ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal17p16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK103541.1| Oryza sativa (japonica cultivar-group) cDNA clon... 299 5e-78
2dbj|AB026562.1| Oryza sativa (japonica cultivar-group) OsPAG1 mR... 299 5e-78
3ref|NM_191042.1| Oryza sativa (japonica cultivar-group), predic... 291 1e-75
4ref|XM_475461.1| Oryza sativa (japonica cultivar-group), predic... 289 5e-75
5dbj|AK061784.1| Oryza sativa (japonica cultivar-group) cDNA clon... 276 7e-71
6gb|BT017777.1| Zea mays clone EL01N0503B10.c mRNA sequence 250 4e-63
7gb|AY109645.1| Zea mays CL4356_2 mRNA sequence 226 6e-56
8gb|BT017004.1| Zea mays clone EK07D2310A08.c mRNA sequence 172 7e-40
9gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome... 94 5e-16
10gb|AY459341.1| Oryza sativa (japonica cultivar-group) clone CL03... 94 5e-16
11dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 94 5e-16
12dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 90 8e-15
13dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic D... 90 8e-15
14dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic D... 90 8e-15
15ref|NM_128260.3| Arabidopsis thaliana PAG1; endopeptidase/ pepti... 58 3e-05
16emb|Y13693.1|ATY13693 Arabidopsis thaliana mRNA for proteasome s... 58 3e-05
17gb|AY124806.1| Arabidopsis thaliana At2g27020/T20P8.7 mRNA, comp... 58 3e-05
18gb|AF375455.1| Arabidopsis thaliana At2g27020/T20P8.7 mRNA, comp... 58 3e-05
19gb|AY088609.1| Arabidopsis thaliana clone 8342 mRNA, complete se... 58 3e-05
20gb|AF043528.1|AF043528 Arabidopsis thaliana 20S proteasome subun... 58 3e-05
21emb|BX819273.1|CNS0A9VK Arabidopsis thaliana Full-length cDNA Co... 50 0.007
22gb|BT013996.1| Lycopersicon esculentum clone 133043F, mRNA sequence 48 0.029
23emb|AJ291738.1|NTA291738 Nicotiana tabacum mRNA for putative alp... 44 0.45
24gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome 44 0.45
25ref|XM_642011.1| Dictyostelium discoideum proteasome C8 (DDB0191... 42 1.8
26gb|AC168148.15| Medicago truncatula clone mth2-80b11, complete s... 42 1.8
27gb|AC152407.19| Medicago truncatula clone mth2-77l23, complete s... 42 1.8
28gb|AF369906.1| Sorghum bicolor clone BAC10J22 Sbb3766 sequence 42 1.8
29gb|U61988.1|DDU61988 Dictyostelium discoideum PrtD (prtD) mRNA, ... 42 1.8
30gb|AC168217.2| Mus musculus BAC clone RP24-498P8 from chromosome... 40 7.0
31gb|BC097109.1| Danio rerio zgc:114044, mRNA (cDNA clone MGC:1140... 40 7.0
32ref|NM_001030187.1| Danio rerio zgc:114044 (zgc:114044), mRNA 40 7.0
33gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 7.0
34emb|AL353764.9| Human DNA sequence from clone RP11-440G5 on chro... 40 7.0
35emb|AJ586898.1| Platanus acerifolia partial mRNA for polygalactu... 40 7.0
36gb|AC092997.6| Homo sapiens 3 BAC RP11-711L14 (Roswell Park Canc... 40 7.0
37gb|BC113948.1| Rattus norvegicus cDNA clone MGC:124733 IMAGE:793... 40 7.0
38emb|BX511180.7| Zebrafish DNA sequence from clone CH211-221H1 in... 40 7.0
39ref|XM_340818.2| PREDICTED: Rattus norvegicus myosin, heavy poly... 40 7.0
40dbj|AP003406.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
41emb|Z69793.1|CER03A10 Caenorhabditis elegans Cosmid R03A10, comp... 40 7.0
42gb|AC137678.11| Mus musculus chromosome 9, clone RP24-484G16, co... 40 7.0
43emb|BX119994.7| Mouse DNA sequence from clone RP23-272G10 on chr... 40 7.0
44gb|AC154374.1| Mus musculus BAC clone RP23-81F24 from 9, complet... 40 7.0
45gb|M98497.1|CHKRHOPR Chicken rhodopsin gene, promoter region 40 7.0 
>dbj|AK103541.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132C12, full
            insert sequence
          Length = 1188

 Score =  299 bits (151), Expect = 5e-78
 Identities = 295/343 (86%)
 Strand = Plus / Minus

                                                                        
Query: 179  gtctcttcttagtcagcatccatctcttccaacgctgcctgcgctgctgccttggcctgc 238
            ||||| ||||| |||||||||||||| || | ||||||||| |||||  |||||||||||
Sbjct: 1012 gtctcctcttaatcagcatccatctcctcaagcgctgcctgagctgcaaccttggcctgc 953

                                                                        
Query: 239  tccagaagatcactcggaaccttctcgtgctgacggttagattcctcacatacccagctc 298
            |||| |||||||   ||||||||||  ||||| || || ||||| ||||||| |||||| 
Sbjct: 952  tccaaaagatcagcaggaaccttctgatgctggcgatttgattcatcacatatccagctt 893

                                                                        
Query: 299  agttccagctcaaaagatttgtctttcgcttcgtcgtgcacaccataaattatcttggca 358
            | ||||| |||||||| |||||| || ||||| || || || |||||||| ||||| |||
Sbjct: 892  aattccaactcaaaagctttgtccttagcttcatcatgtactccataaatgatctttgca 833

                                                                        
Query: 359  acctcaacgatgccttccctgcaggttagctcagaaagcttcaatttctcaatctccgtt 418
            ||||| || |||||||||| |||||| ||||| ||||||||||| ||||| || || |||
Sbjct: 832  acctccacaatgccttcccggcaggtaagctcggaaagcttcaacttctctatttcagtt 773

