| Clone Name | rbaal18f10 |
|---|---|
| Clone Library Name | barley_pub |
>DLL3_HUMAN (Q9NYJ7) Delta-like protein 3 precursor (Drosophila Delta homolog| 3) Length = 618 Score = 30.4 bits (67), Expect = 4.5 Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 1/52 (1%) Frame = +2 Query: 317 WTSPSCRSPAQ-SCAVCPACPSXXXXXXXXXXPPQCKGTPPAHRKPCRG*PR 469 WT P C P S + P PS P C G P A+ C PR Sbjct: 243 WTGPLCTVPVSTSSCLSPRGPSSATTGCLVPGPGPCDGNPCANGGSCSETPR 294
>MRP4_HUMAN (O15439) Multidrug resistance-associated protein 4| (MRP/cMOAT-related ABC transporter) (Multi-specific organic anion transporter-B) (MOAT-B) Length = 1325 Score = 30.0 bits (66), Expect = 5.8 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Frame = -1 Query: 626 RTREDFVYGVYDGHHTYDEGQEKKGFWE-DVSEWYQEAEPPQGFQALISWSFPPAVILGM 450 R ED +Y V + G+E +GFW+ +V +A+ P +A+I + ++LG+ Sbjct: 38 RLEEDDMYSVLPEDRSQHLGEELQGFWDKEVLRAENDAQKPSLTRAIIKCYWKSYLVLGI 97
>Y876_METJA (Q58286) Putative ABC transporter permease protein MJ0876| Length = 351 Score = 30.0 bits (66), Expect = 5.8 Identities = 12/31 (38%), Positives = 22/31 (70%) Frame = +3 Query: 525 VPLGDILPEALLFLAFIIGVVAVIHSIHKVL 617 + LGD++P + + FIIGV+ +I S++ +L Sbjct: 193 ITLGDVIPMTICSIIFIIGVMFLIKSLNALL 223
>SDK2_MOUSE (Q6V4S5) Protein sidekick-2 precursor| Length = 2176 Score = 30.0 bits (66), Expect = 5.8 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 5/54 (9%) Frame = -1 Query: 605 YGVYDGH-----HTYDEGQEKKGFWEDVSEWYQEAEPPQGFQALISWSFPPAVI 459 YG DGH HT + E++ ED+ EW + Q F A+ S + AV+ Sbjct: 1142 YGRSDGHGKTLSHTVQDRVEREYTIEDLEEWTEYRVQVQAFNAIGSGPWSQAVV 1195
>NRAM1_CHICK (P51027) Natural resistance-associated macrophage protein 1 (NRAMP| 1) Length = 555 Score = 29.6 bits (65), Expect = 7.6 Identities = 12/35 (34%), Positives = 22/35 (62%) Frame = +3 Query: 495 LETLRRLSFLVPLGDILPEALLFLAFIIGVVAVIH 599 L TLR L +L+PLG +L + F+ +++ ++ H Sbjct: 493 LPTLRGLGYLIPLGLLLVAYVAFVTYLLWTCSIAH 527
>TRMD_AZOSE (Q5NXM5) tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.31)| (M1G-methyltransferase) (tRNA [GM37] methyltransferase) Length = 263 Score = 29.6 bits (65), Expect = 7.6 Identities = 17/52 (32%), Positives = 24/52 (46%) Frame = -1 Query: 365 DKPHNFEPEIYMMERSKRDKLIADYNSMDIWDFNEKYGELWDFTVNRDDLIQ 210 D PH PEIY ER + L ++ ++ W + G W R DL+Q Sbjct: 188 DCPHYTRPEIYAGERVPQVLLSGNHAAIRRWRLKQALGTTWR---RRPDLLQ 236
>LPXK_METCA (Q60B49) Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A| 4'-kinase) Length = 336 Score = 29.6 bits (65), Expect = 7.6 Identities = 16/46 (34%), Positives = 24/46 (52%) Frame = -1 Query: 533 EWYQEAEPPQGFQALISWSFPPAVILGMAFDVPGEYLYIGAAIFIV 396 +WY EA+PP G +AL S F AV L + + +G + +V Sbjct: 15 QWYAEAQPPWGLRAL-SRGFGAAVALRRGYYRRNAKVSLGVPVIVV 59
>CWC27_ASPFU (Q4WE62) Peptidyl-prolyl isomerase cwc27 (EC 5.2.1.8)| Length = 559 Score = 29.3 bits (64), Expect = 10.0 Identities = 14/44 (31%), Positives = 21/44 (47%) Frame = +2 Query: 425 GTPPAHRKPCRG*PRGEMTRR*ALGNPEEAQLLGTTRRHPPRSP 556 G PPA+ P + P E R +P + L R+H P++P Sbjct: 254 GIPPANDAPKKTSPEAEQQTRKRPRSPSPRRSLSAERKHRPKTP 297 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 89,260,388 Number of Sequences: 219361 Number of extensions: 1916054 Number of successful extensions: 4798 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 4639 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4797 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5767334219 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)