>gb|AC124774.4| Mus musculus BAC clone RP23-49E5 from 15, complete sequence
          Length = 227514

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 86    caaacttcagtaatagaacatgg 108
             |||||||||||||||||||||||
Sbjct: 69558 caaacttcagtaatagaacatgg 69580

>ref|XM_445548.1| Candida glabrata CBS138, CAGL0D03036g partial mRNA
          Length = 1869

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 415 cgtgcatttatttctgctcttt 436
           ||||||||||||||||||||||
Sbjct: 907 cgtgcatttatttctgctcttt 928

>emb|CR380950.1| Candida glabrata strain CBS138 chromosome D complete sequence
          Length = 651701

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 415    cgtgcatttatttctgctcttt 436
              ||||||||||||||||||||||
Sbjct: 315686 cgtgcatttatttctgctcttt 315665

>gb|AC146759.29| Medicago truncatula clone mth2-173e19, complete sequence
          Length = 133602

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 475   ctttgtctctgttgatattta 495
             |||||||||||||||||||||
Sbjct: 55276 ctttgtctctgttgatattta 55256

>emb|AL607023.3| Human DNA sequence from clone RP11-65E10 on chromosome 10 Contains part
             of the gene for alpha-catenin-like protein (MGC26194)
             (VR22), complete sequence
          Length = 132396

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 449   ggctatttctccttgccttat 469
             |||||||||||||||||||||
Sbjct: 47685 ggctatttctccttgccttat 47665

>emb|AL356454.15| Human DNA sequence from clone RP11-458J24 on chromosome 6, complete
             sequence
          Length = 174333

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 489   atatttaacttgtttaatgct 509
             |||||||||||||||||||||
Sbjct: 56132 atatttaacttgtttaatgct 56152

>emb|Z97348.1|PFMAL3P1 Plasmodium falciparum MAL3P1, complete sequence
          Length = 65691

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 284   atatatttttacttgcttccc 304
             |||||||||||||||||||||
Sbjct: 39722 atatatttttacttgcttccc 39702

>gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome
          Length = 2225959

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 377     tatcttctatagtcttatttt 397
               |||||||||||||||||||||
Sbjct: 1559178 tatcttctatagtcttatttt 1559198

>gb|AC009498.4| Homo sapiens BAC clone RP11-507C18 from 2, complete sequence
          Length = 199954

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 447    taggctatttctccttgcctt 467
              |||||||||||||||||||||
Sbjct: 105333 taggctatttctccttgcctt 105313

>gb|AC009533.10| Homo sapiens 12 BAC RP11-22B23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 162572

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 388   gtcttattttgtctagatgctcttc 412
             ||||| |||||||||||||||||||
Sbjct: 53003 gtctttttttgtctagatgctcttc 53027

>emb|AL807831.6| Mouse DNA sequence from clone RP23-146I17 on chromosome X, complete
             sequence
          Length = 203118

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 382   tctatagtcttattttgtctagatg 406
             ||||||||||||| |||||||||||
Sbjct: 66089 tctatagtcttatattgtctagatg 66113

>gb|AC154597.2| Mus musculus BAC clone RP23-355G2 from chromosome 14, complete sequence
          Length = 201544

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 317    tcatctcttgcctcttctttgttg 340
              |||||||||||||||| |||||||
Sbjct: 176818 tcatctcttgcctcttttttgttg 176795

>gb|AC131920.7| Mus musculus chromosome 14, clone RP23-450N9, complete sequence
          Length = 201436

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 53     acaattgactgacaaatata 72
              ||||||||||||||||||||
Sbjct: 183700 acaattgactgacaaatata 183719

>gb|AC124400.4| Mus musculus BAC clone RP24-357O21 from chromosome 14, complete
             sequence
          Length = 191219

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 317   tcatctcttgcctcttctttgttg 340
             |||||||||||||||| |||||||
Sbjct: 34291 tcatctcttgcctcttttttgttg 34268

>gb|AC129851.5| Homo sapiens X BAC RP11-669P14 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 166653

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 97     aatagaacatggtgattcattaga 120
              |||||||| |||||||||||||||
Sbjct: 107590 aatagaacttggtgattcattaga 107613

>ref|XM_649117.1| Entamoeba histolytica HM-1:IMSS conserved hypothetical protein
            (60.t00012) partial mRNA
          Length = 3528

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 489  atatttaacttgtttaatgcttgc 512
            |||||||||| |||||||||||||
Sbjct: 2304 atatttaactggtttaatgcttgc 2327

>gb|AC123541.3| Oryctolagus cuniculus clone LB1-184A7, complete sequence
          Length = 190901

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 475   ctttgtctctgttgatattt 494
             ||||||||||||||||||||
Sbjct: 25749 ctttgtctctgttgatattt 25768

>emb|AL589987.25| Human DNA sequence from clone RP11-364B14 on chromosome X Contains a
             novel gene, a heterogeneous nuclear ribonucleoprotein A3
             (HNRPA3) pseudogene, a novel pseudogene and a CpG island,
             complete sequence
          Length = 143770

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 417   tgcatttatttctgctcttt 436
             ||||||||||||||||||||
Sbjct: 55660 tgcatttatttctgctcttt 55641