                                                                        
Query: 419  tttgcagcttgtctacctttacccagagcagcaccaaaatatttataggagaggcctgaa 478
            |||||||| ||||| ||||||||||||||||||||||| ||||| || ||||  ||||| 
Sbjct: 772  tttgcagcctgtcttcctttacccagagcagcaccaaagtatttgtatgagactcctgag 713

                                                       
Query: 479  ggttcgatcatgtagagctgtggcccatccctatcataacctc 521
            |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  ggttcgatcatgtagagctgtggcccatccctatcataacctc 670
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>dbj|AB026562.1| Oryza sativa (japonica cultivar-group) OsPAG1 mRNA for alpha 7
           subunit of 20S proteasome, complete cds
          Length = 1091

 Score =  299 bits (151), Expect = 5e-78
 Identities = 295/343 (86%)
 Strand = Plus / Minus

                                                                       
Query: 179 gtctcttcttagtcagcatccatctcttccaacgctgcctgcgctgctgccttggcctgc 238
           ||||| ||||| |||||||||||||| || | ||||||||| |||||  |||||||||||
Sbjct: 908 gtctcctcttaatcagcatccatctcctcaagcgctgcctgagctgcaaccttggcctgc 849

                                                                       
Query: 239 tccagaagatcactcggaaccttctcgtgctgacggttagattcctcacatacccagctc 298
           |||| |||||||   ||||||||||  ||||| || || ||||| ||||||| |||||| 
Sbjct: 848 tccaaaagatcagcaggaaccttctgatgctggcgatttgattcatcacatatccagctt 789

                                                                       
Query: 299 agttccagctcaaaagatttgtctttcgcttcgtcgtgcacaccataaattatcttggca 358
           | ||||| |||||||| |||||| || ||||| || || || |||||||| ||||| |||
Sbjct: 788 aattccaactcaaaagctttgtccttagcttcatcatgtactccataaatgatctttgca 729

                                                                       
Query: 359 acctcaacgatgccttccctgcaggttagctcagaaagcttcaatttctcaatctccgtt 418
           ||||| || |||||||||| |||||| ||||| ||||||||||| ||||| || || |||
Sbjct: 728 acctccacaatgccttcccggcaggtaagctcggaaagcttcaacttctctatttcagtt 669

                                                                       
Query: 419 tttgcagcttgtctacctttacccagagcagcaccaaaatatttataggagaggcctgaa 478
           |||||||| ||||| ||||||||||||||||||||||| ||||| || ||||  ||||| 
Sbjct: 668 tttgcagcctgtcttcctttacccagagcagcaccaaagtatttgtatgagactcctgag 609

                                                      
Query: 479 ggttcgatcatgtagagctgtggcccatccctatcataacctc 521
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 ggttcgatcatgtagagctgtggcccatccctatcataacctc 566
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>ref|NM_191042.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 750

 Score =  291 bits (147), Expect = 1e-75
 Identities = 285/331 (86%)
 Strand = Plus / Minus

                                                                       
Query: 191 tcagcatccatctcttccaacgctgcctgcgctgctgccttggcctgctccagaagatca 250
           |||||||||||||| || | ||||||||| |||||  ||||||||||||||| |||||||
Sbjct: 746 tcagcatccatctcctcaagcgctgcctgagctgcaaccttggcctgctccaaaagatca 687

                                                                       
Query: 251 ctcggaaccttctcgtgctgacggttagattcctcacatacccagctcagttccagctca 310
              ||||||||||  ||||| || || ||||| ||||||| |||||| | ||||| ||||
Sbjct: 686 gcaggaaccttctgatgctggcgatttgattcatcacatatccagcttaattccaactca 627

                                                                       
Query: 311 aaagatttgtctttcgcttcgtcgtgcacaccataaattatcttggcaacctcaacgatg 370
           |||| |||||| || ||||| || || || |||||||| ||||| |||||||| || |||
Sbjct: 626 aaagctttgtccttagcttcatcatgtactccataaatgatctttgcaacctccacaatg 567

                                                                       
Query: 371 ccttccctgcaggttagctcagaaagcttcaatttctcaatctccgtttttgcagcttgt 430
           ||||||| |||||| ||||| ||||||||||| ||||| || || ||||||||||| |||
Sbjct: 566 ccttcccggcaggtaagctcggaaagcttcaacttctctatttcagtttttgcagcctgt 507

                                                                       
Query: 431 ctacctttacccagagcagcaccaaaatatttataggagaggcctgaaggttcgatcatg 490
           || ||||||||||||||||||||||| ||||| || ||||  ||||| ||||||||||||
Sbjct: 506 cttcctttacccagagcagcaccaaagtatttgtatgagactcctgagggttcgatcatg 447

                                          
Query: 491 tagagctgtggcccatccctatcataacctc 521
           |||||||||||||||||||||||||||||||
Sbjct: 446 tagagctgtggcccatccctatcataacctc 416
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>ref|XM_475461.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 750

 Score =  289 bits (146), Expect = 5e-75
 Identities = 287/334 (85%)
 Strand = Plus / Minus

                                                                       
Query: 188 tagtcagcatccatctcttccaacgctgcctgcgctgctgccttggcctgctccagaaga 247
           ||||| || |||||||| || | ||||||||| || |||||||| ||||||||||  || 
Sbjct: 749 tagtctgcgtccatctcctcgagcgctgcctgggcggctgccttcgcctgctccacgagg 690

                                                                       
Query: 248 tcactcggaaccttctcgtgctgacggttagattcctcacatacccagctcagttccagc 307
           ||    ||||||||||| ||||| || || ||||| || |||||||||||||| ||||| 
Sbjct: 689 tcgtctggaaccttctcatgctggcgctttgattcatcgcatacccagctcagctccagt 630

