| Clone Name | rbaal17p15 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | MAD14_ORYSA (Q7Y023) MADS-box transcription factor 14 (OsMADS14)... | 66 | 8e-11 | 2 | MAD15_ORYSA (Q6Q9I2) MADS-box transcription factor 15 (OsMADS15)... | 32 | 1.2 | 3 | MYC_DROME (Q9W4S7) Myc protein (dMyc1) (dMyc) (Diminutive protein) | 31 | 2.7 | 4 | FCTA_STRAW (Q82M40) Probable formyl-coenzyme A transferase (EC 2... | 29 | 7.9 | 5 | LOZEN_DROME (Q9W349) Protein lozenge | 29 | 7.9 |
|---|
>MAD14_ORYSA (Q7Y023) MADS-box transcription factor 14 (OsMADS14) (Protein| APETALA1-like B) (Protein AGAMOUS-like 10) (FDRMADS6) (RMADS211) Length = 246 Score = 65.9 bits (159), Expect = 8e-11 Identities = 38/77 (49%), Positives = 43/77 (55%), Gaps = 2/77 (2%) Frame = -1 Query: 556 KELVEKQKXXXXXXXXXXXX--XXXXXXSFMMRDAPPVADTSNHPAAAGERAEDVAVQPQ 383 KELVEKQK SFMMR+A P + SN+PAAAGER EDVA Sbjct: 170 KELVEKQKVQKQQVQWDQTQPQTSSSSSSFMMREALPTTNISNYPAAAGERIEDVAAGQP 229 Query: 382 VPLRTALPLWMVSHING 332 +R LP WM+SHING Sbjct: 230 QHVRIGLPPWMLSHING 246
>MAD15_ORYSA (Q6Q9I2) MADS-box transcription factor 15 (OsMADS15) (Protein| APETALA1-like A) (FDRMADS3) (RMADS215) Length = 267 Score = 32.0 bits (71), Expect = 1.2 Identities = 21/42 (50%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Frame = -1 Query: 457 PPVADTSNHPAAAGERAEDVAVQPQVPLRTA-LPLWMVSHIN 335 PPV + AAA A VA Q QV LR LP WM+SH+N Sbjct: 228 PPVMMGERNDAAA---AAAVAAQGQVQLRIGGLPPWMLSHLN 266
>MYC_DROME (Q9W4S7) Myc protein (dMyc1) (dMyc) (Diminutive protein)| Length = 717 Score = 30.8 bits (68), Expect = 2.7 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 12/62 (19%) Frame = +3 Query: 33 IHRNNTQEQRVSSKVENSSL-MLHINYMVDYSYSHL-----------SPGGKETEVDEVK 176 I NN ++K++N+S MLH+ ++ D+SY+ +P + E+D V Sbjct: 358 ITTNNNNSNNKNNKLKNNSNGMLHMMHITDHSYTRCNDMVDDGPNLETPSDSDEEIDVVS 417 Query: 177 YT 182 YT Sbjct: 418 YT 419
>FCTA_STRAW (Q82M40) Probable formyl-coenzyme A transferase (EC 2.8.3.16)| (Formyl-CoA transferase) Length = 409 Score = 29.3 bits (64), Expect = 7.9 Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 6/48 (12%) Frame = +1 Query: 265 PGWPVQLVTR-TE*YAYM-----GWKPFSR*CGSPSTVEAPSGVGPEA 390 PGW V+ Y Y+ GWKP S G P + P PEA Sbjct: 245 PGWAVKCAPGGPNDYVYVIVQPVGWKPLSELIGRPELADDPEWATPEA 292
>LOZEN_DROME (Q9W349) Protein lozenge| Length = 826 Score = 29.3 bits (64), Expect = 7.9 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = -1 Query: 454 PVADTSNHPAAAGERAEDVAVQPQVPLRTALPL 356 P A S H AAGE D+A Q + L+ LPL Sbjct: 23 PSASPSGHTGAAGESQLDLASQTESQLQLGLPL 55 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,141,740 Number of Sequences: 219361 Number of extensions: 1670768 Number of successful extensions: 4000 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 3860 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3999 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4545742239 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)