>emb|AL513332.9| Human DNA sequence from clone RP11-58B8 on chromosome 9, complete
             sequence
          Length = 124531

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 475   ctttgtctctgttgatattt 494
             ||||||||||||||||||||
Sbjct: 72754 ctttgtctctgttgatattt 72773

>gb|AC101711.7| Mus musculus, clone RP23-279K17, complete sequence
          Length = 174802

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 53     acaattgactgacaaatata 72
              ||||||||||||||||||||
Sbjct: 116452 acaattgactgacaaatata 116471

>emb|CR847825.6| Zebrafish DNA sequence from clone DKEY-98D20 in linkage group 6, complete
              sequence
          Length = 113362

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     acacatgcaaacttcagtaa 98
              ||||||||||||||||||||
Sbjct: 100836 acacatgcaaacttcagtaa 100817

>gb|AC104322.4| Oryza sativa chromosome 10 BAC OSJNBb0005F01 genomic sequence,
            complete sequence
          Length = 151428

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 304  cttctacaggcattcatctcttgcctct 331
            ||||||| |||||||| |||||||||||
Sbjct: 5103 cttctacgggcattcaactcttgcctct 5130

>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 594     caggttgatgataaactcat 613
               ||||||||||||||||||||
Sbjct: 4278231 caggttgatgataaactcat 4278212

>gb|AC105746.10| Oryza sativa chromosome 10 BAC OSJNBb0086I08 genomic sequence, complete
             sequence
          Length = 126842

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 304   cttctacaggcattcatctcttgcctct 331
             ||||||| |||||||| |||||||||||
Sbjct: 80363 cttctacgggcattcaactcttgcctct 80390

>emb|BX649211.10| Zebrafish DNA sequence from clone DKEY-215O18 in linkage group 3,
             complete sequence
          Length = 125992

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 558   tgtagggttttctccgggtg 577
             ||||||||||||||||||||
Sbjct: 75919 tgtagggttttctccgggtg 75938

>gb|AC091237.6| Mus musculus Strain C57BL7/J Chromosome 14 RP23-470F15, complete sequence
          Length = 177104

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 493    ttaacttgtttaatgcttgc 512
              ||||||||||||||||||||
Sbjct: 126905 ttaacttgtttaatgcttgc 126886

>gb|DP000006.1| Oryctolagus cuniculus target 1 genomic scaffold
          Length = 1889755

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 475     ctttgtctctgttgatattt 494
               ||||||||||||||||||||
Sbjct: 1724603 ctttgtctctgttgatattt 1724622

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 304     cttctacaggcattcatctcttgcctct 331
               ||||||| |||||||| |||||||||||
Sbjct: 6070098 cttctacgggcattcaactcttgcctct 6070125



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 304     cttctacaggcattcatctcttgcctct 331
               ||||||| |||||||| |||||||||||
Sbjct: 5586759 cttctacgggcattcaactcttgcctct 5586732

>gb|AC122152.3| Oryctolagus cuniculus clone LB1-297M16, complete sequence
          Length = 189392

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 475    ctttgtctctgttgatattt 494
              ||||||||||||||||||||
Sbjct: 176400 ctttgtctctgttgatattt 176419

>gb|AC107301.10| Homo sapiens 3 BAC RP11-544A22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 188000

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 419    catttatttctgctctttgc 438
              ||||||||||||||||||||
Sbjct: 182126 catttatttctgctctttgc 182145

>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 594     caggttgatgataaactcat 613
               ||||||||||||||||||||
Sbjct: 4372303 caggttgatgataaactcat 4372284

>gb|AC103897.3| Papio anubis clone RP41-461D5, complete sequence
          Length = 156269

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    acatgcaaacttcagtaata 100
             ||||||||||||||||||||
Sbjct: 50093 acatgcaaacttcagtaata 50074

>emb|BX649386.4| Zebrafish DNA sequence from clone RP71-18A24 in linkage group 4,
             complete sequence
          Length = 161671

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 486   ttgatatttaacttgtttaa 505
             ||||||||||||||||||||
Sbjct: 42824 ttgatatttaacttgtttaa 42805

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 304     cttctacaggcattcatctcttgcctct 331
               ||||||| |||||||| |||||||||||
Sbjct: 6071284 cttctacgggcattcaactcttgcctct 6071311



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 304     cttctacaggcattcatctcttgcctct 331
               ||||||| |||||||| |||||||||||
Sbjct: 5587946 cttctacgggcattcaactcttgcctct 5587919

>emb|BX908759.27| Zebrafish DNA sequence from clone DKEY-27J5 in linkage group 1,
             complete sequence
          Length = 231898

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    attgactgacaaatatagat 75
             ||||||||||||||||||||
Sbjct: 75428 attgactgacaaatatagat 75447


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,287,730
Number of Sequences: 3902068
Number of extensions: 6287730
Number of successful extensions: 119078
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 118876
Number of HSP's gapped (non-prelim): 202
length of query: 673
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 650
effective length of database: 17,143,297,704
effective search space: 11143143507600
effective search space used: 11143143507600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)