                                                                       
Query: 308 tcaaaagatttgtctttcgcttcgtcgtgcacaccataaattatcttggcaacctcaacg 367
           |||||   ||||||||| |||||||| ||||| ||||| |||||||| ||||||||||| 
Sbjct: 629 tcaaagtctttgtctttagcttcgtcatgcactccatagattatctttgcaacctcaaca 570

                                                                       
Query: 368 atgccttccctgcaggttagctcagaaagcttcaatttctcaatctccgtttttgcagct 427
           |||||||| ||||| || ||||||||||| |||| |||||| ||||||||||||||||| 
Sbjct: 569 atgccttctctgcatgtaagctcagaaagattcagtttctctatctccgtttttgcagcc 510

                                                                       
Query: 428 tgtctacctttacccagagcagcaccaaaatatttataggagaggcctgaaggttcgatc 487
           ||||| ||||| ||||| |||||||| || |||||||||||||| || ||||||||||||
Sbjct: 509 tgtcttcctttccccagggcagcaccgaagtatttataggagagccccgaaggttcgatc 450

                                             
Query: 488 atgtagagctgtggcccatccctatcataacctc 521
           |||||||| |||||||||||||||||||||||||
Sbjct: 449 atgtagagttgtggcccatccctatcataacctc 416
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>dbj|AK061784.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-E06, full
           insert sequence
          Length = 1120

 Score =  276 bits (139), Expect = 7e-71
 Identities = 293/343 (85%), Gaps = 1/343 (0%)
 Strand = Plus / Minus

                                                                       
Query: 179 gtctcttcttagtcagcatccatctcttccaacgctgcctgcgctgctgccttggcctgc 238
           ||||| ||||| |||||||||||||| || | ||||||||| |||||  |||||||||||
Sbjct: 944 gtctcctcttaatcagcatccatctcctcaagcgctgcctgagctgcaaccttggcctgc 885

                                                                       
Query: 239 tccagaagatcactcggaaccttctcgtgctgacggttagattcctcacatacccagctc 298
           |||| |||||||   ||||||||||  ||||| || || ||||| ||||||| |||||| 
Sbjct: 884 tccaaaagatcagcaggaaccttctgatgctggcgatttgattcatcacatatccagctt 825

                                                                       
Query: 299 agttccagctcaaaagatttgtctttcgcttcgtcgtgcacaccataaattatcttggca 358
           | ||||| |||||||| |||||| || ||||| || || || |||||||| ||||| |||
Sbjct: 824 aattccaactcaaaagctttgtccttagcttcatcatgtactccataaatgatctttgca 765

                                                                       
Query: 359 acctcaacgatgccttccctgcaggttagctcagaaagcttcaatttctcaatctccgtt 418
           ||||| || |||||||||| |||||| ||||| ||||||||||| ||||| || || |||
Sbjct: 764 acctccacaatgccttcccggcaggtaagctcggaaagcttcaacttctctatttcagtt 705

                                                                       
Query: 419 tttgcagcttgtctacctttacccagagcagcaccaaaatatttataggagaggcctgaa 478
           |||||||| ||||| ||||||||||||||||||||||| ||||| || ||||  ||||| 
Sbjct: 704 tttgcagcctgtcttcctttacccagagcagcaccaaagtatttgtatgagactcctgag 645

                                                      
Query: 479 ggttcgatcatgtagagctgtggcccatccctatcataacctc 521
           |||||||||||  ||||||||||||||||||||||||||||||
Sbjct: 644 ggttcgatcat-aagagctgtggcccatccctatcataacctc 603
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>gb|BT017777.1| Zea mays clone EL01N0503B10.c mRNA sequence
          Length = 1266

 Score =  250 bits (126), Expect = 4e-63
 Identities = 285/338 (84%)
 Strand = Plus / Minus

                                                                       
Query: 184 ttcttagtcagcatccatctcttccaacgctgcctgcgctgctgccttggcctgctccag 243
           ||||||||||||||||||||| || |  |||||||| || || || ||||||||||||| 
Sbjct: 939 ttcttagtcagcatccatctcctcaagagctgcctgagcagcagctttggcctgctccaa 880

                                                                       
Query: 244 aagatcactcggaaccttctcgtgctgacggttagattcctcacatacccagctcagttc 303
            || ||| | ||| ||||||  ||||||||||| ||||| ||||| | ||||||||  ||
Sbjct: 879 cagttcatttggacccttctgatgctgacggttcgattcatcacagatccagctcaactc 820

                                                                       
Query: 304 cagctcaaaagatttgtctttcgcttcgtcgtgcacaccataaattatcttggcaacctc 363
           || |||||||| |||||| ||||||||||| ||||| |||||||||||||| ||||| ||
Sbjct: 819 caactcaaaagctttgtccttcgcttcgtcatgcactccataaattatctttgcaacttc 760

                                                                       
Query: 364 aacgatgccttccctgcaggttagctcagaaagcttcaatttctcaatctccgtttttgc 423
           ||| |||||||||| |||||| ||||| ||||| ||||| || || ||||| || |||||
Sbjct: 759 aacaatgccttcccggcaggtaagctccgaaagtttcaacttttctatctcagtctttgc 700

                                                                       
Query: 424 agcttgtctacctttacccagagcagcaccaaaatatttataggagaggcctgaaggttc 483
           ||| ||||| || || ||||  |||||||| || ||||| ||||| |  ||||| |||||
Sbjct: 699 agcctgtctccccttccccaatgcagcaccgaagtatttgtaggaaactcctgagggttc 640

                                                 
Query: 484 gatcatgtagagctgtggcccatccctatcataacctc 521
            |||||||||||||||||||||||||||||||||||||
Sbjct: 639 tatcatgtagagctgtggcccatccctatcataacctc 602
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>gb|AY109645.1| Zea mays CL4356_2 mRNA sequence
          Length = 1252

