix metalloproteinase 5) (MT-MMP 5) (Membrane-type-5 matrix metalloproteinase) (MT5-MMP) Length = 645 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +1 Query: 193 DEPHCSQRRKNNRFSLERMVSGLLHPLHMTYSL 291 D PH S+RR+N R++L H+TYS+ Sbjct: 143 DHPHLSRRRRNKRYAL---TGQKWRQKHITYSI 172
>MERA_STAES (P0A0E4) Mercuric reductase (EC 1.16.1.1) (Hg(II) reductase)| Length = 547 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/33 (36%), Positives = 23/33 (69%) Frame = +3 Query: 243 KDGIWALTSITYDIFIDVSPEYSFKVLRGKSSF 341 KDG+ ++ + + +ID+ EY F ++RG++SF Sbjct: 168 KDGL--VSQMRQEKYIDLIEEYGFDLIRGEASF 198
>MERA_STAAU (P0A0E5) Mercuric reductase (EC 1.16.1.1) (Hg(II) reductase)| Length = 547 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/33 (36%), Positives = 23/33 (69%) Frame = +3 Query: 243 KDGIWALTSITYDIFIDVSPEYSFKVLRGKSSF 341 KDG+ ++ + + +ID+ EY F ++RG++SF Sbjct: 168 KDGL--VSQMRQEKYIDLIEEYGFDLIRGEASF 198
>MMP24_RAT (Q99PW6) Matrix metalloproteinase-24 precursor (EC 3.4.24.-)| (MMP-24) (Membrane-type matrix metalloproteinase 5) (MT-MMP 5) (Membrane-type-5 matrix metalloproteinase) (MT5-MMP) Length = 618 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +1 Query: 193 DEPHCSQRRKNNRFSLERMVSGLLHPLHMTYSL 291 D PH S+RR+N R++L H+TYS+ Sbjct: 116 DHPHLSRRRRNKRYAL---TGQKWRQKHITYSI 145
>MMP24_MOUSE (Q9R0S2) Matrix metalloproteinase-24 precursor (EC 3.4.24.-)| (MMP-24) (Membrane-type matrix metalloproteinase 5) (MT-MMP 5) (Membrane-type-5 matrix metalloproteinase) (MT5-MMP) (MMP-21) Length = 618 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +1 Query: 193 DEPHCSQRRKNNRFSLERMVSGLLHPLHMTYSL 291 D PH S+RR+N R++L H+TYS+ Sbjct: 116 DHPHLSRRRRNKRYAL---TGQKWRQKHITYSI 145
>IMB3_MOUSE (Q8BKC5) Importin beta-3 (Karyopherin beta-3) (Ran-binding protein| 5) (RanBP5) Length = 1097 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/53 (33%), Positives = 24/53 (45%) Frame = +1 Query: 211 QRRKNNRFSLERMVSGLLHPLHMTYSLMYLLSIASKFFGANLPLITNLCCPXR 369 Q +N + VS +LH + +Y L +F LPLI NL CP R Sbjct: 829 QDEDDNDVYILTKVSDILHSIFSSYKEKVL-----PWFEQLLPLIVNLICPQR 876
>IMB3_HUMAN (O00410) Importin beta-3 (Karyopherin beta-3) (Ran-binding protein| 5) (RanBP5) Length = 1097 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/53 (33%), Positives = 24/53 (45%) Frame = +1 Query: 211 QRRKNNRFSLERMVSGLLHPLHMTYSLMYLLSIASKFFGANLPLITNLCCPXR 369 Q +N + VS +LH + +Y L +F LPLI NL CP R Sbjct: 829 QDEDDNDVYILTKVSDILHSIFSSYKEKVL-----PWFEQLLPLIVNLICPHR 876
>VE08_VARV (P33820) Protein E8| Length = 273 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/48 (31%), Positives = 24/48 (50%) Frame = +1 Query: 160 TNPALIGATDLDEPHCSQRRKNNRFSLERMVSGLLHPLHMTYSLMYLL 303 T P IG D+D P+ S+ R + + +S +L+ LM+LL Sbjct: 193 TGPVPIGIKDIDHPNLSRARSPSDYETLANISTILYFTKYDPVLMFLL 240
>R1AB_BEV (P18458) Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein)| [Includes: Replicase polyprotein 1a (pp1a) (ORF1a)] [Contains: RNA-directed RNA polymerase (EC 2.7.7.48) (RdRp) (Pol); Helicase (Hel)] (Fragment) Length = 2291 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/33 (36%), Positives = 15/33 (45%) Frame = -2 Query: 118 CQRNPTICRFTNNLYCPAYTVPRPPCGFCYFVH 20 C NP + C VP P C +CY+VH Sbjct: 853 CCPNPAVS------VCEECYVPLPLCAYCYYVH 879
>DNAJ1_NOCFA (Q5YZX0) Chaperone protein dnaJ 1| Length = 384 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/48 (27%), Positives = 24/48 (50%) Frame = -1 Query: 293 INEYVICNGCKSPDTILSKENRLFFLRCEQCGSSRSVAPIKAGFVAQV 150 ++ V+C+ C T + + +RCE CG + V ++ F+ QV Sbjct: 140 VDTAVLCDACHGSGTHGNSKP----VRCETCGGAGEVQSVQRSFLGQV 183
>IF5_TRICA (Q26891) Eukaryotic translation initiation factor 5 (eIF-5)| (Fragment) Length = 162 Score = 27.3 bits (59), Expect = 8.9 Identities = 11/39 (28%), Positives = 23/39 (58%), Gaps = 2/39 (5%) Frame = -1 Query: 308 ILRRYINEYVICNGCKSPDT--ILSKENRLFFLRCEQCG 198 +L +I ++V+C C++P+T ++S + C+ CG Sbjct: 2 LLDGFIRKFVLCPECENPETELLVSTKRSTISQGCKACG 40
>YAJ8_SCHPO (Q09908) Hypothetical protein C30D11.08c in chromosome I| Length = 538 Score = 27.3 bits (59), Expect = 8.9 Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 11/57 (19%) Frame = -1 Query: 290 NEYVICNGCKSP-----------DTILSKENRLFFLRCEQCGSSRSVAPIKAGFVAQ 153 N V C+GC +P D +L N +F C+ C + AP+ G A+ Sbjct: 247 NRIVFCDGCNTPFHQLCHEPYISDELLDSPNGEWF--CDDCIRRKKQAPLVTGTTAR 301
>SYS_WIGBR (Q8D265) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)| (SerRS) Length = 429 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = -2 Query: 334 DLPRRTLKLYSGDTSMNMSYVMDVRAQIPSFPRRIGCSS 218 DLP R + L SGDT + D+ +PS + I SS Sbjct: 319 DLPYRKILLCSGDTGFSSCKTYDLEVWMPSRNKYIEVSS 357 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,977,741 Number of Sequences: 219361 Number of extensions: 1133858 Number of successful extensions: 3363 Number of sequences better than 10.0: 63 Number of HSP's better than 10.0 without gapping: 3282 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3361 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 1354661664 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