 Score =  226 bits (114), Expect = 6e-56
 Identities = 282/338 (83%)
 Strand = Plus / Plus

                                                                       
Query: 184 ttcttagtcagcatccatctcttccaacgctgcctgcgctgctgccttggcctgctccag 243
           ||||||||||||||||||||| || |  |||||||| || || || ||||||||||||| 
Sbjct: 284 ttcttagtcagcatccatctcctcaagagctgcctgagcagcagctttggcctgctccaa 343

                                                                       
Query: 244 aagatcactcggaaccttctcgtgctgacggttagattcctcacatacccagctcagttc 303
            || ||| | ||||||||||  ||||| ||||| ||||| ||||| | ||||||||  ||
Sbjct: 344 cagttcatttggaaccttctgatgctggcggttcgattcatcacagatccagctcaactc 403

                                                                       
Query: 304 cagctcaaaagatttgtctttcgcttcgtcgtgcacaccataaattatcttggcaacctc 363
           || |||||||| |||||| ||||||||||| ||||| |||||||||||||| ||||| ||
Sbjct: 404 caactcaaaagctttgtccttcgcttcgtcatgcactccataaattatctttgcaacttc 463

                                                                       
Query: 364 aacgatgccttccctgcaggttagctcagaaagcttcaatttctcaatctccgtttttgc 423
           ||| |||||||| | |||||| ||||| ||||| ||||| || || ||||| || |||||
Sbjct: 464 aacaatgccttctcggcaggtaagctccgaaagtttcaacttttctatctcagtctttgc 523

                                                                       
Query: 424 agcttgtctacctttacccagagcagcaccaaaatatttataggagaggcctgaaggttc 483
           ||| || || || || ||||  |||||||| || ||||||||||| |  ||||| || ||
Sbjct: 524 agcctgccttcccttccccaatgcagcaccgaagtatttataggaaactcctgagggctc 583

                                                 
Query: 484 gatcatgtagagctgtggcccatccctatcataacctc 521
            |||||||| ||||||||||||||||||||||||||||
Sbjct: 584 tatcatgtaaagctgtggcccatccctatcataacctc 621
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>gb|BT017004.1| Zea mays clone EK07D2310A08.c mRNA sequence
          Length = 1256

 Score =  172 bits (87), Expect = 7e-40
 Identities = 186/219 (84%)
 Strand = Plus / Minus

                                                                        
Query: 184  ttcttagtcagcatccatctcttccaacgctgcctgcgctgctgccttggcctgctccag 243
            ||||||||||||||||||||| || |  |||||||| || || || ||||||||||||| 
Sbjct: 1003 ttcttagtcagcatccatctcctcaagagctgcctgagcagcagctttggcctgctccaa 944

                                                                        
Query: 244  aagatcactcggaaccttctcgtgctgacggttagattcctcacatacccagctcagttc 303
             || ||| | ||||||||||  ||||||||||| ||||| ||||| | ||||||||  ||
Sbjct: 943  cagttcatttggaaccttctgatgctgacggttcgattcatcacagatccagctcaactc 884

                                                                        
Query: 304  cagctcaaaagatttgtctttcgcttcgtcgtgcacaccataaattatcttggcaacctc 363
            || |||||||| |||||| ||||||||||| ||||| |||||||||||||| ||||| ||
Sbjct: 883  caactcaaaagctttgtccttcgcttcgtcatgcactccataaattatctttgcaacttc 824

                                                   
Query: 364  aacgatgccttccctgcaggttagctcagaaagcttcaa 402
            ||| |||||||||| |||||| ||||| ||||| |||||
Sbjct: 823  aacaatgccttcccggcaggtaagctccgaaagtttcaa 785



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 89/103 (86%)
 Strand = Plus / Minus

                                                                       
Query: 419 tttgcagcttgtctacctttacccagagcagcaccaaaatatttataggagaggcctgaa 478
           |||||||| ||||| || || ||||  |||||||| || ||||| ||||| |  ||||| 
Sbjct: 698 tttgcagcctgtctccccttccccaatgcagcaccgaagtatttgtaggaaactcctgag 639

                                                      
Query: 479 ggttcgatcatgtagagctgtggcccatccctatcataacctc 521
           ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 638 ggttctatcatgtagagctgtggcccatccctatcataacctc 596
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>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0088I06, complete sequence
          Length = 187651

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 56/59 (94%)
 Strand = Plus / Plus

                                                                        
Query: 463   ataggagaggcctgaaggttcgatcatgtagagctgtggcccatccctatcataacctc 521
             ||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 47897 ataggagagccccgaaggttcgatcatgtagagttgtggcccatccctatcataacctc 47955



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                         
Query: 350   atcttggcaacctcaacgatgccttccctgcaggttagctcagaaagcttcaatttctca 409
             ||||| ||||||||||| |||||||| ||||| || ||||||||||| |||| |||||| 
Sbjct: 46785 atctttgcaacctcaacaatgccttctctgcatgtaagctcagaaagattcagtttctct 46844

                   
Query: 410   atctcc 415
             ||||||
Sbjct: 46845 atctcc 46850



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                         
Query: 257   accttctcgtgctgacggttagattcctcacatacccagctcagttccagctcaaaagat 316
             |||||||| ||||| || || ||||| || |||||||||||||| ||||| |||||   |
Sbjct: 46196 accttctcatgctggcgctttgattcatcgcatacccagctcagctccagttcaaagtct 46255

                                          
Query: 317   ttgtctttcgcttcgtcgtgcacaccata 345
             |||||||| |||||||| ||||| |||||
Sbjct: 46256 ttgtctttagcttcgtcatgcactccata 46284



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                             
Query: 415   cgtttttgcagcttgtctacctttacccagagcagcaccaaaatattt 462
             |||||||||||| ||||| ||||| ||||| |||||||| || |||||
Sbjct: 47618 cgtttttgcagcctgtcttcctttccccagggcagcaccgaagtattt 47665
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>gb|AY459341.1| Oryza sativa (japonica cultivar-group) clone CL031105.6 R2R3-MYB gene
             region
          Length = 58956

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 56/59 (94%)
 Strand = Plus / Minus

                                                                        
Query: 463   ataggagaggcctgaaggttcgatcatgtagagctgtggcccatccctatcataacctc 521
             ||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 32997 ataggagagccccgaaggttcgatcatgtagagttgtggcccatccctatcataacctc 32939



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                         
Query: 350   atcttggcaacctcaacgatgccttccctgcaggttagctcagaaagcttcaatttctca 409
             ||||| ||||||||||| |||||||| ||||| || ||||||||||| |||| |||||| 
Sbjct: 34111 atctttgcaacctcaacaatgccttctctgcatgtaagctcagaaagattcagtttctct 34052

                   
Query: 410   atctcc 415
             ||||||
Sbjct: 34051 atctcc 34046



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Minus

                                                                         
Query: 257   accttctcgtgctgacggttagattcctcacatacccagctcagttccagctcaaaagat 316
             |||||||| ||||| || || ||||| || |||||||||||||| ||||| |||||   |
Sbjct: 34700 accttctcatgctggcgctttgattcatcgcatacccagctcagctccagttcaaagtct 34641

                                          
Query: 317   ttgtctttcgcttcgtcgtgcacaccata 345
             |||||||| |||||||| ||||| |||||
Sbjct: 34640 ttgtctttagcttcgtcatgcactccata 34612



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                             
Query: 415   cgtttttgcagcttgtctacctttacccagagcagcaccaaaatattt 462
             |||||||||||| ||||| ||||| ||||| |||||||| || |||||
Sbjct: 33278 cgtttttgcagcctgtcttcctttccccagggcagcaccgaagtattt 33231
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 56/59 (94%)
 Strand = Plus / Plus

                                                                           
Query: 463      ataggagaggcctgaaggttcgatcatgtagagctgtggcccatccctatcataacctc 521
                ||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 23979408 ataggagagccccgaaggttcgatcatgtagagttgtggcccatccctatcataacctc 23979466



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                            
Query: 350      atcttggcaacctcaacgatgccttccctgcaggttagctcagaaagcttcaatttctca 409
                ||||| ||||||||||| |||||||| ||||| || ||||||||||| |||| |||||| 
Sbjct: 23978296 atctttgcaacctcaacaatgccttctctgcatgtaagctcagaaagattcagtttctct 23978355

                      
Query: 410      atctcc 415
                ||||||
Sbjct: 23978356 atctcc 23978361



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                            
Query: 257      accttctcgtgctgacggttagattcctcacatacccagctcagttccagctcaaaagat 316
                |||||||| ||||| || || ||||| || |||||||||||||| ||||| |||||   |
Sbjct: 23977707 accttctcatgctggcgctttgattcatcgcatacccagctcagctccagttcaaagtct 23977766

                                             
Query: 317      ttgtctttcgcttcgtcgtgcacaccata 345
                |||||||| |||||||| ||||| |||||
Sbjct: 23977767 ttgtctttagcttcgtcatgcactccata 23977795



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                                
Query: 415      cgtttttgcagcttgtctacctttacccagagcagcaccaaaatattt 462
                |||||||||||| ||||| ||||| ||||| |||||||| || |||||
Sbjct: 23979129 cgtttttgcagcctgtcttcctttccccagggcagcaccgaagtattt 23979176
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 48/49 (97%)
 Strand = Plus / Minus

                                                                 
Query: 473      cctgaaggttcgatcatgtagagctgtggcccatccctatcataacctc 521
                ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34465996 cctgagggttcgatcatgtagagctgtggcccatccctatcataacctc 34465948



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                            
Query: 179      gtctcttcttagtcagcatccatctcttccaacgctgcctgcgctgctgccttggcctgc 238
                ||||| ||||| |||||||||||||| || | ||||||||| |||||  |||||||||||
Sbjct: 34468556 gtctcctcttaatcagcatccatctcctcaagcgctgcctgagctgcaaccttggcctgc 34468497

                            
Query: 239      tccagaagatca 250
                |||| |||||||
Sbjct: 34468496 tccaaaagatca 34468485



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                                
Query: 415      cgtttttgcagcttgtctacctttacccagagcagcaccaaaatattt 462
                |||||||||||| ||||| ||||||||||||||||||||||| |||||
Sbjct: 34466262 cgtttttgcagcctgtcttcctttacccagagcagcaccaaagtattt 34466215



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                           
Query: 350      atcttggcaacctcaacgatgccttccctgcaggttagctcagaaagcttcaatttctc 408
                ||||| |||||||| || |||||||||| |||||| ||||| ||||||||||| |||||
Sbjct: 34467113 atctttgcaacctccacaatgccttcccggcaggtaagctcggaaagcttcaacttctc 34467055



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 219      gcgctgctgccttggcctgc 238
                ||||||||||||||||||||
Sbjct: 33287030 gcgctgctgccttggcctgc 33287011
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>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0468B07
          Length = 169071

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 48/49 (97%)
 Strand = Plus / Minus

                                                               
Query: 473    cctgaaggttcgatcatgtagagctgtggcccatccctatcataacctc 521
              ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148340 cctgagggttcgatcatgtagagctgtggcccatccctatcataacctc 148292



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                          
Query: 179    gtctcttcttagtcagcatccatctcttccaacgctgcctgcgctgctgccttggcctgc 238
              ||||| ||||| |||||||||||||| || | ||||||||| |||||  |||||||||||
Sbjct: 150900 gtctcctcttaatcagcatccatctcctcaagcgctgcctgagctgcaaccttggcctgc 150841

                          
Query: 239    tccagaagatca 250
              |||| |||||||
Sbjct: 150840 tccaaaagatca 150829



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                              
Query: 415    cgtttttgcagcttgtctacctttacccagagcagcaccaaaatattt 462
              |||||||||||| ||||| ||||||||||||||||||||||| |||||
Sbjct: 148606 cgtttttgcagcctgtcttcctttacccagagcagcaccaaagtattt 148559



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                         
Query: 350    atcttggcaacctcaacgatgccttccctgcaggttagctcagaaagcttcaatttctc 408
              ||||| |||||||| || |||||||||| |||||| ||||| ||||||||||| |||||
Sbjct: 149457 atctttgcaacctccacaatgccttcccggcaggtaagctcggaaagcttcaacttctc 149399
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>dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0425G02
          Length = 155432

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 48/49 (97%)
 Strand = Plus / Minus

                                                              
Query: 473   cctgaaggttcgatcatgtagagctgtggcccatccctatcataacctc 521
             ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41715 cctgagggttcgatcatgtagagctgtggcccatccctatcataacctc 41667



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                         
Query: 179   gtctcttcttagtcagcatccatctcttccaacgctgcctgcgctgctgccttggcctgc 238
             ||||| ||||| |||||||||||||| || | ||||||||| |||||  |||||||||||
Sbjct: 44275 gtctcctcttaatcagcatccatctcctcaagcgctgcctgagctgcaaccttggcctgc 44216

                         
Query: 239   tccagaagatca 250
             |||| |||||||
Sbjct: 44215 tccaaaagatca 44204



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                             
Query: 415   cgtttttgcagcttgtctacctttacccagagcagcaccaaaatattt 462
             |||||||||||| ||||| ||||||||||||||||||||||| |||||
Sbjct: 41981 cgtttttgcagcctgtcttcctttacccagagcagcaccaaagtattt 41934



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                        
Query: 350   atcttggcaacctcaacgatgccttccctgcaggttagctcagaaagcttcaatttctc 408
             ||||| |||||||| || |||||||||| |||||| ||||| ||||||||||| |||||
Sbjct: 42832 atctttgcaacctccacaatgccttcccggcaggtaagctcggaaagcttcaacttctc 42774
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>ref|NM_128260.3| Arabidopsis thaliana PAG1; endopeptidase/ peptidase/ threonine
           endopeptidase AT2G27020 (PAG1) mRNA, complete cds
          Length = 1024

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 98/121 (80%)
 Strand = Plus / Minus

                                                                       
Query: 401 aatttctcaatctccgtttttgcagcttgtctacctttacccagagcagcaccaaaatat 460
           ||||||||||| |||||||| ||||||||  | ||||| || |  || |||||||| |||
Sbjct: 654 aatttctcaatttccgttttggcagcttgctttcctttgccaatggccgcaccaaagtat 595

                                                                       
Query: 461 ttataggagaggcctgaaggttcgatcatgtagagctgtggcccatccctatcataacct 520
            |||| || | |||||| ||||| |||||||| |  || || ||||| ||||||||||||
Sbjct: 594 ctatatgatatgcctgatggttcaatcatgtacaattgaggtccatctctatcataacct 535

            
Query: 521 c 521
           |
Sbjct: 534 c 534
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>emb|Y13693.1|ATY13693 Arabidopsis thaliana mRNA for proteasome subunit prc8
          Length = 958

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 98/121 (80%)
 Strand = Plus / Minus

                                                                       
Query: 401 aatttctcaatctccgtttttgcagcttgtctacctttacccagagcagcaccaaaatat 460
           ||||||||||| |||||||| ||||||||  | ||||| || |  || |||||||| |||
Sbjct: 579 aatttctcaatttccgttttggcagcttgctttcctttgccaatggccgcaccaaagtat 520

                                                                       
Query: 461 ttataggagaggcctgaaggttcgatcatgtagagctgtggcccatccctatcataacct 520
            |||| || | |||||| ||||| |||||||| |  || || ||||| ||||||||||||
Sbjct: 519 ctatatgatatgcctgatggttcaatcatgtacaattgaggtccatctctatcataacct 460

            
Query: 521 c 521
           |
Sbjct: 459 c 459
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>gb|AY124806.1| Arabidopsis thaliana At2g27020/T20P8.7 mRNA, complete cds
          Length = 750

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 98/121 (80%)
 Strand = Plus / Minus

                                                                       
Query: 401 aatttctcaatctccgtttttgcagcttgtctacctttacccagagcagcaccaaaatat 460
           ||||||||||| |||||||| ||||||||  | ||||| || |  || |||||||| |||
Sbjct: 536 aatttctcaatttccgttttggcagcttgctttcctttgccaatggccgcaccaaagtat 477

                                                                       
Query: 461 ttataggagaggcctgaaggttcgatcatgtagagctgtggcccatccctatcataacct 520
            |||| || | |||||| ||||| |||||||| |  || || ||||| ||||||||||||
Sbjct: 476 ctatatgatatgcctgatggttcaatcatgtacaattgaggtccatctctatcataacct 417

            
Query: 521 c 521
           |
Sbjct: 416 c 416
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>gb|AF375455.1| Arabidopsis thaliana At2g27020/T20P8.7 mRNA, complete cds
          Length = 935

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 98/121 (80%)
 Strand = Plus / Minus

                                                                       
Query: 401 aatttctcaatctccgtttttgcagcttgtctacctttacccagagcagcaccaaaatat 460
           ||||||||||| |||||||| ||||||||  | ||||| || |  || |||||||| |||
Sbjct: 569 aatttctcaatttccgttttggcagcttgctttcctttgccaatggccgcaccaaagtat 510

                                                                       
Query: 461 ttataggagaggcctgaaggttcgatcatgtagagctgtggcccatccctatcataacct 520
            |||| || | |||||| ||||| |||||||| |  || || ||||| ||||||||||||
Sbjct: 509 ctatatgatatgcctgatggttcaatcatgtacaattgaggtccatctctatcataacct 450

            
Query: 521 c 521
           |
Sbjct: 449 c 449
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>gb|AY088609.1| Arabidopsis thaliana clone 8342 mRNA, complete sequence
          Length = 1022

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 98/121 (80%)
 Strand = Plus / Minus

                                                                       
Query: 401 aatttctcaatctccgtttttgcagcttgtctacctttacccagagcagcaccaaaatat 460
           ||||||||||| |||||||| ||||||||  | ||||| || |  || |||||||| |||
Sbjct: 657 aatttctcaatttccgttttggcagcttgctttcctttgccaatggccgcaccaaagtat 598

                                                                       
Query: 461 ttataggagaggcctgaaggttcgatcatgtagagctgtggcccatccctatcataacct 520
            |||| || | |||||| ||||| |||||||| |  || || ||||| ||||||||||||
Sbjct: 597 ctatatgatatgcctgatggttcaatcatgtacaattgaggtccatctctatcataacct 538

            
Query: 521 c 521
           |
Sbjct: 537 c 537
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>gb|AF043528.1|AF043528 Arabidopsis thaliana 20S proteasome subunit PAG1 (PAG1) mRNA,
           complete cds
          Length = 958

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 98/121 (80%)
 Strand = Plus / Minus

                                                                       
Query: 401 aatttctcaatctccgtttttgcagcttgtctacctttacccagagcagcaccaaaatat 460
           ||||||||||| |||||||| ||||||||  | ||||| || |  || |||||||| |||
Sbjct: 579 aatttctcaatttccgttttggcagcttgctttcctttgccaatggccgcaccaaagtat 520

                                                                       
Query: 461 ttataggagaggcctgaaggttcgatcatgtagagctgtggcccatccctatcataacct 520
            |||| || | |||||| ||||| |||||||| |  || || ||||| ||||||||||||
Sbjct: 519 ctatatgatatgcctgatggttcaatcatgtacaattgaggtccatctctatcataacct 460

            
Query: 521 c 521
           |
Sbjct: 459 c 459
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>emb|BX819273.1|CNS0A9VK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB62ZH07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 837

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 97/121 (80%)
 Strand = Plus / Minus

                                                                       
Query: 401 aatttctcaatctccgtttttgcagcttgtctacctttacccagagcagcaccaaaatat 460
           ||||||||||| |||||||| ||||||||  | ||||| || |  || |||||||| |||
Sbjct: 467 aatttctcaatttccgttttggcagcttgctttcctttgccaatggccgcaccaaagtat 408

                                                                       
Query: 461 ttataggagaggcctgaaggttcgatcatgtagagctgtggcccatccctatcataacct 520
            ||||  | | |||||| ||||| |||||||| |  || || ||||| ||||||||||||
Sbjct: 407 ctatatcatatgcctgatggttcaatcatgtacaattgaggtccatctctatcataacct 348

            
Query: 521 c 521
           |
Sbjct: 347 c 347
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>gb|BT013996.1| Lycopersicon esculentum clone 133043F, mRNA sequence
          Length = 1134

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 90/112 (80%)
 Strand = Plus / Minus

                                                                       
Query: 254 ggaaccttctcgtgctgacggttagattcctcacatacccagctcagttccagctcaaaa 313
           ||||||||||  || || |||||||| || |||||||||||||||| ||| || ||||| 
Sbjct: 787 ggaaccttctgatgttggcggttagactcatcacatacccagctcatttcaagttcaaat 728

                                                               
Query: 314 gatttgtctttcgcttcgtcgtgcacaccataaattatcttggcaacctcaa 365
           |  |||||||| || || || || || || |||||||| || || |||||||
Sbjct: 727 gccttgtcttttgcctcatcatgtactccgtaaattatttttgctacctcaa 676
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>emb|AJ291738.1|NTA291738 Nicotiana tabacum mRNA for putative alpha7 proteasome subunit (a7
           gene)
          Length = 1047

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 67/82 (81%)
 Strand = Plus / Minus

                                                                       
Query: 389 tcagaaagcttcaatttctcaatctccgtttttgcagcttgtctacctttacccagagca 448
           ||||| |||||||| || ||||| || || || ||||||||||| || || || | ||||
Sbjct: 638 tcagagagcttcaacttttcaatttctgtcttagcagcttgtctgcccttcccaatagca 579

                                 
Query: 449 gcaccaaaatatttataggaga 470
           |||||||| ||  |||||||||
Sbjct: 578 gcaccaaagtacctataggaga 557
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>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome
          Length = 3184243

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 222     ctgctgccttggcctgctccag 243
               ||||||||||||||||||||||
Sbjct: 1904782 ctgctgccttggcctgctccag 1904761
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>ref|XM_642011.1| Dictyostelium discoideum proteasome C8 (DDB0191264), partial mRNA
          Length = 747

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 419 tttgcagcttgtctacctttacccagagcagcaccaaaata 459
           |||||||||||| |||||||||| || | |||||| |||||
Sbjct: 518 tttgcagcttgtttacctttaccaagtgaagcaccgaaata 478
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>gb|AC168148.15| Medicago truncatula clone mth2-80b11, complete sequence
          Length = 111889

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 388    ctcagaaagcttcaatttctc 408
              |||||||||||||||||||||
Sbjct: 108662 ctcagaaagcttcaatttctc 108642
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>gb|AC152407.19| Medicago truncatula clone mth2-77l23, complete sequence
          Length = 113470

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 388    ctcagaaagcttcaatttctc 408
              |||||||||||||||||||||
Sbjct: 102100 ctcagaaagcttcaatttctc 102120
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>gb|AF369906.1| Sorghum bicolor clone BAC10J22 Sbb3766 sequence
          Length = 152439

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 355   ggcaacctcaacgatgccttc 375
             |||||||||||||||||||||
Sbjct: 55374 ggcaacctcaacgatgccttc 55394
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>gb|U61988.1|DDU61988 Dictyostelium discoideum PrtD (prtD) mRNA, complete cds
          Length = 858

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 419 tttgcagcttgtctacctttacccagagcagcaccaaaata 459
           |||||||||||| |||||||||| || | |||||| |||||
Sbjct: 569 tttgcagcttgtttacctttaccaagtgaagcaccgaaata 529
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>gb|AC168217.2| Mus musculus BAC clone RP24-498P8 from chromosome 9, complete sequence
          Length = 171426

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 245    agatcactcggaaccttctc 264
              ||||||||||||||||||||
Sbjct: 145719 agatcactcggaaccttctc 145738
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>gb|BC097109.1| Danio rerio zgc:114044, mRNA (cDNA clone MGC:114044 IMAGE:7416126),
           complete cds
          Length = 996

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 290 acccagctcagttccagctcaaaagatttgtctttc 325
           |||||||| || ||||||||||| | ||||||||||
Sbjct: 748 acccagctgagctccagctcaaaggctttgtctttc 713



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 476 gaaggttcgatcatgtagagctgtggcccatc 507
           ||||| |||| ||||||||||||||| |||||
Sbjct: 562 gaagggtcgaccatgtagagctgtgggccatc 531
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>ref|NM_001030187.1| Danio rerio zgc:114044 (zgc:114044), mRNA
          Length = 996

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 290 acccagctcagttccagctcaaaagatttgtctttc 325
           |||||||| || ||||||||||| | ||||||||||
Sbjct: 748 acccagctgagctccagctcaaaggctttgtctttc 713



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 476 gaaggttcgatcatgtagagctgtggcccatc 507
           ||||| |||| ||||||||||||||| |||||
Sbjct: 562 gaagggtcgaccatgtagagctgtgggccatc 531
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 328     ttcgtcgtgcacaccataaa 347
               ||||||||||||||||||||
Sbjct: 2089197 ttcgtcgtgcacaccataaa 2089216
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>emb|AL353764.9| Human DNA sequence from clone RP11-440G5 on chromosome 9 Contains the
             NFIL3 gene for interleukin 3 regulated nuclear factor, a
             novel gene and two CpG islands, complete sequence
          Length = 170898

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 417   tttttgcagcttgtctacctttac 440
             |||||||| |||||||||||||||
Sbjct: 96884 tttttgcatcttgtctacctttac 96907
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>emb|AJ586898.1| Platanus acerifolia partial mRNA for polygalacturonase (plaa2 gene)
          Length = 1395

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 84   aacaacaacctgagctagtt 103
            ||||||||||||||||||||
Sbjct: 1290 aacaacaacctgagctagtt 1271
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>gb|AC092997.6| Homo sapiens 3 BAC RP11-711L14 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 151059

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 99    tagtttttggaactcaaatgatat 122
             ||||||||||||||||||| ||||
Sbjct: 36166 tagtttttggaactcaaattatat 36189
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>gb|BC113948.1| Rattus norvegicus cDNA clone MGC:124733 IMAGE:7937870, complete cds
          Length = 6088

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 206  tccaacgctgcctgcgctgc 225
            ||||||||||||||||||||
Sbjct: 4410 tccaacgctgcctgcgctgc 4429
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>emb|BX511180.7| Zebrafish DNA sequence from clone CH211-221H1 in linkage group 3,
             complete sequence
          Length = 155448

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    tagtttttggaactcaaatg 118
             ||||||||||||||||||||
Sbjct: 52356 tagtttttggaactcaaatg 52337
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>ref|XM_340818.2| PREDICTED: Rattus norvegicus myosin, heavy polypeptide 4, skeletal
            muscle (predicted) (Myh4_predicted), mRNA
          Length = 5817

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 206  tccaacgctgcctgcgctgc 225
            ||||||||||||||||||||
Sbjct: 4327 tccaacgctgcctgcgctgc 4346
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>dbj|AP003406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1070A12
          Length = 148449

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   gcgctgctgccttggcctgc 238
             ||||||||||||||||||||
Sbjct: 80277 gcgctgctgccttggcctgc 80258
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>emb|Z69793.1|CER03A10 Caenorhabditis elegans Cosmid R03A10, complete sequence
          Length = 40594

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 101  gtttttggaactcaaatgatattc 124
            ||||||||||| ||||||||||||
Sbjct: 4544 gtttttggaacacaaatgatattc 4567
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>gb|AC137678.11| Mus musculus chromosome 9, clone RP24-484G16, complete sequence
          Length = 172337

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 245    agatcactcggaaccttctc 264
              ||||||||||||||||||||
Sbjct: 141992 agatcactcggaaccttctc 141973
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>emb|BX119994.7| Mouse DNA sequence from clone RP23-272G10 on chromosome X, complete
             sequence
          Length = 174006

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 122   ttcgtcaaccggtcctgtatctct 145
             |||||||||| |||||||||||||
Sbjct: 47549 ttcgtcaacccgtcctgtatctct 47572
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>gb|AC154374.1| Mus musculus BAC clone RP23-81F24 from 9, complete sequence
          Length = 169272

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 227   gccttggcctgctccagaagatca 250
             ||||||||||| ||||||||||||
Sbjct: 71028 gccttggcctgatccagaagatca 71005
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>gb|M98497.1|CHKRHOPR Chicken rhodopsin gene, promoter region
          Length = 1925

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 373 ttccctgcaggttagctcag 392
           ||||||||||||||||||||
Sbjct: 268 ttccctgcaggttagctcag 249


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,578,969
Number of Sequences: 3902068
Number of extensions: 4578969
Number of successful extensions: 86532
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86321
Number of HSP's gapped (non-prelim): 203
length of query: 521
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 498
effective length of database: 17,143,297,704
effective search space: 8537362256592
effective search space used: 8537362256592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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